CmoCh06G005380 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G005380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMD-like lipid recognition domain protein/ML domain protein
LocationCmo_Chr06 : 2593968 .. 2598445 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCACGACGCAATCAAACTGCTCTTCACTGCAATATAGTTTCTACGAGATTACACAAAGTAAATTCACAGATCAAGGGATAAAGAAAATGGATAGTGTTCATAGCTGCAAGATCCTAGGTCAACGGTTTGCTTGGTTCTTCTCTCCTTGCATTATTTTTTTATAAAATTTCTGTGTATCCCATCTGCTAAACCCCGACGAAGAAGGGATTCTTCCCGCTCTCCAATGGCGTTCGTCTCATTCAGTTTCTCCCACTCTACTCCACCGAAACCCCCGTTTTTCACGCGACTCCAGAGCTTCATTATTAGAATTTCTCAAGTTTTTCCTCAAATTTGTTCTTACAGAGTTCGAATTCCATGGAGCCCTCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTAAGCTTTGTTCCACAGTTCTTCGCCACTCGAGTTCATCTCTGCGGTTTGTGGTTTTCTAATTTCAATGCTTTTACTCCATTTCTGAGATTTTTTTCTTTCCATTCTGAATCTTGGTTTTGTGGGTTAGATTAAATAGCTTGTGGCTCTGTTTTTGTGCTTATATTTCAATGTCAATCCACTTATAGTTGAGTAATATTTAATGATGTCAATCCACTTATAGTTGAGTAATATTTAATGATTGAAAGTCAATGTCAATGTACTGTTGAATATGTTTGTTTTTTTCCTCCGGGGTTTCAATCTCTTATTTTAAACATCATTTCGTTTGATCATTTCATTTTTCTATTCGTAGTTGCATTTCTGGTACTGTTAAAGGCACTGTTATATAACCCATCATTATTATAGAGCTTCATTTTGCAACACTTCTAACACCCTTCAATCTTTCACATCTCAACGACAATGATGTGCTTGAAGGGGAATAGTGTTGAATCTGAAGGTGGGCATGTATCAGCCCAAGCTCACCGCTAGCAGATATTGTCTTTTTTGGACATTACGTTTCAGACTTCCCCTCAAGGTTTTTAAAACGCGTCTTCTGTGAGAGGTTTTCACATCCTTATAAAGAATGCTTCATTCTCCTCCTCAACCGATGTGAGATCTCACAATCCACTCACATTGTAAGATCCTACATCCGTTGTAAAGGGCAACGAAGCATGCTTTATTAGGGCGTGGAAATATCTCTCTAACAGATGCGTTTTAAAAAATTTTAAAAACTCAAAAGGAAACTTGAAAGGAAAAACTCACAAAAGACAATATCTAGTAGCAAGTGGGCTTGGATGTTACAAAATATGTGTGATAATTAGATTGTAAATGAGAACTAAATAGCCTATGGAAGTTTACCTTTCTTTTTTAATAAACCAGCTCAGCAAGGTTTTAAATGTTGACGTTGGCCTGAATGTTGAGACCTGAATTTAATGGAAATGTAGATAAAATGATGAACATTTCATGAAAATTCATAAATAGCACTTGCATGGGCGTAAATTCGAACGTCTAATATCTTGATCACCGAGCTAGCTCTAGTTCATTAAGATTTAACCAATCACTACGGGGTCTAAGGAAGTTTGCGTTTTATTCTCTAACTTGAGTGAACTTTGCTCTGATGGAATGGAATTTTGTATTGATAATTTATTTTTGTTCTGCAACTAATGCAGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTACATAATACCCCACTTAGCCCTTTTCATCATCTTTATAGTTTTCTTAACATTCCATTTTTTTGACAAGTAGAAGCTGAAACTTAACTATGAATACCTCTTTTAAGGATTTGATGCAAATTTGCTCATGTTTATGTTAAACTTTTATTTAGCTGTTACTAGTTGCTCCATTGGTAAATTTAGTGGGCGCTTAACGTCAATAAAACAGGCACTGAACTGTTTTTCCTAGTAACAGGGCTGACATCTGCTACCTACTACCTTCCTTTCTTCTATGAACAATAATGAGTTCATGGGTTAGATTAACCTTTAGATTTGTCATCTTTTTTATGGATAAGCAAGATTAGAGGATACTTCTCTATCGCTTCTGTTTTACTTCTAACTAGCACCAACTGCCCTGTCTTTATTTGACCCTTGAGAGAGAAGGTATACCCCTTCCCCCTCGTGTAATTCTTGTTAGGTGTGAGATCCCACGTCTATTGGGGAGGAGAACGAATCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAGGGAAAGTCCAAAGAGAACATTATCTGCTAGCGGTGGGCTTGGGCAGTTACATTAGGCATATGTCATTCTTTGAACCTTAGCTCGAACTTTGGCTAATGACAGCAATCTTGTACACGTGGCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGTAAGTTACTCAATTCATGTTTACCACTTGTGCTTATCTTTTATTAAGTTAAAGGAACAAGGTTTTATCCTGGCTCAATTGATCTACAAAGTCTGTTCTTTTTGTCTTGAAAGGATTAAAAGCATCGCTCTACCTTATGGAAGGGTTTTCTTAGTTTCATGTGTTCTCTTAATATTAAGTATTCCACTAGAACCTAATGGGAGTTCGAGTTAGCACAAATCTAATTATTGAAAACTAGAACCTTATCTAAAGAGCTTCATGGTGACCTTACGTGAGATCCTATATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGATGTGGAAACCTCTCCATAGCATACACGTTTTAAAAACCTTGAGGGGAAGCTCGGAAGGGAAAGTTCAAAGAGGACAATATCTACTAACCGTGGGCTTGGACGGTTACAAATAGTATCAGGGCCAAGTTTTGGGCAGTGTGTTAGTGAGGACGCTGGGTTCCCAAAGGGGTGGATTATGAGATCCCACCTTGGTTGGAGATGAGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGCAGATGCATTTTAAAACCTTGAGGGGAAGCCCGAGAGGGAAAGCCCAAAGAGAACAATATCCGTTAGCGGTGGGCTTGGGTTGTTACAAACTAGGTTTTTTGGGATGAAAAACCTGAGATATACACACACAATCATTGAATTCTTTTTCCTTTAACTATTATGCATTCTAACTATTTCCTTCTCCTTGCAGGGTTCATATCATATGCAGATAACCATTATTGATGGACATGACAATAAACTAACATGTTTTGGCTTTGATTATGAACTGGTGATTGCATCACTATTCGGACATAGCTAAGAGCTTTTATTTATTGAATACTCAGCTATTGATGTTTGTACATATAAACCCTTGTAAAGCTCTGTCATCTTTAGATCCTTGTTCGTTCCTTGGGCAGACAACATTTGCACTATGACCATTTGAACAACTTATTCAGGAGAATTGAGTTGTGAAAATTGCCAAAAAAAACTCGAGTTATTAGAGAGTACCATACTACATATCGTCATTCTCACGTGGATTACTTTGGTTTTCATCGATACAAAATGGAAAGAGAAACAATTAAGTTCTAAAATAAGTTGTACTATCTGAGTAAAGGTTCAAGTTTTTTCTTTATGCTTGCTTTAATATATGATCATCATTAATGTATACATGTTTCTTCAAATAGTATATTTGAATCATTGTACTTCATATTGATGCATTATTTATATTTTTTTCATTGGGCTGAAGATTGTAGGACTCTTGTTAGATCAAGAACCACGAAAGTACGGTAGAGAATGCATCTCCATTGGTATGAGGTCTAACCAAAAGCAAAGCTATGAGAGCTTATGCTCAAAGTGGACAATATTATACCATTATGGAGAGTCGTGATTCCTAACAGAAAGTACTGTAGGATAGATGTAGCTAATTCGGTAATCCACCAAGGTTTATGAACAGCATGAGCATGCATCGTGCCTCGACAAACCACGAAGCTTGTCGAAATGGCCACGAAGGTTCCTTTCTCATATACCGAATCATGATGGGGTGGGTGGTTTAGCCTCTGCCATTGACCCTCTTCACTTTGCTGCTTTTCTCATGAGCATACACCAAATAGGTGGGGTCAGGTTCTTTCTTCTTCTTCATCATGCATCTTTTTCTTTTTTCTTGTTTCATTATTGTGTCATAACATGATTGATGGACCATTGTTGGTGATGGGTCAGAATATGAGTTACAAATAGTTGCCTCACTAAACAATGGCAAACCAAGCCCCACTCTGCTAAAGTCATTAATTTATGCACCTCTCTGAAAGCAAACTAACAAACACCTTTTTTTTTGCCTTTCTTTCAGCCTCCACTTTCTAGCTATATTGGAATCCAGAACTGA

