Cp4.1LG18g09420 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g09420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Cytoplasmic dynein 2 light intermediate chain 1
Location	Cp4.1LG18 : 8241665 .. 8250417 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCATTTTTGTGAAGAAAGAAGAAGAAGAAGAAGACGAAGATGAACCAGGGGATACCTTTCCGCTTTCTGTTTCTGGGGGTGGTGGATGTTTTCTTTTAAAAAATAAAATGTATTATTTACTATTATTATTCTTTTTCGGGAGATGGAGGAGGAAGGCGTAGATCTCGATCTTCATCTTCATCTTCATCTAAGTCTACTTCCCCTTTTGCCTCCAAAATATTAGTAATATTCCCTCCTTAACTTCTTTATCCACTTTCTCAAATTGAATCAAATTGAATCGAATTAAATCAAATTAAATCAAATTACATCAAATTACATCAAATTAAATCAAATTAAATCAAATTAAGAGAGAAAGAAAGAACGAAATAACGAATGTGGCCTAAACCCTCCCATCTTTTGTTCGCTCGCTCTCTCTCGCTTCCTTCACGCTGGCTCCCCATCCATTTCAGTCGCTCATTGTCGCCACCGTCACCGCCCACTTTCTTCTGCTCGTGCCGCCGCGTCCTCCCTCTTAGCGAGTTCCACTGCTTTTCTACTCTCTTCTTATCACTGGTATTCTCCCTACTCCATCTACCTCTTTTTTCTCTCTCCAAAAACTCAAATTAGGACTTGTCTACTCAAACAATGGAGGAGTTGTACTTATTTCTTCTTCAATCAGCAGAACAGCAACGAAAATAAATTAGCCTTGCGGAAAATTACGACTTTTCGAACTTATCGTGACCTGCTTTTTTTTATTTCCGGCATATGTCTATTATCTTTTAGGGTTTGATAATCTGTATATCTCTTTTGTCTCTACTGAAATTTTCCTTGTTTCTAGTCTCCTAAATCTTCCAAAGCACCACCCCTATGAATATTCCTGCATCGCCCTTCTTCTCTACTTATCTAGAACTAGTTGAAGTAATCTATCGTATTCCAATTTTTCCTTACAAACAAATACACAGATATTCGAATTAAAGTAGTCTGTTTTATTTCGAGAACTTACTCCTCCATGCCTGGTTGTTTATGGCTCCTTCTAGCCAAACGCACACCACAGCTTAATGGTTTTTCATATTTACTCAAGCTTGTAACTTTGAGTTGATACTAAGGGAAGATGTCTTACAATAGATCTATTTGGATTTCAAGAAGCAAGCGGATCATTCTCAATTCACCAACTTCAACTGTGAGGGCACCAACAAACTTACAAACCTTACTCGATTACAAGCGCAATATATGTGTGGTCTACTTGGGCAATTCTCATTTGGGAATTGAAGTAATTTGCTTAGGAAAAAAAAGAAAAAAATTCCATTAGACATGACAGGATTTGGCTATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGAATGTCCATCAGAGGCTCTAAAGGTAAAGATCGCCGAGTTGGAGAGATTTAGGAAGAAGAAGAAAAGTGGCAAGCAGTTCATTGTGGACGTTCCTGAATCAAAATCCTTTCTTGACACTGCTTCTATGCCCATGATTCTAACTGCGGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGGTATGCCCTACTCCTCAACTTGGTTCTCATTCTTTTTCCTCCATTGCCTTTATTTTATTGAGTAAAATGAAATAGAACGAGATTTGTGTGTGTGTGTGTGTGTAGTAGTCTAGGACATGTATAGAAATCTCGGTAAGAATAGCTTCTTCTTCNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATTCTCCAACTCTGTGAAATTGTTGAGGAACATAAGCACACTCCAATGTAGGCGTGTGGATGAAGGAAATTTTTCTGGATGTGGTCGTTGTGCTTTATTTTGCATTTTATTAATGTCGCTAGTTTGTCTGTGCTCGTAAGAATCTAGGAGGACATATCCTGTCTCGTTCAATTAATGCCATGCTTTCAGGAAAATGTTAATCCCTTTTAATGAAATTATGACCTTATTTTAGCATATGCTGTGGATGTATAGTATAAGTTCAGTCCCCACCTGGGTTGGGTTTATTTCAAGCAAATCTTATTTATCTCTTTTAATATGCGACTGTGCTTGTTTTCAGTATGATGAGTCAAGATCTGAAGAGCTGATAGAGCGCAAAATAAAGAATTCTCCGCCAGGTCAAGGAACTGTGAGGATGCTTAGTCGGGAGGAGTGGGAGGAAATGCGAGAGGTTCGACCAAGGACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTGTACACAGGGTAAGGCAGTTATATCACTGATCTCATATAGGAATTGATGTGAAAGCCTCCACATTTCCCTTCTTTTATCCCATCCCTTAATGATGATAACGTGCTTCCCCATTTCCATGCTTATTACAGATTTGTGTGATCTACTTTGTTGAAACTTCCCAGTTTCTATCAGTTATATGGTTGAATTTTCAACTTCTGCCGTTGCCATTCAAATTTTTTAAATGATTTTTTGTCGTTAGAAGAGACGACATCCTATGTAGTTTTATAGACCTGTAGATGTATGCGGCATGTGGATTGGGGGCAGGTTGACCAGGGAGTGATAATTTTTTAAAAGTACTTGCTTTGGCAATCGTTTCATGCAGGAAGATTTGAAGGACTGGACAGTTGATGTGCTGTCAAATGCACTTACTCGGGCGGAAGAAAGTGTGAGGCATGATTCTACTTCCAGGTGACTTCTCCGAAGGGCCTTCTCCTAGATGTGGAGACTTTCAAACTCATCTGAGTTGGTGTTTGGTCATGCAAAATTGTTTTGTTGGGCGCAACTCCTGAAAATGTGCTTTGAAGGATGGTTGGTTAGTAACACATTTCAAAAATTAGTTTGTTTCTATGTTTGATCTGATTTTGATCATGTAAATCTCCTACATGATATTTTATGTAGAGAACAATCAGGTCGCCATGAACCGGGATAGAGATAGTAGGTAATTTGATTGTGACTGAATCGCAAGTAGGTGGTGGAAAAGCTTAGATAGTGGTGAGTGGGTATATGCAATTCAGGAGTTTGGCGGCCGAAACTATTATTTGTATTTATTAGATTTGCAATTTTGATCTCCTTGTTTTAACGATGGATTCTTTTGTTCTCCTTTAACCCTTTTGTTCTTCCCTTATCTTTGAGGCAAACTGTGATTTATTTATTAGGATCTCCAAGACACTATTAATTGTTAAGGACGGAGGGATAAACGCAGGTCCTCGTCTCTGAATGCAGGGTACAACCGAGTTGAATCTTTTTATTAACAACGGTTAAATTTGATACAACGTTTTATTATTATTATTTTTTAATAGGAAAAAAAAGGTCTTTGTAACTGTTATGGTCAAGTCAAAGCTTCTGCATTCCTTTTCTTTACTTTTAATTGCTCGAAACATATATGTCGAGGGAGTGTATTACAAACAACAAATGTATACTTGAACCTTCATAAGGTAAATGCGGTACCTTGGTGAAAGAGAATAAAACAACTCGGAATCAAATAAAATTTGTTCCATAGATTTTGTTCAAATTTTTAATATTTTGATATAGGTTGTTCAAAGGGTTTTAAAGTTTAATTGCTTCTATAAATTTAAATTTCTTGATTTGAATTAGTGGGTAATAAATACATGAGAGTGTAGAGAGGAGGCTTGGATTAAAATGATTGGCAAGAATGATGGATTGTCGGCCACTCATAGTTTGACCCATTCTCTCTGTTTTGTCGCCTCCATCTCTCAGCTTACCTCTCTGCTCCGTGCTTCCCATCCTCCTCTCTCATTTCAGCTTTCTTATTACCTCACCTTCAATGGCTTCTTTTTCAGCTTCTTCTCTCAGCTTCCACCTACCGCCGAATCCACATTCCAAGATTAACCAGGTTCTTCTCTCATTCTTCTTCACACCTTAATTTACACTTCCACTTGCATTGCTCTTTTCCTACTTCCCGCTGTGTTCGACACCTTCCTCCATCTCTTGATTCTTTTCTTCTTTAGTTTAATTATCAGTTATAATTGATTATCATTTATTTAAGGAAGACGGCGGCGCTGATAGGGGCTCCATGCTATGGGGCTCTGCCTCCAACCGCTCATCTTTGAAATCCTCCTTCATCTCTCCCCTACGTCAGATTCCCTCCACAAGGAAGCAAAAGTGTGCTGTTGCAGCTGCCCCCAAGTTCTCCATGCGCGTCGCTTCCAAGCAAGCCTATATCTGTCGTGATTGCGGGTACCACTTCGTATCTCTCCTTCCATTCCGCTTTTGAGCCTAATTTATATCTTAATTTCCCCCATCTTTGTAAAGCTCTCTTTTGGACCAATATGTAGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAACTATTTCTGTCCTGGTAATTTGCTTCTGTCTTCTTCCACCTTCTTTCCAAACTTAATTCGTATAATCCTCGTGTCTACCAGTTCAAACCAATTTCTTGAATTGCCTCGTCAATCGGGCCAATTACTTTACTTTTGACGTTGGGTCGTTCATTTTTAGCACAATTAAGTTCCTGCTATTATTTTATACTGAGAACTTAAAAAGGATATCTTCAAGAACCAAAGAAACAGAACTTCTAGAACATAAAGTTCTCTTCCTGTCAGCGAAACCAACTTCCAATCATTTGCATTTGCTTTCAATAAAGAAGTTGAAATCTAATAAGTTGTCGTGCCTTGGCAGTCTGTGGTGCTCCTAAGCGACGATTTAGACCTTATGAGCAATCAGTGACTAAAAATGATAACGAATTTGATGTGAGGAAGGCAAGAAAGGCGCAGATTCAGAAAGATGAAGCTATTGGGTAAGAGGGAAAATCAAACTACTCTTTGTAAATGATCATAGATTTTAATGATTGTTCATTCAGTCTGATTGATATCACGTAAAACGGTATAGGAAGGTGCTGCCTATTGCCGCTGCAGTGGGAATCCTGGCACTTGTAGGTTTATACCTGTACCTGAATAGCGTCTTTTAGATCGAGTGGCTTGCTCGATGACGGGGGCTTGACATCATTTGTTTCATCATTTTCTTCCCGAGGCTGTTTTCTATTGATTTAAATATTAAATGTATTTTTTCGACCCACTTTCCGAAAACCCTGGCAAATTGTTTATTGAGCGTTTATTTACACTCAGCAGAGTAGCCATTGGATCATATATGAACTGCCCATCGCCTTACCTTAGTTTATGTACCTGTGGATGTGGCTTTGGGTGTAATACTGACTTTGGGATGATTATATCTTGGAAGATTTTGTTTAACCAGTTTCTTCCATGGACTGGACAATTGATGTGCTTTTGGATTCGCTTATTCAGGGAGAAGGAAGTGTTAGACACGTTTCTAAGCGACCGCCCTCAACATTGTCCTAAATTGTGGGACAAATCAGGCTCACCTACACTTCCTTTATGGTTATGTAAAACTATTTAAGGTGCAGAACCAGGAAGTGTGTGCTTCCCAGGATGGTTAGCAAGGCATCTGAGAAATGAACCTTTTGACCTTATGTGATTTGGGTCTGTAGGTTTTCCCGAGTATCAGTTGGTTTAGCACATTGTTAACATTATATGTAGAGGAATCAGAGTTAGAGAAAGTAGTGAATTGCAAATGGGAGGTTGTTTTTCATTGCCAAGAATGCTTGATCGTCTCTTTTACATTAAGTCTGCATCAGAAAACTTGGGGTGGAGGCCTGTTATCCAGAAACGACTTGAATAGCAGAAGTGACCTTTGAGGTTGCGAGAATGGTGCTTCATGAGAGGCACCTCGAATGGTCGCGAATGAAAGGATACCACCATAAACTTGGGTCCAACCTGCGACCTGAGACAGACGGGGAAATGCTCAATTGAATTGCGCAATTCGAAATCAGGACAGATAGCGAGCGGTTACCTGCTTTCCCTGGAACCAAGCACCGTATGGAACACTAGTGTTAAGACCCAGCTCTGTTGCCAACCTATCAACCAACCGACGACTACCCATCAATGGAATTACTGAATCCTGATCGCCACTGGCAACAGAAAATGAAATAAGAAAGAATAGGTGTTGCGTAGAGATCCATCTGATTTATGGTTTTGATAAGGTAATGTACATACACCTACCTGTAAATCAAGACCCGTATGCCGGCTTTAACAAGTGACCCAACAATGGAAATGGTAGGAATTTCCAGGTTGAGAAGCTCGTAGTCCAGGGCTCTGGTGTGATCAGTGATGTCAAATAAGAGTCAGAAACGAGAATGGTGTACACAATAATGTAATACAAGGTCAAAGCCCAGTTGAATTACTCGCTGCAGACAGCCCAGTTGTGGACTCCGACAAGACGGGCGTGAAGAGCCTTTTTCACATCCTCTCGGTTCAGATATTTAACAGTTTCATCTTCAATGCAAACATCTATCCTCTCTCGGACATGCTGCCAAATTAAGTATCCTTAAACACCACAAATTTATTATTTAGAGAAGAAAAGAGTATTTAGTACCTGTGGGCTTAAATACTTGGACTGCGAGAGCACTGAAGGAATACAGACATCAAGAGTAACGTCATATTTGTCCACGAATTTACTGGTTTCTGTATTGACTTGGGTCATCACCCTCAAACAAACCCCTGAGATGGAGTCTCTGTAGTACTCACTAACGTATCGGGAATAGTTACAAGCAGCAGTGAACAATGTGTAAGTGGAGTCTGATATCAATCCATGCGACCAAAAGAACTCCGCCCTTGAATTCAAGTCTGTGGCATACTCTAAAACCGGATTCCCTAGCTGCAATTATGACCCACCCTTACTTTACTTACCAACCACTTGCTTTTTCCTTTTCTTTTTTCACGCCACATAAACACAAAACTTACAGCAATTCCCTTCAGGTTAAATATCTTCTCCTTTCTGTCCAATTCAGTCATAAGCCTTGCCAGTTGAGGAATGTAATGACCTGGTACATTTAGGAAAAAGATTCAGTTTTTTTTTCATGGCTTCCATTTTGGGAAAGATTGGAAGAGGGAGAGGGAAGATGATAAAACAGAGAAATGCGTTTGCGTGTCTGAGTACCTGCATAACTCTCCCCTGTTAGAAATATAGCTCTATGCTTGTAATGAGGGAACTTGTTGAACCACCTTTGCAAGAATATGAGATTGTCTTTTGCTGAAGTTATCAACAGGGGAAGACATAAGTTTGAAACAAAAATAGAAGGCAAGAATGCAACATGATTTGTTTTCTTTTCTACCACTAACAGAACTCGAGCTGCTTGCGGCGGTCCCAAGTGCTTAAAGAGTAGAAAGATACTTACAATATAGGCACCTTCATCAGTAATTTCATAGCCAAATCAATATTTATCTTCCTTGAACAGAAGGTATGCAACAATACCTGTGGCCTCGTCGTCCATTGTCCCATGAGAAGCGCTATCATGAGCATAAGAGAACCCAACTCCTGCTGGTGTCTCTAAGTATAACATGTTTGCTACTGAAATTATTGAATTTGCACTTGCCTTTACTGATCAGCAGCTATATAACATCCAGAACTATGAAGAAAACGGTCTGATTGATAGAGAAACAGATACCTCGGTTCCAGCTGTATTCATTTTTCACTAAAACCTCCCCGTTTGGCCTAAAAGGTCCATTTTCTGAGAACGCCCCAACTCCCAGGGAAGAACAACCAGGCCCTGCAAGAAATTTAAAAAAAAAAAAAAAATCCTCCCTAACCGTTGAGACAAAGTTCCATGGACCCCGAATACTAGTAATAGTGAAGAAGTTAAGTAAAGTAGTCAACCACACCTCCATTCAGCCAGAGAACCAAAGGCTTCGAAGAAGGGTCAGTTTCTGCCTCAACAAAGTAGTAAAACAGTGCTCTGTGCTTTTGGTCATCTACATGAATATAACCTGAAAACTGATGAAACCCCACTGGGGGCTGCCCTGGAAGGCTGATAATCTTGTCAGATTGAGCATAAGAGGGAACAATCTCCTTGCAAATGCAAAGATGAAGAATAAGAGCAGCCATTGTCATGGCCTTCCTTGTTGGAGAAAGCATGGTTTAGACAACGAGAGACAACAAAGAGAAGGACGTAGAGGAAGTGGTCTTTAAAATGTTGCTCAGCGGAGAAAAAGACATGGGGGAGGGCATGAATGGGGCACTAAATAAGCAGGCAATCTTATATTTAAAATCGCCATCATACTTGAGTCTTGTTACTGGGCAGGCCTGATATAGAATAGAATTAATTCATTTTGCAATTGGGTTGATGCCCAAGAGCATGATTTGGTAGGACACACTCAAAGCATAAAAGATTGTTTTTTGGAAAATGAAGAAACAAATAGAATACAAGGCTGCTTTATCAGAATTCAGAGCCCTGAAAGTACTGCTATGATGCTTCTCTATCTACTGTTGCCTTACAACAACAAAAAAGATGTATCCACAGCTTGAGTCTGTCATTCTTTTGTTATTATTATTCTTGTGGCGTACATTGTAAAGTGGTTTTACACAGCTAACTCGGAGATCAGTTCTACAGTTATTTGTAAGACAAGTTTCAACACTTTCTATTTGATTTCAAGTATGGTATGATTTTCTGACAGAGTGTTGACAGAATTTCAGGGGCTACTTGTAGTTCTAAGAGGAGACGATTGGTTTTGCTTGTTCAAATAAGATAATCTTGTCCAGGAGCACCAAATCGTCCTTCAAATAAGATAATCTTGAAGGCTTCAAAGGGACCCTCAAACTAAATATTGTCATGATTAAATATTTGCACACAGACGCAGATGCTTGAACCACATGTTCCCCATCATGCGTTGTCAA

