Cla020841 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla020841
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Cytomatrix protein-like protein (AHRD V1 ***- Q84JE5_ARATH)
Location	Chr5 : 26323918 .. 26325735 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGAGCGATACATCTCAAGCTTCCATTGAACGGCGAAATTGGGGCAAAATCTTCAATGGTCTCACACAAATGCTACAGACGCAACAAAATCAGCTCGAAACGCTCGTCAACGAGCGAAAACTTCTCGAAGACCGCATTAAAATGCAGCACGAACGATGGATCGCTGATATTCGTCTTTACGAGGATCATATCTCTCAGGTCATTTTATATCTCTGAAATTTTGTGGAATTTTTCGTCTAATTATTGAATTGGAACTTCCCCCTTTCCTCTAAAAATTAGGGTTTCTGATGAATTTTGGAATTTGCTTCTTGTGTAGATGAAGGATGATTTGTTGTTGCAAGATATGGAACGCTCACTTCAAACCTCGAAATCAGATCTGCTAACTGGAATGAAGCAGTCGGAGTTGTACCTCTGCCGACTGAAAATAGGTTTTTGTTTATTTTCCCCTTTTAATCTTTTGAAGTTACGAATAGTCAAAGCATTGATTGGATAAAATTCATGATGCCTCATGGGCGAAATCTTCTTCCCTTGGTACTTTGGTCAAATTTCAAGGAATGTAAATCGAAATACGATACTTAGAAGTAAGTTCAAGGACGCTTGTTTATACACTAGCAACAAAGTCGGTGTGACAACGATTTGGCGATTGAAAAATTTTCTCTAATTGGAATATGGTTCAAAATACTTCGGTAAACTCTTGTTTGTATTGGTTGTACTGTAATTTGTGTTGCGATGATAGGAAGAACTATATGAACGTTTTTACCTTTGGCAAAGTAGGGATTCTCAGATCTGACAATACTATACTGGCTTACGTTCTCCCAATGCAGAACATTCAGAAGCAGAGTTGGAAGATTTCAAATCTTTCTTTGACGATCTTATCTCTCATAGAAACTCCAATCCACAAGTATGGTTCATGGACTTCTTTTCTGGTTAAGAGTATTGGGACAAGTTCTAATCTTCTGTCTCTGGTTGCAGGACTCATCTTTGAGAAGTGCATCAGAACCAGCTCAGGCAAATGGTGGAAGAGAAAGTGGTTTGTCCGCATGTGGAAATACAGACGAAGCGAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGTGTGAATATGAAAAACTTGCCTCAGAAAAGAGTTTGGAGGTGTCTGCGCTGGTGGCCGAGAAGAAATTTGTATGGAATCAGTATAATGTTATACAAGATGACTTCTCAAGTAAATTGGAGACTAAGCAGTTAGAGCTTGAACGTGCACACCTAAAGGTAGAGAAACTTCTAGCCACATTGGAACAATTACAAAGCTCAAACAATGAGAAGGATGGTGTTATTGCAACGTTAAGAAACCAAATGGGGAAGATGGAAACTGACTCATGTAAATTAAAAGACGAAATTTCCAGACTCTCACACAATTTAGAACTGCAAAGGAAGTCTATGAATGCAACTGCCACACCTGTGCTAAACCCATGCAAGGCAGGAACTAGGCCATCTAGTTTGGGAGGCAAAAATGGCACGAAAAGCAGAAGTAATGTCACTGTTAACAAAGACGCATCTTCTGCACAACCTTCTCATTCGGTAAGCAGACTATGATAATATGTGTATTATTTATGTAAATAATGGTTTTGACTTTGAACATTTTTACATTTTGTGGTCCATTTTGTGTGTTCATATGGAAATTCTAACTCAAATTCAACTTTTCAATGTGGGTAGGGAAACCAAAAGAAGAGAGGCGCTGATGATATTTCAAATCTAGGGACTCCAAGGTTGTTTACCTCTAGTTTCAAGGTCCCTAAACTGAAGAACGAACTCAATTTGTAG

