Carg12890 (gene) Silver-seed gourd

Overview
NameCarg12890
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSignal peptidase complex subunit 3
LocationCucurbita_argyrosperma_scaffold_043 : 1008252 .. 1012456 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTTCGAGCGAGACTCCATTTCCTTTCCAAGTCTCGCATTGTTTCTTCTCTTTTCTTTTCCCTCCCATTGCAAGTTCATAGAATTCGAGACGGCTGAGTAATTGGGTGAAGGAGAATTAAAGAAACCAATTCAAAATGCATTCATTTGGGTACAGAGCCAACGCTTTGCTGACCTTTGCGGCTACAATACTCGCCGTCATTTGTGCTATAGCTTCCTTCTCCGATACCCTCAATTCGCCTTCACCCACAGCACAAGTTCAGGTCTCTCTTCTTGTTCCCCTTCTTTCTGGGGTTTTCCCCTTTAGATCTGTGCTTGAATTCTCTTGGATTTTTGGTTCGATTGCGAGACCCATTTGGTGATTTGATTTGGTTTTCTTGTTTTTGGGTCTTAGGTTTTGAGCATCAACTGGTTTCAAAGCCAACCCAATGGAAACGATGAGGTATGATCGATTACGCCTGTTTCTTGTCTCTTGAGTTTGTGAAATTTTGTGTGTGAAGAGGGATTTTTAGGTTAATTATGTAGGGCATTCCAGTTTCCTAACGTGTTGATTTTTATGAACCTTTTCTTTATCTTGTGTACTACATGCTTTGCTATTTGATGTGATGAACTGGGACAGTTGTGTCTTTAAAATTTTTGTAGAAGAACCAATTTGGTTAATGGAGACAGGGTAGGGCATGTAGCTTAGAAAGATCAATGATGTGGTATTTCCTTGTTCGAATCCTCTCTCGCCCACAGCGAGCCAAAAACGGAAGATTTTTCCCTTGGGTGTATGAAAATCATGGTTGGGGAAACTTTTATGAGCTTCCATCCTCTTAGGATTGATATGATTATGAAATGTTTACGAAATGGTTAGGATATGAGAATGATGTATGTATTTATACATTGTAATATAATATGAGAATGATATGATATAGGTTATGGTACGATAGGTTTGATGAATTGATATAGCTATGATACGATGTGTTAGAGGCACGCTCGGGATATGCTATGTGACTTTTATGATTTACGACGTGCATGATGTGGAGTGTTATGTCTGAAAATATGTGAATGATATGATATGATATGATATGGATGCAAAGGGTTTAATGGAGTCTCAAAGCTTGTCAAGGCTGATCATCTTCTCTTTGAAGACCCTCTAGTTCCTCTCAAGCCAAAACTTACATAGCCTTGCCATAGTATCATTAGGCCAAATTAACTATGGCCGTACTTCTTAAAGAAGTATAAAAAACGTGAGATCTCCCATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAATCTTGAGGAGAAACCCGAAAGAAAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTTCAACTCTTAGTACTTTGAAATTGAGTATGAATACTTTTTCGTGGAGTCGATAAACTTCCAGCAAAATTCCCCCATAAGCTAGACTTCAATGACTCCATCATCTTCATGAACCAGCCAATTTTCAAGGCTTTTGATGAATATGTATGCAATTTTATCTCCAACCTTGTACAGTTACTGAGTAATTACTACACTGTATTCATGATCAGATCTCTAAAGAGATGATATATGATTCTTGTGTTCTTATTCCATTCATGAAACGGTGGACTCTGTGCGAGAGCGATCGACTAGCTTATTATCCCGAAACAATGTAATCCTTTTTTCTTGAGGATACTTTAGTTCTTCGCTGCACTTTTTTCAACCAAAGTGCTTGATAATGAACTGTAAACAAAAATATTAGTTTTCAGATTCTTTGCGAGAGGACTAATGAGATGATAATCATAAAACAATGCAAGCACCTTTTGTTGATTATTTGAAAGAACGTGCCTTCTTTTTGCAGGTTAGCATGACTTTGAACATATCAGCTGACTTGCAGTCATTATTTACGTGGAATACAAAGCAGGTGCACTGGCGACTAATTTTCCTCTTTATTCTCTAATAATCCTTCGCATAGAGTATTGTTGGTTATTTATGATAGTTATAAATAATGAATTGATATAACTCGTTTGTTTGTTCACACTGAGCGATACATAGTTGAGGAAGAATTCGATCCGAAACTTCACTCAGATAGTGTAACGGCCCAAGCCTACCGCTAGCAGATATTGTCCTCTTCAGGCTTTCCTTTTAGGCATCTCCTCAAGGTTTTTAAAACGCCTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTTTCCTCCCCAACCGAGGTGGGATCTCACAATCCACTCCCTTCAGGGCCCAGCGTCCTTGCTGGCACTCGTTCCCCTCTCCAATCGATGTTGTTCACCTCTCCAATCAATGTGGGATCTCACAATCCACCCCCCATTTGGACCCAGCGTCCTCGCTGGCACACTGCCTGGTGTCCACCCCCTTTCAGGGCTCAGCGTCCTTGCTGGCACACCGCCTGGTGTCTGGCTCTGCTACCAATTTTTAACGGCCCAAGCCCACCATTAGTAGATAGTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCACCTCAAAGTTTTTAAAACGCGTATGCTAGGGACAAGTTTCTACATCCTTATAAATAATGCTTCGTCCTTCTCCCCAACTGACGTGGGATCTCACAGATAGTATCCTCTCTATAATAATCTTTTTTTGCTACATACTCTCTGACTTGAGCACTCCCACCAATCTAACTCACTAGTTACATTAAAGCCCACCCCTTATGTTCAAGCTAAATGCTAAGTCATTCTCCCTTCACTCTCTTCTAATTACGACCATCGGGGTCTTTTATCAGTCTCGAACAAACTTTCGTCACGCCTGAAGTTAATAGCATTTCTAATAGCCAGACGTCCATTCTACAGAGGGCGGTCATCGTGGCTTCTTGCCACTATTTGTGTATTCTGTGAACTCCGTCGTTCAAGTCAATAATAGTGTCGGGAATCGCATTGGTTTTATCTGTTTCCATTCATATTTCGTAAACAATAATGAAACCTTTCCTTGTTGAGATTTGTCAGTGTTATATTTTACCAAGCAGTGAACTGATTGCATAATCTTCATTTTAACATGTGGAACAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAGCGAACTCCTTGAATCAGGTGAGTTTCTGTTTGTTTTTAAGTTTCGTCTCTTTGGCAACTCAACTTCCCATCAATTTAATCCCTTCCTGAAACATCCTCTGCAGATCTCACTTTGGGACGGTATCATACCTTCCAAAGAGATAGCCAAATTTCAGATCCATACTTCAAACAAGTATCGTTTCGTTGATCAGGTTCGTCGCCTCCGACCCTTTTGCAAAACTTCTCCAACCAATTTAGTTTATAGCCAAGAGTGACTAAGTTGGATATCTATCTCCTTATATGCAGGGAAGCAATCTGAGAGGCAAAGAGTTTAAGTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGACAAATTGGTGATGTCCGGATACCACTTGCCAAAGGAATATAGATGAGGAGATTTCTCCATTCATTGTAATTTCTGAACTAAAGTTTTACATAGGTTTTAGCAGCATCACCTTATTAATCAACAACGTTACAAACACTGAACATTTCCTGAAGGGAACAGGAAGAGGAGGAATTGAAGTGTGGCGTTTTCCAAGGCCATTATGAATTGATATAACACAGTTTGGTTCCTTTTCCCCCCCTCCATCTCTTAATTGCATAGTCTTTGTGGTGGCAGATAGCCTTAAATTTAGGCACTCATCTGCATGAACTCCAAATGTGAGTGATCTCTTCTTAAGATTTGAGTATTTATAATTACACCACCATACCTGAAGCAATGGAGGAGTAAATCTTGTGCTTGTAGCAGCTACTAGGTTCCCCCCAATCTTCTTCACATGGTTTGTCTAGGAAGAAATAGCATTGCTGGACCAAATTTCTTTTCCACAATATTAGACTCAGATGTGGTGTGTGGAGGTGTCAAATTACTATTATGTGAAACACTATGAACTATGAACTGATGCTGTAATAGAGTCGAGTTGTAGATCATTTGGATAGAACTGTTTATTTGATGTATTGTCTGCAGGTTCAATACCATTGAGTGAATGTAACAGCTCAAGTAGATATTGTCCTTTTTGGATTTTCCCTTTTGGGTGGTTTGCATCTTGGTTTCGTTGTGTGC

