Carg17557 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17557
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Signal peptidase complex subunit 3
Location	Cucurbita_argyrosperma_scaffold_183 : 211101 .. 213766 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCCTCCTCCTCCTCCTCTTCCTCCTCTCTCGCTGCGAGGAACCCATTTGAAGAATGCATTCATTTGGGTATCGAGCCAACGCTCTGGTGACCTTTGCGGCCACCATACTTGCTATCATTTGTGCTTTGGCTTCGTTTTCTGATACCCTTAAATCGCCTTCACCCACGGCACAAGTTCAGGTCTCTCTCATCTCTTTCTGGGTTTTTTTGTTTTCTCTCTTCCTTTTGGATCTGTGGTTTGAATTCTCTTGGATTTTGGTTGGTTTTTGATACTCATTTGGTGATTTGATTTGATACCCATTAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTATGGTTTCATTGGCTTTTCTCTTTGAGTTCTTGGGAATTTGTGTGAGGAGAGGGATTTTGAGGTTGATTGTGTAGTTGATTTCATTTTGAGAACGTGATGAGATTTACCATCTTTTGGTGTTCATGGTTTGTTCTTTGTTGTGATGAATTGGGAGATTCTTGTATAGGAAAATGATTGAGAATGGCTGGGGAGAAGACTCAATAGGTTAGTGTGAGATCCCACGTCGGTTGGAGAGGGGAAGGAAACATTCCGTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACCGCGAGATTGACGGTGATATGTAACGGGCAAAAGCGGACAATATCCACTAACGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAAACAGACACCGGACAATGTGTCAGCGAGGACGCTGGACCTCAGGGAGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGAACGAAAGATTCCTTATAAGGGTGTGGAAACTTCTCCCTAACAGACACTTTTTAAAAAATTGTGAGGCTGACGATGATACATAACGGGCCAAAATAGACAAAATCTACTAGCGGTGGGCTTGAGTTGTTACAAATGGTATCAGAGCCATATAAACACGGGGGAATGTGCCAGCGAGGACTCTTGGCCTCAAAGGATGGTAGATTGTGATATTTCACATTGGTTGGAGGGAGGAACGAAAGATTCCTTATAAGGGTGTAGAAACCTCTCCCTAGCACACGCGTTTTAAAAATCGTGAGACTAACGGTGATACATAATGAGCTAAGGCAGACAATATCTACTAGCGGTGGGCTGAAGCTGTTACAAATGGTATCAGAGCCAAACAAACACAAGGCAAGGTGTCAGCGAGGACGTTGGGCCTCAAAGAGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGACGAAACATTCCTTATAAGGGTGTAGAAACCTCTTCCTAACAGACGTGTTTTAAAAACCGTGAGGCTAACGGCTATACGTAACAAGCCAAAGCGGACAATATCTACTAGCAGTGGGTTTAGACCGTAAAAAATGGCCTCCTTCAGTTCTTCACAGCACTTTTTTCAACCAATGTTCTTAATAACTCGCTATAACCAAAGAAAAGTAGTCAATATTTGTTGTTGATAAGGGTAAATGAGATTCTTTGCTAGAGCAGCTAATAAGCTTAGAATGTGCCTTCTTGTTGCAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTGCAGTGGCAACCTATTATTCTCCTCTTTCTTTATGGTGTTCTCATAGTCCTTAGCGGTCTGGTTGGTTAACTATGATTAGGCTCCTCAACTCTAGCAAAGACTTAACTCATAAAGTACCCTAACGTTCACGCCAAACGCTAAGCCATTCTCTCCGACTCTGTTACTACTAAGCCATTGTCCCCCAACTCTCATACTTTGTTTAGCTTGAGTTAATAGTGTTTTAAGGAGCAATTAGATTAGATGATGATGTTCTTTCTCCAATTTTGCTCGCTTGGAATCAGGCTTAAATTCTAGGCCCTCCACCTTTTCTTGTTTACTGAGCGAGGAAATGAACCTCTACGACAGATATATGATAAGGTAACACCTAAAATGACAGTCACCGTGTAGAGAGCAACTGAAAGGGTTGTGTTTTCCTCCATCTTGAGGATCGAAATTTCTTGTGTTGTGTCCGTGTCAATAGTTAGATCCTAATTCGGCTACCTCTCCCCAAGGCCGAACACATTTTGCCTAGGGTGATCACTGATCATTGGTGGCTTCTTTGCCTCTATTTGTGCAACAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGGTCTATCTCTATTTCCTATTACAATATGTTCTTAACCCGCTGGTGAGTTTCGTCTCTTTCAGCAACTCGACGTGACCTAAATTTCCAGAATTTCATTTACAGATCTCACTCTGGGACAGTATCATACCCTCCAAAGATAGGGCCAAGTTTCGAATCCATACTTCAAACAAGTATCGGTTCGTCGATCAGGTTCGCACCTCCTATCCTTTTGCACAACTTTGCCAACCAATCTATGATGATTATATGCTTTATCCTAGAGTGACAAAGTTGTATTTCTCCTTATGCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTCTGGATACCGCTTGCCACAAGAATATAGATGA