mRNA sequence

CGCCATTTTTGTGAAGAAAGAAGAAGAAGAAGAAGACGAAGATGAACCAGGGGATACCTTTCCGCTTTCTGTTTCTGGGGGTGGTGGATGTTTTCTTTTAAAAAATAAAATGTATTATTTACTATTATTATTCTTTTTCGGGAGATGGAGGAGGAAGGCGTAGATCTCGATCTTCATCTTCATCTTCATCTAAGTCTACTTCCCCTTTTGCCTCCAAAATATTAGTAATATTCCCTCCTTAACTTCTTTATCCACTTTCTCAAATTGAATCAAATTGAATCGAATTAAATCAAATTAAATCAAATTACATCAAATTACATCAAATTAAATCAAATTAAATCAAATTAAGAGAGAAAGAAAGAACGAAATAACGAATGTGGCCTAAACCCTCCCATCTTTTGTTCGCTCGCTCTCTCTCGCTTCCTTCACGCTGGCTCCCCATCCATTTCAGTCGCTCATTGTCGCCACCGTCACCGCCCACTTTCTTCTGCTCGTGCCGCCGCGTCCTCCCTCTTAGCGAGTTCCACTGCTTTTCTACTCTCTTCTTATCACTGGTATTCTCCCTACTCCATCTACCTCTTTTTTCTCTCTCCAAAAACTCAAATTAGGACTTGTCTACTCAAACAATGGAGGAGTTGTACTTATTTCTTCTTCAATCAGCAGAACAGCAACGAAAATAAATTAGCCTTGCGGAAAATTACGACTTTTCGAACTTATCGTGACCTGCTTTTTTTTATTTCCGGCATATGTCTATTATCTTTTAGGGTTTGATAATCTGTATATCTCTTTTGTCTCTACTGAAATTTTCCTTGTTTCTAGTCTCCTAAATCTTCCAAAGCACCACCCCTATGAATATTCCTGCATCGCCCTTCTTCTCTACTTATCTAGAACTAGTTGAAGTAATCTATCGTATTCCAATTTTTCCTTACAAACAAATACACAGATATTCGAATTAAAGTAGTCTGTTTTATTTCGAGAACTTACTCCTCCATGCCTGGTTGTTTATGGCTCCTTCTAGCCAAACGCACACCACAGCTTAATGGTTTTTCATATTTACTCAAGCTTGTAACTTTGAGTTGATACTAAGGGAAGATGTCTTACAATAGATCTATTTGGATTTCAAGAAGCAAGCGGATCATTCTCAATTCACCAACTTCAACTGTGAGGGCACCAACAAACTTACAAACCTTACTCGATTACAAGCGCAATATATGTGTGGTCTACTTGGGCAATTCTCATTTGGGAATTGAAGTAATTTGCTTAGGAAAAAAAAGAAAAAAATTCCATTAGACATGACAGGATTTGGCTATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGAATGTCCATCAGAGGCTCTAAAGGTAAAGATCGCCGAGTTGGAGAGATTTAGGAAGAAGAAGAAAAGTGGCAAGCAGTTCATTGTGGACGTTCCTGAATCAAAATCCTTTCTTGACACTGCTTCTATGCCCATGATTCTAACTGCGGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGCTGATAGAGCGCAAAATAAAGAATTCTCCGCCAGGTCAAGGAACTGTGAGGATGCTTAGTCGGGAGGAGTGGGAGGAAATGCGAGAGGTTCGACCAAGGACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTGTACACAGGGAAGATTTGAAGGACTGGACAGTTGATGTGCTGTCAAATGCACTTACTCGGGCGGAAGAAAGTGTGAGGCATGATTCTACTTCCAGGTGACTTCTCCGAAGGGCCTTCTCCTAGATGTGGAGACTTTCAAACTCATCTGAGTTGGTGTTTGGTCATGCAAAATTGTTTTGTTGGGCGCAACTCCTGAAAATGTGCTTTGAAGGATGGTTGAGAACAATCAGGTCGCCATGAACCGGGATAGAGATAGTAGGTAATTTGATTGTGACTGAATCGCAAGTAGGTGGTGGAAAAGCTTAGATAGTGCTTCTTCTCTCAGCTTCCACCTACCGCCGAATCCACATTCCAAGATTAACCAGACGGCGGCGCTGATAGGGGCTCCATGCTATGGGGCTCTGCCTCCAACCGCTCATCTTTGAAATCCTCCTTCATCTCTCCCCTACGTCAGATTCCCTCCACAAGGAAGCAAAAGTGTGCTGTTGCAGCTGCCCCCAAGTTCTCCATGCGCGTCGCTTCCAAGCAAGCCTATATCTGTCGTGATTGCGGTCTGTGGTGCTCCTAAGCGACGATTTAGACCTTATGAGCAATCAGTGACTAAAAATGATAACGAATTTGATGTGAGGAAGGCAAGAAAGGCGCAGATTCAGAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCCGCTGCAGTGGGAATCCTGGCACTTGTAGGTTTATACCTGTACCTGAATAGCGTCTTTTAGATCGAGTGGCTTGCTCGATGACGGGGGCTTGACATCATTTGTTTCATCATTTTCTTCCCGAGGCTGTTTTCTATTGATTTAAATATTAAATGTATTTTTTCGACCCACTTTCCGAAAACCCTGGCAAATTGTTTATTGAGCGTTTATTTACACTCAGCAGAGTAGCCATTGGATCATATATGAACTGCCCATCGCCTTACCTTAGTTTATGTACCTGTGGATGTGGCTTTGGGTGTAATACTGACTTTGGGATGATTATATCTTGGAAGATTTTGTTTAACCAGTTTCTTCCATGGACTGGACAATTGATGTGCTTTTGGATTCGCTTATTCAGGGAGAAGGAAGTGTTAGACACGTTTCTAAGCGACCGCCCTCAACATTGTCCTAAATTGTGGGACAAATCAGGCTCACCTACACTTCCTTTATGGTTATGTAAAACTATTTAAGGTGCAGAACCAGGAAGTGTGTGCTTCCCAGGATGGTTAGCAAGGCATCTGAGAAATGAACCTTTTGACCTTATGTGATTTGGGTCTGTAGGTTTTCCCGAGTATCAGTTGGTTTAGCACATTGTTAACATTATATGTAGAGGAATCAGAGTTAGAGAAAGTAGTGAATTGCAAATGGGAGGTTGTTTTTCATTGCCAAGAATGCTTGATCGTCTCTTTTACATTAAGTCTGCATCAGAAAACTTGGGGTGGAGGCCTGTTATCCAGAAACGACTTGAATAGCAGAAGTGACCTTTGAGGTTGCGAGAATGGTGCTTCATGAGAGGCACCTCGAATGGTCGCGAATGAAAGGATACCACCATAAACTTGGGTCCAACCTGCGACCTGAGACAGACGGGGAAATGCTCAATTGAATTGCGCAATTCGAAATCAGGACAGATAGCGAGCGGTTACCTGCTTTCCCTGGAACCAAGCACCGTATGGAACACTAGTGTTAAGACCCAGCTCTGTTGCCAACCTATCAACCAACCGACGACTACCCATCAATGGAATTACTGAATCCTGATCGCCACTGGCAACAGAAAATGAAATAAGAAAGAATAGGTGTTGCGTAGAGATCCATCTGATTTATGGTTTTGATAAGGTAATGTACATACACCTACCTGTAAATCAAGACCCGTATGCCGGCTTTAACAAGTGACCCAACAATGGAAATGGTAGGAATTTCCAGGTTGAGAAGCTCGTAGTCCAGGGCTCTGGTGTGATCAGTGATGTCAAATAAGAGTCAGAAACGAGAATGGTGTACACAATAATGTAATACAAGGTCAAAGCCCAGTTGAATTACTCGCTGCAGACAGCCCAGTTGTGGACTCCGACAAGACGGGCGTGAAGAGCCTTTTTCACATCCTCTCGGTTCAGATATTTAACAGTTTCATCTTCAATGCAAACATCTATCCTCTCTCGGACATGCTGCCAAATTAAGTATCCTTAAACACCACAAATTTATTATTTAGAGAAGAAAAGAGTATTTAGTACCTGTGGGCTTAAATACTTGGACTGCGAGAGCACTGAAGGAATACAGACATCAAGAGTAACGTCATATTTGTCCACGAATTTACTGGTTTCTGTATTGACTTGGGTCATCACCCTCAAACAAACCCCTGAGATGGAGTCTCTGTAGTACTCACTAACGTATCGGGAATAGTTACAAGCAGCAGTGAACAATGTGTAAGTGGAGTCTGATATCAATCCATGCGACCAAAAGAACTCCGCCCTTGAATTCAAGTCTGTGGCATACTCTAAAACCGGATTCCCTAGCTGCAATTATGACCCACCCTTACTTTACTTACCAACCACTTGCTTTTTCCTTTTCTTTTTTCACGCCACATAAACACAAAACTTACAGCAATTCCCTTCAGGTTAAATATCTTCTCCTTTCTGTCCAATTCAGTCATAAGCCTTGCCAGTTGAGGAATGTAATGACCTGGTACATTTAGGAAAAAGATTCAGTTTTTTTTTCATGGCTTCCATTTTGGGAAAGATTGGAAGAGGGAGAGGGAAGATGATAAAACAGAGAAATGCGTTTGCGTGTCTGAGTACCTGCATAACTCTCCCCTGTTAGAAATATAGCTCTATGCTTGTAATGAGGGAACTTGTTGAACCACCTTTGCAAGAATATGAGATTGTCTTTTGCTGAAGTTATCAACAGGGGAAGACATAAGTTTGAAACAAAAATAGAAGGCAAGAATGCAACATGATTTGTTTTCTTTTCTACCACTAACAGAACTCGAGCTGCTTGCGGCGGTCCCAAGTGCTTAAAGAGTAGAAAGATACTTACAATATAGGCACCTTCATCAGTAATTTCATAGCCAAATCAATATTTATCTTCCTTGAACAGAAGGTATGCAACAATACCTGTGGCCTCGTCGTCCATTGTCCCATGAGAAGCGCTATCATGAGCATAAGAGAACCCAACTCCTGCTGGTGTCTCTAAGTATAACATGTTTGCTACTGAAATTATTGAATTTGCACTTGCCTTTACTGATCAGCAGCTATATAACATCCAGAACTATGAAGAAAACGGTCTGATTGATAGAGAAACAGATACCTCGGTTCCAGCTGTATTCATTTTTCACTAAAACCTCCCCGTTTGGCCTAAAAGGTCCATTTTCTGAGAACGCCCCAACTCCCAGGGAAGAACAACCAGGCCCTGCAAGAAATTTAAAAAAAAAAAAAAAATCCTCCCTAACCGTTGAGACAAAGTTCCATGGACCCCGAATACTAGTAATAGTGAAGAAGTTAAGTAAAGTAGTCAACCACACCTCCATTCAGCCAGAGAACCAAAGGCTTCGAAGAAGGGTCAGTTTCTGCCTCAACAAAGTAGTAAAACAGTGCTCTGTGCTTTTGGTCATCTACATGAATATAACCTGAAAACTGATGAAACCCCACTGGGGGCTGCCCTGGAAGGCTGATAATCTTGTCAGATTGAGCATAAGAGGGAACAATCTCCTTGCAAATGCAAAGATGAAGAATAAGAGCAGCCATTGTCATGGCCTTCCTTGTTGGAGAAAGCATGGTTTAGACAACGAGAGACAACAAAGAGAAGGACGTAGAGGAAGTGGTCTTTAAAATGTTGCTCAGCGGAGAAAAAGACATGGGGGAGGGCATGAATGGGGCACTAAATAAGCAGGCAATCTTATATTTAAAATCGCCATCATACTTGAGTCTTGTTACTGGGCAGGCCTGATATAGAATAGAATTAATTCATTTTGCAATTGGGTTGATGCCCAAGAGCATGATTTGGTAGGACACACTCAAAGCATAAAAGATTGTTTTTTGGAAAATGAAGAAACAAATAGAATACAAGGCTGCTTTATCAGAATTCAGAGCCCTGAAAGTACTGCTATGATGCTTCTCTATCTACTGTTGCCTTACAACAACAAAAAAGATGTATCCACAGCTTGAGTCTGTCATTCTTTTGTTATTATTATTCTTGTGGCGTACATTGTAAAGTGGTTTTACACAGCTAACTCGGAGATCAGTTCTACAGTTATTTGTAAGACAAGTTTCAACACTTTCTATTTGATTTCAAGTATGGTATGATTTTCTGACAGAGTGTTGACAGAATTTCAGGGGCTACTTGTAGTTCTAAGAGGAGACGATTGGTTTTGCTTGTTCAAATAAGATAATCTTGTCCAGGAGCACCAAATCGTCCTTCAAATAAGATAATCTTGAAGGCTTCAAAGGGACCCTCAAACTAAATATTGTCATGATTAAATATTTGCACACAGACGCAGATGCTTGAACCACATGTTCCCCATCATGCGTTGTCAA