mRNA sequence

CTGTTCGAGCGAGACTCCATTTCCTTTCCAAGTCTCGCATTGTTTCTTCTCTTTTCTTTTCCCTCCCATTGCAAGTTCATAGAATTCGAGACGGCTGAGTAATTGGGTGAAGGAGAATTAAAGAAACCAATTCAAAATGCATTCATTTGGGTACAGAGCCAACGCTTTGCTGACCTTTGCGGCTACAATACTCGCCGTCATTTGTGCTATAGCTTCCTTCTCCGATACCCTCAATTCGCCTTCACCCACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAGCCAACCCAATGGAAACGATGAGGTTAGCATGACTTTGAACATATCAGCTGACTTGCAGTCATTATTTACGTGGAATACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAGCGAACTCCTTGAATCAGATCTCACTTTGGGACGGTATCATACCTTCCAAAGAGATAGCCAAATTTCAGATCCATACTTCAAACAAGTATCGTTTCGTTGATCAGGGAAGCAATCTGAGAGGCAAAGAGTTTAAGTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGACAAATTGGTGATGTCCGGATACCACTTGCCAAAGGAATATAGATGAGGAGATTTCTCCATTCATTGTAATTTCTGAACTAAAGTTTTACATAGGTTTTAGCAGCATCACCTTATTAATCAACAACGTTACAAACACTGAACATTTCCTGAAGGGAACAGGAAGAGGAGGAATTGAAGTGTGGCGTTTTCCAAGGCCATTATGAATTGATATAACACAGTTTGGTTCCTTTTCCCCCCCTCCATCTCTTAATTGCATAGTCTTTGTGGTGGCAGATAGCCTTAAATTTAGGCACTCATCTGCATGAACTCCAAATGTGAGTGATCTCTTCTTAAGATTTGAGTATTTATAATTACACCACCATACCTGAAGCAATGGAGGAGTAAATCTTGTGCTTGTAGCAGCTACTAGGTTCCCCCCAATCTTCTTCACATGGTTTGTCTAGGAAGAAATAGCATTGCTGGACCAAATTTCTTTTCCACAATATTAGACTCAGATGTGGTGTGTGGAGGTGTCAAATTACTATTATGTGAAACACTATGAACTATGAACTGATGCTGTAATAGAGTCGAGTTGTAGATCATTTGGATAGAACTGTTTATTTGATGTATTGTCTGCAGGTTCAATACCATTGAGTGAATGTAACAGCTCAAGTAGATATTGTCCTTTTTGGATTTTCCCTTTTGGGTGGTTTGCATCTTGGTTTCGTTGTGTGC

Coding sequence (CDS)

ATGCATTCATTTGGGTACAGAGCCAACGCTTTGCTGACCTTTGCGGCTACAATACTCGCCGTCATTTGTGCTATAGCTTCCTTCTCCGATACCCTCAATTCGCCTTCACCCACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAGCCAACCCAATGGAAACGATGAGGTTAGCATGACTTTGAACATATCAGCTGACTTGCAGTCATTATTTACGTGGAATACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAGCGAACTCCTTGAATCAGATCTCACTTTGGGACGGTATCATACCTTCCAAAGAGATAGCCAAATTTCAGATCCATACTTCAAACAAGTATCGTTTCGTTGATCAGGGAAGCAATCTGAGAGGCAAAGAGTTTAAGTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGACAAATTGGTGATGTCCGGATACCACTTGCCAAAGGAATATAGATGA

Protein sequence

MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNKYRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR
Homology
[Close]
BLAST of Carg12890 vs. NCBI nr
Match: XP_022946298.1 (signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal peptidase complex subunit 3B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.4 bits (864), Expect = 2.7e-89
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFADKLVMSGYHLPKEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]
BLAST of Carg12890 vs. NCBI nr
Match: XP_022999140.1 (signal peptidase complex subunit 3B [Cucurbita maxima])

HSP 1 Score: 335.5 bits (859), Expect = 1.0e-88
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQCQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFADKLVMSGYHLPKEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 167

[Close]
BLAST of Carg12890 vs. NCBI nr
Match: XP_008454895.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal peptidase protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 327.8 bits (839), Expect = 2.2e-86
Identity = 159/167 (95.21%), Postives = 165/167 (98.80%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFG+RANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQ+QPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP+NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]
BLAST of Carg12890 vs. NCBI nr
Match: XP_004139189.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 3.1e-85
Identity = 158/167 (94.61%), Postives = 162/167 (97.01%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFG+RANALLTFAATILAVICA ASFSDTLNSPSPTAQVQVLSINWFQ QPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICAFASFSDTLNSPSPTAQVQVLSINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPLNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFA+KLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 167

[Close]
BLAST of Carg12890 vs. NCBI nr
Match: XP_022150797.1 (signal peptidase complex subunit 3B-like [Momordica charantia])

HSP 1 Score: 317.8 bits (813), Expect = 2.2e-83
Identity = 154/167 (92.22%), Postives = 162/167 (97.01%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFAATILAV+CA+ASFSDTLNSPSPTAQVQVLSINWFQ+QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAATILAVVCAMASFSDTLNSPSPTAQVQVLSINWFQNQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGIIPSKE AKFQIHTSNK
Sbjct: 61  LTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEDAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFA+KL MSGY LP++YR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLAMSGYRLPEDYR 167

[Close]
BLAST of Carg12890 vs. TAIR10
Match: AT5G27430.1 (Signal peptidase subunit)

HSP 1 Score: 278.5 bits (711), Expect = 2.7e-75
Identity = 131/167 (78.44%), Postives = 147/167 (88.02%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFA TILA ICAIASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET  N+LNQ+SLWD IIP KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRF+DQG NLRGK+F LTLHWHVMPKTGKMFADK+VMSGY LP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]
BLAST of Carg12890 vs. TAIR10
Match: AT3G05230.1 (Signal peptidase subunit)

HSP 1 Score: 267.3 bits (682), Expect = 6.3e-72
Identity = 126/167 (75.45%), Postives = 147/167 (88.02%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MH+FGYRANALLTFA T LA ICAIASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETP NSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRF+DQG NLRGK+F LTLHWHVMPKTGKMFADK+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]
BLAST of Carg12890 vs. Swiss-Prot
Match: sp|Q53YF3|SPC3B_ARATH (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 4.9e-74
Identity = 131/167 (78.44%), Postives = 147/167 (88.02%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFA TILA ICAIASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET  N+LNQ+SLWD IIP KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRF+DQG NLRGK+F LTLHWHVMPKTGKMFADK+VMSGY LP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]
BLAST of Carg12890 vs. Swiss-Prot
Match: sp|Q9MA96|SPC3A_ARATH (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-70
Identity = 126/167 (75.45%), Postives = 147/167 (88.02%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MH+FGYRANALLTFA T LA ICAIASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETP NSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRF+DQG NLRGK+F LTLHWHVMPKTGKMFADK+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]
BLAST of Carg12890 vs. Swiss-Prot
Match: sp|Q9LGB4|SPCS3_ORYSJ (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-28
Identity = 64/137 (46.72%), Postives = 79/137 (57.66%), Query Frame = 0 

Query: 30  DTLNSPSPTAQVQVLSINWFQSQPNGNDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYE 89
           D  + PS  AQ  V  IN F  Q NGND                     +VFVFL AEYE
Sbjct: 30  DAFHVPSVQAQAHVTKINRFHKQLNGND---------------------KVFVFLTAEYE 89

