CsaV3_1G000130 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000130
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCytoplasmic dynein 2 light intermediate chain
Locationchr1 : 109624 .. 115229 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGGATTTGGGCATGGACTGCGTGTAATTGGGAGACAGATGCATCTCCTTCATCAACGTGAAGGTCCATCAGAGGTTCTAAAGGGAAAGATCGCAGAGCTGGAGAAATTTAGGAAGATGAAGAGAAGTACGAAGAAGGATCAGTTCACTGTGGACGTTCCTGAATCAAATTCCTTCCTTGATACTCCTTCTATGCCCATGATCCTCACTGCTGTTGGAATTGCTCTCTTCGCTAAACTCCTTATGATGGTATGTGCTATCCCTCAACTTGGTTCTGTTTCCTGCATTTCTGTTAACATCTGTAGACATCTCAGTGAGAATAGACTCTCTCTTTTCTTTTTCTTTATCATTGGAGATTCTCCAACCTAGTGGAATCATTGAGGAACAGAAGTATACTCTCACATAGGTGTGTGGACAGAGTTGGATTTATGACGTGCAATTAACTCATGGACTTCAAAACTTTTTTTTTGAATTTTTTTTTTTTTTTTTGCAAATTTCTACTATGGCTCTTGGTATTTTAACCTATTCAACTTTGAACTACCCCATTAAAAAAACTACGTGATTGACCCCTTTTTCTTCATTTTTACATTTGCACACGTGATTCAATTAGGTATCTCTCAATCCTTTAAGTCTTCTCAGCATAAATGATAAGAAACCATGGATATTTGATTCAGAAGCTATAGATCATTTGTCTCGATCTTACGATAATTTTCTATCATATCTTCCGATTGTTGGTAATGAAAAGTTTCAGATTGCATATGGGTCTTGCTCCTATCGCGGACAAAAGTCATATTTCTCCCGTTGATGGTTTAACTTTACAAACTGCATGTACCCAAAAGTATCTTACAATTTCCCATCTTTTTGTTAGATAACTAGAAATGTGAATTGTCAAGTGGTCGTCTCACCAGATAATGTTTTGTTTCAACTTGAGCTTGAGGAAGACGATTGGTACAGTCTGGCACAATAGGGGACTGCTTCCTTGACGATGATGCTCCCTCTAGGAATTGTTATAGGACTAGTTTGTTTTCTTCTTATTTTTCAACTTTACAAAAGGATTGTATGTTGTGGCATTTTCGCCTTGGTCACTCAAACTTTCAATATATGAAATATTTGTTTTCTCATTTATTAATAAAGTTGACGTCTCTTCTATGTCTTGTGATGTGTGCAATAGTGCAAAACAACATAGGGTCACATTTTTGTCCCAACCTTATAAACATTCTCAACCCTTCACCCTTATTCACAGTGATGTTTGGGGTCCTCAAGTATTCCTACCCCTTCAAGGAAACATTGGTTTAGACCTTTATTGATGATAATATCTGTCTCACATGGGTTTTTCTCCTTACTAATAAATGTAAGGTTTCGTTGATTTTTCAACAATTTTACACTACTATTAGGACTCAGTTCAACACCAAAATTGCTATTCTTCGTAGTGATAATGGTCTTGTGTTTCTTAATAATACCCTTTGCGACTTTCTGTCTTCTAAAGACATTGTCTACCAAAGCTCATGTGTCTATACCCCTAAACATGATGGGATGGCTAAAAGGAAAAATTGTCTCTTTGAGGTTGCCCGTTCTCTCATGCTGTCTACTTTGCTTCCATCATACTTATGGGGAGATGCAATTCTCACTGCAGCTCATCTTATTAATCAAATGTCTTCCCGTGTCCTTCAACTTCAAACCCCTCTTGAATGCCTCAAGGACTCATACCCTACCATGCAGTTTATTCCTAATGCCCCTCTTAGGGTTTTTGGTTGCACTGCCTTTGTCCATAGTCATGGCCCTAACCAAACTAAGTTTACCCCTCGTGCTCAGAAATGTGTCTTCGTTGGGTATCCTCTTCACCAATGAGGTTATAAATGCTTCCACTCTACTTCTCGATAATACTTCATCTCCATGGATGCAATATCTCTTGAGGATCAACCTTTTGTCCTCGTTAGTCATCTTCAAGGGAAAGTACTAGTGAAGAGACTAACCGATCCACATCTTTAGTCCCTACTAACCTTCCTGAACCCATTCCGAGTGCCCACGACTGATATGTTACTACCAGCTCTAAGAATACTAACTTGAGTGTTGAGGATGATATTGTTGATTAAGTTGAGAATGACAAGACCGATATGTTAGTTGTAGAGAGTAACCAGGTTGCAAGCAATGATGAGACTTCGATAGAAACACAAGAGGGTGAGACTCTTCCTTGGGTTGGAAAATGTAATCAAAATCCCGTTATAGTTGAGGAATCTGATAAATTGACATGCCCATTGCATTGAGAAAGGGCACCGGATTCGCACTAAGTGCCTCATATACAACTTTTTGTCTTATAGTAATATGTCTTCTGAGTTTAGGGCGTTCATTGCCAGCCTTGATACAACAACAATACCGAAAAACATACATATGGCTATGGAAATTTCAAAGTGGAAGACAACTGTCATGGAAGAAATGAGGGCTGTTGAAAAGAATAATACGTGGAACCTTTGCCCTTTTCCTAAAGGGCATAAAACATTTGGGTGCAAGTGAGTGTTCACTCTAAAATGTAAATAGGATGGAACTCTAGACTGGTGGAAGGCTAAACTTGTAGCAAAAGGGTTCACTCAAACTTATGAGATAGATTATTCTGAAACTCTCCCCTGAAGCAAAGTTAAACATGGACCAGATCCTCCTTTCTATTGTAGTTAATAAAGACTAACCTCTCCATCAACTTGATATAAAAAATGCACTTCTTAATGATGAATTAAGAAGAAGTTTATATGAGCTCCTAGGTTTTGAAGCTCAATTTGATCATCAGATATGTAAATTCAAGAAGTCTTTGTATGGTTTGAAATAGTCCTCAAGAGTGTGGTTCGACATGTTTACTACATTATAAGTCCCAAGGGTTCATTGAAGAACACTCTAATCACATGTTGTTTTCAAGAAGGTCAGTATTTGGGAAAATTGTTGTTCTAATTGTGTATGTAGATGATATTGTCTTGTTAGGAGATGATACGACTGAGATCATCAGGCTGAAAAAGAAAATGGCTGACGAGTTTGAGATCAAAGATCTAGGGAATGTAAAGTATTACCTTGGAATGTAGATGGCAAGATCAAGGGAAAGGATCTTTGTCTCACAACGAAAATTCACTCTTGACCTGTTAAAAGAAACAGGTATGACTGGATGTAGACCTACTGACCCTCCTATTGAATTCAATGTGAAATTGAGAGATTTTGTTGACAAAGTTCTTGTTGATAAAGTGGTATCAGTGTCTATTGGGTAAGCTGATTTACTTATTTTACACCAGCCAAGATATTTCCTATGTTGTTAGTGTTGTTTGTTAGATACGAAGAGCATATGGAAGCTGTTAATTGGATTTTGAGATATTTGAAAAGCTCTCCGCGTAAAGGTTTGATATTTAGGAAAGCTAACAGGAAATGAATCGAGGTTTATACCAACTCTAATTGGGCAGGATCAGTTATTGATAGAAAATCTATCTTTGGGTATTGTTGCTAGAATTAGTGCTGAAGTTGAATACAGTGCTATAAGATTGGAAAATGTGAAGAAATCTGGTTGAAGAAAGTTTTGTTTGATCTTCACAACATGTGGAGGTTGACACACTTTGTAAAAGAGAAGCTAGATAATGGCAGGATCAGTATTACTTATATTCCATCTTGTCAACAAGTTGTTAATCTTCTCACCAAAGGGTTATTCAGGCCAAGCTTTGAGTCGTGTGTTAGCAAGTTGGATCTCATTAATGTCTACCCCACAACTTGAGGAAGAGTGTTGGAAATAAGAGGCTTTGTTGATAGTTTATTGCCTCGAGGGTATTTTAGTATTTTACTTCACATTATGTTTATTTCTTTTTTTGTTTTAGGGCTTGCTAAAGCCTCTAAAGTTGTATTCTTTTGTAACTTTCAGTATGTGAAGATGATAAAAAGTGACTCTCTGTCGTGGATTTTTCTCCTTGTTCTTGGGTTTTCCATGTAAAGCGGATTTGGCTAGCTTTTCAACTTTCATTGATTCAATTGTTGGATCATTCAACCATGACAAAGAAAACTCTTATTTTGGTCTCAAATTCGTTTGATCATTGATGTTCATCTTCTTGAACAAGAAAAATTGTCTATCACACAATTTAACGGGTGATTCAAACGAAAAATTGACAAAGAGTCTACATTTCAACACTTGAAAGTCCAAGGTTAAAATTGATACAACTTACTAAGTTTGTGGTAAAATTATTTTTTCTCCTAAATTTTATATATCTAGGGCATCCAAAACTGCTTGCAGACCGCTTGTGTGCAGCTCAAGTATTCTTACGATGCCACCGTCTAACTCTTCTATATTTGGTTGTCAAGGAAAATATGAACTTGAACCCATTCTTCTGGCCCTTTATCCTTTTACTGCTTTTATTGACCTCTAGGTCAACTCTAGGTCAACCCATGGTGATTGACTTCAACTTTTTCCTATGTCTAATGTACACCTCGATGGCTTTGTGGCTTATCTCCCCTGTGGCTTTGTCTGTTGACATTAAAATTTCATCTGTTCTTCCTTAGCCTTGAAACATGAAATCGAAATGAGTAGTGTTTAAATTCTAGTGTGATGAGAAGTTGTCTTTTCTCATTTTGTCCGGGAAAGTAACTGATATGGAGATGTTTACTAGAATTTTTATGCCGCCTGCTATTTTGTCCATGGGGAAATTGAGAACCTCTAAATAAAAGAGCAAATTAAAAGAATATTTTAGTGGATGTGGTCAAGATGCTTTATTGTTTATTTTATTAATGGCACAGTTTTGCCTGCGCTCGTAAGATTCTTGTAGGACATTTCCCGTCCCATTAAGTTAATGATTTGCAATGTTTTTAGGAAATTGTTAAGCCTTTTAATGAAATTATGATCTTATTTTATCACATACTGGATATATAGTATAAGTTCAGTCCCCAATGGGTTTGGTTTTATTTCAAGCAAATGCTATTTATCCCTTTTAATGTATACCTTTTCTTTAGTATGATGAGTCAAGATCTGAAGAGTTGATAGAGCGCAAAATAAAGAATGCTCCACCAGGTCAAGGAACTGTGAGGATGCTTAGTCGTCAGGAGTGGGAGGAAATTCGAGAAGTTCGACCAAGGACTCCGTTCGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACATGGTAAGGCTGTTGTATCATTGGTCTCATTTGGAAATTGATGTGAAAGCCTCCACATTTCTCATCTTTTATCCAATTCCTTTGTGATGGTAATGTGCTTCCCTGTTTCCATCCTTATTTCTGAGTTGTGATGGTATGTCGGTATGTGGCTTGGGGGCAGATTGAAAATGGAGTGATTATATATATATATATATATATATATATATTTTAGCAATACAACTTTAGTTGAGAAAGAATGGAAGAATACAAGGGCATACAAAAAAACAAGCACACCAAAATTCCCCTACTAAAAGAAGGGGTTCCAACTAAGTAAAACGGAGTGATAATTTATTAAAAGTAGTTGCTTTGACAATCGTTTCATGCAGGAAGATTTGAAGGACTGGACAGTTGATGTGCTGTCGAATGCACTTACTCGGGCTGAAGAGAGTGTTAGGCATGGTTCCACTTCCAAGTGA

mRNA sequence

ATGACGGGATTTGGGCATGGACTGCGTGTAATTGGGAGACAGATGCATCTCCTTCATCAACGTGAAGGTCCATCAGAGGTTCTAAAGGGAAAGATCGCAGAGCTGGAGAAATTTAGGAAGATGAAGAGAAGTACGAAGAAGGATCAGTTCACTGTGGACGTTCCTGAATCAAATTCCTTCCTTGATACTCCTTCTATGCCCATGATCCTCACTGCTGTTGGAATTGCTCTCTTCGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGTTGATAGAGCGCAAAATAAAGAATGCTCCACCAGGTCAAGGAACTGTGAGGATGCTTAGTCGTCAGGAGTGGGAGGAAATTCGAGAAGTTCGACCAAGGACTCCGTTCGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACATGGAAGATTTGAAGGACTGGACAGTTGATGTGCTGTCGAATGCACTTACTCGGGCTGAAGAGAGTGTTAGGCATGGTTCCACTTCCAAGTGA

Coding sequence (CDS)

ATGACGGGATTTGGGCATGGACTGCGTGTAATTGGGAGACAGATGCATCTCCTTCATCAACGTGAAGGTCCATCAGAGGTTCTAAAGGGAAAGATCGCAGAGCTGGAGAAATTTAGGAAGATGAAGAGAAGTACGAAGAAGGATCAGTTCACTGTGGACGTTCCTGAATCAAATTCCTTCCTTGATACTCCTTCTATGCCCATGATCCTCACTGCTGTTGGAATTGCTCTCTTCGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGTTGATAGAGCGCAAAATAAAGAATGCTCCACCAGGTCAAGGAACTGTGAGGATGCTTAGTCGTCAGGAGTGGGAGGAAATTCGAGAAGTTCGACCAAGGACTCCGTTCGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACATGGAAGATTTGAAGGACTGGACAGTTGATGTGCTGTCGAATGCACTTACTCGGGCTGAAGAGAGTGTTAGGCATGGTTCCACTTCCAAGTGA

Protein sequence

MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSFLDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIREVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK
Homology
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BLAST of CsaV3_1G000130 vs. NCBI nr
Match: XP_004138022.1 (PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus] >KGN63439.1 hypothetical protein Csa_1G000630 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 1.6e-92
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF
Sbjct: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR
Sbjct: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 177
           EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 176

[Close]
BLAST of CsaV3_1G000130 vs. NCBI nr
Match: XP_008464374.1 (PREDICTED: uncharacterized protein LOC103502279 isoform X1 [Cucumis melo])

HSP 1 Score: 332.0 bits (850), Expect = 1.2e-87
Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           MTGFGHGLRVIGRQ+HLL QREGPSEVL+GKIAELEKFRK K+S KKDQF VDVPESNSF
Sbjct: 1   MTGFGHGLRVIGRQVHLLQQREGPSEVLRGKIAELEKFRKRKKSMKKDQFIVDVPESNSF 60

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSR+EWEEIR
Sbjct: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSREEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 177
           EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDV+SNALTRAEESVRHGSTSK
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVVSNALTRAEESVRHGSTSK 176

[Close]
BLAST of CsaV3_1G000130 vs. NCBI nr
Match: XP_022134988.1 (uncharacterized protein LOC111007103 [Momordica charantia] >XP_022134990.1 uncharacterized protein LOC111007103 [Momordica charantia] >XP_022134991.1 uncharacterized protein LOC111007103 [Momordica charantia] >XP_022134992.1 uncharacterized protein LOC111007103 [Momordica charantia] >XP_022134993.1 uncharacterized protein LOC111007103 [Momordica charantia] >XP_022134994.1 uncharacterized protein LOC111007103 [Momordica charantia] >XP_022134995.1 uncharacterized protein LOC111007103 [Momordica charantia])

HSP 1 Score: 307.0 bits (785), Expect = 4.2e-80
Identity = 153/176 (86.93%), Postives = 166/176 (94.32%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           MTGFGHGLRV+ RQMHL HQRE PSE+LKG+IAELE+ RK +++ KKDQF VDVPES SF
Sbjct: 1   MTGFGHGLRVLRRQMHLPHQRECPSEILKGQIAELERRRKGRKNPKKDQFIVDVPESKSF 60