mRNA sequence

ATGGGAAAGAGCGATACATCTCAAGCTTCCATTGAACGGCGAAATTGGGGCAAAATCTTCAATGGTCTCACACAAATGCTACAGACGCAACAAAATCAGCTCGAAACGCTCGTCAACGAGCGAAAACTTCTCGAAGACCGCATTAAAATGCAGCACGAACGATGGATCGCTGATATTCGTCTTTACGAGGATCATATCTCTCAGATGAAGGATGATTTGTTGTTGCAAGATATGGAACGCTCACTTCAAACCTCGAAATCAGATCTGCTAACTGGAATGAAGCAGTCGGAGTTGTACCTCTGCCGACTGAAAATAGAACATTCAGAAGCAGAGTTGGAAGATTTCAAATCTTTCTTTGACGATCTTATCTCTCATAGAAACTCCAATCCACAAGACTCATCTTTGAGAAGTGCATCAGAACCAGCTCAGGCAAATGGTGGAAGAGAAAGTGGTTTGTCCGCATGTGGAAATACAGACGAAGCGAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGTGTGAATATGAAAAACTTGCCTCAGAAAAGAGTTTGGAGGTGTCTGCGCTGGTGGCCGAGAAGAAATTTGTATGGAATCAGTATAATGTTATACAAGATGACTTCTCAAGTAAATTGGAGACTAAGCAGTTAGAGCTTGAACGTGCACACCTAAAGGTAGAGAAACTTCTAGCCACATTGGAACAATTACAAAGCTCAAACAATGAGAAGGATGGTGTTATTGCAACGTTAAGAAACCAAATGGGGAAGATGGAAACTGACTCATGTAAATTAAAAGACGAAATTTCCAGACTCTCACACAATTTAGAACTGCAAAGGAAGTCTATGAATGCAACTGCCACACCTGTGCTAAACCCATGCAAGGCAGGAACTAGGCCATCTAGTTTGGGAGGCAAAAATGGCACGAAAAGCAGAAGTAATGTCACTGTTAACAAAGACGCATCTTCTGCACAACCTTCTCATTCGGGAAACCAAAAGAAGAGAGGCGCTGATGATATTTCAAATCTAGGGACTCCAAGGTTGTTTACCTCTAGTTTCAAGGTCCCTAAACTGAAGAACGAACTCAATTTGTAG

Coding sequence (CDS)

ATGGGAAAGAGCGATACATCTCAAGCTTCCATTGAACGGCGAAATTGGGGCAAAATCTTCAATGGTCTCACACAAATGCTACAGACGCAACAAAATCAGCTCGAAACGCTCGTCAACGAGCGAAAACTTCTCGAAGACCGCATTAAAATGCAGCACGAACGATGGATCGCTGATATTCGTCTTTACGAGGATCATATCTCTCAGATGAAGGATGATTTGTTGTTGCAAGATATGGAACGCTCACTTCAAACCTCGAAATCAGATCTGCTAACTGGAATGAAGCAGTCGGAGTTGTACCTCTGCCGACTGAAAATAGAACATTCAGAAGCAGAGTTGGAAGATTTCAAATCTTTCTTTGACGATCTTATCTCTCATAGAAACTCCAATCCACAAGACTCATCTTTGAGAAGTGCATCAGAACCAGCTCAGGCAAATGGTGGAAGAGAAAGTGGTTTGTCCGCATGTGGAAATACAGACGAAGCGAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGTGTGAATATGAAAAACTTGCCTCAGAAAAGAGTTTGGAGGTGTCTGCGCTGGTGGCCGAGAAGAAATTTGTATGGAATCAGTATAATGTTATACAAGATGACTTCTCAAGTAAATTGGAGACTAAGCAGTTAGAGCTTGAACGTGCACACCTAAAGGTAGAGAAACTTCTAGCCACATTGGAACAATTACAAAGCTCAAACAATGAGAAGGATGGTGTTATTGCAACGTTAAGAAACCAAATGGGGAAGATGGAAACTGACTCATGTAAATTAAAAGACGAAATTTCCAGACTCTCACACAATTTAGAACTGCAAAGGAAGTCTATGAATGCAACTGCCACACCTGTGCTAAACCCATGCAAGGCAGGAACTAGGCCATCTAGTTTGGGAGGCAAAAATGGCACGAAAAGCAGAAGTAATGTCACTGTTAACAAAGACGCATCTTCTGCACAACCTTCTCATTCGGGAAACCAAAAGAAGAGAGGCGCTGATGATATTTCAAATCTAGGGACTCCAAGGTTGTTTACCTCTAGTTTCAAGGTCCCTAAACTGAAGAACGAACTCAATTTGTAG

Protein sequence

MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIRLYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFDDLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNTDEARRSKALEGEVRRLRCEYEKLASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQSSNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTRPSSLGGKNGTKSRSNVTVNKDASSAQPSHSGNQKKRGADDISNLGTPRLFTSSFKVPKLKNELNL