mRNA sequence

ATGAAAGCACGACGCAATCAAACTGCTCTTCACTGCAATATAGTTTCTACGAGATTACACAAACTGCAAGATCCTAGGTCAACGGTTTGCTTGGTTCTTCTCTCCTTGCATTATTTTTTTATAAAATTTCTGTGTATCCCATCTGCTAAACCCCGACGAAGAAGGGATTCTTCCCGCTCTCCAATGGCGTTCGTCTCATTCAGTTTCTCCCACTCTACTCCACCGAAACCCCCGTTTTTCACGCGACTCCAGAGCTTCATTATTAGAATTTCTCAAAGTTCGAATTCCATGGAGCCCTCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTAAGCTTTGTTCCACAGTTCTTCGCCACTCGAGTTCATCTCTGCGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGGTTCATATCATATGCAGATAACCATTATTGATGGACATGACAATAAACTAACATGTTTTGGCTTTGATTATGAACTGCCTCCACTTTCTAGCTATATTGGAATCCAGAACTGA

Coding sequence (CDS)

ATGAAAGCACGACGCAATCAAACTGCTCTTCACTGCAATATAGTTTCTACGAGATTACACAAACTGCAAGATCCTAGGTCAACGGTTTGCTTGGTTCTTCTCTCCTTGCATTATTTTTTTATAAAATTTCTGTGTATCCCATCTGCTAAACCCCGACGAAGAAGGGATTCTTCCCGCTCTCCAATGGCGTTCGTCTCATTCAGTTTCTCCCACTCTACTCCACCGAAACCCCCGTTTTTCACGCGACTCCAGAGCTTCATTATTAGAATTTCTCAAAGTTCGAATTCCATGGAGCCCTCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTAAGCTTTGTTCCACAGTTCTTCGCCACTCGAGTTCATCTCTGCGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGGTTCATATCATATGCAGATAACCATTATTGATGGACATGACAATAAACTAACATGTTTTGGCTTTGATTATGAACTGCCTCCACTTTCTAGCTATATTGGAATCCAGAACTGA
Homology
[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A0A0LBM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782750 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.3e-60
Identity = 125/210 (59.52%), Postives = 144/210 (68.57%), Query Frame = 1 

Query: 36  LHYFFIKFLCIPSAKPRRRRDSSRSPMAFVSFSFSHSTPPKPPFFTRLQSFIIRISQSSN 95
           L   F  F+ IP A+ RRRRD S SPMA  SF           F             S  
Sbjct: 12  LFIIFWNFIIIPFARLRRRRDFSHSPMAIESFYLKKEHFHGTHF-------------SDE 71

Query: 96  SMEPSLLMKLIFSFLLWLSFVPQFFATRVHLC----DETAKYDIMVKGVEISPSPIVRGH 155
           +  P   + ++FS L +++ +  F  + +  C    DETAKYDI VKGVEISP+P+VRGH
Sbjct: 72  ADFPISSLVVLFSTLHFVALLTPFNLSHLSECYVFEDETAKYDITVKGVEISPNPVVRGH 131

Query: 156 PTNMTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLA 215
           PTNM  NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLA
Sbjct: 132 PTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLA 191

Query: 216 FFVPGSYHMQITIIDGHDNKLTCFGFDYEL 242
           FF+PGSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 192 FFLPGSYHMQITIVDGDDNKLTCFGFDYEL 208

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A072VUX7_MEDTR (MD-like lipid recognition domain protein/ML domain protein OS=Medicago truncatula GN=MTR_1g055435 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30
Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F+ Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFLLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: I3SNQ8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.5e-30
Identity = 67/156 (42.95%), Postives = 96/156 (61.54%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F  Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFFLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A067KIN7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08735 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-29
Identity = 64/140 (45.71%), Postives = 91/140 (65.00%), Query Frame = 1 

Query: 104 KLIFS-FLLWLS-FVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLII 163
           KLI S FLL L  FVP   AT V  CD+   YD+ VKGVEI+P+P+ RG     +++   
Sbjct: 5   KLIMSIFLLSLCLFVPLTQATDVKYCDKKGDYDVKVKGVEITPNPVARGQSATFSISATT 64