Coding sequence (CDS)

ATGACAGGATTTGGCTATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGAATGTCCATCAGAGGCTCTAAAGGTAAAGATCGCCGAGTTGGAGAGATTTAGGAAGAAGAAGAAAAGTGGCAAGCAGTTCATTGTGGACGTTCCTGAATCAAAATCCTTTCTTGACACTGCTTCTATGCCCATGATTCTAACTGCGGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGCTGATAGAGCGCAAAATAAAGAATTCTCCGCCAGGTCAAGGAACTGTGAGGATGCTTAGTCGGGAGGAGTGGGAGGAAATGCGAGAGGTTCGACCAAGGACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTGTACACAGGGAAGATTTGAAGGACTGGACAGTTGATGTGCTGTCAAATGCACTTACTCGGGCGGAAGAAAGTGTGAGGCATGATTCTACTTCCAGGTGA

Protein sequence

MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGKQFIVDVPESKSFLDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREVRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDSTSR

Homology

[Close]

BLAST of Cp4.1LG18g09420 vs. TrEMBL
Match: A0A0A0LR33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000630 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 8.4e-76
Identity = 152/176 (86.36%), Postives = 162/176 (92.05%), Query Frame = 1


Query: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK--QFIVDVPESKSF 60
           MTGFG+GLRV+ RQMHLL QRE PSE LK KIAELE+FRK K+S K  QF VDVPES SF
Sbjct: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60

Query: 61  LDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMR 120
           LDT SMPMILTAVG+ALFAKLLMMYDESRSEELIERKIKN+PPGQGTVRMLSR+EWEE+R
Sbjct: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDSTSR 175
           EVRPRTPFESKLARPNARIRTGEP+H EDLKDWTVDVLSNALTRAEESVRH STS+
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 176

[Close]

BLAST of Cp4.1LG18g09420 vs. TrEMBL
Match: A0A067K1E6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18526 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.2e-55
Identity = 117/171 (68.42%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 6   YGLR----VLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK-QFIVDVPESKSFLD 65
           YG+R    + RR  H L  R+ P+E LK ++AEL++ RKKK   K +  V+VPESKSFLD
Sbjct: 2   YGVRETRLLCRRGFHTLS-RDGPTETLKRRVAELQKTRKKKNPKKHEVFVEVPESKSFLD 61

Query: 66  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREV 125
           TA+MPMILT VG AL AKLLMM+D+S+S+E+IERKIKN+PPGQGTVRML+REEWEE+REV
Sbjct: 62  TATMPMILTVVGTALVAKLLMMHDDSKSQEMIERKIKNAPPGQGTVRMLTREEWEEIREV 121

Query: 126 RPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDS 172
           RPRTPFESKLARPNARIRTGE +H +DLKDWT+DVL++A+TR EESV+ +S
Sbjct: 122 RPRTPFESKLARPNARIRTGESLHLQDLKDWTIDVLTDAVTRVEESVKSNS 171

[Close]

BLAST of Cp4.1LG18g09420 vs. TrEMBL
Match: V4UA82_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016955mg PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.2e-55
Identity = 113/172 (65.70%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGKQFI-VDVPESKSFL 60
           M G G  L +++R++H L  R+ PSE+LK ++AELE+ RK+K   K  + V+VPESKSFL
Sbjct: 1   MFGVGQRLFLVQRRLHTLS-RDGPSESLKKRVAELEKTRKRKNVKKNDVFVEVPESKSFL 60

Query: 61  DTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMRE 120
           DTAS+PM LT   +ALFAKLLMMYD+S+S+E+IE KIKN+PPGQGT+RML+ EEWEE +E
Sbjct: 61  DTASLPMFLTVAAIALFAKLLMMYDDSKSQEMIEHKIKNAPPGQGTMRMLTHEEWEEFQE 120

Query: 121 VRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDS 172
           VRPRTPFESKLARPNA++RTGEP+   DLKDWT+DVL++ALTRAEE  RH+S
Sbjct: 121 VRPRTPFESKLARPNAKLRTGEPLRMGDLKDWTIDVLTDALTRAEECARHNS 171

[Close]

BLAST of Cp4.1LG18g09420 vs. TrEMBL
Match: A0A068V7J2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018400001 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-54
Identity = 113/168 (67.26%), Postives = 137/168 (81.55%), Query Frame = 1


Query: 5   GYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK-QFIVDVPESKSFLDTAS 64
           G   +  +++ H L +   PSE LK +IAE+ER RK++   K Q  ++VPESKSFLDTA+
Sbjct: 6   GILFQTCKKKFHCLSRDAGPSEVLKKRIAEMERKRKRRDPRKNQLFIEVPESKSFLDTAT 65