Query: 90  TPANSLNQISLWDGIIPSKEIAKFQIHTSNKYRFVDQGSNLRGKEFKLTLHWHVMPKTGK 149
              NSLNQ+SLWD IIP K+ A  Q+   +KY  +DQGS+LRGK+ +L LHWHVMPK G 
Sbjct: 90  NSKNSLNQVSLWDHIIPDKDKANLQVEVKSKYPLIDQGSSLRGKKVQLVLHWHVMPKAGV 145

Query: 150 MFADKLVMSGYHLPKEY 167
           M  D++ +S ++LP  Y
Sbjct: 150 MIRDRMALSEFNLPDSY 145

[Close]
BLAST of Carg12890 vs. Swiss-Prot
Match: sp|B0G180|SPCS3_DICDI (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.8e-18
Identity = 49/166 (29.52%), Postives = 88/166 (53.01%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHS   RAN ++ F   +L  +  +   S    S      +++  I+ F +Q N  +   
Sbjct: 1   MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQRN-FEYSF 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +++++ A+L+ LF WNTK +F+++ AEY T  N L+Q+ +WD I+  K  A       +K
Sbjct: 61  ISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLSK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEY 167
           Y  ++QG  L+    KLT +++V+P +G +   ++  S +  P  Y
Sbjct: 121 YPIINQGLGLKNNTIKLTFNYNVVPISGILTRHQVGTSEFKFPTTY 165

[Close]
BLAST of Carg12890 vs. Swiss-Prot
Match: sp|P28687|SPCS3_CHICK (Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.5e-18
Identity = 55/149 (36.91%), Postives = 86/149 (57.72%), Query Frame = 0 

Query: 7   RANALLTFAATILAVI---CAIASFSDTLNSPSPTA--QVQVLSINWFQSQPNGNDEVSM 66
           RAN+L  F+ +++A +   C I +     + P   A  +V + ++  F      +D   +
Sbjct: 7   RANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRERSDLAFV 66

Query: 67  TLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAK-FQIHTSNK 126
           T +I+ADLQS+F WN KQ+F++L+AEY T  N+LNQ+ LWD II   +  + F     +K
Sbjct: 67  TFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIILRGDNPRLFLKDMKSK 126

Query: 127 YRFVDQGSNLRG-KEFKLTLHWHVMPKTG 149
           Y F D G+ L+G +   LTL W+V+P  G
Sbjct: 127 YFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155

[Close]
BLAST of Carg12890 vs. TrEMBL
Match: tr|A0A1S3BZ61|A0A1S3BZ61_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.4e-86
Identity = 159/167 (95.21%), Postives = 165/167 (98.80%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFG+RANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQ+QPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP+NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]
BLAST of Carg12890 vs. TrEMBL
Match: tr|Q84KA8|Q84KA8_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.4e-86
Identity = 159/167 (95.21%), Postives = 165/167 (98.80%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFG+RANALLTFAATILAVICA+ASFSDTLNSPSPTAQVQVLSINWFQ+QPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP+NSLNQISLWDGI+PSKEIAKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFADKLVMSGY LP+EYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]
BLAST of Carg12890 vs. TrEMBL
Match: tr|A0A2P5CTT2|A0A2P5CTT2_PARAD (Signal peptidase complex subunit 3 OS=Parasponia andersonii OX=3476 GN=PanDNF1 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 9.0e-81
Identity = 148/167 (88.62%), Postives = 158/167 (94.61%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFA TILA++CA+ASFSD LN P+PTAQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFALTILALMCAMASFSDNLNHPTPTAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWDGIIP+K+ AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPAKDNAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRF+DQGSNLRGKEF LTLHWHVMPKTGKMFADK+VMSGY LP+EYR
Sbjct: 121 YRFIDQGSNLRGKEFNLTLHWHVMPKTGKMFADKIVMSGYSLPEEYR 167

