Cp4.1LG02g07920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g07920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCytomatrix protein-related, putative
LocationCp4.1LG02 : 362176 .. 365414 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCCTTCCGAATTCAATTTTCAAGTTCTCATTTTTCAACCATTCGTCCCAAAAGTCGACCGTTGCCAATCTCCATTCAACGGTCATTTTGTTCTTCATCGAACATTGTCGCTTGTTTTCTTGTTTCCTGTTCAGTGGATCGGAATGGGAAAGAGCAATGGATCACAAGTTTCGAATGAACGGCGAAATTGGGGCAAAATCTTCAATGCTCTTACTCAAATGCTACAGACCCAGCAAAATCAGCTCGAAACACTCGTCAAGGAGCGAAAACTTCTTGAAGATCGTGTTAAAATGCAGCACGAACGATGGGTCACTGATATTCGTCTTTACGACGACCATATCTCTCAGGTGATTTGTTTTACCTCTGCGATTTAGTGGATTTTTTAGTTTAATTATGGAATTGGAACTTCCCCCTTTCCTCTGAATTCTAGGGTTTCTAATGAACTTCGGAATTTTTTTCTTGTTCAGATGAAGAACGATTTGTTTGTGCAAGATATGGAACGCGCACTTCAAGCTTCAAAATCAGATCTGCTCACTGGATTGAAGCAGATGGAGGTCTATCTCTACCGACTGAAAATAGGTTTTTGTTTTTTCCCCCTCTTAAATCTGTTGAAGTTATGAATAATCGATCATTCAAAGAAGGAAATTCATGATGCCTCATAGGGTAGGCATTCTTACATAATATGTCACGTTCGGCAATGTTCCTTTCTCTCGGCTCTTTACTTCAATTTCGAGCACTCTTGTTTACACTAGTACGACAGCAATTAAGTTACTGTGACAATAATTTGGTCATTGAAGAGGGATTGGGACGAGGCCTTTTGGGGAAACCAAAAGCAAAGTCACCAGAACTTATGCTCAAAGTGGACAATATTGGACAATATCATACCATGGTGGAGAGTCTGGTTCCTAACATGGTATCAAAGCCATTAGCCATGTCAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGTCTCGAAAGTGTAGTCAATAGTGACTCAAGTGTCGAACAAAAAGTGTGCTTTGTTCGAGGGCTCCTAAGAAAAGAGTCAAGCCTTGATTAAGGGGAGATTGTTCGAGGGCTCCATAAGACTCAGGGGAGGCTCTATGGTGTGCTTTGTTCGAGGGGAGGATTGTTGAGGATTATTGGGAAAGGTGTCCCACATCAACTAATTAAGGGGTTGATCATGGGACACCTTTATTACTATCGTGAGAATCGTGGTTCCTAACAGTTATAATAGCTTCATAAATTTTGGTTGATGTGTGTTTTACTGTAGGACTAAGATGATGTAAATCTTGATATGCTTGGCAAAATTGGGACTCTCTGATCTGACAAATACTATACTTGCTTATGTTTACCAAATGCAGAACATTCAGAAGCTGAGTTGGACGATTTCAAATCTTTTTTTGATGATCTCCTCTTTCATAAAAGCTCCAGTCCACAAGTATGGTTCCTGGAATTCTGCGTGATTTTGGTTAGGTATCAGGACATGTTCTAATCTTCTGTCTCTGGCTGCAGGAAACTTCTTTGAGAAGTTCATCAGAAGCAGGCGAGGCAAATGGTAGAATAGAAGGTGTTTTGTTGTCAGCATGTGGAAATACTGATGAAGAAAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGAGTGAGTACGAAAAGCTAGTAACTGAGAAGAAATTCTTATGGAACCAATATAATCTTATGGAAAATGATTGCACAAGAAAATTGAAGAGCAAGCAGTCAGAACTTGAACTTGCAAACCAAAAGATAGAGAAACTTCTAGCCTCATTGGAAGAATTACAAAGTTCAAGCAATGAGAAGGATGGCATTATTGCAATGTTACAAACCCAAGTGGGGAAGATGGAAACTGACTCGAGTAAACTAAAACACGAAATTTCCCGACTCTCCCGTGACTTAGAACTGCAAAGGAAGTCTTTTAATGCTAATGCTACACCCGTGCTGAACCCATGCAACAAGGCAGGAACTAAGGCATTTAGCTCAGGAGGCAAAAACGGCACAAAGAACAGAAGTAACGTCATTGTCAACAAAGTCATGCTTTCGGCGCAACCTTCTCATTCAGTAAGTATACTATGATAATATGTGTTCTGATTTTGAACATTTTTCCTATTTATGGTTGATTTTTCGTGTTTAAATCGAGTATCGTGGATAAGTCGATCTAGGGATAAGTTGATTTTTTGCGGTGGCCAGGGAAACCAAAAGAGAAGAAGAGGTGATGCTAATTCAGATCCTGAGACTCCAAGGTTGTTTACCTCTAATTTCAAAGTACCCAAACTGAAGAAGGAAATCAAGTTGTAGATTGCCTAGAATGTTTGTGGCCTCAATTGGGTTTGGCTCTTGATTGTTGTATTTTCTTTCACCTGTGTGTTAATATTAGTGTATTATTGTTGTACCTGAAAATATTAGTGTCAGCCATTACTTATCCAATGTAATCTATCTGATTTAGAATTTAGAAATCTCTGTTTCAGGAGGCTTTTGACGCAGAATTGTAAAGATATTGTGGGAATATCAACAATATATTTTACATCAAAGTACTTGTTCCTATCCTTTGCTATTCTATGATGCATCTATGTCATAGTTAAGATGCAGGTGACCACTTGGAGAGGAATTAACGGCGGGTCCACAGCAATATCAGCAGCAGAAACAGCAACACCGCTGCGCCCCAAGGTGAGGTCTTTTCGGCCTCCTGAGCTGACCTGTTCTTGGTTCTCATGGCAGTTGACGCAACCGAACCAGACACAAGAAGGGAATTTGCAATAAAGATGAGCAAAAATGGCAAAGCTAGTAGGAAGAGCTTGAAGTCGAATGCCATCTCCTGGGACTGCAACGAAAGCAAAAGAAGGACGACGCCGAGAAAGGCGAGAAGAGGCATAGGCGGGAGAGACATGGAAGCCATTGTTCTCTCTGCCCATCCATACTTCCACTCTGGAACTCTTTCTTCCTCTGCCCAACTCATGGTGTCTTCAGGTTAGAAGCTTTTCTCTTACTGTTTTGGTGTAACAATCTGCAAAACAAACACAGAATGTTCCTTTATAAGTAAACTCCCAACCGACCTCTTTCCTTAACCAGAGACCTTGGAAGATTTTATATGATATGTTTCAGACAGCTATGGATAAATATGATAAGGCGGCGGTTAGGTCTGTTTTTTTGTTTGTTGTTTTGCATTCAGAAATGAGCACTTGGAGGCCATGCAATGGACCTTAGAAAATT

