Lsi06G016780 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGATTTGGGAATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGAAGGTCCATCAGAGGTTCTAAAGGGAAAGATCGCAGAGTTGGAGAGATTTAGGAAGAGGAAGAAAAGTATGAAGAAGGATCAGTTCATTGTGGACGTTCCTGAATCAAAATCCTTCCTTGACACTGCTTCTATGCCCATGATTCTCACTGCTGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGGTATGCGCTACTCCTCAACTTGGTTCTGTTTCCTCTATTTCCCTTATTTGATTATTTTATTGAGTATACTGAAATATCATGAGACTTTTGTGTGTAGTAGTGTAGGACATGTATACATTTGTACGTGGGTTATGTTTGCAGGAAAGGAAAGAAACTTGTTGGAGAAGTGGGTTTTCATTTTTTATTTTATTTATTTTTTCAATCTCTCCCAAACAGAGACATTTCGATTTAAAAATGGAAGAAGATCTGGACCGAGAAAAATGCAATCAATTATAATCAAACTCTGTTATTTTGATTTACATTTCGCCTGTTTTCTGTGGTGAAAGAAGCAGATTTCTGTGAGAAATGATTCTTGGAGGGGAAAACCTGGATAAAAAATTTCTAGCACTGACGGTTTATTTTCTAGATGGATATTGCAGTCTCTATTCTTTCTGTTCTGATTGTCTTCATCCAGACTTTTGTGTGTAGTAGTGTAGGACATGTAAACATGTTCAAGATTTTTCCTCAGCTTTTCTCTTAATTTCAGGCGGCAATTTCTTAACCCAACCCCTATGTTGTTTCTTTGCCTTTCGACTACTTCTCTTCAACAACCCAAAGTGCATTCGGCTCTTTTACTTTCATCGATTTTGTTTTTGGATCATTCAACCATGATCAAGAAAACCCTTGGTTTGATCTCAAATTGGTTTGATCATTGATGTTCATCTTCTTGAGCAAGATTTTTGTAGTGTCAATGGTGATAACGCCATATCCCAAGCTTGAAATTTCCAAAGACCTTTGTTTTTCAAAGTATTGAGAATAGACAAAAAGGCAAAAAAGTAAAAAAAAAAAAGTGATTAAGAAGTAGGTGTCCAATTCGTGTGCAATGTGAATTAGACAGAAATGAGAAAATTGTCCATCATGTGCTTTAATGGGTGATTCAAACGAAAAGTTAACAAAGGGTCTACATTTCAACACTAATGCAAGTTTGGGGTTCAATTTGAATAAATAAATCAGGAGTGTCCGAAACAGTTTGTGCATACCTTAACTATTCTTACAAGACAGCCGCCTAACTTTACATTTAGTTATCAAGGAAACTATGACTTGAATCCATTTCTTCTCGGCCCTTTATTACTTCTTGGCTCTTATTATCCACTAGGTCAAGGTCAACCCATGGTGATTGACTTCAATTTTTTCCTACGTCCAATGTACTCCTCGATTGTCTTGGCTGTGTGGCTCATCTCCCTCTGTCTCTCTCTTTTGACATTAAAATTTTATCTGTTCTTCCTTAGCCTTGAAACATGAAATTGAAATGAGTAGTGTTTAGATTTTAGTGTGATGAGTAGTTGTCTTTCCTCATTTTGTCCGGGGAAGTCTCTGATATGGAGGTTAAGTGTGAACCATAAGTTTTATGCCGCCTGCAAACAATTATTTATATTGCCAATGGGGAAATTGAGAATCTCAAAATAAAAGAACCAATTAAAAGGATACTCTAGTGGATGTGGTTGGTTTGCTTTATTCTATTTTATTAATGCCACCGGTTTGCCTGCGCTTGGAAGAATCTTGTGAACATATCCTGTCATTCAATTAATGTTTTGCAATGTTTTTAGGAAAATTTTAAGCCCTTTTAATGAAATTATGATCTTATTTTATCATGTACTGAATGTATAGTATAAGTTCAGTGCCCATTGATGGTTGGGTTTATTTCAAGCAAATCTTGTTTATCCCTTTTCATGTGTACCTGTTCTTATCCAAAAAATGTGTACCCGTGCTTTTTTTTCAGTATGATGAGTCAAGATCTGAAGAGTTGATAGAGCGCAAAATAAAGAATGCTCCACCAGGTCAAGGAACTGTGAGGATGCTTAGTCGTGAGGAGTGGGAGGAAATTCGAGATGTTCGACCAAGAACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACATGGTAAGGCTGTTGTATCACTGATCTCATATGGAAATTGATCATGTGAAAGCCTACACATTTCTCATCTTTTATCCCATCCTAAGTGATGGTAATGTGCTTCCCTGTTTCCATCCTAGTTACTGATTTGCTTGATCTACTTCGTTGAAACTTCCCAGTTTCTATCAAATATGTGGATACATTTTCAACTACTGCAGTTAATTTTAAAATAGGAGGCCTAAGCCTAACAGATAAATTTTTTTAAAAAAATACTTGCTTTGGCAATCGTTTCATGCAGGAAGATTTGAAGGATTGGACAATTGATGTGCTGTCAGATGCACTTACTCGAGCTGAAGAAAGTGTTAGGCATGGTTCCACTTCCAAGTAACCTCAGAGACTGAAGAGTCTTCTCCAAGATTTGGAGGATTTCAGACTCATCTCAACTGGTGTTTGGTCATGCAAAATTGTTTGAGGTTTAACTCCTGAAAATTGTGCTTTGAAGGATGGTTAGTAACACATTTAAAAATTAGCTTGTTTCTATGTTTGATCTGATATTGATCATGTAGGTCTCCTGTTGGTATTTTATGTAGAAGATTATCAGGTAGCGATGGGTCAGGATAGAGAAAGTAGGTAATAAATTGTGACTGAATTGCAAATTAGTGGTGGAAATTGAAAAGCCTGGATAGTGTTGGATGGTTTATGCAATTCCATAAACAAGGGGTTTGGCGGCAGAAACCAGTTGTGATCGTCCTATTATTTGTATCTTGGTTAAACATGTTAACCTCGCAAAGTCATTCAAATTTATTTATTTATTTAGTCGAACAAGTAGAGCGTTTGGCAATTTTGATTTTTGGTTGCTTTTTTAATTGTTTGGTTGTCTCAGGGGAAAACAACCATTGTTTGGTTGCTAAATTTTATTATTATTATTATTATTATTAACAGCAGCTGGTGTATAAAAACCATGATTAATTTCATAATTTTAGACCATAGACATTTTACTCATAAAATGAATTCCATGTCAAAG ATGACAGGATTTGGGAATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGAAGGTCCATCAGAGGTTCTAAAGGGAAAGATCGCAGAGTTGGAGAGATTTAGGAAGAGGAAGAAAAGTATGAAGAAGGATCAGTTCATTGTGGACGTTCCTGAATCAAAATCCTTCCTTGACACTGCTTCTATGCCCATGATTCTCACTGCTGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGTTGATAGAGCGCAAAATAAAGAATGCTCCACCAGGTCAAGGAACTGTGAGGATGCTTAGTCGTGAGGAGTGGGAGGAAATTCGAGATGTTCGACCAAGAACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACATGGAAGATTTGAAGGATTGGACAATTGATGTGCTGTCAGATGCACTTACTCGAGCTGAAGAAAGTGTTAGGCATGGTTCCACTTCCAAGTCTCCTGTTGGTATTTTATGTAGAAGATTATCAGGTAGCGATGGGTCAGGATAGAGAAAGTAGGTAATAAATTGTGACTGAATTGCAAATTAGTGGTGGAAATTGAAAAGCCTGGATAGTGTTGGATGGTTTATGCAATTCCATAAACAAGGGGTTTGGCGGCAGAAACCAGTTGTGATCGTCCTATTATTTGTATCTTGGTTAAACATGTTAACCTCGCAAAGTCATTCAAATTTATTTATTTATTTAGTCGAACAAGTAGAGCGTTTGGCAATTTTGATTTTTGGTTGCTTTTTTAATTGTTTGGTTGTCTCAGGGGAAAACAACCATTGTTTGGTTGCTAAATTTTATTATTATTATTATTATTATTAACAGCAGCTGGTGTATAAAAACCATGATTAATTTCATAATTTTAGACCATAGACATTTTACTCATAAAATGAATTCCATGTCAAAG ATGACAGGATTTGGGAATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGAAGGTCCATCAGAGGTTCTAAAGGGAAAGATCGCAGAGTTGGAGAGATTTAGGAAGAGGAAGAAAAGTATGAAGAAGGATCAGTTCATTGTGGACGTTCCTGAATCAAAATCCTTCCTTGACACTGCTTCTATGCCCATGATTCTCACTGCTGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGTTGATAGAGCGCAAAATAAAGAATGCTCCACCAGGTCAAGGAACTGTGAGGATGCTTAGTCGTGAGGAGTGGGAGGAAATTCGAGATGTTCGACCAAGAACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACATGGAAGATTTGAAGGATTGGACAATTGATGTGCTGTCAGATGCACTTACTCGAGCTGAAGAAAGTGTTAGGCATGGTTCCACTTCCAAGTCTCCTGTTGGTATTTTATGTAGAAGATTATCAGGTAGCGATGGGTCAGGATAG MTGFGNGLRVLRRQMHLLQQREGPSEVLKGKIAELERFRKRKKSMKKDQFIVDVPESKSFLDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSREEWEEIRDVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTIDVLSDALTRAEESVRHGSTSKSPVGILCRRLSGSDGSG
BLAST of Lsi06G016780 vs. TrEMBL
Match: A0A0A0LR33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000630 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.2e-83 Identity = 160/176 (90.91%), Postives = 169/176 (96.02%), Query Frame = 1
