Cp4.1LG02g07920.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g07920.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Cytomatrix protein-related, putative
Location	Cp4.1LG02 : 362176 .. 365414 (-)
Sequence length	2127

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTTCCGAATTCAATTTTCAAGTTCTCATTTTTCAACCATTCGTCCCAAAAGTCGACCGTTGCCAATCTCCATTCAACGGTCATTTTGTTCTTCATCGAACATTGTCGCTTGTTTTCTTGTTTCCTGTTCAGTGGATCGGAATGGGAAAGAGCAATGGATCACAAGTTTCGAATGAACGGCGAAATTGGGGCAAAATCTTCAATGCTCTTACTCAAATGCTACAGACCCAGCAAAATCAGCTCGAAACACTCGTCAAGGAGCGAAAACTTCTTGAAGATCGTGTTAAAATGCAGCACGAACGATGGGTCACTGATATTCGTCTTTACGACGACCATATCTCTCAGGTGATTTGTTTTACCTCTGCGATTTAGTGGATTTTTTAGTTTAATTATGGAATTGGAACTTCCCCCTTTCCTCTGAATTCTAGGGTTTCTAATGAACTTCGGAATTTTTTTCTTGTTCAGATGAAGAACGATTTGTTTGTGCAAGATATGGAACGCGCACTTCAAGCTTCAAAATCAGATCTGCTCACTGGATTGAAGCAGATGGAGGTCTATCTCTACCGACTGAAAATAGGTTTTTGTTTTTTCCCCCTCTTAAATCTGTTGAAGTTATGAATAATCGATCATTCAAAGAAGGAAATTCATGATGCCTCATAGGGTAGGCATTCTTACATAATATGTCACGTTCGGCAATGTTCCTTTCTCTCGGCTCTTTACTTCAATTTCGAGCACTCTTGTTTACACTAGTACGACAGCAATTAAGTTACTGTGACAATAATTTGGTCATTGAAGAGGGATTGGGACGAGGCCTTTTGGGGAAACCAAAAGCAAAGTCACCAGAACTTATGCTCAAAGTGGACAATATTGGACAATATCATACCATGGTGGAGAGTCTGGTTCCTAACATGGTATCAAAGCCATTAGCCATGTCAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGTCTCGAAAGTGTAGTCAATAGTGACTCAAGTGTCGAACAAAAAGTGTGCTTTGTTCGAGGGCTCCTAAGAAAAGAGTCAAGCCTTGATTAAGGGGAGATTGTTCGAGGGCTCCATAAGACTCAGGGGAGGCTCTATGGTGTGCTTTGTTCGAGGGGAGGATTGTTGAGGATTATTGGGAAAGGTGTCCCACATCAACTAATTAAGGGGTTGATCATGGGACACCTTTATTACTATCGTGAGAATCGTGGTTCCTAACAGTTATAATAGCTTCATAAATTTTGGTTGATGTGTGTTTTACTGTAGGACTAAGATGATGTAAATCTTGATATGCTTGGCAAAATTGGGACTCTCTGATCTGACAAATACTATACTTGCTTATGTTTACCAAATGCAGAACATTCAGAAGCTGAGTTGGACGATTTCAAATCTTTTTTTGATGATCTCCTCTTTCATAAAAGCTCCAGTCCACAAGTATGGTTCCTGGAATTCTGCGTGATTTTGGTTAGGTATCAGGACATGTTCTAATCTTCTGTCTCTGGCTGCAGGAAACTTCTTTGAGAAGTTCATCAGAAGCAGGCGAGGCAAATGGTAGAATAGAAGGTGTTTTGTTGTCAGCATGTGGAAATACTGATGAAGAAAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGAGTGAGTACGAAAAGCTAGTAACTGAGAAGAAATTCTTATGGAACCAATATAATCTTATGGAAAATGATTGCACAAGAAAATTGAAGAGCAAGCAGTCAGAACTTGAACTTGCAAACCAAAAGATAGAGAAACTTCTAGCCTCATTGGAAGAATTACAAAGTTCAAGCAATGAGAAGGATGGCATTATTGCAATGTTACAAACCCAAGTGGGGAAGATGGAAACTGACTCGAGTAAACTAAAACACGAAATTTCCCGACTCTCCCGTGACTTAGAACTGCAAAGGAAGTCTTTTAATGCTAATGCTACACCCGTGCTGAACCCATGCAACAAGGCAGGAACTAAGGCATTTAGCTCAGGAGGCAAAAACGGCACAAAGAACAGAAGTAACGTCATTGTCAACAAAGTCATGCTTTCGGCGCAACCTTCTCATTCAGTAAGTATACTATGATAATATGTGTTCTGATTTTGAACATTTTTCCTATTTATGGTTGATTTTTCGTGTTTAAATCGAGTATCGTGGATAAGTCGATCTAGGGATAAGTTGATTTTTTGCGGTGGCCAGGGAAACCAAAAGAGAAGAAGAGGTGATGCTAATTCAGATCCTGAGACTCCAAGGTTGTTTACCTCTAATTTCAAAGTACCCAAACTGAAGAAGGAAATCAAGTTGTAGATTGCCTAGAATGTTTGTGGCCTCAATTGGGTTTGGCTCTTGATTGTTGTATTTTCTTTCACCTGTGTGTTAATATTAGTGTATTATTGTTGTACCTGAAAATATTAGTGTCAGCCATTACTTATCCAATGTAATCTATCTGATTTAGAATTTAGAAATCTCTGTTTCAGGAGGCTTTTGACGCAGAATTGTAAAGATATTGTGGGAATATCAACAATATATTTTACATCAAAGTACTTGTTCCTATCCTTTGCTATTCTATGATGCATCTATGTCATAGTTAAGATGCAGGTGACCACTTGGAGAGGAATTAACGGCGGGTCCACAGCAATATCAGCAGCAGAAACAGCAACACCGCTGCGCCCCAAGGTGAGGTCTTTTCGGCCTCCTGAGCTGACCTGTTCTTGGTTCTCATGGCAGTTGACGCAACCGAACCAGACACAAGAAGGGAATTTGCAATAAAGATGAGCAAAAATGGCAAAGCTAGTAGGAAGAGCTTGAAGTCGAATGCCATCTCCTGGGACTGCAACGAAAGCAAAAGAAGGACGACGCCGAGAAAGGCGAGAAGAGGCATAGGCGGGAGAGACATGGAAGCCATTGTTCTCTCTGCCCATCCATACTTCCACTCTGGAACTCTTTCTTCCTCTGCCCAACTCATGGTGTCTTCAGGTTAGAAGCTTTTCTCTTACTGTTTTGGTGTAACAATCTGCAAAACAAACACAGAATGTTCCTTTATAAGTAAACTCCCAACCGACCTCTTTCCTTAACCAGAGACCTTGGAAGATTTTATATGATATGTTTCAGACAGCTATGGATAAATATGATAAGGCGGCGGTTAGGTCTGTTTTTTTGTTTGTTGTTTTGCATTCAGAAATGAGCACTTGGAGGCCATGCAATGGACCTTAGAAAATT