Homology

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BLAST of Cla020841 vs. TrEMBL
Match: A0A0A0LH58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872190 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 1.7e-166
Identity = 300/365 (82.19%), Postives = 327/365 (89.59%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           MGKSD S+ SIERRNWGKIFNGLTQML+TQQNQLETLV ERKLLEDR+KMQHERW+ADIR
Sbjct: 1   MGKSDRSKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           LYEDH+SQM+D+L LQDMERS Q SKSDLL GMKQ+ELY+CRLKIEHSEAELEDFKSFFD
Sbjct: 61  LYEDHVSQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNTDEARRSKALEGEVRRLRCEYEK 180
           D I+H+NS  Q+S LRSASEPA+ANGG E G+S  GNTDE RRS+ALE EVRR R EYEK
Sbjct: 121 DFIAHKNSKLQESFLRSASEPAEANGGGEGGMSKFGNTDEVRRSEALESEVRRFRSEYEK 180

Query: 181 LASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQS 240
           LASEKS EVSALV E KFVWNQYNVI+ D+SSKL+ K  ELERAHLKVE+LLATLEQLQS
Sbjct: 181 LASEKSSEVSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQS 240

Query: 241 SNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTR 300
           SNNEKD VIA LRNQ+GKMETDS KLKDEISRLSH+LE+QRKS+NATATPVL PCKAG R
Sbjct: 241 SNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPCKAGLR 300

Query: 301 PSSLGGKNGTKSRSNVTVNKDASSAQPSHSGNQKKRGADDISNLGTPRLFTSSFKVPKLK 360
            S LGGKNG++SRSNV VNKDA SAQPSHSGNQ KRGA DIS+ GTPRLFTSSFKVPKLK
Sbjct: 301 TSGLGGKNGSRSRSNVIVNKDAYSAQPSHSGNQMKRGAGDISDPGTPRLFTSSFKVPKLK 360

Query: 361 NELNL 366
           NE+NL
Sbjct: 361 NEINL 365

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BLAST of Cla020841 vs. TrEMBL
Match: M5Y9L9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016441mg PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.8e-88
Identity = 185/376 (49.20%), Postives = 253/376 (67.29%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           M   + S+AS + +NW   FNGL QM++ QQ+QLETL  +R+LLEDR++ Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQSQNWQNTFNGLVQMIRDQQSQLETLAKDRQLLEDRVRTQNERWTYDIR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           L ED ISQMK DL  Q++  SLQ +K +L+ G+KQ E YL +LK+E++++ELE FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNT-------DEARRSKALEGEVRR 180
                             ++ +   GG E G     NT        E +RSK LE ++RR
Sbjct: 121 ----------------LYNKFSDLKGGGEDGDKRISNTKSPKKSKQEKQRSKQLEDDLRR 180

Query: 181 LRCEYEKLASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLA 240
           L  +Y+KLASEKS EVSAL+AEKKFVWNQY ++++++++KL +K  E+E+A  K++  LA
Sbjct: 181 LNQQYDKLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEAKIQNFLA 240

Query: 241 TLEQLQSSNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLN 300
            +E LQSSN EKDG IA L +++ KME+DS KLK+EIS+LS  L+L RKS +A++TP+LN
Sbjct: 241 HMEHLQSSNKEKDGKIAILISKVAKMESDSNKLKEEISKLSTELDLLRKSTSASSTPLLN 300

Query: 301 PCKAGTRPSSLGGKNGTKSRSNVTVNKDASSAQ------PSHSGNQ-KKRGADDISNLG- 360
            C AGTR  SL G N  K R+NVTV KD+S+AQ       +  G+   KR  DD+  +  
Sbjct: 301 HCTAGTRTCSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISE 360

Query: 361 TPRLFTSSFKVPKLKN 362
           TP+LF+S FKVPKLKN
Sbjct: 361 TPKLFSSRFKVPKLKN 360

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BLAST of Cla020841 vs. TrEMBL
Match: A0A061FKJ5_THECC (Cytomatrix protein-related, putative OS=Theobroma cacao GN=TCM_034227 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.1e-85
Identity = 172/363 (47.38%), Postives = 250/363 (68.87%), Query Frame = 1


Query: 7   SQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIRLYEDHI 66
           SQ S ER+NW KIF GL +ML+TQQ QLETL  ERK+LEDRIKMQ+ERW++D+RLYEDHI
Sbjct: 7   SQVSSERQNWDKIFEGLVEMLKTQQEQLETLAKERKILEDRIKMQYERWVSDVRLYEDHI 66

Query: 67  SQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFDDLISHR 126
           SQ+K D+  ++M R+L+ +K+DL+ G+K  E YLC+LK+E +E EL DF+ +FD L    
Sbjct: 67  SQVKSDMESKEMARALEAAKADLMVGLKHRETYLCKLKLEETEDELTDFRIWFDIL---- 126