[Close]
BLAST of Carg12890 vs. TrEMBL
Match: tr|A0A2P5C684|A0A2P5C684_9ROSA (Signal peptidase complex subunit 3 OS=Trema orientalis OX=63057 GN=TorDNF1 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.5e-80
Identity = 147/167 (88.02%), Postives = 157/167 (94.01%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFA TILA++CA+ASFSD LN P+PTAQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFALTILALMCAMASFSDNLNHPTPTAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEY TP NSLNQISLWDGIIP+K+ AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYGTPKNSLNQISLWDGIIPAKDNAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRF+DQGSNLRGKEF LTLHWHVMPKTGKMFADK+VMSGY LP+EYR
Sbjct: 121 YRFIDQGSNLRGKEFNLTLHWHVMPKTGKMFADKIVMSGYRLPEEYR 167

[Close]
BLAST of Carg12890 vs. TrEMBL
Match: tr|A0A2P6R6T7|A0A2P6R6T7_ROSCH (Signal peptidase complex subunit 3 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0454281 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.5e-80
Identity = 147/167 (88.02%), Postives = 157/167 (94.01%), Query Frame = 0 

Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFA TILA++CA+AS SD  N+PSPT+QVQVL+INWFQ QPNGNDEVS
Sbjct: 51  MHSFGYRANALLTFAVTILALMCAMASMSDNFNTPSPTSQVQVLNINWFQKQPNGNDEVS 110

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP N+LNQISLWDGIIPS+E AKF IHTSNK
Sbjct: 111 MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNALNQISLWDGIIPSQEHAKFWIHTSNK 170

Query: 121 YRFVDQGSNLRGKEFKLTLHWHVMPKTGKMFADKLVMSGYHLPKEYR 168
           YRFVDQGSNLRGKEF LTLHWHVMPKTGKMFADK+VMSGY LP+EYR
Sbjct: 171 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKMVMSGYRLPQEYR 217

The following BLAST results are available for this feature:
BLAST of Carg12890 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946298.12.7e-8999.40signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal ... [more]
XP_022999140.11.0e-8898.80signal peptidase complex subunit 3B [Cucurbita maxima][more]
XP_008454895.12.2e-8695.21PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal... [more]
XP_004139189.13.1e-8594.61PREDICTED: signal peptidase complex subunit 3B [Cucumis sativus][more]
XP_022150797.12.2e-8392.22signal peptidase complex subunit 3B-like [Momordica charantia][more]
BLAST of Carg12890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G27430.12.7e-7578.44Signal peptidase subunit[more]
AT3G05230.16.3e-7275.45Signal peptidase subunit[more]
BLAST of Carg12890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q53YF3|SPC3B_ARATH4.9e-7478.44Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430... [more]
sp|Q9MA96|SPC3A_ARATH1.1e-7075.45Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230... [more]
sp|Q9LGB4|SPCS3_ORYSJ1.8e-2846.72Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=3... [more]
sp|B0G180|SPCS3_DICDI3.8e-1829.52Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3... [more]
sp|P28687|SPCS3_CHICK8.5e-1836.91Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1[more]
BLAST of Carg12890 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BZ61|A0A1S3BZ61_CUCME1.4e-8695.21Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 ... [more]
tr|Q84KA8|Q84KA8_CUCME1.4e-8695.21Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV... [more]
tr|A0A2P5CTT2|A0A2P5CTT2_PARAD9.0e-8188.62Signal peptidase complex subunit 3 OS=Parasponia andersonii OX=3476 GN=PanDNF1 P... [more]
tr|A0A2P5C684|A0A2P5C684_9ROSA4.5e-8088.02Signal peptidase complex subunit 3 OS=Trema orientalis OX=63057 GN=TorDNF1 PE=3 ... [more]
tr|A0A2P6R6T7|A0A2P6R6T7_ROSCH4.5e-8088.02Signal peptidase complex subunit 3 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005787signal peptidase complex
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR007653SPC3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006465 signal peptide processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005787 signal peptidase complex
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12890-RACarg12890-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..167
e-value: 2.8E-43
score: 145.4
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 6..164
e-value: 6.9E-53
score: 178.5
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 1..167
NoneNo IPR availablePANTHERPTHR12804:SF5SUBFAMILY NOT NAMEDcoord: 1..167