mRNA sequence

CCCTCCTCCTCCTCCTCCTCTTCCTCCTCTCTCGCTGCGAGGAACCCATTTGAAGAATGCATTCATTTGGGTATCGAGCCAACGCTCTGGTGACCTTTGCGGCCACCATACTTGCTATCATTTGTGCTTTGGCTTCGTTTTCTGATACCCTTAAATCGCCTTCACCCACGGCACAAGTTCAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTCTGGGACAGTATCATACCCTCCAAAGATAGGGCCAAGTTTCGAATCCATACTTCAAACAAGTATCGGTTCGTCGATCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTCTGGATACCGCTTGCCACAAGAATATAGATGA

Coding sequence (CDS)

ATGCATTCATTTGGGTATCGAGCCAACGCTCTGGTGACCTTTGCGGCCACCATACTTGCTATCATTTGTGCTTTGGCTTCGTTTTCTGATACCCTTAAATCGCCTTCACCCACGGCACAAGTTCAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTCTGGGACAGTATCATACCCTCCAAAGATAGGGCCAAGTTTCGAATCCATACTTCAAACAAGTATCGGTTCGTCGATCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTCTGGATACCGCTTGCCACAAGAATATAGATGA

Protein sequence

MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNKYRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR

Homology

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BLAST of Carg17557 vs. NCBI nr
Match: XP_023521352.1 (signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023521353.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023521357.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023521358.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023538075.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023538076.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.7 bits (857), Expect = 1.8e-88
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANALVTFAATILAIIC LASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGYRANALVTFAATILAIICGLASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKD AKFRIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDSAKFRIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 167

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BLAST of Carg17557 vs. NCBI nr
Match: XP_022938136.1 (signal peptidase complex subunit 3B-like [Cucurbita moschata] >XP_022938137.1 signal peptidase complex subunit 3B-like [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 3.9e-88
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKD AKFRIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDSAKFRIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQG NLRGKEFN+TLHWHVMPKTGKMFANKLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGKNLRGKEFNVTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 167

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BLAST of Carg17557 vs. NCBI nr
Match: XP_022965984.1 (signal peptidase complex subunit 3B-like [Cucurbita maxima])

HSP 1 Score: 327.0 bits (837), Expect = 3.7e-86
Identity = 162/167 (97.01%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANALVTFAATILAIICALASFSDTLKSPSP AQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSK  AKF+IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVM GYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 167

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BLAST of Carg17557 vs. NCBI nr
Match: XP_008454895.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal peptidase protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 321.6 bits (823), Expect = 1.5e-84
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG+RANAL+TFAATILA+ICALASFSDTL SPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWD I+PSK+ AKF+IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFA+KLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