Query: 127 NSNPQDSSLRSASEPAQANGGRESGLSACGNT-DEARRSKALEGEVRRLRCEYEKLASEK 186
           + N +D S R   E        + G+S C ++  ++   + LEG+VRRL+ +YE LASEK
Sbjct: 127 SKNSKDISQRDPEE-------TKRGMSGCKDSGSKSVTVRTLEGDVRRLKLKYENLASEK 186

Query: 187 SLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQSSNNEK 246
           + +++AL+AE KF WNQ+NV++  ++ KL +K  ELE+A+ K+E L++ +E+L SSN EK
Sbjct: 187 NSQITALLAENKFAWNQFNVLETQYTDKLNSKDSELEKANRKIEALISNMEELNSSNAEK 246

Query: 247 DGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTRPSSLG 306
           D +I  L+ ++ + E ++ K   E+S+ S  +EL RKS NA+ TPV+  C AG R S LG
Sbjct: 247 DAIIERLKAEVSQKEANASKF-HEVSKKSREVELLRKSRNASCTPVIKRCSAGGRTSVLG 306

Query: 307 GKNGTKSRSNVTVNKDASS------AQPSHSGNQ-KKRGADDISNLG-TPRLFTSSFKVP 361
           GK+G +   NV V K+ S+       + S  G++  KR  DD++ +  TP+LFTS+FKVP
Sbjct: 307 GKHGGRDGGNVIVKKETSARNDPDLLKDSGKGSRSSKRKKDDVTPISETPKLFTSTFKVP 357

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BLAST of Cla020841 vs. TrEMBL
Match: A0A0B0PTE6_GOSAR (Keratin, type II cytoskeletal 8 OS=Gossypium arboreum GN=F383_13705 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.8e-81
Identity = 166/370 (44.86%), Postives = 243/370 (65.68%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           MG    SQ S ER+ W KIF GL +ML+TQQ QLETL  ERK+LEDRIKMQ+ERW++D+R
Sbjct: 1   MGAKTRSQDSSERQKWDKIFEGLVKMLKTQQQQLETLSKERKILEDRIKMQYERWVSDVR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           LYEDHISQMK DL  ++M R L+ +K+D++ G+K  E YLC++K+E +E EL DF+ +FD
Sbjct: 61  LYEDHISQMKSDLESEEMARVLEATKADMMVGLKHREAYLCKMKLEEAEDELTDFRIWFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNTDEARRSKALEGEVRRLRCEYEK 180
            L      N +D S R+  E  +    R+   S      ++   +ALE ++RRL+ +Y+ 
Sbjct: 121 IL----GKNSKDISQRAPIETKKGTSARKRSGS------KSVTLEALEDDIRRLQLQYKN 180

Query: 181 LASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQS 240
           L SEKS +V+ALVAE KF WNQ+NV++  ++ KL TKQ EL++A+ ++E L++ +E+L+S
Sbjct: 181 LVSEKSCQVTALVAENKFAWNQFNVLESQYTDKLNTKQSELDKANKRIEALMSDMEELRS 240

Query: 241 SNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTR 300
           SN EKD +I  L+ ++ + + D+ + + ++S  S  +E  RKS +A+ TPV+  C AG R
Sbjct: 241 SNAEKDEIIERLKAELSRKKADASRFQ-QVSITSGEVESLRKSRSASCTPVIKRCAAGGR 300

Query: 301 PSSLGGKNGTKSRSNVTVNKDASSA----------QPSHSGNQKKRGADDISNLGTPRLF 360
              + GKN  +   N+TV K+ S++          + S S  +KK  A  IS   TP+LF
Sbjct: 301 TYVMSGKNSGRDPCNITVKKENSASHVPDLQKENEKGSRSSKRKKEDAKPISE--TPKLF 357

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BLAST of Cla020841 vs. TrEMBL
Match: A0A0D2TW23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G270000 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 161/370 (43.51%), Postives = 241/370 (65.14%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           MG    S+ S ER+ W KIF GL +ML+TQQ QLETL  ERK+LEDRIKMQ+ERW++D+R
Sbjct: 1   MGAKTRSEGSSERQKWDKIFEGLVKMLKTQQQQLETLSKERKILEDRIKMQYERWVSDVR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           LYEDHISQMK  L  +++ R L+ +K+D++ G+K  E YLC++K+E +E EL DF+ +FD
Sbjct: 61  LYEDHISQMKSGLESEEIARVLEATKADMMVGLKHREAYLCKMKLEEAEDELTDFRIWFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNTDEARRSKALEGEVRRLRCEYEK 180
            L      N +D S R + E  +    R+   S      ++   +ALE ++RRL+ +Y+ 
Sbjct: 121 IL----GKNSKDISQRDSIETKKGTSARKRSGS------KSVTLEALEDDIRRLQLQYKN 180