mRNA sequence

TTCCCTTCCGAATTCAATTTTCAAGTTCTCATTTTTCAACCATTCGTCCCAAAAGTCGACCGTTGCCAATCTCCATTCAACGGTCATTTTGTTCTTCATCGAACATTGTCGCTTGTTTTCTTGTTTCCTGTTCAGTGGATCGGAATGGGAAAGAGCAATGGATCACAAGTTTCGAATGAACGGCGAAATTGGGGCAAAATCTTCAATGCTCTTACTCAAATGCTACAGACCCAGCAAAATCAGCTCGAAACACTCGTCAAGGAGCGAAAACTTCTTGAAGATCGTGTTAAAATGCAGCACGAACGATGGGTCACTGATATTCGTCTTTACGACGACCATATCTCTCAGATGAAGAACGATTTGTTTGTGCAAGATATGGAACGCGCACTTCAAGCTTCAAAATCAGATCTGCTCACTGGATTGAAGCAGATGGAGGTCTATCTCTACCGACTGAAAATAGAACATTCAGAAGCTGAGTTGGACGATTTCAAATCTTTTTTTGATGATCTCCTCTTTCATAAAAGCTCCAGTCCACAAGAAACTTCTTTGAGAAGTTCATCAGAAGCAGGCGAGGCAAATGGTAGAATAGAAGGTGTTTTGTTGTCAGCATGTGGAAATACTGATGAAGAAAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGAGTGAGTACGAAAAGCTAGTAACTGAGAAGAAATTCTTATGGAACCAATATAATCTTATGGAAAATGATTGCACAAGAAAATTGAAGAGCAAGCAGTCAGAACTTGAACTTGCAAACCAAAAGATAGAGAAACTTCTAGCCTCATTGGAAGAATTACAAAGTTCAAGCAATGAGAAGGATGGCATTATTGCAATGTTACAAACCCAAGTGGGGAAGATGGAAACTGACTCGAGTAAACTAAAACACGAAATTTCCCGACTCTCCCGTGACTTAGAACTGCAAAGGAAGTCTTTTAATGCTAATGCTACACCCGTGCTGAACCCATGCAACAAGGCAGGAACTAAGGCATTTAGCTCAGGAGGCAAAAACGGCACAAAGAACAGAAGTAACGTCATTGTCAACAAAGTCATGCTTTCGGCGCAACCTTCTCATTCAGGAAACCAAAAGAGAAGAAGAGGTGATGCTAATTCAGATCCTGAGACTCCAAGGTTGTTTACCTCTAATTTCAAAGTACCCAAACTGAAGAAGGAAATCAAGTTGTAGATTGCCTAGAATGTTTGTGGCCTCAATTGGGTTTGGCTCTTGATTGTTGTATTTTCTTTCACCTGTGTGTTAATATTAGTGTATTATTGTTGTACCTGAAAATATTAGTGTCAGCCATTACTTATCCAATGTAATCTATCTGATTTAGAATTTAGAAATCTCTGTTTCAGGAGGCTTTTGACGCAGAATTGTAAAGATATTGTGGGAATATCAACAATATATTTTACATCAAAGTACTTGTTCCTATCCTTTGCTATTCTATGATGCATCTATGTCATAGTTAAGATGCAGGTGACCACTTGGAGAGGAATTAACGGCGGGTCCACAGCAATATCAGCAGCAGAAACAGCAACACCGCTGCGCCCCAAGGTGAGGTCTTTTCGGCCTCCTGAGCTGACCTGTTCTTGGTTCTCATGGCAGTTGACGCAACCGAACCAGACACAAGAAGGGAATTTGCAATAAAGATGAGCAAAAATGGCAAAGCTAGTAGGAAGAGCTTGAAGTCGAATGCCATCTCCTGGGACTGCAACGAAAGCAAAAGAAGGACGACGCCGAGAAAGGCGAGAAGAGGCATAGGCGGGAGAGACATGGAAGCCATTGTTCTCTCTGCCCATCCATACTTCCACTCTGGAACTCTTTCTTCCTCTGCCCAACTCATGGTGTCTTCAGGTTAGAAGCTTTTCTCTTACTGTTTTGGTGTAACAATCTGCAAAACAAACACAGAATGTTCCTTTATAAGTAAACTCCCAACCGACCTCTTTCCTTAACCAGAGACCTTGGAAGATTTTATATGATATGTTTCAGACAGCTATGGATAAATATGATAAGGCGGCGGTTAGGTCTGTTTTTTTGTTTGTTGTTTTGCATTCAGAAATGAGCACTTGGAGGCCATGCAATGGACCTTAGAAAATT

Coding sequence (CDS)