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BLAST of Carg17557 vs. NCBI nr
Match: XP_022150797.1 (signal peptidase complex subunit 3B-like [Momordica charantia])

HSP 1 Score: 319.7 bits (818), Expect = 5.9e-84
Identity = 153/167 (91.62%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFAATILA++CA+ASFSDTL SPSPTAQVQVLSINWFQNQP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVVCAMASFSDTLNSPSPTAQVQVLSINWFQNQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           +TLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK+ AKF+IHTSNK
Sbjct: 61  LTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEDAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKL MSGYRLP++YR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLAMSGYRLPEDYR 167

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BLAST of Carg17557 vs. TAIR10
Match: AT5G27430.1 (Signal peptidase subunit)

HSP 1 Score: 280.4 bits (716), Expect = 7.2e-76
Identity = 130/167 (77.84%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA ICA+ASFSD   + +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET KN+LNQ+SLWD+IIP K+ AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+VMSGYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]

BLAST of Carg17557 vs. TAIR10
Match: AT3G05230.1 (Signal peptidase subunit)

HSP 1 Score: 269.6 bits (688), Expect = 1.3e-72
Identity = 125/167 (74.85%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MH+FGYRANAL+TFA T LA ICA+ASFSD   + +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETPKNSLNQ+SLWD+IIP+K+ AKFRI  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]

BLAST of Carg17557 vs. Swiss-Prot
Match: sp|Q53YF3|SPC3B_ARATH (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-74
Identity = 130/167 (77.84%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA ICA+ASFSD   + +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET KN+LNQ+SLWD+IIP K+ AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+VMSGYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]

BLAST of Carg17557 vs. Swiss-Prot
Match: sp|Q9MA96|SPC3A_ARATH (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.3e-71
Identity = 125/167 (74.85%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MH+FGYRANAL+TFA T LA ICA+ASFSD   + +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETPKNSLNQ+SLWD+IIP+K+ AKFRI  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]

BLAST of Carg17557 vs. Swiss-Prot
Match: sp|Q9LGB4|SPCS3_ORYSJ (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 64/137 (46.72%), Postives = 78/137 (56.93%), Query Frame = 0


Query: 30  DTLKSPSPTAQVQVLSINWFQNQPNGNDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYE 89
           D    PS  AQ  V  IN F  Q NGND                     +VFVFL AEYE
Sbjct: 30  DAFHVPSVQAQAHVTKINRFHKQLNGND---------------------KVFVFLTAEYE 89

Query: 90  TPKNSLNQISLWDSIIPSKDRAKFRIHTSNKYRFVDQGSNLRGKEFNLTLHWHVMPKTGK 149
             KNSLNQ+SLWD IIP KD+A  ++   +KY  +DQGS+LRGK+  L LHWHVMPK G 
Sbjct: 90  NSKNSLNQVSLWDHIIPDKDKANLQVEVKSKYPLIDQGSSLRGKKVQLVLHWHVMPKAGV 145

Query: 150 MFANKLVMSGYRLPQEY 167
           M  +++ +S + LP  Y
Sbjct: 150 MIRDRMALSEFNLPDSY 145

[Close]

BLAST of Carg17557 vs. Swiss-Prot
Match: sp|B0G180|SPCS3_DICDI (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19
Identity = 50/166 (30.12%), Postives = 90/166 (54.22%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHS   RAN +V F   +L  +  L   S    S      +++  I+ F  Q N  +   
Sbjct: 1   MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQRN-FEYSF 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           +++++ A+L+ LF WNTK +F+++ AEY T +N L+Q+ +WD I+  K +A       +K
Sbjct: 61  ISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLSK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEY 167
           Y  ++QG  L+     LT +++V+P +G +  +++  S ++ P  Y
Sbjct: 121 YPIINQGLGLKNNTIKLTFNYNVVPISGILTRHQVGTSEFKFPTTY 165

[Close]