Query: 65  MPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREVRPR 124
           MPMILT  G ALFAKLLMM DES+S+E+IERKIKN+PPGQG+VRML+REEWEE+REVRPR
Sbjct: 66  MPMILTVAGTALFAKLLMMLDESKSQEMIERKIKNAPPGQGSVRMLTREEWEEVREVRPR 125

Query: 125 TPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDS 172
            PFESKLARPNARIRTGEP+H ED+KDWT+DVL++  TRAEE VR  S
Sbjct: 126 MPFESKLARPNARIRTGEPLHWEDVKDWTIDVLTDGFTRAEECVRRRS 173

[Close]

BLAST of Cp4.1LG18g09420 vs. TrEMBL
Match: A0A0D2Q0T7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G046300 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.4e-54
Identity = 106/161 (65.84%), Postives = 137/161 (85.09%), Query Frame = 1


Query: 10  VLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK-QFIVDVPESKSFLDTASMPMIL 69
           + RR +H L + + PSE LK K+ E+E+ RK++   K Q  V+VPES+SFLDTA++PM L
Sbjct: 13  LFRRLLHTLSRDDGPSETLKKKVPEIEKTRKRRNPKKAQLFVEVPESRSFLDTATLPMYL 72

Query: 70  TAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREVRPRTPFES 129
              G+ALFAKLLMM+DES+S+E+IERKIKN+PPGQGT+RML+REEWEE+REVRPRTPFES
Sbjct: 73  AVAGIALFAKLLMMHDESKSQEMIERKIKNAPPGQGTIRMLTREEWEEIREVRPRTPFES 132

Query: 130 KLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRH 170
           KLARPNA+IRTGEP+H ED+K+WT+D+L++ALTRAE   +H
Sbjct: 133 KLARPNAKIRTGEPLHMEDMKNWTIDILTDALTRAENCSKH 173

[Close]

BLAST of Cp4.1LG18g09420 vs. TAIR10
Match: AT2G04340.1 (AT2G04340.1 unknown protein)

HSP 1 Score: 211.5 bits (537), Expect = 4.3e-55
Identity = 106/164 (64.63%), Postives = 138/164 (84.15%), Query Frame = 1


Query: 10  VLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK-QFIVDVPESKSFLDTASMPMIL 69
           +LRR+ H     + P+E L+ KIA+L++ +K++   K QF+V+VPES+S+LDTA+MPM L
Sbjct: 11  LLRRRFHS-PSNDAPTETLRKKIADLQKSKKRRNPIKNQFLVEVPESRSYLDTATMPMFL 70

Query: 70  TAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREVRPRTPFES 129
             VG+ALFAK+LMM D+S+S+E+IERKIKN+P GQGTVRM+ REEW+E REVRPRTPFES
Sbjct: 71  AVVGIALFAKVLMMIDDSKSQEMIERKIKNAPQGQGTVRMIDREEWDEFREVRPRTPFES 130

Query: 130 KLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDST 173
           KLARPNA+IRTGEPV ++DLK+WT+DVL+NAL R EESVR  S+
Sbjct: 131 KLARPNAQIRTGEPVRKDDLKNWTIDVLTNALERTEESVRRGSS 173

[Close]

BLAST of Cp4.1LG18g09420 vs. NCBI nr
Match: gi|659128795|ref|XP_008464374.1| (PREDICTED: uncharacterized protein LOC103502279 isoform X1 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 153/176 (86.93%), Postives = 165/176 (93.75%), Query Frame = 1


Query: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK--QFIVDVPESKSF 60
           MTGFG+GLRV+ RQ+HLLQQRE PSE L+ KIAELE+FRK+KKS K  QFIVDVPES SF
Sbjct: 1   MTGFGHGLRVIGRQVHLLQQREGPSEVLRGKIAELEKFRKRKKSMKKDQFIVDVPESNSF 60

Query: 61  LDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMR 120
           LDT SMPMILTAVG+ALFAKLLMMYDESRSEELIERKIKN+PPGQGTVRMLSREEWEE+R
Sbjct: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSREEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDSTSR 175
           EVRPRTPFESKLARPNARIRTGEP+H EDLKDWTVDV+SNALTRAEESVRH STS+
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVVSNALTRAEESVRHGSTSK 176

[Close]

BLAST of Cp4.1LG18g09420 vs. NCBI nr
Match: gi|449440500|ref|XP_004138022.1| (PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75
Identity = 152/176 (86.36%), Postives = 162/176 (92.05%), Query Frame = 1


Query: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK--QFIVDVPESKSF 60
           MTGFG+GLRV+ RQMHLL QRE PSE LK KIAELE+FRK K+S K  QF VDVPES SF
Sbjct: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60

Query: 61  LDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMR 120
           LDT SMPMILTAVG+ALFAKLLMMYDESRSEELIERKIKN+PPGQGTVRMLSR+EWEE+R
Sbjct: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDSTSR 175
           EVRPRTPFESKLARPNARIRTGEP+H EDLKDWTVDVLSNALTRAEESVRH STS+
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 176

[Close]

BLAST of Cp4.1LG18g09420 vs. NCBI nr
Match: gi|568830274|ref|XP_006469426.1| (PREDICTED: uncharacterized protein LOC102609354 [Citrus sinensis])

HSP 1 Score: 223.8 bits (569), Expect = 2.4e-55
Identity = 114/172 (66.28%), Postives = 144/172 (83.72%), Query Frame = 1


Query: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGKQFI-VDVPESKSFL 60
           M G G  L +++R++H L  R+ PSE+LK ++AELE+ RK+K   K  + V+VPESKSFL
Sbjct: 1   MFGVGQRLFLVQRRLHTLS-RDGPSESLKKRVAELEKTRKRKNVKKNDVFVEVPESKSFL 60

Query: 61  DTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMRE 120
           DTAS+PM LT   +ALFAKLLMMYD+S+S+E+IE KIKN+PPGQGT+RML+REEWEE +E
Sbjct: 61  DTASLPMFLTVAAIALFAKLLMMYDDSKSQEMIEHKIKNAPPGQGTMRMLTREEWEEFQE 120

Query: 121 VRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDS 172
           VRPRTPFESKLARPNA++RTGEP+   DLKDWT+DVL++ALTRAEE  RH+S
Sbjct: 121 VRPRTPFESKLARPNAKLRTGEPLRMGDLKDWTIDVLTDALTRAEECARHNS 171