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDT SMPMILTAVG+ALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSR+EWEEIR
Sbjct: 61  LDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSREEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 177
           +VRPRTPFESKLARPNARIRTGEPLHMEDLKDWT+DVL++AL RAEESVRHGSTSK
Sbjct: 121 DVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTIDVLTDALARAEESVRHGSTSK 176

[Close]
BLAST of CsaV3_1G000130 vs. NCBI nr
Match: XP_022921622.1 (uncharacterized protein LOC111429829 isoform X2 [Cucurbita moschata] >XP_022921624.1 uncharacterized protein LOC111429829 isoform X2 [Cucurbita moschata])

HSP 1 Score: 297.4 bits (760), Expect = 3.3e-77
Identity = 153/176 (86.93%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           MTGFG+GLRV+ RQMHLL QRE PSE LK KIAELE+FRK K+S K  QF VDVPES SF
Sbjct: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSVK--QFIVDVPESKSF 60

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDT SMPMILTAVG+ALFAKLLMMYDESRSEELIERKIKN+PPGQGTVRMLSR+EWEE+R
Sbjct: 61  LDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 177
           EVRPRTPFESKLARPNARIRTGEP+H EDLKDWTVDVLSNALTRAEESVRH STSK
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDSTSK 174

[Close]
BLAST of CsaV3_1G000130 vs. NCBI nr
Match: XP_022921621.1 (uncharacterized protein LOC111429829 isoform X1 [Cucurbita moschata])

HSP 1 Score: 297.4 bits (760), Expect = 3.3e-77
Identity = 153/176 (86.93%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           MTGFG+GLRV+ RQMHLL QRE PSE LK KIAELE+FRK K+S K  QF VDVPES SF
Sbjct: 68  MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSVK--QFIVDVPESKSF 127

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDT SMPMILTAVG+ALFAKLLMMYDESRSEELIERKIKN+PPGQGTVRMLSR+EWEE+R
Sbjct: 128 LDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMR 187

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 177
           EVRPRTPFESKLARPNARIRTGEP+H EDLKDWTVDVLSNALTRAEESVRH STSK
Sbjct: 188 EVRPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESVRHDSTSK 241

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BLAST of CsaV3_1G000130 vs. TAIR10
Match: AT2G04340.1 (unknown protein)

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-55
Identity = 104/153 (67.97%), Postives = 131/153 (85.62%), Query Frame = 0 

Query: 22  EGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSFLDTPSMPMILTAVGIALFAKL 81
           + P+E L+ KIA+L+K +K +R+  K+QF V+VPES S+LDT +MPM L  VGIALFAK+
Sbjct: 22  DAPTETLRKKIADLQKSKK-RRNPIKNQFLVEVPESRSYLDTATMPMFLAVVGIALFAKV 81

Query: 82  LMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIREVRPRTPFESKLARPNARIRT 141
           LMM D+S+S+E+IERKIKNAP GQGTVRM+ R+EW+E REVRPRTPFESKLARPNA+IRT
Sbjct: 82  LMMIDDSKSQEMIERKIKNAPQGQGTVRMIDREEWDEFREVRPRTPFESKLARPNAQIRT 141

Query: 142 GEPLHMEDLKDWTVDVLSNALTRAEESVRHGST 175
           GEP+  +DLK+WT+DVL+NAL R EESVR GS+
Sbjct: 142 GEPVRKDDLKNWTIDVLTNALERTEESVRRGSS 173

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BLAST of CsaV3_1G000130 vs. TrEMBL
Match: tr|A0A0A0LR33|A0A0A0LR33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000630 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-92
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF
Sbjct: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR
Sbjct: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 177
           EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 176

[Close]
BLAST of CsaV3_1G000130 vs. TrEMBL
Match: tr|A0A1S3CLB1|A0A1S3CLB1_CUCME (uncharacterized protein LOC103502279 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502279 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 8.0e-88
Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           MTGFGHGLRVIGRQ+HLL QREGPSEVL+GKIAELEKFRK K+S KKDQF VDVPESNSF
Sbjct: 1   MTGFGHGLRVIGRQVHLLQQREGPSEVLRGKIAELEKFRKRKKSMKKDQFIVDVPESNSF 60