mRNA sequence

TTCCCTTCCGAATTCAATTTTCAAGTTCTCATTTTTCAACCATTCGTCCCAAAAGTCGACCGTTGCCAATCTCCATTCAACGGTCATTTTGTTCTTCATCGAACATTGTCGCTTGTTTTCTTGTTTCCTGTTCAGTGGATCGGAATGGGAAAGAGCAATGGATCACAAGTTTCGAATGAACGGCGAAATTGGGGCAAAATCTTCAATGCTCTTACTCAAATGCTACAGACCCAGCAAAATCAGCTCGAAACACTCGTCAAGGAGCGAAAACTTCTTGAAGATCGTGTTAAAATGCAGCACGAACGATGGGTCACTGATATTCGTCTTTACGACGACCATATCTCTCAGATGAAGAACGATTTGTTTGTGCAAGATATGGAACGCGCACTTCAAGCTTCAAAATCAGATCTGCTCACTGGATTGAAGCAGATGGAGGTCTATCTCTACCGACTGAAAATAGAACATTCAGAAGCTGAGTTGGACGATTTCAAATCTTTTTTTGATGATCTCCTCTTTCATAAAAGCTCCAGTCCACAAGAAACTTCTTTGAGAAGTTCATCAGAAGCAGGCGAGGCAAATGGTAGAATAGAAGGTGTTTTGTTGTCAGCATGTGGAAATACTGATGAAGAAAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGAGTGAGTACGAAAAGCTAGTAACTGAGAAGAAATTCTTATGGAACCAATATAATCTTATGGAAAATGATTGCACAAGAAAATTGAAGAGCAAGCAGTCAGAACTTGAACTTGCAAACCAAAAGATAGAGAAACTTCTAGCCTCATTGGAAGAATTACAAAGTTCAAGCAATGAGAAGGATGGCATTATTGCAATGTTACAAACCCAAGTGGGGAAGATGGAAACTGACTCGAGTAAACTAAAACACGAAATTTCCCGACTCTCCCGTGACTTAGAACTGCAAAGGAAGTCTTTTAATGCTAATGCTACACCCGTGCTGAACCCATGCAACAAGGCAGGAACTAAGGCATTTAGCTCAGGAGGCAAAAACGGCACAAAGAACAGAAGTAACGTCATTGTCAACAAAGTCATGCTTTCGGCGCAACCTTCTCATTCAGGAAACCAAAAGAGAAGAAGAGGTGATGCTAATTCAGATCCTGAGACTCCAAGGTTGTTTACCTCTAATTTCAAAGTACCCAAACTGAAGAAGGAAATCAAGTTGTAGATTGCCTAGAATGTTTGTGGCCTCAATTGGGTTTGGCTCTTGATTGTTGTATTTTCTTTCACCTGTGTGTTAATATTAGTGTATTATTGTTGTACCTGAAAATATTAGTGTCAGCCATTACTTATCCAATGTAATCTATCTGATTTAGAATTTAGAAATCTCTGTTTCAGGAGGCTTTTGACGCAGAATTGTAAAGATATTGTGGGAATATCAACAATATATTTTACATCAAAGTACTTGTTCCTATCCTTTGCTATTCTATGATGCATCTATGTCATAGTTAAGATGCAGGTGACCACTTGGAGAGGAATTAACGGCGGGTCCACAGCAATATCAGCAGCAGAAACAGCAACACCGCTGCGCCCCAAGGTGAGGTCTTTTCGGCCTCCTGAGCTGACCTGTTCTTGGTTCTCATGGCAGTTGACGCAACCGAACCAGACACAAGAAGGGAATTTGCAATAAAGATGAGCAAAAATGGCAAAGCTAGTAGGAAGAGCTTGAAGTCGAATGCCATCTCCTGGGACTGCAACGAAAGCAAAAGAAGGACGACGCCGAGAAAGGCGAGAAGAGGCATAGGCGGGAGAGACATGGAAGCCATTGTTCTCTCTGCCCATCCATACTTCCACTCTGGAACTCTTTCTTCCTCTGCCCAACTCATGGTGTCTTCAGGTTAGAAGCTTTTCTCTTACTGTTTTGGTGTAACAATCTGCAAAACAAACACAGAATGTTCCTTTATAAGTAAACTCCCAACCGACCTCTTTCCTTAACCAGAGACCTTGGAAGATTTTATATGATATGTTTCAGACAGCTATGGATAAATATGATAAGGCGGCGGTTAGGTCTGTTTTTTTGTTTGTTGTTTTGCATTCAGAAATGAGCACTTGGAGGCCATGCAATGGACCTTAGAAAATT