[Close]

BLAST of Cp4.1LG18g09420 vs. NCBI nr
Match: gi|643718858|gb|KDP29957.1| (hypothetical protein JCGZ_18526 [Jatropha curcas])

HSP 1 Score: 221.9 bits (564), Expect = 9.0e-55
Identity = 117/171 (68.42%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 6   YGLR----VLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK-QFIVDVPESKSFLD 65
           YG+R    + RR  H L  R+ P+E LK ++AEL++ RKKK   K +  V+VPESKSFLD
Sbjct: 2   YGVRETRLLCRRGFHTLS-RDGPTETLKRRVAELQKTRKKKNPKKHEVFVEVPESKSFLD 61

Query: 66  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREV 125
           TA+MPMILT VG AL AKLLMM+D+S+S+E+IERKIKN+PPGQGTVRML+REEWEE+REV
Sbjct: 62  TATMPMILTVVGTALVAKLLMMHDDSKSQEMIERKIKNAPPGQGTVRMLTREEWEEIREV 121

Query: 126 RPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDS 172
           RPRTPFESKLARPNARIRTGE +H +DLKDWT+DVL++A+TR EESV+ +S
Sbjct: 122 RPRTPFESKLARPNARIRTGESLHLQDLKDWTIDVLTDAVTRVEESVKSNS 171

[Close]

BLAST of Cp4.1LG18g09420 vs. NCBI nr
Match: gi|802671410|ref|XP_012081518.1| (PREDICTED: uncharacterized protein LOC105641542 isoform X3 [Jatropha curcas])

HSP 1 Score: 221.9 bits (564), Expect = 9.0e-55
Identity = 117/171 (68.42%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 6   YGLR----VLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSGK-QFIVDVPESKSFLD 65
           YG+R    + RR  H L  R+ P+E LK ++AEL++ RKKK   K +  V+VPESKSFLD
Sbjct: 3   YGVRETRLLCRRGFHTLS-RDGPTETLKRRVAELQKTRKKKNPKKHEVFVEVPESKSFLD 62

Query: 66  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREV 125
           TA+MPMILT VG AL AKLLMM+D+S+S+E+IERKIKN+PPGQGTVRML+REEWEE+REV
Sbjct: 63  TATMPMILTVVGTALVAKLLMMHDDSKSQEMIERKIKNAPPGQGTVRMLTREEWEEIREV 122

Query: 126 RPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDS 172
           RPRTPFESKLARPNARIRTGE +H +DLKDWT+DVL++A+TR EESV+ +S
Sbjct: 123 RPRTPFESKLARPNARIRTGESLHLQDLKDWTIDVLTDAVTRVEESVKSNS 172

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g09420 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g09420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR33_CUCSA	8.4e-76	86.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000630 PE=4 SV=1	[more]
A0A067K1E6_JATCU	6.2e-55	68.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18526 PE=4 SV=1	[more]
V4UA82_9ROSI	6.2e-55	65.70	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016955mg PE=4 SV=1	[more]
A0A068V7J2_COFCA	1.8e-54	67.26	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018400001 PE=4 SV=1	[more]
A0A0D2Q0T7_GOSRA	2.4e-54	65.84	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G046300 PE=4 SV=1	[more]

BLAST of Cp4.1LG18g09420 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04340.1	4.3e-55	64.63	unknown protein	[more]

BLAST of Cp4.1LG18g09420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128795\|ref\|XP_008464374.1\|	1.4e-76	86.93	PREDICTED: uncharacterized protein LOC103502279 isoform X1 [Cucumis melo]	[more]
gi\|449440500\|ref\|XP_004138022.1\|	1.2e-75	86.36	PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus]	[more]
gi\|568830274\|ref\|XP_006469426.1\|	2.4e-55	66.28	PREDICTED: uncharacterized protein LOC102609354 [Citrus sinensis]	[more]
gi\|643718858\|gb\|KDP29957.1\|	9.0e-55	68.42	hypothetical protein JCGZ_18526 [Jatropha curcas]	[more]
gi\|802671410\|ref\|XP_012081518.1\|	9.0e-55	68.42	PREDICTED: uncharacterized protein LOC105641542 isoform X3 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005506	iron ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g09420.1	Cp4.1LG18g09420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36008	FAMILY NOT NAMED	coord: 1..172 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g09420	CmaCh10G000230	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g09420	Lsi06G016780	Bottle gourd (USVL1VR-Ls)	cpelsiB298
Cp4.1LG18g09420	CsaV3_1G000130	Cucumber (Chinese Long) v3	cpecucB0442
Cp4.1LG18g09420	Bhi02G000473	Wax gourd	cpewgoB0471
Cp4.1LG18g09420	CsGy1G000100	Cucumber (Gy14) v2	cgybcpeB053

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g09420	Cucurbita pepo (Zucchini)	cpecpeB361
Cp4.1LG18g09420	Cucumber (Gy14) v1	cgycpeB0420
Cp4.1LG18g09420	Cucurbita maxima (Rimu)	cmacpeB133
Cp4.1LG18g09420	Cucurbita moschata (Rifu)	cmocpeB055
Cp4.1LG18g09420	Cucurbita moschata (Rifu)	cmocpeB109
Cp4.1LG18g09420	Wild cucumber (PI 183967)	cpecpiB361
Cp4.1LG18g09420	Cucumber (Chinese Long) v2	cpecuB361
Cp4.1LG18g09420	Watermelon (Charleston Gray)	cpewcgB336
Cp4.1LG18g09420	Watermelon (97103) v1	cpewmB373
Cp4.1LG18g09420	Melon (DHL92) v3.5.1	cpemeB328
Cp4.1LG18g09420	Cucumber (Gy14) v2	cgybcpeB361
Cp4.1LG18g09420	Melon (DHL92) v3.6.1	cpemedB386
Cp4.1LG18g09420	Silver-seed gourd	carcpeB0508
Cp4.1LG18g09420	Silver-seed gourd	carcpeB0863
Cp4.1LG18g09420	Cucumber (Chinese Long) v3	cpecucB0457