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSR+EWEEIR
Sbjct: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSREEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 177
           EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDV+SNALTRAEESVRHGSTSK
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVVSNALTRAEESVRHGSTSK 176

[Close]
BLAST of CsaV3_1G000130 vs. TrEMBL
Match: tr|A0A2I4E529|A0A2I4E529_9ROSI (uncharacterized protein LOC108986362 OS=Juglans regia OX=51240 GN=LOC108986362 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.6e-62
Identity = 124/163 (76.07%), Postives = 141/163 (86.50%), Query Frame = 0 

Query: 11  IGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSFLDTPSMPMIL 70
           I RQ+H L   E PS+ LK KIAEL+K RKM+RS KKDQF V+VPES ++LDT +MPMI+
Sbjct: 13  IRRQLHTL-SHESPSQTLKSKIAELQKMRKMRRSPKKDQFLVEVPESRAYLDTATMPMIV 72

Query: 71  TAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIREVRPRTPFES 130
             VGIA FAKLLMMYD+SRS+ELIERKI+NAP GQGTVRMLSR+EWEEIREVRPRTPFES
Sbjct: 73  AGVGIAFFAKLLMMYDDSRSQELIERKIRNAPAGQGTVRMLSREEWEEIREVRPRTPFES 132

Query: 131 KLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGS 174
           KLARPNARIRTGEPL MEDLKDWT+DVL++A TR EE+VR  S
Sbjct: 133 KLARPNARIRTGEPLRMEDLKDWTIDVLTDAFTRVEETVRQNS 174

[Close]
BLAST of CsaV3_1G000130 vs. TrEMBL
Match: tr|A0A2C9UQE3|A0A2C9UQE3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G060500 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 7.1e-60
Identity = 123/173 (71.10%), Postives = 143/173 (82.66%), Query Frame = 0 

Query: 1   MTGFGHGLRVIGRQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSF 60
           M G    L +  R +H L  R+GPSE LK +IAELEK +  K++ KKD   V+VPES SF
Sbjct: 1   MYGARETLFLCRRGLHRL-SRDGPSETLKRRIAELEKMKMKKKNHKKDDVFVEVPESKSF 60

Query: 61  LDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIR 120
           LDT +MPMILT VG AL AKLLMMYD+S+S+E+IERKIKNAPPGQGTVRMLSR+EWEEIR
Sbjct: 61  LDTATMPMILTVVGTALLAKLLMMYDDSKSQEMIERKIKNAPPGQGTVRMLSREEWEEIR 120

Query: 121 EVRPRTPFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGS 174
           EVRPRTPFESKLARPNARIRTGEPL M+DLKDWT+DVL++A+TR EESV+  S
Sbjct: 121 EVRPRTPFESKLARPNARIRTGEPLRMQDLKDWTIDVLTDAVTRVEESVKSNS 172

[Close]
BLAST of CsaV3_1G000130 vs. TrEMBL
Match: tr|A0A061F9Y0|A0A061F9Y0_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032134 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.1e-58
Identity = 116/155 (74.84%), Postives = 137/155 (88.39%), Query Frame = 0 

Query: 13  RQMHLLHQREGPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSFLDTPSMPMILTA 72
           R +H L  R GPSE LK K+AE+EK +K +R+ KKDQ  V+VPES SFLDT ++PM+L  
Sbjct: 83  RWLHTL-SRAGPSETLKRKVAEMEKMKK-RRNLKKDQLFVEVPESRSFLDTATLPMVLAV 142

Query: 73  VGIALFAKLLMMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIREVRPRTPFESKL 132
            GIALFAKLLMM+DES+S+ELIERKIKNAPPGQGTVRMLSR+EWEE REVRPRTPFESKL
Sbjct: 143 AGIALFAKLLMMHDESKSQELIERKIKNAPPGQGTVRMLSREEWEEFREVRPRTPFESKL 202