Query: 181 LASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQS 240
           L SEKS +V+ALVAE KF WNQ+N ++  ++  L TKQ EL++A+ ++E L++ +E+L+S
Sbjct: 181 LVSEKSCQVTALVAENKFAWNQFNALESRYTDNLNTKQSELDKANKRIEALMSDMEELRS 240

Query: 241 SNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTR 300
           S  EKD +I  L+ ++ + + D+ + + ++S+ S ++E  RKS +A+ TPV+  C AG R
Sbjct: 241 SIAEKDEIIERLKAELSRKKADASRFQ-QVSKTSGDVESLRKSRSASCTPVIKRCAAGGR 300

Query: 301 PSSLGGKNGTKSRSNVTVNKDAS----------SAQPSHSGNQKKRGADDISNLGTPRLF 360
              +GGKN  +   N+TV K+ S          + + S S  +KK  A  IS   TP+LF
Sbjct: 301 TYVMGGKNSGRDPCNITVKKENSAPHVPDIQKENEKGSRSSKRKKEDAKPISE--TPKLF 357

[Close]

BLAST of Cla020841 vs. NCBI nr
Match: gi|449437422|ref|XP_004136491.1| (PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus])

HSP 1 Score: 593.6 bits (1529), Expect = 2.4e-166
Identity = 300/365 (82.19%), Postives = 327/365 (89.59%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           MGKSD S+ SIERRNWGKIFNGLTQML+TQQNQLETLV ERKLLEDR+KMQHERW+ADIR
Sbjct: 1   MGKSDRSKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           LYEDH+SQM+D+L LQDMERS Q SKSDLL GMKQ+ELY+CRLKIEHSEAELEDFKSFFD
Sbjct: 61  LYEDHVSQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNTDEARRSKALEGEVRRLRCEYEK 180
           D I+H+NS  Q+S LRSASEPA+ANGG E G+S  GNTDE RRS+ALE EVRR R EYEK
Sbjct: 121 DFIAHKNSKLQESFLRSASEPAEANGGGEGGMSKFGNTDEVRRSEALESEVRRFRSEYEK 180

Query: 181 LASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQS 240
           LASEKS EVSALV E KFVWNQYNVI+ D+SSKL+ K  ELERAHLKVE+LLATLEQLQS
Sbjct: 181 LASEKSSEVSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQS 240

Query: 241 SNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTR 300
           SNNEKD VIA LRNQ+GKMETDS KLKDEISRLSH+LE+QRKS+NATATPVL PCKAG R
Sbjct: 241 SNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPCKAGLR 300

Query: 301 PSSLGGKNGTKSRSNVTVNKDASSAQPSHSGNQKKRGADDISNLGTPRLFTSSFKVPKLK 360
            S LGGKNG++SRSNV VNKDA SAQPSHSGNQ KRGA DIS+ GTPRLFTSSFKVPKLK
Sbjct: 301 TSGLGGKNGSRSRSNVIVNKDAYSAQPSHSGNQMKRGAGDISDPGTPRLFTSSFKVPKLK 360

Query: 361 NELNL 366
           NE+NL
Sbjct: 361 NEINL 365

[Close]

BLAST of Cla020841 vs. NCBI nr
Match: gi|659132965|ref|XP_008466482.1| (PREDICTED: paramyosin [Cucumis melo])

HSP 1 Score: 582.4 bits (1500), Expect = 5.5e-163
Identity = 299/365 (81.92%), Postives = 331/365 (90.68%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           MGK+D S+ASIER+NWGKIFNGLTQML+TQQNQLETLV ERKLLEDR+KMQHERW+ADIR
Sbjct: 1   MGKTDRSKASIERQNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           LYEDHISQ++D+LLL DMERSLQ SKSDLL+GMKQ+ELY+CRLKIE SEAE EDFKS FD
Sbjct: 61  LYEDHISQLRDELLLLDMERSLQASKSDLLSGMKQTELYVCRLKIEQSEAEFEDFKSVFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNTDEARRSKALEGEVRRLRCEYEK 180
           D I+H+NSN Q+S LRSASEPA+ANGGRE  LS  GNTDE RRSKALE EVRRLR EYEK
Sbjct: 121 DFIAHKNSNLQESFLRSASEPAEANGGREGVLSTFGNTDEVRRSKALEKEVRRLRSEYEK 180

Query: 181 LASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQS 240
           LASEKS EVSALV EKKFVW+QYNVI+ D+SSKL+ KQ ELE A LKVE+LLATLEQLQ+
Sbjct: 181 LASEKSSEVSALVTEKKFVWHQYNVIEADYSSKLKNKQSELEHARLKVEELLATLEQLQN 240

Query: 241 SNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTR 300
           SN+EKD VIATL+NQ+GKMETDSCKLKDEISRLS++LE+QRKS+N TATPVL PCKA TR
Sbjct: 241 SNDEKDDVIATLQNQVGKMETDSCKLKDEISRLSNDLEVQRKSVNPTATPVLKPCKA-TR 300

Query: 301 PSSLGGKNGTKSRSNVTVNKDASSAQPSHSGNQKKRGADDISNLGTPRLFTSSFKVPKLK 360
            S LG KN +KSRSNVTVNKD SSAQPSHSGNQKKRGADDIS+ GTPRLFTSSFKVPKLK
Sbjct: 301 SSGLGVKNVSKSRSNVTVNKDVSSAQPSHSGNQKKRGADDISDPGTPRLFTSSFKVPKLK 360

Query: 361 NELNL 366
           NE+NL
Sbjct: 361 NEINL 364

[Close]

BLAST of Cla020841 vs. NCBI nr
Match: gi|596299046|ref|XP_007227591.1| (hypothetical protein PRUPE_ppa016441mg [Prunus persica])

HSP 1 Score: 334.3 bits (856), Expect = 2.6e-88
Identity = 185/376 (49.20%), Postives = 253/376 (67.29%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           M   + S+AS + +NW   FNGL QM++ QQ+QLETL  +R+LLEDR++ Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQSQNWQNTFNGLVQMIRDQQSQLETLAKDRQLLEDRVRTQNERWTYDIR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           L ED ISQMK DL  Q++  SLQ +K +L+ G+KQ E YL +LK+E++++ELE FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNT-------DEARRSKALEGEVRR 180
                             ++ +   GG E G     NT        E +RSK LE ++RR
Sbjct: 121 ----------------LYNKFSDLKGGGEDGDKRISNTKSPKKSKQEKQRSKQLEDDLRR 180

Query: 181 LRCEYEKLASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLA 240
           L  +Y+KLASEKS EVSAL+AEKKFVWNQY ++++++++KL +K  E+E+A  K++  LA
Sbjct: 181 LNQQYDKLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEAKIQNFLA 240

Query: 241 TLEQLQSSNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLN 300
            +E LQSSN EKDG IA L +++ KME+DS KLK+EIS+LS  L+L RKS +A++TP+LN
Sbjct: 241 HMEHLQSSNKEKDGKIAILISKVAKMESDSNKLKEEISKLSTELDLLRKSTSASSTPLLN 300

Query: 301 PCKAGTRPSSLGGKNGTKSRSNVTVNKDASSAQ------PSHSGNQ-KKRGADDISNLG- 360
            C AGTR  SL G N  K R+NVTV KD+S+AQ       +  G+   KR  DD+  +  
Sbjct: 301 HCTAGTRTCSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISE 360

Query: 361 TPRLFTSSFKVPKLKN 362
           TP+LF+S FKVPKLKN
Sbjct: 361 TPKLFSSRFKVPKLKN 360

[Close]

BLAST of Cla020841 vs. NCBI nr
Match: gi|645229002|ref|XP_008221258.1| (PREDICTED: nuclear distribution protein nudE homolog 1 [Prunus mume])

HSP 1 Score: 332.8 bits (852), Expect = 7.6e-88
Identity = 182/376 (48.40%), Postives = 255/376 (67.82%), Query Frame = 1


Query: 1   MGKSDTSQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIR 60
           M   + S+AS +R+NW   F+GL QM++ QQ+QLETL  +R+LLEDR+++Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQRQNWQNTFSGLVQMIRYQQSQLETLAKDRQLLEDRVRIQNERWTYDIR 60

Query: 61  LYEDHISQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFD 120
           L ED ISQMK DL  Q++  SLQ +K +L+ G+KQ E YL +LK+E++++ELE FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLISHRNSNPQDSSLRSASEPAQANGGRESGLSACGNT-------DEARRSKALEGEVRR 180
                             ++ +   GG E G     NT        E +RSK LE ++RR
Sbjct: 121 ----------------LYNKFSDLKGGGEDGDKRISNTKSPKKSKQEKQRSKQLEDDLRR 180

Query: 181 LRCEYEKLASEKSLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLA 240
           L+ +Y+KLASEKS EVSAL+AEKKFVWNQY ++++++++KL +K  E+E+A   ++  LA
Sbjct: 181 LKQQYDKLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEANIQNFLA 240

Query: 241 TLEQLQSSNNEKDGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLN 300
            +E LQSSN EKDG +A L +++ KME+DS KLK+E+S+LS  L+L RKS +A++TP+LN
Sbjct: 241 HMEHLQSSNKEKDGKVAILISKIAKMESDSNKLKEEVSKLSTELDLLRKSTSASSTPLLN 300