Coding sequence (CDS)

ATGGGAAAGAGCAATGGATCACAAGTTTCGAATGAACGGCGAAATTGGGGCAAAATCTTCAATGCTCTTACTCAAATGCTACAGACCCAGCAAAATCAGCTCGAAACACTCGTCAAGGAGCGAAAACTTCTTGAAGATCGTGTTAAAATGCAGCACGAACGATGGGTCACTGATATTCGTCTTTACGACGACCATATCTCTCAGATGAAGAACGATTTGTTTGTGCAAGATATGGAACGCGCACTTCAAGCTTCAAAATCAGATCTGCTCACTGGATTGAAGCAGATGGAGGTCTATCTCTACCGACTGAAAATAGAACATTCAGAAGCTGAGTTGGACGATTTCAAATCTTTTTTTGATGATCTCCTCTTTCATAAAAGCTCCAGTCCACAAGAAACTTCTTTGAGAAGTTCATCAGAAGCAGGCGAGGCAAATGGTAGAATAGAAGGTGTTTTGTTGTCAGCATGTGGAAATACTGATGAAGAAAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGAGTGAGTACGAAAAGCTAGTAACTGAGAAGAAATTCTTATGGAACCAATATAATCTTATGGAAAATGATTGCACAAGAAAATTGAAGAGCAAGCAGTCAGAACTTGAACTTGCAAACCAAAAGATAGAGAAACTTCTAGCCTCATTGGAAGAATTACAAAGTTCAAGCAATGAGAAGGATGGCATTATTGCAATGTTACAAACCCAAGTGGGGAAGATGGAAACTGACTCGAGTAAACTAAAACACGAAATTTCCCGACTCTCCCGTGACTTAGAACTGCAAAGGAAGTCTTTTAATGCTAATGCTACACCCGTGCTGAACCCATGCAACAAGGCAGGAACTAAGGCATTTAGCTCAGGAGGCAAAAACGGCACAAAGAACAGAAGTAACGTCATTGTCAACAAAGTCATGCTTTCGGCGCAACCTTCTCATTCAGGAAACCAAAAGAGAAGAAGAGGTGATGCTAATTCAGATCCTGAGACTCCAAGGTTGTTTACCTCTAATTTCAAAGTACCCAAACTGAAGAAGGAAATCAAGTTGTAG

Protein sequence

MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYEKLVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPKLKKEIKL
Homology
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BLAST of Cp4.1LG02g07920 vs. TrEMBL
Match: A0A0A0LH58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872190 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 2.1e-126
Identity = 257/367 (70.03%), Postives = 297/367 (80.93%), Query Frame = 1 

Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           MGKS+ S+ S ERRNWGKIFN LTQML+TQQNQLETLV ERKLLEDRVKMQHERWV DIR
Sbjct: 1   MGKSDRSKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           LY+DH+SQM+++LF+QDMER+ QASKSDLL G+KQ E+Y+ RLKIEHSEAEL+DFKSFFD
Sbjct: 61  LYEDHVSQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D + HK+S  QE+ LRS+SE  EANG  EG  +S  GNTDE RRS+ALE EVRR RSEYE
Sbjct: 121 DFIAHKNSKLQESFLRSASEPAEANGGGEGG-MSKFGNTDEVRRSEALESEVRRFRSEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           LVTE KF+WNQYN++E D + KLK+K SELE A+ K+E+LLA+LE+LQ
Sbjct: 181 KLASEKSSEVSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+NEKD +IAML+ QVGKMETDS KLK EISRLS DLE+QRKS NA ATPVL PC KAG
Sbjct: 241 SSNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPC-KAG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPK 357
            +    GGKNG+++RSNVIVNK   SAQPSHSGNQ +R     SDP TPRLFTS+FKVPK
Sbjct: 301 LRTSGLGGKNGSRSRSNVIVNKDAYSAQPSHSGNQMKRGAGDISDPGTPRLFTSSFKVPK 360