BLAST of Carg17557 vs. Swiss-Prot
Match: sp|P28687|SPCS3_CHICK (Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 0


Query: 7   RANALVTFAATILAIICALASFSDTLKSPS-----PTAQVQVLSINWFQNQPNGNDEVSM 66
           RAN+L  F+ +++A +      +   K  S       ++V + ++  F      +D   +
Sbjct: 7   RANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRERSDLAFV 66

Query: 67  TLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAK-FRIHTSNK 126
           T +I+ADLQS+F WN KQ+F++L+AEY T  N+LNQ+ LWD II   D  + F     +K
Sbjct: 67  TFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIILRGDNPRLFLKDMKSK 126

Query: 127 YRFVDQGSNLRG-KEFNLTLHWHVMPKTG 149
           Y F D G+ L+G +   LTL W+V+P  G
Sbjct: 127 YFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155

[Close]

BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A1S3BZ61|A0A1S3BZ61_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG+RANAL+TFAATILA+ICALASFSDTL SPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWD I+PSK+ AKF+IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFA+KLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of Carg17557 vs. TrEMBL
Match: tr|Q84KA8|Q84KA8_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG+RANAL+TFAATILA+ICALASFSDTL SPSPTAQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWD I+PSK+ AKF+IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFA+KLVMSGYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A2P5CTT2|A0A2P5CTT2_PARAD (Signal peptidase complex subunit 3 OS=Parasponia andersonii OX=3476 GN=PanDNF1 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.2e-80
Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA++CA+ASFSD L  P+PTAQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFALTILALMCAMASFSDNLNHPTPTAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIP+KD AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPAKDNAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRF+DQGSNLRGKEFNLTLHWHVMPKTGKMFA+K+VMSGY LP+EYR
Sbjct: 121 YRFIDQGSNLRGKEFNLTLHWHVMPKTGKMFADKIVMSGYSLPEEYR 167

[Close]

BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A2P5C684|A0A2P5C684_9ROSA (Signal peptidase complex subunit 3 OS=Trema orientalis OX=63057 GN=TorDNF1 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.5e-80
Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA++CA+ASFSD L  P+PTAQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFALTILALMCAMASFSDNLNHPTPTAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEY TPKNSLNQISLWD IIP+KD AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYGTPKNSLNQISLWDGIIPAKDNAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRF+DQGSNLRGKEFNLTLHWHVMPKTGKMFA+K+VMSGYRLP+EYR
Sbjct: 121 YRFIDQGSNLRGKEFNLTLHWHVMPKTGKMFADKIVMSGYRLPEEYR 167

[Close]

BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A2P6R6T7|A0A2P6R6T7_ROSCH (Signal peptidase complex subunit 3 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0454281 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.5e-80
Identity = 146/167 (87.43%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA++CA+AS SD   +PSPT+QVQVL+INWFQ QPNGNDEVS
Sbjct: 51  MHSFGYRANALLTFAVTILALMCAMASMSDNFNTPSPTSQVQVLNINWFQKQPNGNDEVS 110

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKN+LNQISLWD IIPS++ AKF IHTSNK
Sbjct: 111 MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNALNQISLWDGIIPSQEHAKFWIHTSNK 170

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFA+K+VMSGYRLPQEYR
Sbjct: 171 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKMVMSGYRLPQEYR 217

The following BLAST results are available for this feature:

BLAST of Carg17557 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521352.1	1.8e-88	98.80	signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023521...	[more]
XP_022938136.1	3.9e-88	98.20	signal peptidase complex subunit 3B-like [Cucurbita moschata] >XP_022938137.1 si...	[more]
XP_022965984.1	3.7e-86	97.01	signal peptidase complex subunit 3B-like [Cucurbita maxima]	[more]
XP_008454895.1	1.5e-84	93.41	PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal...	[more]
XP_022150797.1	5.9e-84	91.62	signal peptidase complex subunit 3B-like [Momordica charantia]	[more]