Query: 301 PCKAGTRPSSLGGKNGTKSRSNVTVNKDASSAQ------PSHSGNQ-KKRGADDISNLG- 360
            C AGTR  SL G N  K R+NVTV KD+S+AQ       +  G+   KR  DD+  +  
Sbjct: 301 HCTAGTRTYSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISE 360

Query: 361 TPRLFTSSFKVPKLKN 362
           TP+LF+S FKVPKLKN
Sbjct: 361 TPKLFSSRFKVPKLKN 360

[Close]

BLAST of Cla020841 vs. NCBI nr
Match: gi|590594269|ref|XP_007017804.1| (Cytomatrix protein-related, putative [Theobroma cacao])

HSP 1 Score: 325.1 bits (832), Expect = 1.6e-85
Identity = 172/363 (47.38%), Postives = 250/363 (68.87%), Query Frame = 1


Query: 7   SQASIERRNWGKIFNGLTQMLQTQQNQLETLVNERKLLEDRIKMQHERWIADIRLYEDHI 66
           SQ S ER+NW KIF GL +ML+TQQ QLETL  ERK+LEDRIKMQ+ERW++D+RLYEDHI
Sbjct: 7   SQVSSERQNWDKIFEGLVEMLKTQQEQLETLAKERKILEDRIKMQYERWVSDVRLYEDHI 66

Query: 67  SQMKDDLLLQDMERSLQTSKSDLLTGMKQSELYLCRLKIEHSEAELEDFKSFFDDLISHR 126
           SQ+K D+  ++M R+L+ +K+DL+ G+K  E YLC+LK+E +E EL DF+ +FD L    
Sbjct: 67  SQVKSDMESKEMARALEAAKADLMVGLKHRETYLCKLKLEETEDELTDFRIWFDIL---- 126

Query: 127 NSNPQDSSLRSASEPAQANGGRESGLSACGNT-DEARRSKALEGEVRRLRCEYEKLASEK 186
           + N +D S R   E        + G+S C ++  ++   + LEG+VRRL+ +YE LASEK
Sbjct: 127 SKNSKDISQRDPEE-------TKRGMSGCKDSGSKSVTVRTLEGDVRRLKLKYENLASEK 186

Query: 187 SLEVSALVAEKKFVWNQYNVIQDDFSSKLETKQLELERAHLKVEKLLATLEQLQSSNNEK 246
           + +++AL+AE KF WNQ+NV++  ++ KL +K  ELE+A+ K+E L++ +E+L SSN EK
Sbjct: 187 NSQITALLAENKFAWNQFNVLETQYTDKLNSKDSELEKANRKIEALISNMEELNSSNAEK 246

Query: 247 DGVIATLRNQMGKMETDSCKLKDEISRLSHNLELQRKSMNATATPVLNPCKAGTRPSSLG 306
           D +I  L+ ++ + E ++ K   E+S+ S  +EL RKS NA+ TPV+  C AG R S LG
Sbjct: 247 DAIIERLKAEVSQKEANASKF-HEVSKKSREVELLRKSRNASCTPVIKRCSAGGRTSVLG 306

Query: 307 GKNGTKSRSNVTVNKDASS------AQPSHSGNQ-KKRGADDISNLG-TPRLFTSSFKVP 361
           GK+G +   NV V K+ S+       + S  G++  KR  DD++ +  TP+LFTS+FKVP
Sbjct: 307 GKHGGRDGGNVIVKKETSARNDPDLLKDSGKGSRSSKRKKDDVTPISETPKLFTSTFKVP 357

The following BLAST results are available for this feature:

BLAST of Cla020841 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH58_CUCSA	1.7e-166	82.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872190 PE=4 SV=1	[more]
M5Y9L9_PRUPE	1.8e-88	49.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016441mg PE=4 SV=1	[more]
A0A061FKJ5_THECC	1.1e-85	47.38	Cytomatrix protein-related, putative OS=Theobroma cacao GN=TCM_034227 PE=4 SV=1	[more]
A0A0B0PTE6_GOSAR	4.8e-81	44.86	Keratin, type II cytoskeletal 8 OS=Gossypium arboreum GN=F383_13705 PE=4 SV=1	[more]
A0A0D2TW23_GOSRA	1.3e-78	43.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G270000 PE=4 SV=1	[more]