Query: 164 GKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQ 223
           G+ I  GK+V+D+ YFGWH++S+++D+C ETSCP T G+F +A  Q    F  PGSY + 
Sbjct: 65  GEAISGGKLVIDVAYFGWHIHSETHDLCEETSCPVTDGEFVVAHSQVLPGFTPPGSYSLT 124

Query: 224 ITIIDGHDNKLTCFGFDYEL 242
           + + DG+  +LTC  FD+ +
Sbjct: 125 MKMFDGNKRQLTCISFDFSI 144

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A0B2P9P0_GLYSO (Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Glycine soja GN=glysoja_042229 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.5e-29
Identity = 63/138 (45.65%), Postives = 90/138 (65.22%), Query Frame = 1 

Query: 104 KLIFSFLLWLSFVPQFF-ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIG 163
           K  F F   L  +  F  AT +H CD+ A YD+ VKGVEISP PI RG P   ++    G
Sbjct: 7   KFFFFFFSTLCLLYGFSNATDIHYCDKKADYDVEVKGVEISPDPIARGQPATFSIAATTG 66

Query: 164 KPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQI 223
           K +  GK+V+D+ YFGWH++S+++D+C ET+CP ++GDF +A  Q    F  PGSY +++
Sbjct: 67  KALSGGKLVIDVSYFGWHIHSETHDLCGETTCPVSAGDFVIAHSQVLPGFTPPGSYTLKM 126

Query: 224 TIIDGHDNKLTC--FGFD 239
            + DG+ ++LTC  FGFD
Sbjct: 127 KMFDGNKHELTCITFGFD 144

[Close]
BLAST of CmoCh06G005380 vs. TAIR10
Match: AT5G06480.1 (AT5G06480.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 9.9e-29
Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 1 

Query: 102 LMKLIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLII 161
           ++ L   FLL L  V    A  VH C+E A+Y++ VK V+ISP+PI  G P   T++   
Sbjct: 7   ILPLAAVFLLLL--VSPIVAIDVHYCEENAEYEVKVKEVDISPNPIAPGEPATFTISANT 66

Query: 162 GKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQ 221
           G+ I  GK+V+++ YFGWHV+S+++D+C ETSCP  +GDF +A  Q    +  PGSY ++
Sbjct: 67  GREISFGKLVIEVSYFGWHVHSETHDLCTETSCPIQTGDFLVAHSQVLPGYTPPGSYLLK 126

Query: 222 ITIIDGHDNKLTCFGFDYEL 242
           + ++D    +LTC  F +++
Sbjct: 127 MKMLDAKKKELTCIKFSFDI 144

[Close]
BLAST of CmoCh06G005380 vs. TAIR10
Match: AT3G11780.2 (AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 56/155 (36.13%), Postives = 88/155 (56.77%), Query Frame = 1 

Query: 105 LIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGKP 164
           L  S+ L +S +    AT VH CD   +Y++ V+GV+I+P PI RG P    ++      
Sbjct: 10  LAISYFLLVSTIVA--ATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTE 69

Query: 165 IIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALA-----PFQTP---------- 224
           I +GK+V+++ YFGWH++S+++D+C ETSCP   GDF +A     P  TP          
Sbjct: 70  ISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPTEKRFNLVS 129

Query: 225 ---LAFFVPGSYHMQITIIDGHDNKLTCFGFDYEL 242
                F V GSY +++ ++DG   +LTC  F +++
Sbjct: 130 IAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDI 162

[Close]
BLAST of CmoCh06G005380 vs. TAIR10
Match: AT3G44100.1 (AT3G44100.1 MD-2-related lipid recognition domain-containing protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-19
Identity = 47/132 (35.61%), Postives = 76/132 (57.58%), Query Frame = 1 

Query: 110 LLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGKPIIAGK 169
           LL + F+P   AT    CD+     + V GV+ISP P+V G      +    G+ I  GK
Sbjct: 13  LLSVFFLPALHATSFTYCDKRLD-PVKVTGVKISPDPVVSGAAATFKIFGSTGEDISGGK 72

Query: 170 MVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQITIIDGHD 229
           +V+ +LY G  V+++++D+C ET+CP   G F L+  QT  +   PG+Y +++TI D + 
Sbjct: 73  VVIRVLYVGIPVHTETHDLCDETACPVAPGSFVLSHSQTLPSITPPGTYTLKMTINDKNG 132

Query: 230 NKLTCFGFDYEL 242
            +LTC  F +++
Sbjct: 133 GRLTCISFKFKI 143

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|659084533|ref|XP_008442939.1| (PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucumis melo])

HSP 1 Score: 261.9 bits (668), Expect = 1.1e-66
Identity = 123/146 (84.25%), Postives = 131/146 (89.73%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQF-FATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 156
           MEP+  MKLIF FLLWL F PQF FATRV LCDETA+YDI VKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60

Query: 157 TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 216
           T NL+IG PIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLAFF+P
Sbjct: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 217 GSYHMQITIIDGHDNKLTCFGFDYEL 242
           GSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYEL 146

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|449437488|ref|XP_004136524.1| (PREDICTED: uncharacterized protein LOC101210162 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 9.6e-66
Identity = 121/146 (82.88%), Postives = 130/146 (89.04%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQF-FATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 156
           MEP   MKLIF FLLWL F PQF F+TR+ LCDETAKYDI VKGVEISP+P+VRGHPTNM
Sbjct: 1   MEPIFQMKLIFPFLLWLCFFPQFSFSTRLQLCDETAKYDITVKGVEISPNPVVRGHPTNM 60

Query: 157 TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 216
             NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLAFF+P
Sbjct: 61  IFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 217 GSYHMQITIIDGHDNKLTCFGFDYEL 242
           GSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYEL 146

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|700204095|gb|KGN59228.1| (hypothetical protein Csa_3G782750 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59
Identity = 125/210 (59.52%), Postives = 144/210 (68.57%), Query Frame = 1 

Query: 36  LHYFFIKFLCIPSAKPRRRRDSSRSPMAFVSFSFSHSTPPKPPFFTRLQSFIIRISQSSN 95
           L   F  F+ IP A+ RRRRD S SPMA  SF           F             S  
Sbjct: 12  LFIIFWNFIIIPFARLRRRRDFSHSPMAIESFYLKKEHFHGTHF-------------SDE 71

Query: 96  SMEPSLLMKLIFSFLLWLSFVPQFFATRVHLC----DETAKYDIMVKGVEISPSPIVRGH 155
           +  P   + ++FS L +++ +  F  + +  C    DETAKYDI VKGVEISP+P+VRGH
Sbjct: 72  ADFPISSLVVLFSTLHFVALLTPFNLSHLSECYVFEDETAKYDITVKGVEISPNPVVRGH 131

Query: 156 PTNMTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLA 215
           PTNM  NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLA
Sbjct: 132 PTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLA 191

Query: 216 FFVPGSYHMQITIIDGHDNKLTCFGFDYEL 242
           FF+PGSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 192 FFLPGSYHMQITIVDGDDNKLTCFGFDYEL 208

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|922401383|ref|XP_013467828.1| (MD-like lipid recognition domain protein/ML domain protein [Medicago truncatula])

HSP 1 Score: 140.6 bits (353), Expect = 3.8e-30
Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F+ Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFLLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|388507668|gb|AFK41900.1| (unknown [Medicago truncatula])

HSP 1 Score: 139.8 bits (351), Expect = 6.5e-30
Identity = 67/156 (42.95%), Postives = 96/156 (61.54%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F  Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFFLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

The following BLAST results are available for this feature:
BLAST of CmoCh06G005380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh06G005380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBM1_CUCSA9.3e-6059.52Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782750 PE=4 SV=1[more]
A0A072VUX7_MEDTR2.6e-3042.95MD-like lipid recognition domain protein/ML domain protein OS=Medicago truncatul... [more]
I3SNQ8_MEDTR4.5e-3042.95Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
A0A067KIN7_JATCU6.5e-2945.71Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08735 PE=4 SV=1[more]
A0A0B2P9P0_GLYSO8.5e-2945.65Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Glycine s... [more]
BLAST of CmoCh06G005380 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G06480.19.9e-2940.71 Immunoglobulin E-set superfamily protein[more]
AT3G11780.21.0e-2536.13 MD-2-related lipid recognition domain-containing protein / ML domain... [more]
AT3G44100.11.9e-1935.61 MD-2-related lipid recognition domain-containing protein[more]
BLAST of CmoCh06G005380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084533|ref|XP_008442939.1|1.1e-6684.25PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein D... [more]
gi|449437488|ref|XP_004136524.1|9.6e-6682.88PREDICTED: uncharacterized protein LOC101210162 [Cucumis sativus][more]
gi|700204095|gb|KGN59228.1|1.3e-5959.52hypothetical protein Csa_3G782750 [Cucumis sativus][more]
gi|922401383|ref|XP_013467828.1|3.8e-3042.95MD-like lipid recognition domain protein/ML domain protein [Medicago truncatula][more]
gi|388507668|gb|AFK41900.1|6.5e-3042.95unknown [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003172ML_dom
IPR014756Ig_E-set
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G005380.1CmoCh06G005380.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003172MD-2-related lipid-recognition domainPFAMPF02221E1_DerP2_DerF2coord: 123..240
score: 4.3
IPR003172MD-2-related lipid-recognition domainSMARTSM00737pgtp_13coord: 124..239
score: 6.2
IPR014756Immunoglobulin E-setunknownSSF81296E set domainscoord: 122..240
score: 9.33
NoneNo IPR availableGENE3DG3DSA:2.70.220.10coord: 123..241
score: 1.
NoneNo IPR availablePANTHERPTHR11306NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATEDcoord: 86..239
score: 2.2
NoneNo IPR availablePANTHERPTHR11306:SF13SUBFAMILY NOT NAMEDcoord: 86..239
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G005380Cucsa.242020Cucumber (Gy14) v1cgycmoB0681
CmoCh06G005380CmaCh06G005350Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G005380CmaCh14G003700Cucurbita maxima (Rimu)cmacmoB268
CmoCh06G005380Csa3G782750Cucumber (Chinese Long) v2cmocuB808
CmoCh06G005380MELO3C009555Melon (DHL92) v3.5.1cmomeB747
CmoCh06G005380ClCG10G018170Watermelon (Charleston Gray)cmowcgB729
CmoCh06G005380CSPI03G35780Wild cucumber (PI 183967)cmocpiB816
CmoCh06G005380Lsi03G018050Bottle gourd (USVL1VR-Ls)cmolsiB747
CmoCh06G005380Cp4.1LG08g09660Cucurbita pepo (Zucchini)cmocpeB797
CmoCh06G005380Cp4.1LG03g00430Cucurbita pepo (Zucchini)cmocpeB783
CmoCh06G005380MELO3C009555.2Melon (DHL92) v3.6.1cmomedB849
CmoCh06G005380CsaV3_3G038130Cucumber (Chinese Long) v3cmocucB0954
CmoCh06G005380Cla97C10G201140Watermelon (97103) v2cmowmbB818
CmoCh06G005380Bhi11G002039Wax gourdcmowgoB0974
CmoCh06G005380Carg03614Silver-seed gourdcarcmoB0351
CmoCh06G005380Carg16226Silver-seed gourdcarcmoB0933
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G005380CmoCh14G003700Cucurbita moschata (Rifu)cmocmoB222
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G005380Cucurbita pepo (Zucchini)cmocpeB774
CmoCh06G005380Bottle gourd (USVL1VR-Ls)cmolsiB737
CmoCh06G005380Cucumber (Gy14) v2cgybcmoB402
CmoCh06G005380Cucumber (Gy14) v2cgybcmoB837
CmoCh06G005380Melon (DHL92) v3.6.1cmomedB856
CmoCh06G005380Silver-seed gourdcarcmoB0562
CmoCh06G005380Silver-seed gourdcarcmoB1239
CmoCh06G005380Cucumber (Chinese Long) v3cmocucB0982
CmoCh06G005380Watermelon (97103) v2cmowmbB827
CmoCh06G005380Wax gourdcmowgoB1025
CmoCh06G005380Cucurbita moschata (Rifu)cmocmoB423
CmoCh06G005380Cucurbita maxima (Rimu)cmacmoB570
CmoCh06G005380Wild cucumber (PI 183967)cmocpiB842
CmoCh06G005380Cucumber (Chinese Long) v2cmocuB832
CmoCh06G005380Melon (DHL92) v3.5.1cmomeB754
CmoCh06G005380Watermelon (Charleston Gray)cmowcgB739
CmoCh06G005380Watermelon (97103) v1cmowmB782
CmoCh06G005380Watermelon (97103) v1cmowmB799