BLAST of Carg17557 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27430.1	7.2e-76	77.84	Signal peptidase subunit	[more]
AT3G05230.1	1.3e-72	74.85	Signal peptidase subunit	[more]

BLAST of Carg17557 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q53YF3\|SPC3B_ARATH	1.3e-74	77.84	Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430...	[more]
sp\|Q9MA96\|SPC3A_ARATH	2.3e-71	74.85	Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230...	[more]
sp\|Q9LGB4\|SPCS3_ORYSJ	1.1e-28	46.72	Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=3...	[more]
sp\|B0G180\|SPCS3_DICDI	3.5e-19	30.12	Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3...	[more]
sp\|P28687\|SPCS3_CHICK	1.3e-18	36.24	Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1	[more]

BLAST of Carg17557 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZ61\|A0A1S3BZ61_CUCME	1.0e-84	93.41	Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 ...	[more]
tr\|Q84KA8\|Q84KA8_CUCME	1.0e-84	93.41	Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV...	[more]
tr\|A0A2P5CTT2\|A0A2P5CTT2_PARAD	1.2e-80	88.02	Signal peptidase complex subunit 3 OS=Parasponia andersonii OX=3476 GN=PanDNF1 P...	[more]
tr\|A0A2P5C684\|A0A2P5C684_9ROSA	1.5e-80	88.02	Signal peptidase complex subunit 3 OS=Trema orientalis OX=63057 GN=TorDNF1 PE=3 ...	[more]
tr\|A0A2P6R6T7\|A0A2P6R6T7_ROSCH	4.5e-80	87.43	Signal peptidase complex subunit 3 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005787	signal peptidase complex
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006465	signal peptide processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0008233	peptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR007653	SPC3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005787	signal peptidase complex
molecular_function	GO:0008233	peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17557-RA	Carg17557-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007653	Signal peptidase complex subunit 3	PFAM	PF04573	SPC22	coord: 6..164 e-value: 3.1E-54 score: 182.9
IPR007653	Signal peptidase complex subunit 3	PIRSF	PIRSF016089	SPC3	coord: 1..167 e-value: 5.4E-45 score: 151.0
IPR007653	Signal peptidase complex subunit 3	PANTHER	PTHR12804	MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23	coord: 1..167
None	No IPR available	PANTHER	PTHR12804:SF5	SUBFAMILY NOT NAMED	coord: 1..167

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17557	Cla019874	Watermelon (97103) v1	carwmB0714
Carg17557	Csa2G021570	Cucumber (Chinese Long) v2	carcuB0735
Carg17557	MELO3C004285	Melon (DHL92) v3.5.1	carmeB0711
Carg17557	ClCG02G015960	Watermelon (Charleston Gray)	carwcgB0692
Carg17557	CSPI02G03760	Wild cucumber (PI 183967)	carcpiB0751
Carg17557	Cucsa.091650	Cucumber (Gy14) v1	carcgyB0803
Carg17557	CmaCh12G010840	Cucurbita maxima (Rimu)	carcmaB1000
Carg17557	CmaCh05G011510	Cucurbita maxima (Rimu)	carcmaB1001
Carg17557	CmoCh12G011000	Cucurbita moschata (Rifu)	carcmoB0973
Carg17557	Lsi11G005250	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17557	CsGy2G003850	Cucumber (Gy14) v2	carcgybB0713
Carg17557	MELO3C004285.2	Melon (DHL92) v3.6.1	carmedB0724
Carg17557	CsaV3_2G005090	Cucumber (Chinese Long) v3	carcucB0754
Carg17557	Cla97C02G041730	Watermelon (97103) v2	carwmbB0746
Carg17557	Bhi05G001659	Wax gourd	carwgoB0843

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17557	Carg12890	Silver-seed gourd	carcarB587

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17557	Cucurbita moschata (Rifu)	carcmoB0974
Carg17557	Cucurbita pepo (Zucchini)	carcpeB1005
Carg17557	Cucurbita pepo (Zucchini)	carcpeB1006