[Close]
BLAST of Cp4.1LG02g07920 vs. TrEMBL
Match: A0A061FKJ5_THECC (Cytomatrix protein-related, putative OS=Theobroma cacao GN=TCM_034227 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73
Identity = 173/365 (47.40%), Postives = 241/365 (66.03%), Query Frame = 1 

Query: 7   SQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHI 66
           SQVS+ER+NW KIF  L +ML+TQQ QLETL KERK+LEDR+KMQ+ERWV+D+RLY+DHI
Sbjct: 7   SQVSSERQNWDKIFEGLVEMLKTQQEQLETLAKERKILEDRIKMQYERWVSDVRLYEDHI 66

Query: 67  SQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHK 126
           SQ+K+D+  ++M RAL+A+K+DL+ GLK  E YL +LK+E +E EL DF+ +FD L    
Sbjct: 67  SQVKSDMESKEMARALEAAKADLMVGLKHRETYLCKLKLEETEDELTDFRIWFDIL---- 126

Query: 127 SSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRS-KALEGEVRRLRSEYEKLVTE 186
           S + ++ S R   E            +S C ++  +  + + LEG+VRRL+ +YE L +E
Sbjct: 127 SKNSKDISQRDPEETKRG--------MSGCKDSGSKSVTVRTLEGDVRRLKLKYENLASE 186

Query: 187 K-----------KFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNE 246
           K           KF WNQ+N++E   T KL SK SELE AN+KIE L++++EEL SS+ E
Sbjct: 187 KNSQITALLAENKFAWNQFNVLETQYTDKLNSKDSELEKANRKIEALISNMEELNSSNAE 246

Query: 247 KDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFS 306
           KD II  L+ +V + E ++SK  HE+S+ SR++EL RKS NA+ TPV+  C+ AG +   
Sbjct: 247 KDAIIERLKAEVSQKEANASKF-HEVSKKSREVELLRKSRNASCTPVIKRCS-AGGRTSV 306

Query: 307 SGGKNGTKNRSNVIVNKV--------MLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFK 352
            GGK+G ++  NVIV K         +L      S + KR++ D     ETP+LFTS FK
Sbjct: 307 LGGKHGGRDGGNVIVKKETSARNDPDLLKDSGKGSRSSKRKKDDVTPISETPKLFTSTFK 357

[Close]
BLAST of Cp4.1LG02g07920 vs. TrEMBL
Match: M5Y9L9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016441mg PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.2e-70
Identity = 175/370 (47.30%), Postives = 241/370 (65.14%), Query Frame = 1 

Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S+ S++ +NW   FN L QM++ QQ+QLETL K+R+LLEDRV+ Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQSQNWQNTFNGLVQMIRDQQSQLETLAKDRQLLEDRVRTQNERWTYDIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           L +D ISQMK DL  Q++  +LQA+K +L+ GLKQ E YL +LK+E++++EL+ FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
             L++K S      L+   E G+   RI     S   +  E++RSK LE ++RRL  +Y+
Sbjct: 121 --LYNKFS-----DLKGGGEDGDK--RISNT-KSPKKSKQEKQRSKQLEDDLRRLNQQYD 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           L+ EKKF+WNQY +ME + T KL+SK SE+E A  KI+  LA +E LQ
Sbjct: 181 KLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEAKIQNFLAHMEHLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+ EKDG IA+L ++V KME+DS+KLK EIS+LS +L+L RKS +A++TP+LN C  AG
Sbjct: 241 SSNKEKDGKIAILISKVAKMESDSNKLKEEISKLSTELDLLRKSTSASSTPLLNHCT-AG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQ--------PSHSGNQKRRRGDANSDPETPRLF 352
           T+  S  G N  K+R+NV V K   +AQ           S   KR+  D  +  ETP+LF
Sbjct: 301 TRTCSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISETPKLF 359

[Close]
BLAST of Cp4.1LG02g07920 vs. TrEMBL
Match: E0CQ59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14300 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.0e-64
Identity = 163/378 (43.12%), Postives = 228/378 (60.32%), Query Frame = 1 

Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S VS++R+ W KIFNAL  MLQTQQ Q+E+L KERKLLEDR+K Q++RW++D+ 
Sbjct: 1   MAIDKDSHVSSDRQKWQKIFNALVHMLQTQQTQVESLAKERKLLEDRIKFQYDRWISDVH 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
              D I+QM+    VQ+ ER ++A+KSDLL GLK+ EV L +LK+E ++ EL DFK    
Sbjct: 61  SLQDQIAQMEMKFTVQEKERLVEAAKSDLLMGLKKREVSLCKLKLESTDDELVDFKVLI- 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D L H+   P   S     E G    R +  L S     +EE+ +K LEGEVR+L+ EYE
Sbjct: 121 DFLSHECLDPNGISKVGDKEKG---SRGDNNLKSVKTTKEEEQCAKRLEGEVRKLKWEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
                       L+ E+ F+WNQY +ME++ + KL SK  E+E AN+KI+ LL  +E+L+
Sbjct: 181 NLASRNSAEVSALLAEQNFVWNQYKIMESNYSNKLNSKHVEVEQANEKIDNLLVGMEQLE 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           S +NEKD  I  L+T + KMET++ K   EISRLS+++EL RKS +A+ TP+LN C +  
Sbjct: 241 SLNNEKDDKIVKLKTDLAKMETETKKKNEEISRLSKEVELLRKSRSASVTPILNRCTE-- 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQP----------SHSGNQKRRRGDANSD----- 352
            +  S  GKN +    N+ + K   +++           S    +K+ RG    +     
Sbjct: 301 KQKTSGQGKNKSWIGRNISIKKETPASEKNTEKKKESSVSEKNTEKKSRGSKRKEINVTP 360