BLAST of Lsi06G016780 vs. TrEMBL
Match: A0A061F9Y0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_032134 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 4.2e-60 Identity = 118/156 (75.64%), Postives = 141/156 (90.38%), Query Frame = 1
BLAST of Lsi06G016780 vs. TrEMBL
Match: V4UA82_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016955mg PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.2e-59 Identity = 121/173 (69.94%), Postives = 144/173 (83.24%), Query Frame = 1
BLAST of Lsi06G016780 vs. TrEMBL
Match: A0A0D2NIA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G046300 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.5e-59 Identity = 114/162 (70.37%), Postives = 141/162 (87.04%), Query Frame = 1
BLAST of Lsi06G016780 vs. TrEMBL
Match: A0A0D2Q0T7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G046300 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.5e-59 Identity = 114/162 (70.37%), Postives = 141/162 (87.04%), Query Frame = 1
BLAST of Lsi06G016780 vs. TAIR10
Match: AT2G04340.1 (AT2G04340.1 unknown protein) HSP 1 Score: 216.5 bits (550), Expect = 1.5e-56 Identity = 107/165 (64.85%), Postives = 140/165 (84.85%), Query Frame = 1
BLAST of Lsi06G016780 vs. NCBI nr
Match: gi|659128795|ref|XP_008464374.1| (PREDICTED: uncharacterized protein LOC103502279 isoform X1 [Cucumis melo]) HSP 1 Score: 324.3 bits (830), Expect = 1.4e-85 Identity = 163/176 (92.61%), Postives = 173/176 (98.30%), Query Frame = 1
BLAST of Lsi06G016780 vs. NCBI nr
Match: gi|449440500|ref|XP_004138022.1| (PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus]) HSP 1 Score: 317.4 bits (812), Expect = 1.7e-83 Identity = 160/176 (90.91%), Postives = 169/176 (96.02%), Query Frame = 1
BLAST of Lsi06G016780 vs. NCBI nr
Match: gi|568830274|ref|XP_006469426.1| (PREDICTED: uncharacterized protein LOC102609354 [Citrus sinensis]) HSP 1 Score: 239.6 bits (610), Expect = 4.6e-60 Identity = 122/173 (70.52%), Postives = 145/173 (83.82%), Query Frame = 1
BLAST of Lsi06G016780 vs. NCBI nr
Match: gi|590611105|ref|XP_007022007.1| (Uncharacterized protein TCM_032134 [Theobroma cacao]) HSP 1 Score: 239.2 bits (609), Expect = 6.0e-60 Identity = 118/156 (75.64%), Postives = 141/156 (90.38%), Query Frame = 1
BLAST of Lsi06G016780 vs. NCBI nr
Match: gi|567911033|ref|XP_006447830.1| (hypothetical protein CICLE_v10016955mg [Citrus clementina]) HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59 Identity = 121/173 (69.94%), Postives = 144/173 (83.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |