CsGy2G003440 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAACGAAATTGAATTATGGATTTCGTCGGTCGGTCGAATTAAAATCGTGAGTTCCACACGCGGTGTCTTGTGGATTCAAAATTATGACCATTTTCATCATTCCTTGGCTTTTTGTATATTCGGCCATCAGCCATGCCTTCAAAATTTCGCTCCATTCCCATTGTTCTCTTCCTCTTCTCTTTCAAGCTGACCCTTTAGGTAAATGGTTCTCTCCCATTTCATCTCTAATTCCTCTGTTTCTCTTTTATTTTACTTGTTCTTTTTCAGCCATGTCCTCCATTTCTGTGGTGAAACTGAATTGTTCTTATCGATTTCTTGTTTAATTTCTGTTTTTCTCTTTGCGTGTTTTATTTATTTATTTTCGCTCGTTGAAGTTTAAAGATACCAAAAGTTGCGCTTCACTACTTTCCAATTTCGATGGTAGCTGCAAGGTGTAACTCTTACGCTCTTGGTTTTTTGAGTTTAATTTTTTTTGCTTCTTGTTGTTTACTGTTTAGCAAAAAGTATGGTGAGTACTAACAGAAAGTCCCAAACTTAATAGATAGATGATCATGTTCTAAGGAGCGCGATACTTTTGTTTGGCTAGCTTGTTCTTAGCTGATATGTGTCAGACACTCTGAGTTTTTTTGTTAAACGCTCATAGAACACTTTGTTGTATAGACCAAAAAATATTTGTATGATAATAATAATAATAACTTTGAAGTGTAAAATATATCCAGCTGAGTTTTTTTTAAGCATACAAGTGCATTAACTCATTTCCTCTAGATTTTAATTTATATATTTTGAAAATCGTATTGATTGGAACTCCTAGTTTTAACTGACTAAGTGTGAACTTATTTAAGGACATTGAAGGTTAGCATTGATCTTCTCTCTCAAATTTGGCGACGAGGAATTAGTTTTTGTGTCATTCATGTAGTTCCATTTTGCTTTTGAGCATTTGAATTGTTTGTTAACTATTGCTTTGATCAATATATTCGAAAGTGAAATTTCCTTAGTTTATTTTATTGATCAGTATCCAATTTTACCAGTTATTTCAGTTCTCCTAATAACCTTCATTGGATTTGAGTTCAGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAAGCATCTTCTTTAGCCAAAATGGCAATGGTAGCTCAAATTAGTGTTCGAATTTAAATGCTTACTCATTTTATGTTTTCTTTTATGTGGTTTTCAGTTTTTCCCTTGTATTATTCAGGTCCAACTATAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGTACATTCTCATGAGTTGCGCCATCTTAGTTTCTCAATGTTAGATACAAAGTGTCTTTTAGGACATTATAACTCCACTTGCAAACAATTGGTTGCGCAGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCAGATGATGAGAATCGTCACGTTGGTGATCTTGGAAATGTGGTTGCTGGTGATGATGGTATGTTTAATGCTATTCCATATTGCTTTTCATTTTCTCCTTGAAGTAAATTTTAGGAAAACTATGTTTTTACTTTGCGAGTTCTCAGATTATGTTTTTTTTATTCTTCAATTTTCAAAACGTACATTTTTATTCCTTGAGTTTTTTTTAGAATAGATGTATTTGGTCACGAGTAAATCTTTAAATATATTTTTCATTATTATTTTATATTACTTCTATCACATTGACATAGAAAAATAACTTTCTTAAAATTTATTTTTCTAATTTAAAATAATGATAAGAAATTTATGTCGGACCTTTTGAACTTTAAAAACTCGAAAACTAAGAAAAGTACATGTAAAAAATTTAGAGATCAAATTTACATGTCCTAAAAGATTTGGAGACTAAAAACAGTATATCTCGAAAACTATGAAACTAAACGCACACATAATTTAAAACTCAAGGTAATTTTGTCTAAATTTTAATGAGCCTAAATTCAATCCCTCCAAAATGCAGGACACTGGATTCCTTGAAGGCATCCAGCTTCCCTCTCCACCCTCCTAGCAATGACAATATTTCAATAAATATCACTTAATTTGACATGATTGTAAATGTTGTTACGTTTACCGTACAGGTACTGCTACTTTCTCAATTATTGACAAACAGGTTTGGACAATTTTATGTTTAGTTTGATATTTCACCATCTCTACTGGAAGTCTCAACTAGTGAGCATTACTTCTTTCTATGTTATGCAGATTTCCCTTGTTGGACCAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTAATGTTATAAATCTTCATTGCTATATTTCTAATAGGAATTCTACACATTTAACTCTATCGAAACTTTATCGTGCAAACATTTTAATGATTGACCTGAAGAAATTAACCTCAATTGCATTAATTGTAACTATGCTCCACTTTCGCCTTGGTATTAATTTAATCTTCTTTGAATTCAGTGATATCCTTTTGGGGTTCTTCCCATTTTCTCTCCATACGTGCAGAACATCCATATTCTTCACATTTGTATAATTCAGTTTATTCAAATCTTAAACCAATAGATCATTTTACGTGCTGGAAGTATCAATCTTTGGAATATTTGTTTCCCTTCAATTTCTTGTAAACCTCCCGATGTGTTCAAAAATACCTCAAAGGAATCTTTTTTATCACAGAATGCAGAATGGTTAAAAGAAACTGTAACCAGCAGCCATTTATATAGGCTGAGATAAACAACCTAGGGAAAAAAGGGCTCTCGATAAAAACAAAACAAACTAACAGCTACCAAATAAAGCTGTAAAAATACAACTAAGAAGGGTAAAATCTAAGAACAAAGAATTATCTAACTTAAACAAGAAACATCCCCAAGAAAGAACAAGAAACTAGGAACAAACTAATAACAATAGCCCTAATGACCTCCTTTTGTCTCTGCCTGTCAAGTGGATGACATTCCATTAAATTCAGGATAACCAAATAAAGAAATCTGAAGCATAATCTGACCTTGTCTGCAGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGCTGTGGTAAGTTACATAATCATACTAATTCTTCACATTCACATTGCTTCTAAGGATTATGCTATGCCATCCAAACGGTTAAAAAAAACAAAAACAAAAAAGCATACTTGTTCAAACCGTACATTTCTTTTTTCGATAGTAGGTTTGAGATTTGATAGAACCAAGTTCATGTTAGTTAAATTATTGAACGTGGAATTATCGTTAGGTGTATGTCTTTTAGTTAATTTACCAAGGTTTTAAATTTTACTCTCGCAACAAATGTACAGTTCTAAATAACAGTCATATATGTATAATGACGTTATGTGATAAATTGTACTGGTACTTTATACATATACACACTTCTCTGGTTTTATTGCTATAATTTACATCAATTCTTTAACTTGCACAAATAGATTTAACACCTTGAATGTATTGATTGGGACTTCTTTTATTTTCTTGGGATTAATCTGTTCTCTAAAAGAGGTAGCTAAACTTTTTCCTTGACGTAAACATCTGTTATTATATATTTGTTGCAGGCGTTATTGGGCTGCAAGAGTGAAAAACACTTTGGTTTGGATGGTCTGTGATGATTGATGAAGTATAATGTATAAAATGCTTCACTTTGGTTTGGAACATATGTATTGTATCTAAAATAAGATGGCTTCAAGCCCTATAGCAGAAATAAATAAAATTAGAATGAAGTACTGCTAAATCTAATCTTATCTTTTCTTTACTTTATTCTTCTCTTCTCTCCTCTCTCTCTTTTATTTTAGGAAACAATGTTTTCACATAATATAGACCGGCACAATAGAAGAATCAATATGTAATGCCGATTGAAATAGCAGAATTATTAGGAGAATATTAGTAGGGTGTTCGGTTGAGGCATGTTAGAATATTCATTATGTTTGTTAAGTCTTTTTGTTATAAATAGAAGGTGAGGGGTTAGAGAGGAGGGTGTGAAGAATTTTGTAGTGGAATTTCCTTGTAACGGAAATTTGAAAGAGACTAGCTCTCTCCAAAGGTTAGGGGTTACTTGTTCTTGTGATATTCTAACATATATTTTATATACCTTTGTATTTAATGTCCTATAATTGTTCAGTTCCTATAGAGTTCATC CTCAACGAAATTGAATTATGGATTTCGTCGGTCGGTCGAATTAAAATCGTGAGTTCCACACGCGGTGTCTTGTGGATTCAAAATTATGACCATTTTCATCATTCCTTGGCTTTTTGTATATTCGGCCATCAGCCATGCCTTCAAAATTTCGCTCCATTCCCATTGTTCTCTTCCTCTTCTCTTTCAAGCTGACCCTTTAGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAAGCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTATAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCAGATGATGAGAATCGTCACGTTGGTGATCTTGGAAATGTGGTTGCTGGTACTGCTACTTTCTCAATTATTGACAAACAGATTTCCCTTGTTGGACCAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGCTGTGGCGTTATTGGGCTGCAAGAGTGAAAAACACTTTGGTTTGGATGGTCTGTGATGATTGATGAAGTATAATGTATAAAATGCTTCACTTTGGTTTGGAACATATGTATTGTATCTAAAATAAGATGGCTTCAAGCCCTATAGCAGAAATAAATAAAATTAGAATGAAGTACTGCTAAATCTAATCTTATCTTTTCTTTACTTTATTCTTCTCTTCTCTCCTCTCTCTCTTTTATTTTAGGAAACAATGTTTTCACATAATATAGACCGGCACAATAGAAGAATCAATATGTAATGCCGATTGAAATAGCAGAATTATTAGGAGAATATTAGTAGGGTGTTCGGTTGAGGCATGTTAGAATATTCATTATGTTTGTTAAGTCTTTTTGTTATAAATAGAAGGTGAGGGGTTAGAGAGGAGGGTGTGAAGAATTTTGTAGTGGAATTTCCTTGTAACGGAAATTTGAAAGAGACTAGCTCTCTCCAAAGGTTAGGGGTTACTTGTTCTTGTGATATTCTAACATATATTTTATATACCTTTGTATTTAATGTCCTATAATTGTTCAGTTCCTATAGAGTTCATC ATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAAGCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTATAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCAGATGATGAGAATCGTCACGTTGGTGATCTTGGAAATGTGGTTGCTGGTACTGCTACTTTCTCAATTATTGACAAACAGATTTCCCTTGTTGGACCAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGCTGTGGCGTTATTGGGCTGCAAGAGTGA MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTGPHFNPEGKDHGAPDDENRHVGDLGNVVAGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_004139207.1 (PREDICTED: superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_011648784.1 PREDICTED: superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >KGN60844.1 hypothetical protein Csa_2G013250 [Cucumis sativus]) HSP 1 Score: 297.4 bits (760), Expect = 2.8e-77 Identity = 149/152 (98.03%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_008455574.1 (PREDICTED: superoxide dismutase [Cu-Zn] isoform X1 [Cucumis melo]) HSP 1 Score: 290.8 bits (743), Expect = 2.6e-75 Identity = 146/152 (96.05%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_022999148.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 274.6 bits (701), Expect = 1.9e-70 Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_022946180.1 (superoxide dismutase [Cu-Zn]-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 272.3 bits (695), Expect = 9.6e-70 Identity = 135/152 (88.82%), Postives = 140/152 (92.11%), Query Frame = 0
BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_022150819.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Momordica charantia] >XP_022150820.1 superoxide dismutase [Cu-Zn] 1-like isoform X2 [Momordica charantia]) HSP 1 Score: 269.2 bits (687), Expect = 8.1e-69 Identity = 131/152 (86.18%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CsGy2G003440 vs. TAIR10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1) HSP 1 Score: 229.6 bits (584), Expect = 1.3e-60 Identity = 106/151 (70.20%), Postives = 127/151 (84.11%), Query Frame = 0
BLAST of CsGy2G003440 vs. TAIR10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3) HSP 1 Score: 184.9 bits (468), Expect = 3.7e-47 Identity = 87/150 (58.00%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of CsGy2G003440 vs. TAIR10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2) HSP 1 Score: 161.8 bits (408), Expect = 3.3e-40 Identity = 78/117 (66.67%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of CsGy2G003440 vs. TAIR10
Match: AT1G12520.1 (copper chaperone for SOD1) HSP 1 Score: 48.1 bits (113), Expect = 5.4e-06 Identity = 38/140 (27.14%), Postives = 63/140 (45.00%), Query Frame = 0
BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|Q07796|SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2) HSP 1 Score: 238.0 bits (606), Expect = 6.6e-62 Identity = 111/151 (73.51%), Postives = 130/151 (86.09%), Query Frame = 0
BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|P93258|SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.5e-61 Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 0
BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|P27082|SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2) HSP 1 Score: 235.3 bits (599), Expect = 4.3e-61 Identity = 108/151 (71.52%), Postives = 131/151 (86.75%), Query Frame = 0
BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|Q8L5E0|SODC2_OLEEU (Superoxide dismutase [Cu-Zn] 2 OS=Olea europaea OX=4146 GN=OLE5 PE=1 SV=2) HSP 1 Score: 234.2 bits (596), Expect = 9.5e-61 Identity = 106/151 (70.20%), Postives = 130/151 (86.09%), Query Frame = 0
BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|O49073|SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii OX=70770 GN=SODCC PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.2e-60 Identity = 109/151 (72.19%), Postives = 128/151 (84.77%), Query Frame = 0
BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A0A0LIH2|A0A0A0LIH2_CUCSA (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.8e-77 Identity = 149/152 (98.03%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A1S3C1D1|A0A1S3C1D1_CUCME (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.7e-75 Identity = 146/152 (96.05%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A0D2U2R5|A0A0D2U2R5_GOSRA (Superoxide dismutase [Cu-Zn] OS=Gossypium raimondii OX=29730 GN=B456_013G192900 PE=3 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.9e-62 Identity = 115/151 (76.16%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A2P5R123|A0A2P5R123_GOSBA (Superoxide dismutase [Cu-Zn] OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22562 PE=3 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61 Identity = 114/151 (75.50%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|D2D329|D2D329_GOSHI (Superoxide dismutase [Cu-Zn] OS=Gossypium hirsutum OX=3635 PE=2 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.4e-61 Identity = 114/151 (75.50%), Postives = 132/151 (87.42%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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