BLAST of Cla020841 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437422\|ref\|XP_004136491.1\|	2.4e-166	82.19	PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus]	[more]
gi\|659132965\|ref\|XP_008466482.1\|	5.5e-163	81.92	PREDICTED: paramyosin [Cucumis melo]	[more]
gi\|596299046\|ref\|XP_007227591.1\|	2.6e-88	49.20	hypothetical protein PRUPE_ppa016441mg [Prunus persica]	[more]
gi\|645229002\|ref\|XP_008221258.1\|	7.6e-88	48.40	PREDICTED: nuclear distribution protein nudE homolog 1 [Prunus mume]	[more]
gi\|590594269\|ref\|XP_007017804.1\|	1.6e-85	47.38	Cytomatrix protein-related, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU48111	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla020841	Cla020841.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU48111	WMU48111	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 20..54 score: -coord: 164..184 score: -coord: 214..255 scor
None	No IPR available	PANTHER	PTHR35992	FAMILY NOT NAMED	coord: 1..364 score: 8.7
None	No IPR available	PANTHER	PTHR35992:SF1	CYTOMATRIX PROTEIN-LIKE PROTEIN	coord: 1..364 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla020841	Cla97C08G157850	Watermelon (97103) v2	wmwmbB222
Cla020841	Cla97C05G099580	Watermelon (97103) v2	wmwmbB207
Cla020841	Csa3G872190	Cucumber (Chinese Long) v2	cuwmB244
Cla020841	Csa2G368790	Cucumber (Chinese Long) v2	cuwmB126
Cla020841	MELO3C003750	Melon (DHL92) v3.5.1	mewmB368
Cla020841	MELO3C011012	Melon (DHL92) v3.5.1	mewmB317
Cla020841	ClCG05G018260	Watermelon (Charleston Gray)	wcgwmB285
Cla020841	ClCG08G014280	Watermelon (Charleston Gray)	wcgwmB412
Cla020841	CSPI02G20860	Wild cucumber (PI 183967)	cpiwmB129
Cla020841	CSPI03G43430	Wild cucumber (PI 183967)	cpiwmB243
Cla020841	Cucsa.159900	Cucumber (Gy14) v1	cgywmB294
Cla020841	Cucsa.343050	Cucumber (Gy14) v1	cgywmB615
Cla020841	CmaCh01G019730	Cucurbita maxima (Rimu)	cmawmB440
Cla020841	CmaCh05G003060	Cucurbita maxima (Rimu)	cmawmB759
Cla020841	CmoCh05G003090	Cucurbita moschata (Rifu)	cmowmB753
Cla020841	CmoCh01G020310	Cucurbita moschata (Rifu)	cmowmB434
Cla020841	Lsi08G013180	Bottle gourd (USVL1VR-Ls)	lsiwmB481
Cla020841	Cp4.1LG02g07920	Cucurbita pepo (Zucchini)	cpewmB559
Cla020841	Cp4.1LG11g02430	Cucurbita pepo (Zucchini)	cpewmB109
Cla020841	CsGy3G040980	Cucumber (Gy14) v2	cgybwmB230
Cla020841	MELO3C003750.2	Melon (DHL92) v3.6.1	medwmB364
Cla020841	MELO3C011012.2	Melon (DHL92) v3.6.1	medwmB311
Cla020841	Carg17199	Silver-seed gourd	carwmB0945
Cla020841	CsaV3_3G045880	Cucumber (Chinese Long) v3	cucwmB253
Cla020841	CsaV3_2G029530	Cucumber (Chinese Long) v3	cucwmB138
Cla020841	Bhi04G000128	Wax gourd	wgowmB334
Cla020841	Bhi09G001784	Wax gourd	wgowmB618

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla020841	Cla022423	Watermelon (97103) v1	wmwmB059

The following block(s) are covering this gene:


Gene	Organism	Block
Cla020841	Watermelon (97103) v1	wmwmB127
Cla020841	Cucumber (Gy14) v1	cgywmB025
Cla020841	Cucurbita maxima (Rimu)	cmawmB026
Cla020841	Cucurbita maxima (Rimu)	cmawmB159
Cla020841	Cucurbita moschata (Rifu)	cmowmB018
Cla020841	Cucurbita moschata (Rifu)	cmowmB145
Cla020841	Melon (DHL92) v3.5.1	mewmB569
Cla020841	Cucumber (Chinese Long) v2	cuwmB496
Cla020841	Cucurbita pepo (Zucchini)	cpewmB765
Cla020841	Cucurbita pepo (Zucchini)	cpewmB795
Cla020841	Bottle gourd (USVL1VR-Ls)	lsiwmB140
Cla020841	Bottle gourd (USVL1VR-Ls)	lsiwmB316
Cla020841	Cucumber (Gy14) v2	cgybwmB120
Cla020841	Silver-seed gourd	carwmB0102
Cla020841	Silver-seed gourd	carwmB0135
Cla020841	Silver-seed gourd	carwmB0981
Cla020841	Cucumber (Chinese Long) v3	cucwmB521