Query: 133 ARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEE 168
           ARPNA++RTGEPLHMEDLK+WT+DVL++ALTRAE+
Sbjct: 203 ARPNAKVRTGEPLHMEDLKNWTIDVLTDALTRAED 235

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138022.11.6e-92100.00PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus] >KGN63439.1 hy... [more]
XP_008464374.11.2e-8794.89PREDICTED: uncharacterized protein LOC103502279 isoform X1 [Cucumis melo][more]
XP_022134988.14.2e-8086.93uncharacterized protein LOC111007103 [Momordica charantia] >XP_022134990.1 uncha... [more]
XP_022921622.13.3e-7786.93uncharacterized protein LOC111429829 isoform X2 [Cucurbita moschata] >XP_0229216... [more]
XP_022921621.13.3e-7786.93uncharacterized protein LOC111429829 isoform X1 [Cucurbita moschata][more]
BLAST of CsaV3_1G000130 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04340.11.9e-5567.97unknown protein[more]
BLAST of CsaV3_1G000130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G000130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LR33|A0A0A0LR33_CUCSA1.1e-92100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000630 PE=4 SV=1[more]
tr|A0A1S3CLB1|A0A1S3CLB1_CUCME8.0e-8894.89uncharacterized protein LOC103502279 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2I4E529|A0A2I4E529_9ROSI2.6e-6276.07uncharacterized protein LOC108986362 OS=Juglans regia OX=51240 GN=LOC108986362 P... [more]
tr|A0A2C9UQE3|A0A2C9UQE3_MANES7.1e-6071.10Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G060500 PE=4 SV=... [more]
tr|A0A061F9Y0|A0A061F9Y0_THECC5.1e-5874.84Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032134 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005506 iron ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000130.1CsaV3_1G000130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36008FAMILY NOT NAMEDcoord: 10..172

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G000130CSPI01G00130Wild cucumber (PI 183967)cpicucB001
CsaV3_1G000130CmaCh10G000230Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G000130CmoCh10G000190Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G000130Cp4.1LG18g09420Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G000130CsGy1G000100Cucumber (Gy14) v2cgybcucB002
CsaV3_1G000130Carg10247Silver-seed gourdcarcucB0395
CsaV3_1G000130Cla019317Watermelon (97103) v1cucwmB105
CsaV3_1G000130MELO3C026167Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G000130ClCG06G018310Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G000130Lsi06G016780Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G000130MELO3C026167.2Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G000130Cla97C06G128070Watermelon (97103) v2cucwmbB076
CsaV3_1G000130Bhi02G000473Wax gourdcucwgoB087
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G000130Watermelon (97103) v2cucwmbB048
CsaV3_1G000130Wax gourdcucwgoB062
CsaV3_1G000130Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G000130Cucumber (Chinese Long) v3cuccucB017
CsaV3_1G000130Silver-seed gourdcarcucB0643
CsaV3_1G000130Cucumber (Gy14) v2cgybcucB010
CsaV3_1G000130Cucumber (Gy14) v2cgybcucB101
CsaV3_1G000130Cucumber (Gy14) v1cgycucB236
CsaV3_1G000130Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G000130Cucurbita maxima (Rimu)cmacucB0256
CsaV3_1G000130Cucurbita moschata (Rifu)cmocucB0243
CsaV3_1G000130Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G000130Cucurbita pepo (Zucchini)cpecucB0630
CsaV3_1G000130Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G000130Wild cucumber (PI 183967)cpicucB014
CsaV3_1G000130Wild cucumber (PI 183967)cpicucB126
CsaV3_1G000130Bottle gourd (USVL1VR-Ls)cuclsiB039
CsaV3_1G000130Melon (DHL92) v3.5.1cucmeB019
CsaV3_1G000130Melon (DHL92) v3.5.1cucmeB084
CsaV3_1G000130Melon (DHL92) v3.6.1cucmedB017
CsaV3_1G000130Melon (DHL92) v3.6.1cucmedB077
CsaV3_1G000130Watermelon (Charleston Gray)cucwcgB056
CsaV3_1G000130Watermelon (97103) v1cucwmB032