Cp4.1LG11g09480 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GATGAATTTAGGGTAAATTTTCAAAAAAAAATTGTGTACTCCGAAGAGTGGATCCCAACGGTCATTCTCATTGGTCATTTCCTGGATCCCTTCGGCCGAGAGGCAAAGCATCAGAGTAAAATGCAGACCACAGCCATAGCTCCTTCTTCAAATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAACCCCTTAATTCCATCCAACTCGCCATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACATCGATCGTTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAATTAGTGCTTGAATTGGCGTCTCTCTTTGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGTAATGGAGGTGGTTCGCGGTTGTGGAGGAGTTTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTGTTTAGCGTTGCATTGATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATCAAGAGTTTGAGAAGAAAAATTGAAGGTAAGAAAATTTTCTGATAGCCCTTCGATTACCTATATATTATATATAAGCAATTTTTTTCTTCTCAAATGAAATGATTGGGACTGGGTGTACCTACCCGTAATTGATAGATAGAAACCTCTGTTCTCCTTAATTTTCTTACTAGTTCTAAAAGTGATTATAAAGTTTCTCGCTATCGAGTGTGATAAAGCCAAGTTTTCAAGCAGCCAAGAACACTGCTGCTGCAACCAATGCACTCTATCTAGAGAGTCATTTGTGATTTCCTTCTCGAACAGGCAGCTAAGAGGTCTTGTTCGAGTGTTGAAAGAACGAAACTCCTACCCTTTGCAGGGTATATGTTCAACAAGTCCGGCAACCCGTCCCCTTTTTTCTATAGCACTGAAGAGCAGTAAACTATAGTGATAGAAGAACCTGGACTAGAGTTGCAAGTAAAGACCGGTAGGTCCTACTTAAGGAACCTTTTTGTTCGATTTCCATTTTCAATGCTCTCCTTCTTCGAGTGACGAAAAAAATCCAATTTTCACTTCTAGTCCATTTCTATGATCTTCAATCTTTGCCCATCTGCTTGAGAAACGAAGATAATGAAGCAGAGTTATTACAGTATTATAAGTTTCTTGGAGAAATGCAAAACCATGAAGGAGTTGAAGCAAATACACAGCCTGATGGTTACAACTTCATTCATCAAGAACATAATCCCCTGCAGCAGACTGATTGATTTTTGCGCAAATTCCGAACTGGGTGACATCGAATACGCAAGATCAGTTTTCGATGGCATTGATCAGCGCAGTGTCTACATATGGAACTCAATGATCAAAGGCTACTGCAATGGCAGTGACAAGTTTGAAGCTCTGTTTATGTATGAAGAAATGCAGCGTAAAGGCTTCTCCCCAGACCATTTCACCTTCCCTTTTGTGTTGAAAGTGTGCTCCATAATCAATCTTCTTCGATACGGGCAAGGCGTTCACAGTCGAATTGTGAAAACTGGGTTTGAATTAGATTCGTATACTTGTTCTTGTTTGCTTAATATGTATGTTTCTTGTGGAGATTTGAGTTCTGGGCTGAAGGTGTTTGAGTTTATTCCCAAGTGGAATGTGGTCGCTTGGACTTCATTAATTGCAGGGTTTGTGAATAATGATCAGGCTAGTGAAGCTTTGAGATTGTTCCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGGCCACTGCCTTGGCTGCAGCCGCTCGTTGCAGGGATATCGACGCTGGAAAA GATGAATTTAGGGTAAATTTTCAAAAAAAAATTGTGTACTCCGAAGAGTGGATCCCAACGGTCATTCTCATTGGTCATTTCCTGGATCCCTTCGGCCGAGAGGCAAAGCATCAGAGTAAAATGCAGACCACAGCCATAGCTCCTTCTTCAAATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAACCCCTTAATTCCATCCAACTCGCCATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACATCGATCGTTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAATTAGTGCTTGAATTGGCGTCTCTCTTTGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGTAATGGAGGTGGTTCGCGGTTGTGGAGGAGTTTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTGTTTAGCGTTGCATTGATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATCAAGAGTTTGAGAAGAAAAATTGAAGAAACGAAGATAATGAAGCAGAGTTATTACAGTATTATAAGTTTCTTGGAGAAATGCAAAACCATGAAGGAGTTGAAGCAAATACACAGCCTGATGGTTACAACTTCATTCATCAAGAACATAATCCCCTGCAGCAGACTGATTGATTTTTGCGCAAATTCCGAACTGGGTGACATCGAATACGCAAGATCAGTTTTCGATGGCATTGATCAGCGCAGTGTCTACATATGGAACTCAATGATCAAAGGCTACTGCAATGGCAGTGACAAGTTTGAAGCTCTGTTTATGTATGAAGAAATGCAGCGTAAAGGCTTCTCCCCAGACCATTTCACCTTCCCTTTTGTGTTGAAAGTGTGCTCCATAATCAATCTTCTTCGATACGGGCAAGGCGTTCACAGTCGAATTGTGAAAACTGGGTTTGAATTAGATTCGTATACTTGTTCTTGTTTGCTTAATATGTATGTTTCTTGTGGAGATTTGAGTTCTGGGCTGAAGGTGTTTGAGTTTATTCCCAAGTGGAATGTGGTCGCTTGGACTTCATTAATTGCAGGGTTTGTGAATAATGATCAGGCTAGTGAAGCTTTGAGATTGTTCCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGGCCACTGCCTTGGCTGCAGCCGCTCGTTGCAGGGATATCGACGCTGGAAAA