Cp4.1LG08g06480 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTCGACAAGACGTCCTGGACCCCAACTGAGTTGTTCCGGTAAGATTCCCACGCGCGTAAGCGTCCTCTTCACGCCCACACATTAATTAATTATTTATTTATTAAAAAGAAAAAAAAAGGTTGTTAATTTCCATCTCCCATTTTCTTTCTTTCCTTCTGGTTCCTTCATTTGTTGTTCATGTTCTTAAGCTTTGGTGGGTTAGTAATGAGTACACCTCCAAATATGGCAACAATCACAGCCGCCTTAGAACGCTCTCTTCAAAACTGTTCCTTAAGCCGCCACCGCCGCCGCCATCATGATCATCATCACCAACAACAACAAGCCCCAAATTCCTCTTCTTCTGATCTTCTTCAACCTCCCACCACTTTGGACCTCAACTCCCATATCTCTCTCCCTTGCCACTGGGAGCAGTGTCTCGACTTAAAGGTTATCTTTTTTGGGTTCAGTTGATTATTATTGGGAGAGAGTCTCAGATGAGCTAATTTAGGAATGATCATGAGTTTCTCCTTTTGGAAAGCCCAAAGCTCTTCTGGGAGGGAGTAGTTAATTCAGGGAATGATCATGAGTTTATAAGTAAGGAATACATATTCATTGATATGAGGCGTTATTCCTACAAAAACTTATTAGGGTTTCGTGTTTGGGTATAGAATTCATGGAAAGGAAGGAACTTTAAGGGGGTTTTTTGAAATTTTGTTTAATGGGTTTTGTTTAAATGTGAAGGGTTGCTTATAATTTGAAGAGAATATGGAGAATGTGAGGTTTTTTGTTTGTTTTTTTTTTGGCAGACGGGGGAGATTTACTACATAAACTGGAGGAATGGAATGAAGGCGAAGGAAGATCCAAGGTCTATCACAGAAGATCATTATAGTGAAGATTACTATTACTCGGATGACGATGACGATGATGATAGTGACGAGTCGTCGACAGAGTCATCGAATAACAACAATGAGAACAACAAGAACTATGCAGCCATGGAAGAACAGGAAGAAGAAGAGGAGGAGGAGGAGGATGTGTTGGTGGTGGCAGGTTGCAAGAGCTGCCTAATGTATTTTATGGTGCCAAAGCTTGTTGAAGATTGTCCAAAATGCAGTAATGGTCAGCTTCTTCATTTTGATCGCTCTGAAAATGAGATTCCATGAATGACACAACTTTCCACTTGCTTTTCTTTCTGGGTTTTCCTTTCTTTGGCTTTGATTCATGGGGGAATGAGAGGAAAAAGAAGAGAGAGAAAAACCCTTTTCATTTTTGCCTTTCAAATTGTTTCCATGTGTATTTGTATTTGTCAGAAAAGGAGGCCAATGGGTTTTGGTTTTGGTTTTAGTTTTGGCTTTTGTTTTATAAATTTCTTCATTTTTTGTTCTTCTTTTTCAACTCTAATCATGTGAATGGGTGTTGAATTGCAAACAAACCTTAGTTTAATGGAAATAGAATTTCAAGAAAAGAATCAAACCCTAAACAAGTAATAATATATTCTAACAACACTCTTATTTTTCAAGTTTTGTATTCATTTAAGGTAGTTTCGTTTGTTCTCGGGTACAAACTTTCATGAGGTTTTTTAGTTCAAACATGCTAAGGTTGAGAATGGAATTCTTAATCATTTGGTTGAGATTTTAATAGTTTAACGAGATGAGTTATAGCGATAGGGTACAAACTTTCACAAGATTTTTTAGTTCAAACATACTAAGGTTGAGAATGGAATTCTTAATCATTTGGTTGAGATTATAATATTTTAACGAGACAATTTATAGCTGCATGCATGCAACCTATATTCATTTTGGATTCCAAACTTTTGAGTTTATTTCCTTCTAACAAATAGATAATACCAACTCTGAGTATGCATGA ATGATGACGGGGGAGATTTACTACATAAACTGGAGGAATGGAATGAAGGCGAAGGAAGATCCAAGGTCTATCACAGAAGATCATTATAGTGAAGATTACTATTACTCGGATGACGATGACGATGATGATAGTGACGAGTCGTCGACAGAGTCATCGAATAACAACAATGAGAACAACAAGAACTATGCAGCCATGGAAGAACAGGAAGAAGAAGAGGAGGAGGAGGAGGATGTGTTGGTGGTGGCAGGTTGCAAGAGCTGCCTAATGTATTTTATGGTGCCAAAGCTTGTTGAAGATTGTCCAAAATGCAGTAATGATAATACCAACTCTGAGTATGCATGA ATGATGACGGGGGAGATTTACTACATAAACTGGAGGAATGGAATGAAGGCGAAGGAAGATCCAAGGTCTATCACAGAAGATCATTATAGTGAAGATTACTATTACTCGGATGACGATGACGATGATGATAGTGACGAGTCGTCGACAGAGTCATCGAATAACAACAATGAGAACAACAAGAACTATGCAGCCATGGAAGAACAGGAAGAAGAAGAGGAGGAGGAGGAGGATGTGTTGGTGGTGGCAGGTTGCAAGAGCTGCCTAATGTATTTTATGGTGCCAAAGCTTGTTGAAGATTGTCCAAAATGCAGTAATGATAATACCAACTCTGAGTATGCATGA MMTGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYSDDDDDDDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNDNTNSEYA
BLAST of Cp4.1LG08g06480 vs. TrEMBL
Match: A0A0A0KTY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G009890 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.7e-22 Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. TrEMBL
Match: Q5HZ54_ARATH (At2g33510 OS=Arabidopsis thaliana GN=At2g33510 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.9e-22 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. TrEMBL
Match: O22801_ARATH (Putative uncharacterized protein At2g33510 OS=Arabidopsis thaliana GN=At2g33510 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.9e-22 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. TrEMBL
Match: F4IFU5_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At2g33510 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.7e-22 Identity = 68/107 (63.55%), Postives = 82/107 (76.64%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. TrEMBL
Match: V4MA02_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017284mg PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.9e-21 Identity = 66/109 (60.55%), Postives = 83/109 (76.15%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein) HSP 1 Score: 111.3 bits (277), Expect = 3.9e-25 Identity = 68/107 (63.55%), Postives = 82/107 (76.64%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 3.7e-15 Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. NCBI nr
Match: gi|470149188|ref|XP_004310123.1| (PREDICTED: uncharacterized protein LOC101297903 [Fragaria vesca subsp. vesca]) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. NCBI nr
Match: gi|778689802|ref|XP_004152315.2| (PREDICTED: uncharacterized protein LOC101222996, partial [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.8e-22 Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. NCBI nr
Match: gi|700197830|gb|KGN52988.1| (hypothetical protein Csa_4G009890 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.8e-22 Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. NCBI nr
Match: gi|2459433|gb|AAB80668.1| (hypothetical protein [Arabidopsis thaliana]) HSP 1 Score: 111.7 bits (278), Expect = 8.5e-22 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 1
BLAST of Cp4.1LG08g06480 vs. NCBI nr
Match: gi|30685734|ref|NP_180909.2| (uncharacterized protein [Arabidopsis thaliana]) HSP 1 Score: 111.7 bits (278), Expect = 8.5e-22 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|