Cp4.1LG05g05230 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGGGTAAAAATGTAAAATAAAATAAAAGTATAAATATTTTTGGTCACTAAAAAATGGTTATAAAACATTAAGATGAAATAATAAAAAGGAATTTTAAAATTTAAACCTATTTATTTATTATCTCCGACGAAGAAGAAATTTTGGAATCGGCCATTGAACTGCAAATTTCTGATCGGAGCACCTTTCGAAGCTTCAACCAGTGACGATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCGTAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGGTTCTCTCCCTTTCTCCCAGATTAATTCTTACTACTAATTCTTTCATTCTGGTTTGTTCTTGAATTTTGTTGTGTGAATGTGCACGAATTGAAGATTGTTCCTGTTTCTTTTGCCGCCTCTATTGTCTTTTGTTGTAGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATGAAAATGTTGTTGTTGTTGTTTTTTTTTTTTTCTTTAAGATTCTGTCTGTTCTTGGTTCATGCTGTGATCACGTGGTGGAATTTCGAACAATTAATGAAAATAGAAAGTCCAGTTTTTTCTACTCGAGACCGAATAGTAATTCCACTATCCAGTTGAATCAAATTTAGCTTCCAAGTCATATAATTTATTACTGTGATGGTAGAAAACCATAACGACACGCATTAGTCATCAATCAATTGATTGTGCGTAGCAGTTGTTCGACGAAATGCTTAAGTGGGAAGTAAGCTTTGAGACGACCAACCACTTTGCTTTTTGTTTGTCATCAGACGCCTGTGAGTGCTGATTTGCTCTTGTCTGTTCGGGCTGGCTGATGAGGGCAACCGCAGGAGCCATTTGGACCATTCAGAGCCGATTCCAATCTCCATAACCAGATTGGTGAACATACAGGTACGCCCACCATCTATATATATATATATATATATATCCTCCTACTTTACTTGGTATTCAAAATACAAAGTTTAGAGCGTTTGTTCTTGTAATGAAATTCATATACCTTGGAATGGAAAAAGTTGCTCATGGATGTTAGGCATGAAACTATGTAGAATGCTGGTCTAAAAGAATAATCTATGCCTAGGAAACTATGTAGCATAGGTATA ATGGGAGGGCACCTTTCGAAGCTTCAACCAGTGACGATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCGTAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATGAAAATGTTGTTGTTGTTGTTTTTTTTTTTTTCTTTAAGATTCTGTCTGTTCTTGGTTCATGCTGTGATCACGTGGTGGAATTTCGAACAATTAATGAAAATAGAAAGTCCAGTTTTTTCTACTCGAGACCGAATAGTAATTCCACTATCCAGTTGAATCAAATTTAGCTTCCAAGTCATATAATTTATTACTGTGATGGTAGAAAACCATAACGACACGCATTAGTCATCAATCAATTGATTGTGCGTAGCAGTTGTTCGACGAAATGCTTAAGTGGGAAGTAAGCTTTGAGACGACCAACCACTTTGCTTTTTGTTTGTCATCAGACGCCTGTGAGTGCTGATTTGCTCTTGTCTGTTCGGGCTGGCTGATGAGGGCAACCGCAGGAGCCATTTGGACCATTCAGAGCCGATTCCAATCTCCATAACCAGATTGGTGAACATACAGGTACGCCCACCATCTATATATATATATATATATATATCCTCCTACTTTACTTGGTATTCAAAATACAAAGTTTAGAGCGTTTGTTCTTGTAATGAAATTCATATACCTTGGAATGGAAAAAGTTGCTCATGGATGTTAGGCATGAAACTATGTAGAATGCTGGTCTAAAAGAATAATCTATGCCTAGGAAACTATGTAGCATAGGTATA ATGGGAGGGCACCTTTCGAAGCTTCAACCAGTGACGATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCGTAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATGA MGGHLSKLQPVTMRASELSTPTNPTTTVECKDRPRKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
BLAST of Cp4.1LG05g05230 vs. TrEMBL
Match: A0A0A0KWV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280670 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 6.3e-24 Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. TrEMBL
Match: W9QLE6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013727 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.0e-10 Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. TrEMBL
Match: A0A0B2Q2E8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_024994 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.2e-10 Identity = 42/66 (63.64%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. TrEMBL
Match: K7MT34_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G180600 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.2e-10 Identity = 42/66 (63.64%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. TrEMBL
Match: A0A067LAT7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19195 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.2e-10 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. TAIR10
Match: AT2G20480.1 (AT2G20480.1 unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 2.4e-11 Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. NCBI nr
Match: gi|659097733|ref|XP_008449784.1| (PREDICTED: uncharacterized protein LOC103491569 [Cucumis melo]) HSP 1 Score: 119.4 bits (298), Expect = 3.1e-24 Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. NCBI nr
Match: gi|700198932|gb|KGN54090.1| (hypothetical protein Csa_4G280670 [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 9.0e-24 Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. NCBI nr
Match: gi|720005029|ref|XP_010257524.1| (PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera]) HSP 1 Score: 74.7 bits (182), Expect = 8.7e-11 Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. NCBI nr
Match: gi|703077872|ref|XP_010090705.1| (hypothetical protein L484_013727 [Morus notabilis]) HSP 1 Score: 72.4 bits (176), Expect = 4.3e-10 Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 1
BLAST of Cp4.1LG05g05230 vs. NCBI nr
Match: gi|947050398|gb|KRG99926.1| (hypothetical protein GLYMA_18G180600 [Glycine max]) HSP 1 Score: 71.6 bits (174), Expect = 7.4e-10 Identity = 42/66 (63.64%), Postives = 45/66 (68.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |