CmoCh06G005380 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G005380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMD-like lipid recognition domain protein/ML domain protein
LocationCmo_Chr06 : 2593968 .. 2598445 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCACGACGCAATCAAACTGCTCTTCACTGCAATATAGTTTCTACGAGATTACACAAAGTAAATTCACAGATCAAGGGATAAAGAAAATGGATAGTGTTCATAGCTGCAAGATCCTAGGTCAACGGTTTGCTTGGTTCTTCTCTCCTTGCATTATTTTTTTATAAAATTTCTGTGTATCCCATCTGCTAAACCCCGACGAAGAAGGGATTCTTCCCGCTCTCCAATGGCGTTCGTCTCATTCAGTTTCTCCCACTCTACTCCACCGAAACCCCCGTTTTTCACGCGACTCCAGAGCTTCATTATTAGAATTTCTCAAGTTTTTCCTCAAATTTGTTCTTACAGAGTTCGAATTCCATGGAGCCCTCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTAAGCTTTGTTCCACAGTTCTTCGCCACTCGAGTTCATCTCTGCGGTTTGTGGTTTTCTAATTTCAATGCTTTTACTCCATTTCTGAGATTTTTTTCTTTCCATTCTGAATCTTGGTTTTGTGGGTTAGATTAAATAGCTTGTGGCTCTGTTTTTGTGCTTATATTTCAATGTCAATCCACTTATAGTTGAGTAATATTTAATGATGTCAATCCACTTATAGTTGAGTAATATTTAATGATTGAAAGTCAATGTCAATGTACTGTTGAATATGTTTGTTTTTTTCCTCCGGGGTTTCAATCTCTTATTTTAAACATCATTTCGTTTGATCATTTCATTTTTCTATTCGTAGTTGCATTTCTGGTACTGTTAAAGGCACTGTTATATAACCCATCATTATTATAGAGCTTCATTTTGCAACACTTCTAACACCCTTCAATCTTTCACATCTCAACGACAATGATGTGCTTGAAGGGGAATAGTGTTGAATCTGAAGGTGGGCATGTATCAGCCCAAGCTCACCGCTAGCAGATATTGTCTTTTTTGGACATTACGTTTCAGACTTCCCCTCAAGGTTTTTAAAACGCGTCTTCTGTGAGAGGTTTTCACATCCTTATAAAGAATGCTTCATTCTCCTCCTCAACCGATGTGAGATCTCACAATCCACTCACATTGTAAGATCCTACATCCGTTGTAAAGGGCAACGAAGCATGCTTTATTAGGGCGTGGAAATATCTCTCTAACAGATGCGTTTTAAAAAATTTTAAAAACTCAAAAGGAAACTTGAAAGGAAAAACTCACAAAAGACAATATCTAGTAGCAAGTGGGCTTGGATGTTACAAAATATGTGTGATAATTAGATTGTAAATGAGAACTAAATAGCCTATGGAAGTTTACCTTTCTTTTTTAATAAACCAGCTCAGCAAGGTTTTAAATGTTGACGTTGGCCTGAATGTTGAGACCTGAATTTAATGGAAATGTAGATAAAATGATGAACATTTCATGAAAATTCATAAATAGCACTTGCATGGGCGTAAATTCGAACGTCTAATATCTTGATCACCGAGCTAGCTCTAGTTCATTAAGATTTAACCAATCACTACGGGGTCTAAGGAAGTTTGCGTTTTATTCTCTAACTTGAGTGAACTTTGCTCTGATGGAATGGAATTTTGTATTGATAATTTATTTTTGTTCTGCAACTAATGCAGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTACATAATACCCCACTTAGCCCTTTTCATCATCTTTATAGTTTTCTTAACATTCCATTTTTTTGACAAGTAGAAGCTGAAACTTAACTATGAATACCTCTTTTAAGGATTTGATGCAAATTTGCTCATGTTTATGTTAAACTTTTATTTAGCTGTTACTAGTTGCTCCATTGGTAAATTTAGTGGGCGCTTAACGTCAATAAAACAGGCACTGAACTGTTTTTCCTAGTAACAGGGCTGACATCTGCTACCTACTACCTTCCTTTCTTCTATGAACAATAATGAGTTCATGGGTTAGATTAACCTTTAGATTTGTCATCTTTTTTATGGATAAGCAAGATTAGAGGATACTTCTCTATCGCTTCTGTTTTACTTCTAACTAGCACCAACTGCCCTGTCTTTATTTGACCCTTGAGAGAGAAGGTATACCCCTTCCCCCTCGTGTAATTCTTGTTAGGTGTGAGATCCCACGTCTATTGGGGAGGAGAACGAATCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAGGGAAAGTCCAAAGAGAACATTATCTGCTAGCGGTGGGCTTGGGCAGTTACATTAGGCATATGTCATTCTTTGAACCTTAGCTCGAACTTTGGCTAATGACAGCAATCTTGTACACGTGGCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGTAAGTTACTCAATTCATGTTTACCACTTGTGCTTATCTTTTATTAAGTTAAAGGAACAAGGTTTTATCCTGGCTCAATTGATCTACAAAGTCTGTTCTTTTTGTCTTGAAAGGATTAAAAGCATCGCTCTACCTTATGGAAGGGTTTTCTTAGTTTCATGTGTTCTCTTAATATTAAGTATTCCACTAGAACCTAATGGGAGTTCGAGTTAGCACAAATCTAATTATTGAAAACTAGAACCTTATCTAAAGAGCTTCATGGTGACCTTACGTGAGATCCTATATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGATGTGGAAACCTCTCCATAGCATACACGTTTTAAAAACCTTGAGGGGAAGCTCGGAAGGGAAAGTTCAAAGAGGACAATATCTACTAACCGTGGGCTTGGACGGTTACAAATAGTATCAGGGCCAAGTTTTGGGCAGTGTGTTAGTGAGGACGCTGGGTTCCCAAAGGGGTGGATTATGAGATCCCACCTTGGTTGGAGATGAGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGCAGATGCATTTTAAAACCTTGAGGGGAAGCCCGAGAGGGAAAGCCCAAAGAGAACAATATCCGTTAGCGGTGGGCTTGGGTTGTTACAAACTAGGTTTTTTGGGATGAAAAACCTGAGATATACACACACAATCATTGAATTCTTTTTCCTTTAACTATTATGCATTCTAACTATTTCCTTCTCCTTGCAGGGTTCATATCATATGCAGATAACCATTATTGATGGACATGACAATAAACTAACATGTTTTGGCTTTGATTATGAACTGGTGATTGCATCACTATTCGGACATAGCTAAGAGCTTTTATTTATTGAATACTCAGCTATTGATGTTTGTACATATAAACCCTTGTAAAGCTCTGTCATCTTTAGATCCTTGTTCGTTCCTTGGGCAGACAACATTTGCACTATGACCATTTGAACAACTTATTCAGGAGAATTGAGTTGTGAAAATTGCCAAAAAAAACTCGAGTTATTAGAGAGTACCATACTACATATCGTCATTCTCACGTGGATTACTTTGGTTTTCATCGATACAAAATGGAAAGAGAAACAATTAAGTTCTAAAATAAGTTGTACTATCTGAGTAAAGGTTCAAGTTTTTTCTTTATGCTTGCTTTAATATATGATCATCATTAATGTATACATGTTTCTTCAAATAGTATATTTGAATCATTGTACTTCATATTGATGCATTATTTATATTTTTTTCATTGGGCTGAAGATTGTAGGACTCTTGTTAGATCAAGAACCACGAAAGTACGGTAGAGAATGCATCTCCATTGGTATGAGGTCTAACCAAAAGCAAAGCTATGAGAGCTTATGCTCAAAGTGGACAATATTATACCATTATGGAGAGTCGTGATTCCTAACAGAAAGTACTGTAGGATAGATGTAGCTAATTCGGTAATCCACCAAGGTTTATGAACAGCATGAGCATGCATCGTGCCTCGACAAACCACGAAGCTTGTCGAAATGGCCACGAAGGTTCCTTTCTCATATACCGAATCATGATGGGGTGGGTGGTTTAGCCTCTGCCATTGACCCTCTTCACTTTGCTGCTTTTCTCATGAGCATACACCAAATAGGTGGGGTCAGGTTCTTTCTTCTTCTTCATCATGCATCTTTTTCTTTTTTCTTGTTTCATTATTGTGTCATAACATGATTGATGGACCATTGTTGGTGATGGGTCAGAATATGAGTTACAAATAGTTGCCTCACTAAACAATGGCAAACCAAGCCCCACTCTGCTAAAGTCATTAATTTATGCACCTCTCTGAAAGCAAACTAACAAACACCTTTTTTTTTGCCTTTCTTTCAGCCTCCACTTTCTAGCTATATTGGAATCCAGAACTGA

mRNA sequence

ATGAAAGCACGACGCAATCAAACTGCTCTTCACTGCAATATAGTTTCTACGAGATTACACAAACTGCAAGATCCTAGGTCAACGGTTTGCTTGGTTCTTCTCTCCTTGCATTATTTTTTTATAAAATTTCTGTGTATCCCATCTGCTAAACCCCGACGAAGAAGGGATTCTTCCCGCTCTCCAATGGCGTTCGTCTCATTCAGTTTCTCCCACTCTACTCCACCGAAACCCCCGTTTTTCACGCGACTCCAGAGCTTCATTATTAGAATTTCTCAAAGTTCGAATTCCATGGAGCCCTCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTAAGCTTTGTTCCACAGTTCTTCGCCACTCGAGTTCATCTCTGCGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGGTTCATATCATATGCAGATAACCATTATTGATGGACATGACAATAAACTAACATGTTTTGGCTTTGATTATGAACTGCCTCCACTTTCTAGCTATATTGGAATCCAGAACTGA

Coding sequence (CDS)

ATGAAAGCACGACGCAATCAAACTGCTCTTCACTGCAATATAGTTTCTACGAGATTACACAAACTGCAAGATCCTAGGTCAACGGTTTGCTTGGTTCTTCTCTCCTTGCATTATTTTTTTATAAAATTTCTGTGTATCCCATCTGCTAAACCCCGACGAAGAAGGGATTCTTCCCGCTCTCCAATGGCGTTCGTCTCATTCAGTTTCTCCCACTCTACTCCACCGAAACCCCCGTTTTTCACGCGACTCCAGAGCTTCATTATTAGAATTTCTCAAAGTTCGAATTCCATGGAGCCCTCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTAAGCTTTGTTCCACAGTTCTTCGCCACTCGAGTTCATCTCTGCGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGGTTCATATCATATGCAGATAACCATTATTGATGGACATGACAATAAACTAACATGTTTTGGCTTTGATTATGAACTGCCTCCACTTTCTAGCTATATTGGAATCCAGAACTGA
Homology
[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A0A0LBM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782750 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.3e-60
Identity = 125/210 (59.52%), Postives = 144/210 (68.57%), Query Frame = 1 

Query: 36  LHYFFIKFLCIPSAKPRRRRDSSRSPMAFVSFSFSHSTPPKPPFFTRLQSFIIRISQSSN 95
           L   F  F+ IP A+ RRRRD S SPMA  SF           F             S  
Sbjct: 12  LFIIFWNFIIIPFARLRRRRDFSHSPMAIESFYLKKEHFHGTHF-------------SDE 71

Query: 96  SMEPSLLMKLIFSFLLWLSFVPQFFATRVHLC----DETAKYDIMVKGVEISPSPIVRGH 155
           +  P   + ++FS L +++ +  F  + +  C    DETAKYDI VKGVEISP+P+VRGH
Sbjct: 72  ADFPISSLVVLFSTLHFVALLTPFNLSHLSECYVFEDETAKYDITVKGVEISPNPVVRGH 131

Query: 156 PTNMTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLA 215
           PTNM  NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLA
Sbjct: 132 PTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLA 191

Query: 216 FFVPGSYHMQITIIDGHDNKLTCFGFDYEL 242
           FF+PGSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 192 FFLPGSYHMQITIVDGDDNKLTCFGFDYEL 208

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A072VUX7_MEDTR (MD-like lipid recognition domain protein/ML domain protein OS=Medicago truncatula GN=MTR_1g055435 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30
Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F+ Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFLLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: I3SNQ8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.5e-30
Identity = 67/156 (42.95%), Postives = 96/156 (61.54%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F  Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFFLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A067KIN7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08735 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-29
Identity = 64/140 (45.71%), Postives = 91/140 (65.00%), Query Frame = 1 

Query: 104 KLIFS-FLLWLS-FVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLII 163
           KLI S FLL L  FVP   AT V  CD+   YD+ VKGVEI+P+P+ RG     +++   
Sbjct: 5   KLIMSIFLLSLCLFVPLTQATDVKYCDKKGDYDVKVKGVEITPNPVARGQSATFSISATT 64

Query: 164 GKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQ 223
           G+ I  GK+V+D+ YFGWH++S+++D+C ETSCP T G+F +A  Q    F  PGSY + 
Sbjct: 65  GEAISGGKLVIDVAYFGWHIHSETHDLCEETSCPVTDGEFVVAHSQVLPGFTPPGSYSLT 124

Query: 224 ITIIDGHDNKLTCFGFDYEL 242
           + + DG+  +LTC  FD+ +
Sbjct: 125 MKMFDGNKRQLTCISFDFSI 144

[Close]
BLAST of CmoCh06G005380 vs. TrEMBL
Match: A0A0B2P9P0_GLYSO (Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Glycine soja GN=glysoja_042229 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.5e-29
Identity = 63/138 (45.65%), Postives = 90/138 (65.22%), Query Frame = 1 

Query: 104 KLIFSFLLWLSFVPQFF-ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIG 163
           K  F F   L  +  F  AT +H CD+ A YD+ VKGVEISP PI RG P   ++    G
Sbjct: 7   KFFFFFFSTLCLLYGFSNATDIHYCDKKADYDVEVKGVEISPDPIARGQPATFSIAATTG 66

Query: 164 KPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQI 223
           K +  GK+V+D+ YFGWH++S+++D+C ET+CP ++GDF +A  Q    F  PGSY +++
Sbjct: 67  KALSGGKLVIDVSYFGWHIHSETHDLCGETTCPVSAGDFVIAHSQVLPGFTPPGSYTLKM 126

Query: 224 TIIDGHDNKLTC--FGFD 239
            + DG+ ++LTC  FGFD
Sbjct: 127 KMFDGNKHELTCITFGFD 144

[Close]
BLAST of CmoCh06G005380 vs. TAIR10
Match: AT5G06480.1 (AT5G06480.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 9.9e-29
Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 1 

Query: 102 LMKLIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLII 161
           ++ L   FLL L  V    A  VH C+E A+Y++ VK V+ISP+PI  G P   T++   
Sbjct: 7   ILPLAAVFLLLL--VSPIVAIDVHYCEENAEYEVKVKEVDISPNPIAPGEPATFTISANT 66

Query: 162 GKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQ 221
           G+ I  GK+V+++ YFGWHV+S+++D+C ETSCP  +GDF +A  Q    +  PGSY ++
Sbjct: 67  GREISFGKLVIEVSYFGWHVHSETHDLCTETSCPIQTGDFLVAHSQVLPGYTPPGSYLLK 126

Query: 222 ITIIDGHDNKLTCFGFDYEL 242
           + ++D    +LTC  F +++
Sbjct: 127 MKMLDAKKKELTCIKFSFDI 144

[Close]
BLAST of CmoCh06G005380 vs. TAIR10
Match: AT3G11780.2 (AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 56/155 (36.13%), Postives = 88/155 (56.77%), Query Frame = 1 

Query: 105 LIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGKP 164
           L  S+ L +S +    AT VH CD   +Y++ V+GV+I+P PI RG P    ++      
Sbjct: 10  LAISYFLLVSTIVA--ATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTE 69

Query: 165 IIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALA-----PFQTP---------- 224
           I +GK+V+++ YFGWH++S+++D+C ETSCP   GDF +A     P  TP          
Sbjct: 70  ISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPTEKRFNLVS 129

Query: 225 ---LAFFVPGSYHMQITIIDGHDNKLTCFGFDYEL 242
                F V GSY +++ ++DG   +LTC  F +++
Sbjct: 130 IAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDI 162

[Close]
BLAST of CmoCh06G005380 vs. TAIR10
Match: AT3G44100.1 (AT3G44100.1 MD-2-related lipid recognition domain-containing protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-19
Identity = 47/132 (35.61%), Postives = 76/132 (57.58%), Query Frame = 1 

Query: 110 LLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGKPIIAGK 169
           LL + F+P   AT    CD+     + V GV+ISP P+V G      +    G+ I  GK
Sbjct: 13  LLSVFFLPALHATSFTYCDKRLD-PVKVTGVKISPDPVVSGAAATFKIFGSTGEDISGGK 72

Query: 170 MVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQITIIDGHD 229
           +V+ +LY G  V+++++D+C ET+CP   G F L+  QT  +   PG+Y +++TI D + 
Sbjct: 73  VVIRVLYVGIPVHTETHDLCDETACPVAPGSFVLSHSQTLPSITPPGTYTLKMTINDKNG 132

Query: 230 NKLTCFGFDYEL 242
            +LTC  F +++
Sbjct: 133 GRLTCISFKFKI 143

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|659084533|ref|XP_008442939.1| (PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucumis melo])

HSP 1 Score: 261.9 bits (668), Expect = 1.1e-66
Identity = 123/146 (84.25%), Postives = 131/146 (89.73%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQF-FATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 156
           MEP+  MKLIF FLLWL F PQF FATRV LCDETA+YDI VKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60

Query: 157 TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 216
           T NL+IG PIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLAFF+P
Sbjct: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 217 GSYHMQITIIDGHDNKLTCFGFDYEL 242
           GSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYEL 146

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|449437488|ref|XP_004136524.1| (PREDICTED: uncharacterized protein LOC101210162 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 9.6e-66
Identity = 121/146 (82.88%), Postives = 130/146 (89.04%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQF-FATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 156
           MEP   MKLIF FLLWL F PQF F+TR+ LCDETAKYDI VKGVEISP+P+VRGHPTNM
Sbjct: 1   MEPIFQMKLIFPFLLWLCFFPQFSFSTRLQLCDETAKYDITVKGVEISPNPVVRGHPTNM 60

Query: 157 TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 216
             NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLAFF+P
Sbjct: 61  IFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 217 GSYHMQITIIDGHDNKLTCFGFDYEL 242
           GSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYEL 146

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|700204095|gb|KGN59228.1| (hypothetical protein Csa_3G782750 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59
Identity = 125/210 (59.52%), Postives = 144/210 (68.57%), Query Frame = 1 

Query: 36  LHYFFIKFLCIPSAKPRRRRDSSRSPMAFVSFSFSHSTPPKPPFFTRLQSFIIRISQSSN 95
           L   F  F+ IP A+ RRRRD S SPMA  SF           F             S  
Sbjct: 12  LFIIFWNFIIIPFARLRRRRDFSHSPMAIESFYLKKEHFHGTHF-------------SDE 71

Query: 96  SMEPSLLMKLIFSFLLWLSFVPQFFATRVHLC----DETAKYDIMVKGVEISPSPIVRGH 155
           +  P   + ++FS L +++ +  F  + +  C    DETAKYDI VKGVEISP+P+VRGH
Sbjct: 72  ADFPISSLVVLFSTLHFVALLTPFNLSHLSECYVFEDETAKYDITVKGVEISPNPVVRGH 131

Query: 156 PTNMTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLA 215
           PTNM  NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLA
Sbjct: 132 PTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLA 191

Query: 216 FFVPGSYHMQITIIDGHDNKLTCFGFDYEL 242
           FF+PGSYHMQITI+DG DNKLTCFGFDYEL
Sbjct: 192 FFLPGSYHMQITIVDGDDNKLTCFGFDYEL 208

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|922401383|ref|XP_013467828.1| (MD-like lipid recognition domain protein/ML domain protein [Medicago truncatula])

HSP 1 Score: 140.6 bits (353), Expect = 3.8e-30
Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F+ Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFLLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

[Close]
BLAST of CmoCh06G005380 vs. NCBI nr
Match: gi|388507668|gb|AFK41900.1| (unknown [Medicago truncatula])

HSP 1 Score: 139.8 bits (351), Expect = 6.5e-30
Identity = 67/156 (42.95%), Postives = 96/156 (61.54%), Query Frame = 1 

Query: 97  MEPSLLMKLIFSFLLWLSFVPQFF--ATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 156
           ME  +  KL F F     F  Q F  AT VH C +   YD+ VKGV+ISP P+ RG P  
Sbjct: 1   MEKIITSKLFFFFFFSTLFFLQAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPAT 60

Query: 157 MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 216
            T++    + +  GK+VVD+ YFGWHVYS+++D+C E+SCP + GDF +A  Q   A+  
Sbjct: 61  FTISANTSQALSEGKLVVDVSYFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120

Query: 217 PGSYHMQITIIDGHDNKLTCFGFDYELPPLSSYIGI 251
           PGSY +++ + DG++N+LTC  F +++   SS   I
Sbjct: 121 PGSYSLKMKLYDGNNNELTCIKFGFDVGFFSSVADI 156

The following BLAST results are available for this feature:
BLAST of CmoCh06G005380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh06G005380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBM1_CUCSA9.3e-6059.52Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782750 PE=4 SV=1[more]
A0A072VUX7_MEDTR2.6e-3042.95MD-like lipid recognition domain protein/ML domain protein OS=Medicago truncatul... [more]
I3SNQ8_MEDTR4.5e-3042.95Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
A0A067KIN7_JATCU6.5e-2945.71Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08735 PE=4 SV=1[more]
A0A0B2P9P0_GLYSO8.5e-2945.65Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Glycine s... [more]
BLAST of CmoCh06G005380 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G06480.19.9e-2940.71 Immunoglobulin E-set superfamily protein[more]
AT3G11780.21.0e-2536.13 MD-2-related lipid recognition domain-containing protein / ML domain... [more]
AT3G44100.11.9e-1935.61 MD-2-related lipid recognition domain-containing protein[more]
BLAST of CmoCh06G005380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084533|ref|XP_008442939.1|1.1e-6684.25PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein D... [more]
gi|449437488|ref|XP_004136524.1|9.6e-6682.88PREDICTED: uncharacterized protein LOC101210162 [Cucumis sativus][more]
gi|700204095|gb|KGN59228.1|1.3e-5959.52hypothetical protein Csa_3G782750 [Cucumis sativus][more]
gi|922401383|ref|XP_013467828.1|3.8e-3042.95MD-like lipid recognition domain protein/ML domain protein [Medicago truncatula][more]
gi|388507668|gb|AFK41900.1|6.5e-3042.95unknown [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003172ML_dom
IPR014756Ig_E-set
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G005380.1CmoCh06G005380.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003172MD-2-related lipid-recognition domainPFAMPF02221E1_DerP2_DerF2coord: 123..240
score: 4.3
IPR003172MD-2-related lipid-recognition domainSMARTSM00737pgtp_13coord: 124..239
score: 6.2
IPR014756Immunoglobulin E-setunknownSSF81296E set domainscoord: 122..240
score: 9.33
NoneNo IPR availableGENE3DG3DSA:2.70.220.10coord: 123..241
score: 1.
NoneNo IPR availablePANTHERPTHR11306NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATEDcoord: 86..239
score: 2.2
NoneNo IPR availablePANTHERPTHR11306:SF13SUBFAMILY NOT NAMEDcoord: 86..239
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G005380Cucsa.242020Cucumber (Gy14) v1cgycmoB0681
CmoCh06G005380CmaCh06G005350Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G005380CmaCh14G003700Cucurbita maxima (Rimu)cmacmoB268
CmoCh06G005380Csa3G782750Cucumber (Chinese Long) v2cmocuB808
CmoCh06G005380MELO3C009555Melon (DHL92) v3.5.1cmomeB747
CmoCh06G005380ClCG10G018170Watermelon (Charleston Gray)cmowcgB729
CmoCh06G005380CSPI03G35780Wild cucumber (PI 183967)cmocpiB816
CmoCh06G005380Lsi03G018050Bottle gourd (USVL1VR-Ls)cmolsiB747
CmoCh06G005380Cp4.1LG08g09660Cucurbita pepo (Zucchini)cmocpeB797
CmoCh06G005380Cp4.1LG03g00430Cucurbita pepo (Zucchini)cmocpeB783
CmoCh06G005380MELO3C009555.2Melon (DHL92) v3.6.1cmomedB849
CmoCh06G005380CsaV3_3G038130Cucumber (Chinese Long) v3cmocucB0954
CmoCh06G005380Cla97C10G201140Watermelon (97103) v2cmowmbB818
CmoCh06G005380Bhi11G002039Wax gourdcmowgoB0974
CmoCh06G005380Carg03614Silver-seed gourdcarcmoB0351
CmoCh06G005380Carg16226Silver-seed gourdcarcmoB0933
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G005380CmoCh14G003700Cucurbita moschata (Rifu)cmocmoB222
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G005380Cucurbita maxima (Rimu)cmacmoB570
CmoCh06G005380Wild cucumber (PI 183967)cmocpiB842
CmoCh06G005380Cucumber (Chinese Long) v2cmocuB832
CmoCh06G005380Melon (DHL92) v3.5.1cmomeB754
CmoCh06G005380Watermelon (Charleston Gray)cmowcgB739
CmoCh06G005380Watermelon (97103) v1cmowmB782
CmoCh06G005380Watermelon (97103) v1cmowmB799
CmoCh06G005380Cucurbita pepo (Zucchini)cmocpeB774
CmoCh06G005380Bottle gourd (USVL1VR-Ls)cmolsiB737
CmoCh06G005380Cucumber (Gy14) v2cgybcmoB402
CmoCh06G005380Cucumber (Gy14) v2cgybcmoB837
CmoCh06G005380Melon (DHL92) v3.6.1cmomedB856
CmoCh06G005380Silver-seed gourdcarcmoB0562
CmoCh06G005380Silver-seed gourdcarcmoB1239
CmoCh06G005380Cucumber (Chinese Long) v3cmocucB0982
CmoCh06G005380Watermelon (97103) v2cmowmbB827
CmoCh06G005380Wax gourdcmowgoB1025
CmoCh06G005380Cucurbita moschata (Rifu)cmocmoB423