GATGAATTTAGGGTAAATTTTCAAAAAAAAATTGTGTACTCCGAAGAGTGGATCCCAACGGTCATTCTCATTGGTCATTTCCTGGATCCCTTCGGCCGAGAGGCAAAGCATCAGAGTAAAATGCAGACCACAGCCATAGCTCCTTCTTCAAATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAACCCCTTAATTCCATCCAACTCGCCATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACATCGATCGTTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAATTAGTGCTTGAATTGGCGTCTCTCTTTGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGTAATGGAGGTGGTTCGCGGTTGTGGAGGAGTTTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTGTTTAGCGTTGCATTGATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATCAAGAGTTTGAGAAGAAAAATTGAAGAAACGAAGATAATGAAGCAGAGTTATTACAGTATTATAAGTTTCTTGGAGAAATGCAAAACCATGAAGGAGTTGAAGCAAATACACAGCCTGATGGTTACAACTTCATTCATCAAGAACATAATCCCCTGCAGCAGACTGATTGATTTTTGCGCAAATTCCGAACTGGGTGACATCGAATACGCAAGATCAGTTTTCGATGGCATTGATCAGCGCAGTGTCTACATATGGAACTCAATGATCAAAGGCTACTGCAATGGCAGTGACAAGTTTGAAGCTCTGTTTATGTATGAAGAAATGCAGCGTAAAGGCTTCTCCCCAGACCATTTCACCTTCCCTTTTGTGTTGAAAGTGTGCTCCATAATCAATCTTCTTCGATACGGGCAAGGCGTTCACAGTCGAATTGTGAAAACTGGGTTTGAATTAGATTCGTATACTTGTTCTTGTTTGCTTAATATGTATGTTTCTTGTGGAGATTTGAGTTCTGGGCTGAAGGTGTTTGAGTTTATTCCCAAGTGGAATGTGGTCGCTTGGACTTCATTAATTGCAGGGTTTGTGAATAATGATCAGGCTAGTGAAGCTTTGAGATTGTTCCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGGCCACTGCCTTGGCTGCAGCCGCTCGTTGCAGGGATATCGACGCTGGAAAA DEFRVNFQKKIVYSEEWIPTVILIGHFLDPFGREAKHQSKMQTTAIAPSSNPSIFFNPLLNFTISNPLIPSNSPFLSTLVAVSDGFRAQTSIVCARKKRRRPVFLRSTKLVLELASLFASNLKILPPPLDLVVAELSGGNGNGGGSRLWRSFGGGGYDGWRGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVWGFGLFGILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIEETKIMKQSYYSIISFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIINLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNNDQASEALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK
BLAST of Cp4.1LG11g09480 vs. Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2) HSP 1 Score: 261.2 bits (666), Expect = 2.3e-68 Identity = 122/228 (53.51%), Postives = 169/228 (74.12%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.1e-37 Identity = 77/219 (35.16%), Postives = 129/219 (58.90%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.4e-36 Identity = 75/222 (33.78%), Postives = 132/222 (59.46%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 5.8e-35 Identity = 81/228 (35.53%), Postives = 124/228 (54.39%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 146.4 bits (368), Expect = 8.4e-34 Identity = 74/232 (31.90%), Postives = 135/232 (58.19%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TrEMBL
Match: A0A0A0LIL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021600 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 6.3e-113 Identity = 199/226 (88.05%), Postives = 212/226 (93.81%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TrEMBL
Match: Q84KA5_CUCME (Selenium binding protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 1.3e-110 Identity = 196/226 (86.73%), Postives = 207/226 (91.59%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TrEMBL