[Close]
BLAST of Cp4.1LG02g07920 vs. TrEMBL
Match: B9GQV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02380g PE=4 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 1.0e-64
Identity = 170/369 (46.07%), Postives = 240/369 (65.04%), Query Frame = 1 

Query: 1   MGKSNGSQV-SNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDI 60
           MG S  ++V +++R  W K+F  L ++L+ QQ QLETL+KERK+LEDR+K QHERWV+DI
Sbjct: 1   MGTSKRTKVVTSDREKWDKVFGGLVKLLKNQQEQLETLLKERKILEDRIKTQHERWVSDI 60

Query: 61  RLYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFF 120
           RLYDDHI Q+K  L  +DM   L+A+K DL+ GLKQ EV L++LK+E +E EL DF++ F
Sbjct: 61  RLYDDHILQIKGGLVEKDMACLLEAAKGDLMLGLKQREVSLHKLKLEQTEDELADFQALF 120

Query: 121 DDLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTD-EERRSKALEGEVRRLRSE 180
             L           SL+ +SE   ANG+         G++D +   +K LE EV RL+ E
Sbjct: 121 GYL---------SQSLKENSEE-TANGK-------GPGHSDLKSGEAKKLEAEVERLKLE 180

Query: 181 YEKLVTE-----------KKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEE 240
            EKLV E           K F+WNQY+++E++ T KL+ K++E+E AN+KI ++LA+ E 
Sbjct: 181 NEKLVFEKNSEVSALQKGKNFVWNQYDILESNLTNKLRIKEAEVEKANEKIAEVLATAEL 240

Query: 241 LQSSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNK 300
           LQSS++EK+ II  L T+V KME D+ K K E S+LSR+LEL RK   A  T V+ PC+ 
Sbjct: 241 LQSSNDEKNEIIQRLNTKVAKMEADTKKWKEETSKLSRELELLRKLRTAQITTVMKPCS- 300

Query: 301 AGTKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQ-----KRRRGDANSDPETPRLFT 352
           A  + F+SG K+  ++  N++  KV+ SA PS    +     K++R DA S  E PRLF+
Sbjct: 301 APVRTFTSGVKSCGRD-CNLVDRKVLQSAVPSKDAEKSIRSLKKKRMDA-SVFEAPRLFS 349

[Close]
BLAST of Cp4.1LG02g07920 vs. TAIR10
Match: AT1G19980.1 (AT1G19980.1 cytomatrix protein-related)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-51
Identity = 140/360 (38.89%), Postives = 209/360 (58.06%), Query Frame = 1 

Query: 10  SNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHISQM 69
           S+ER NW  IF +L ++LQT+Q+QLE+L+K++K+LE  +K  +E W++D+R Y+D +S M
Sbjct: 10  SSERENWETIFKSLVKILQTKQDQLESLLKDKKILESEIKTNNENWLSDVRNYEDQLSLM 69

Query: 70  KNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHKSSS 129
             ++    M + L+  KS+LL GLK+ +  L  LK+EHS  EL DFK++FD L  +    
Sbjct: 70  MKEIETTKMFQLLETYKSNLLCGLKEKDRSLCNLKLEHSLDELKDFKAWFDFLTLN---- 129

Query: 130 PQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYEKLVTEKK-- 189
              T++ S S      G  EG  +            K+LE ++R+L+ EYEKL +EKK  
Sbjct: 130 ---TNVESVS------GNSEGTAI------------KSLEAKIRKLKLEYEKLASEKKCE 189

Query: 190 ---------FLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNEKDGI 249
                    F WNQ+  +E++ T KLK K  E+  AN KI  L++  E+LQSS+ EKD  
Sbjct: 190 VSDLLRENGFAWNQFKCIESEFTDKLKRKDDEIVQANTKISSLISYQEQLQSSNQEKDET 249

Query: 250 IAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFSSGGK 309
           I+ L+ ++ +MET+S+K   EIS+L+RDLE  +KS     TPVL  C K   ++      
Sbjct: 250 ISRLKAKMAEMETNSTKKDEEISKLTRDLESAKKS--RGFTPVLTRCTKLEKRS------ 309

Query: 310 NGTKNRSNVIVNKVMLSAQPSH---SGNQKRRRGDANSDP----ETPRLFTSNFKVPKLK 352
           NG    S++   K   +A  ++   S + KR+R   N  P    E P+LFTS F++PKLK
Sbjct: 310 NGNTVGSHISTKKDKSAASTTNEKVSKSSKRKRA-KNMTPVSVSEVPKLFTSTFRLPKLK 335

[Close]
BLAST of Cp4.1LG02g07920 vs. NCBI nr
Match: gi|449437422|ref|XP_004136491.1| (PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 3.1e-126
Identity = 257/367 (70.03%), Postives = 297/367 (80.93%), Query Frame = 1 

Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           MGKS+ S+ S ERRNWGKIFN LTQML+TQQNQLETLV ERKLLEDRVKMQHERWV DIR
Sbjct: 1   MGKSDRSKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           LY+DH+SQM+++LF+QDMER+ QASKSDLL G+KQ E+Y+ RLKIEHSEAEL+DFKSFFD
Sbjct: 61  LYEDHVSQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D + HK+S  QE+ LRS+SE  EANG  EG  +S  GNTDE RRS+ALE EVRR RSEYE
Sbjct: 121 DFIAHKNSKLQESFLRSASEPAEANGGGEGG-MSKFGNTDEVRRSEALESEVRRFRSEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           LVTE KF+WNQYN++E D + KLK+K SELE A+ K+E+LLA+LE+LQ
Sbjct: 181 KLASEKSSEVSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+NEKD +IAML+ QVGKMETDS KLK EISRLS DLE+QRKS NA ATPVL PC KAG
Sbjct: 241 SSNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPC-KAG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPK 357
            +    GGKNG+++RSNVIVNK   SAQPSHSGNQ +R     SDP TPRLFTS+FKVPK
Sbjct: 301 LRTSGLGGKNGSRSRSNVIVNKDAYSAQPSHSGNQMKRGAGDISDPGTPRLFTSSFKVPK 360

[Close]
BLAST of Cp4.1LG02g07920 vs. NCBI nr
Match: gi|659132965|ref|XP_008466482.1| (PREDICTED: paramyosin [Cucumis melo])

HSP 1 Score: 444.1 bits (1141), Expect = 2.3e-121
Identity = 251/367 (68.39%), Postives = 295/367 (80.38%), Query Frame = 1 

Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           MGK++ S+ S ER+NWGKIFN LTQML+TQQNQLETLV ERKLLEDRVKMQHERWV DIR
Sbjct: 1   MGKTDRSKASIERQNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           LY+DHISQ++++L + DMER+LQASKSDLL+G+KQ E+Y+ RLKIE SEAE +DFKS FD
Sbjct: 61  LYEDHISQLRDELLLLDMERSLQASKSDLLSGMKQTELYVCRLKIEQSEAEFEDFKSVFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D + HK+S+ QE+ LRS+SE  EANG  EGV LS  GNTDE RRSKALE EVRRLRSEYE
Sbjct: 121 DFIAHKNSNLQESFLRSASEPAEANGGREGV-LSTFGNTDEVRRSKALEKEVRRLRSEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           LVTEKKF+W+QYN++E D + KLK+KQSELE A  K+E+LLA+LE+LQ
Sbjct: 181 KLASEKSSEVSALVTEKKFVWHQYNVIEADYSSKLKNKQSELEHARLKVEELLATLEQLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           +S++EKD +IA LQ QVGKMETDS KLK EISRLS DLE+QRKS N  ATPVL PC    
Sbjct: 241 NSNDEKDDVIATLQNQVGKMETDSCKLKDEISRLSNDLEVQRKSVNPTATPVLKPCK--A 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPK 357
           T++   G KN +K+RSNV VNK + SAQPSHSGNQK+R  D  SDP TPRLFTS+FKVPK
Sbjct: 301 TRSSGLGVKNVSKSRSNVTVNKDVSSAQPSHSGNQKKRGADDISDPGTPRLFTSSFKVPK 360

[Close]
BLAST of Cp4.1LG02g07920 vs. NCBI nr
Match: gi|590594269|ref|XP_007017804.1| (Cytomatrix protein-related, putative [Theobroma cacao])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 173/365 (47.40%), Postives = 241/365 (66.03%), Query Frame = 1 

Query: 7   SQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHI 66
           SQVS+ER+NW KIF  L +ML+TQQ QLETL KERK+LEDR+KMQ+ERWV+D+RLY+DHI
Sbjct: 7   SQVSSERQNWDKIFEGLVEMLKTQQEQLETLAKERKILEDRIKMQYERWVSDVRLYEDHI 66

Query: 67  SQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHK 126
           SQ+K+D+  ++M RAL+A+K+DL+ GLK  E YL +LK+E +E EL DF+ +FD L    
Sbjct: 67  SQVKSDMESKEMARALEAAKADLMVGLKHRETYLCKLKLEETEDELTDFRIWFDIL---- 126

Query: 127 SSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRS-KALEGEVRRLRSEYEKLVTE 186
           S + ++ S R   E            +S C ++  +  + + LEG+VRRL+ +YE L +E
Sbjct: 127 SKNSKDISQRDPEETKRG--------MSGCKDSGSKSVTVRTLEGDVRRLKLKYENLASE 186

Query: 187 K-----------KFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNE 246
           K           KF WNQ+N++E   T KL SK SELE AN+KIE L++++EEL SS+ E
Sbjct: 187 KNSQITALLAENKFAWNQFNVLETQYTDKLNSKDSELEKANRKIEALISNMEELNSSNAE 246

Query: 247 KDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFS 306
           KD II  L+ +V + E ++SK  HE+S+ SR++EL RKS NA+ TPV+  C+ AG +   
Sbjct: 247 KDAIIERLKAEVSQKEANASKF-HEVSKKSREVELLRKSRNASCTPVIKRCS-AGGRTSV 306

