Cp4.1LG03g00430 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTTCAGATATCTCCCAGCCCCATAGTTAGGGGTCGCCCAATAAATATGACCTTCAATCTAATTATAGGTACTCCTAAATTACCTGAAGATTCAATAATACACTGAACTTCTTTTCCTAGTTACAGGTCTTACATCTGCTTTAACAATTTCTATTCATGAGGACTAACTACCTTCCGTTTCTTCTATGGAGAATAATGAGTTCATGAGTTAGATTGAGGTTACTTCATATACTTGGGCTAAACTATCATTCAATGGTGAACATTGAACACAAATTGAGTCAATCATGTATGTTTTGTTAGCTATTTTCTAGTATAAGGAGTTGAATCTCACTAATGAGCAGCTGGATCTTTAAATGGTCATAAACTTGCGTTGGTGTTTCCATTTGGACCGATTATGAGGTTCAGCTAAAAGATGACAAATTGTTTGAAAGTTGACTTTGCTTAGCACTGTTAACCTTCAGATTCGCCATCTTTTTTATGAATAAGCAGGATTAGAGGATACTTCTCTATCACTTTTGTTTTACTTCTAATTATCAACTGCCGTCCAATCTTTATTTATCCCTTGAGAGATAATGGTGTACCACCTTCGCTTCCTCTGTAGACAATCGTGCCTTACTACTCGTATATTATCCTTTGACACTTGGTTCGAACTTCAGCTAATGACAATAACCTTGTACACATGGCACAGGTAAGCCAATCATTGCAGGAAAAATGGTCGTTGACATTGCATATTTTGGGTGGCACATGTATAGGGACAGCCACGACATTTGTGTTGAGACGTCCTGCCCTTACTCGTTTGGTGATTTTGCACTCGCTCCATTGCAAACGCCTCTGGCATTCTTTTTACCAGTAAGTTACTACTCATTTCATGTTTACCACTTGTGTTTGTATTTTTCTTGTAGTTTCTGGTTTTTATTTTCCTAAAATAAGTTAAAAGGAACAAGGTTTTATCGTGCCTCAATTGATCTAGTAAAGTCAACTGTCGTCTTCAAAGGATACGTGCTCTACCTTCCATTTTCTACTTCAGAGCTCCAACTCCCAGTTATAGAAAAAAAAAAAAGAGGCTTTCTCATCTGAAGAGGTTCATGATGACCTTATTATCCAAAGGAACTCGGATTGATCGGGACGAAAAATCTTAGATATATACACACAATCATTGATTTCTTTTTCTTTTAATTATCATGCACTCTAACTATTTCCTTTTCCTTGCAGGGTTCATATCATATGCAGATAACCGTTGTTGATGGAGATGATAACAAACTTGCATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGC ATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTTCAGATATCTCCCAGCCCCATAGTTAGGGGTCGCCCAATAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAAAAATGGTCGTTGACATTGCATATTTTGGGTGGCACATGTATAGGGACAGCCACGACATTTGTGTTGAGACGTCCTGCCCTTACTCGTTTGGTGATTTTGCACTCGCTCCATTGCAAACGCCTCTGGCATTCTTTTTACCAGGTTCATATCATATGCAGATAACCGTTGTTGATGGAGATGATAACAAACTTGCATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGC ATGGTGAAAGGAGTTCAGATATCTCCCAGCCCCATAGTTAGGGGTCGCCCAATAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAAAAATGGTCGTTGACATTGCATATTTTGGGTGGCACATGTATAGGGACAGCCACGACATTTGTGTTGAGACGTCCTGCCCTTACTCGTTTGGTGATTTTGCACTCGCTCCATTGCAAACGCCTCTGGCATTCTTTTTACCAGGTTCATATCATATGCAGATAACCGTTGTTGATGGAGATGATAACAAACTTGCATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGC MVKGVQISPSPIVRGRPINMTFNLIIGKPIIAGKMVVDIAYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPGSYHMQITVVDGDDNKLACFGFDYELVIASLFGDS
BLAST of Cp4.1LG03g00430 vs. TrEMBL
Match: A0A0A0LBM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782750 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 6.0e-54 Identity = 99/114 (86.84%), Postives = 106/114 (92.98%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. TrEMBL
Match: I3SNQ8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.4e-24 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. TrEMBL
Match: A0A072VUX7_MEDTR (MD-like lipid recognition domain protein/ML domain protein OS=Medicago truncatula GN=MTR_1g055435 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.4e-24 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. TrEMBL
Match: A5AFH3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0032g01020 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23 Identity = 48/114 (42.11%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. TrEMBL
Match: C6SXR8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G083300 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-23 Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. TAIR10
Match: AT5G06480.1 (AT5G06480.1 Immunoglobulin E-set superfamily protein) HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22 Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. TAIR10
Match: AT3G11780.2 (AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein) HSP 1 Score: 94.7 bits (234), Expect = 3.8e-20 Identity = 45/131 (34.35%), Postives = 71/131 (54.20%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. TAIR10
Match: AT3G44100.1 (AT3G44100.1 MD-2-related lipid recognition domain-containing protein) HSP 1 Score: 82.8 bits (203), Expect = 1.5e-16 Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. NCBI nr
Match: gi|659084533|ref|XP_008442939.1| (PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucumis melo]) HSP 1 Score: 219.2 bits (557), Expect = 3.8e-54 Identity = 100/114 (87.72%), Postives = 106/114 (92.98%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. NCBI nr
Match: gi|449437488|ref|XP_004136524.1| (PREDICTED: uncharacterized protein LOC101210162 [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 8.5e-54 Identity = 99/114 (86.84%), Postives = 106/114 (92.98%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. NCBI nr
Match: gi|700204095|gb|KGN59228.1| (hypothetical protein Csa_3G782750 [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 8.5e-54 Identity = 99/114 (86.84%), Postives = 106/114 (92.98%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. NCBI nr
Match: gi|922401383|ref|XP_013467828.1| (MD-like lipid recognition domain protein/ML domain protein [Medicago truncatula]) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1
BLAST of Cp4.1LG03g00430 vs. NCBI nr
Match: gi|388507668|gb|AFK41900.1| (unknown [Medicago truncatula]) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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