Match: Q84KA4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 5.2e-91 Identity = 173/224 (77.23%), Postives = 193/224 (86.16%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TrEMBL
Match: A0A0A0LFR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021610 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 2.4e-88 Identity = 170/224 (75.89%), Postives = 188/224 (83.93%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TrEMBL
Match: M5WKD0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026555mg PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.7e-78 Identity = 140/226 (61.95%), Postives = 177/226 (78.32%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TAIR10
Match: AT3G05240.1 (AT3G05240.1 mitochondrial editing factor 19) HSP 1 Score: 261.2 bits (666), Expect = 1.3e-69 Identity = 122/228 (53.51%), Postives = 169/228 (74.12%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-38 Identity = 77/219 (35.16%), Postives = 129/219 (58.90%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TAIR10
Match: AT2G22410.1 (AT2G22410.1 SLOW GROWTH 1) HSP 1 Score: 154.8 bits (390), Expect = 1.3e-37 Identity = 75/222 (33.78%), Postives = 132/222 (59.46%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TAIR10
Match: AT2G33680.1 (AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 150.2 bits (378), Expect = 3.3e-36 Identity = 81/228 (35.53%), Postives = 124/228 (54.39%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. TAIR10
Match: AT2G02980.1 (AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 146.4 bits (368), Expect = 4.7e-35 Identity = 74/232 (31.90%), Postives = 135/232 (58.19%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. NCBI nr
Match: gi|449443185|ref|XP_004139361.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g05240 [Cucumis sativus]) HSP 1 Score: 416.0 bits (1068), Expect = 9.1e-113 Identity = 199/226 (88.05%), Postives = 212/226 (93.81%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. NCBI nr
Match: gi|659070392|ref|XP_008454853.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g05240 [Cucumis melo]) HSP 1 Score: 408.3 bits (1048), Expect = 1.9e-110 Identity = 196/226 (86.73%), Postives = 207/226 (91.59%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. NCBI nr
Match: gi|659070394|ref|XP_008454859.1| (PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo]) HSP 1 Score: 346.3 bits (887), Expect = 8.9e-92 Identity = 174/224 (77.68%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. NCBI nr
Match: gi|28558787|gb|AAO45758.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 343.2 bits (879), Expect = 7.5e-91 Identity = 173/224 (77.23%), Postives = 193/224 (86.16%), Query Frame = 1
BLAST of Cp4.1LG11g09480 vs. NCBI nr
Match: gi|449443183|ref|XP_004139360.1| (PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus]) HSP 1 Score: 334.3 bits (856), Expect = 3.5e-88 Identity = 170/224 (75.89%), Postives = 188/224 (83.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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