Query: 307 SGGKNGTKNRSNVIVNKV--------MLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFK 352
            GGK+G ++  NVIV K         +L      S + KR++ D     ETP+LFTS FK
Sbjct: 307 LGGKHGGRDGGNVIVKKETSARNDPDLLKDSGKGSRSSKRKKDDVTPISETPKLFTSTFK 357

[Close]
BLAST of Cp4.1LG02g07920 vs. NCBI nr
Match: gi|645229002|ref|XP_008221258.1| (PREDICTED: nuclear distribution protein nudE homolog 1 [Prunus mume])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 171/370 (46.22%), Postives = 244/370 (65.95%), Query Frame = 1 

Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S+ S++R+NW   F+ L QM++ QQ+QLETL K+R+LLEDRV++Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQRQNWQNTFSGLVQMIRYQQSQLETLAKDRQLLEDRVRIQNERWTYDIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           L +D ISQMK DL  Q++  +LQA+K +L+ GLKQ E YL +LK+E++++EL+ FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
             L++K S      L+   E G+   RI     S   +  E++RSK LE ++RRL+ +Y+
Sbjct: 121 --LYNKFS-----DLKGGGEDGDK--RISNT-KSPKKSKQEKQRSKQLEDDLRRLKQQYD 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           L+ EKKF+WNQY +ME + T KL+SK SE+E A   I+  LA +E LQ
Sbjct: 181 KLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEANIQNFLAHMEHLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+ EKDG +A+L +++ KME+DS+KLK E+S+LS +L+L RKS +A++TP+LN C  AG
Sbjct: 241 SSNKEKDGKVAILISKIAKMESDSNKLKEEVSKLSTELDLLRKSTSASSTPLLNHCT-AG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQ--------PSHSGNQKRRRGDANSDPETPRLF 352
           T+ +S  G N  K+R+NV V K   +AQ           S   KR+  D  +  ETP+LF
Sbjct: 301 TRTYSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISETPKLF 359

[Close]
BLAST of Cp4.1LG02g07920 vs. NCBI nr
Match: gi|596299046|ref|XP_007227591.1| (hypothetical protein PRUPE_ppa016441mg [Prunus persica])

HSP 1 Score: 274.2 bits (700), Expect = 3.1e-70
Identity = 175/370 (47.30%), Postives = 241/370 (65.14%), Query Frame = 1 

Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S+ S++ +NW   FN L QM++ QQ+QLETL K+R+LLEDRV+ Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQSQNWQNTFNGLVQMIRDQQSQLETLAKDRQLLEDRVRTQNERWTYDIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           L +D ISQMK DL  Q++  +LQA+K +L+ GLKQ E YL +LK+E++++EL+ FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
             L++K S      L+   E G+   RI     S   +  E++RSK LE ++RRL  +Y+
Sbjct: 121 --LYNKFS-----DLKGGGEDGDK--RISNT-KSPKKSKQEKQRSKQLEDDLRRLNQQYD 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           L+ EKKF+WNQY +ME + T KL+SK SE+E A  KI+  LA +E LQ
Sbjct: 181 KLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEAKIQNFLAHMEHLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+ EKDG IA+L ++V KME+DS+KLK EIS+LS +L+L RKS +A++TP+LN C  AG
Sbjct: 241 SSNKEKDGKIAILISKVAKMESDSNKLKEEISKLSTELDLLRKSTSASSTPLLNHCT-AG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQ--------PSHSGNQKRRRGDANSDPETPRLF 352
           T+  S  G N  K+R+NV V K   +AQ           S   KR+  D  +  ETP+LF
Sbjct: 301 TRTCSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISETPKLF 359

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g07920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG02g07920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH58_CUCSA2.1e-12670.03Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872190 PE=4 SV=1[more]
A0A061FKJ5_THECC1.6e-7347.40Cytomatrix protein-related, putative OS=Theobroma cacao GN=TCM_034227 PE=4 SV=1[more]
M5Y9L9_PRUPE2.2e-7047.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016441mg PE=4 SV=1[more]
E0CQ59_VITVI1.0e-6443.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14300 PE=4 SV=... [more]
B9GQV1_POPTR1.0e-6446.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02380g PE=4 SV=2[more]
BLAST of Cp4.1LG02g07920 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19980.11.5e-5138.89 cytomatrix protein-related[more]
BLAST of Cp4.1LG02g07920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437422|ref|XP_004136491.1|3.1e-12670.03PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus][more]
gi|659132965|ref|XP_008466482.1|2.3e-12168.39PREDICTED: paramyosin [Cucumis melo][more]
gi|590594269|ref|XP_007017804.1|2.3e-7347.40Cytomatrix protein-related, putative [Theobroma cacao][more]
gi|645229002|ref|XP_008221258.1|2.4e-7046.22PREDICTED: nuclear distribution protein nudE homolog 1 [Prunus mume][more]
gi|596299046|ref|XP_007227591.1|3.1e-7047.30hypothetical protein PRUPE_ppa016441mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g07920.1Cp4.1LG02g07920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 204..231
score: -coord: 158..185
score: -coord: 20..54
scor
NoneNo IPR availablePANTHERPTHR35992FAMILY NOT NAMEDcoord: 1..351
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g07920Cucsa.159900Cucumber (Gy14) v1cgycpeB0437
Cp4.1LG02g07920Cucsa.343050Cucumber (Gy14) v1cgycpeB0885
Cp4.1LG02g07920CmaCh01G019730Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g07920CmaCh05G003060Cucurbita maxima (Rimu)cmacpeB780
Cp4.1LG02g07920CmoCh05G003090Cucurbita moschata (Rifu)cmocpeB734
Cp4.1LG02g07920CmoCh01G020310Cucurbita moschata (Rifu)cmocpeB450
Cp4.1LG02g07920Cla020841Watermelon (97103) v1cpewmB559
Cp4.1LG02g07920Cla022423Watermelon (97103) v1cpewmB541
Cp4.1LG02g07920Csa2G368790Cucumber (Chinese Long) v2cpecuB539
Cp4.1LG02g07920Csa3G872190Cucumber (Chinese Long) v2cpecuB556
Cp4.1LG02g07920MELO3C003750Melon (DHL92) v3.5.1cpemeB516
Cp4.1LG02g07920MELO3C011012Melon (DHL92) v3.5.1cpemeB508
Cp4.1LG02g07920ClCG05G018260Watermelon (Charleston Gray)cpewcgB509
Cp4.1LG02g07920ClCG08G014280Watermelon (Charleston Gray)cpewcgB528
Cp4.1LG02g07920CSPI03G43430Wild cucumber (PI 183967)cpecpiB558
Cp4.1LG02g07920CSPI02G20860Wild cucumber (PI 183967)cpecpiB541
Cp4.1LG02g07920Lsi08G013180Bottle gourd (USVL1VR-Ls)cpelsiB477
Cp4.1LG02g07920MELO3C011012.2Melon (DHL92) v3.6.1cpemedB605
Cp4.1LG02g07920MELO3C003750.2Melon (DHL92) v3.6.1cpemedB614
Cp4.1LG02g07920CsaV3_3G045880Cucumber (Chinese Long) v3cpecucB0693
Cp4.1LG02g07920CsaV3_2G029530Cucumber (Chinese Long) v3cpecucB0676
Cp4.1LG02g07920Bhi09G001784Wax gourdcpewgoB0716
Cp4.1LG02g07920Bhi04G000128Wax gourdcpewgoB0686
Cp4.1LG02g07920CsGy3G040980Cucumber (Gy14) v2cgybcpeB387
Cp4.1LG02g07920Carg09404Silver-seed gourdcarcpeB0202
Cp4.1LG02g07920Carg17199Silver-seed gourdcarcpeB1309
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g07920Cp4.1LG11g02430Cucurbita pepo (Zucchini)cpecpeB125
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g07920Cucurbita moschata (Rifu)cmocpeB319
Cp4.1LG02g07920Cucurbita moschata (Rifu)cmocpeB521
Cp4.1LG02g07920Cucurbita moschata (Rifu)cmocpeB819
Cp4.1LG02g07920Wild cucumber (PI 183967)cpecpiB586
Cp4.1LG02g07920Cucumber (Chinese Long) v2cpecuB540
Cp4.1LG02g07920Cucumber (Chinese Long) v2cpecuB585
Cp4.1LG02g07920Bottle gourd (USVL1VR-Ls)cpelsiB436
Cp4.1LG02g07920Bottle gourd (USVL1VR-Ls)cpelsiB462
Cp4.1LG02g07920Watermelon (97103) v1cpewmB577
Cp4.1LG02g07920Cucumber (Gy14) v2cgybcpeB224
Cp4.1LG02g07920Cucumber (Gy14) v2cgybcpeB226
Cp4.1LG02g07920Melon (DHL92) v3.6.1cpemedB629
Cp4.1LG02g07920Silver-seed gourdcarcpeB0602
Cp4.1LG02g07920Silver-seed gourdcarcpeB0153
Cp4.1LG02g07920Silver-seed gourdcarcpeB0917
Cp4.1LG02g07920Silver-seed gourdcarcpeB1362
Cp4.1LG02g07920Cucumber (Chinese Long) v3cpecucB0692
Cp4.1LG02g07920Cucurbita pepo (Zucchini)cpecpeB091
Cp4.1LG02g07920Cucurbita pepo (Zucchini)cpecpeB241
Cp4.1LG02g07920Cucurbita pepo (Zucchini)cpecpeB301
Cp4.1LG02g07920Cucurbita pepo (Zucchini)cpecpeB415
Cp4.1LG02g07920Cucurbita pepo (Zucchini)cpecpeB459
Cp4.1LG02g07920Cucurbita pepo (Zucchini)cpecpeB471
Cp4.1LG02g07920Cucumber (Gy14) v1cgycpeB0042
Cp4.1LG02g07920Cucurbita maxima (Rimu)cmacpeB045
Cp4.1LG02g07920Cucurbita maxima (Rimu)cmacpeB190
Cp4.1LG02g07920Cucurbita maxima (Rimu)cmacpeB570
Cp4.1LG02g07920Cucurbita maxima (Rimu)cmacpeB678
Cp4.1LG02g07920Cucurbita maxima (Rimu)cmacpeB882
Cp4.1LG02g07920Cucurbita moschata (Rifu)cmocpeB020
Cp4.1LG02g07920Cucurbita moschata (Rifu)cmocpeB166