ATGGGAAAGAGCAATGGATCACAAGTTTCGAATGAACGGCGAAATTGGGGCAAAATCTTCAATGCTCTTACTCAAATGCTACAGACCCAGCAAAATCAGCTCGAAACACTCGTCAAGGAGCGAAAACTTCTTGAAGATCGTGTTAAAATGCAGCACGAACGATGGGTCACTGATATTCGTCTTTACGACGACCATATCTCTCAGATGAAGAACGATTTGTTTGTGCAAGATATGGAACGCGCACTTCAAGCTTCAAAATCAGATCTGCTCACTGGATTGAAGCAGATGGAGGTCTATCTCTACCGACTGAAAATAGAACATTCAGAAGCTGAGTTGGACGATTTCAAATCTTTTTTTGATGATCTCCTCTTTCATAAAAGCTCCAGTCCACAAGAAACTTCTTTGAGAAGTTCATCAGAAGCAGGCGAGGCAAATGGTAGAATAGAAGGTGTTTTGTTGTCAGCATGTGGAAATACTGATGAAGAAAGACGTTCTAAGGCATTGGAAGGTGAAGTAAGGAGGTTGAGGAGTGAGTACGAAAAGCTAGTAACTGAGAAGAAATTCTTATGGAACCAATATAATCTTATGGAAAATGATTGCACAAGAAAATTGAAGAGCAAGCAGTCAGAACTTGAACTTGCAAACCAAAAGATAGAGAAACTTCTAGCCTCATTGGAAGAATTACAAAGTTCAAGCAATGAGAAGGATGGCATTATTGCAATGTTACAAACCCAAGTGGGGAAGATGGAAACTGACTCGAGTAAACTAAAACACGAAATTTCCCGACTCTCCCGTGACTTAGAACTGCAAAGGAAGTCTTTTAATGCTAATGCTACACCCGTGCTGAACCCATGCAACAAGGCAGGAACTAAGGCATTTAGCTCAGGAGGCAAAAACGGCACAAAGAACAGAAGTAACGTCATTGTCAACAAAGTCATGCTTTCGGCGCAACCTTCTCATTCAGGAAACCAAAAGAGAAGAAGAGGTGATGCTAATTCAGATCCTGAGACTCCAAGGTTGTTTACCTCTAATTTCAAAGTACCCAAACTGAAGAAGGAAATCAAGTTGTAG

Protein sequence

MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYEKLVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPKLKKEIKL

Homology

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BLAST of Cp4.1LG02g07920.1 vs. TrEMBL
Match: A0A0A0LH58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872190 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 2.1e-126
Identity = 257/367 (70.03%), Postives = 297/367 (80.93%), Query Frame = 1


Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           MGKS+ S+ S ERRNWGKIFN LTQML+TQQNQLETLV ERKLLEDRVKMQHERWV DIR
Sbjct: 1   MGKSDRSKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           LY+DH+SQM+++LF+QDMER+ QASKSDLL G+KQ E+Y+ RLKIEHSEAEL+DFKSFFD
Sbjct: 61  LYEDHVSQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D + HK+S  QE+ LRS+SE  EANG  EG  +S  GNTDE RRS+ALE EVRR RSEYE
Sbjct: 121 DFIAHKNSKLQESFLRSASEPAEANGGGEGG-MSKFGNTDEVRRSEALESEVRRFRSEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           LVTE KF+WNQYN++E D + KLK+K SELE A+ K+E+LLA+LE+LQ
Sbjct: 181 KLASEKSSEVSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+NEKD +IAML+ QVGKMETDS KLK EISRLS DLE+QRKS NA ATPVL PC KAG
Sbjct: 241 SSNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPC-KAG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPK 357
            +    GGKNG+++RSNVIVNK   SAQPSHSGNQ +R     SDP TPRLFTS+FKVPK
Sbjct: 301 LRTSGLGGKNGSRSRSNVIVNKDAYSAQPSHSGNQMKRGAGDISDPGTPRLFTSSFKVPK 360

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BLAST of Cp4.1LG02g07920.1 vs. TrEMBL
Match: A0A061FKJ5_THECC (Cytomatrix protein-related, putative OS=Theobroma cacao GN=TCM_034227 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73
Identity = 173/365 (47.40%), Postives = 241/365 (66.03%), Query Frame = 1


Query: 7   SQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHI 66
           SQVS+ER+NW KIF  L +ML+TQQ QLETL KERK+LEDR+KMQ+ERWV+D+RLY+DHI
Sbjct: 7   SQVSSERQNWDKIFEGLVEMLKTQQEQLETLAKERKILEDRIKMQYERWVSDVRLYEDHI 66

Query: 67  SQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHK 126
           SQ+K+D+  ++M RAL+A+K+DL+ GLK  E YL +LK+E +E EL DF+ +FD L    
Sbjct: 67  SQVKSDMESKEMARALEAAKADLMVGLKHRETYLCKLKLEETEDELTDFRIWFDIL---- 126

Query: 127 SSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRS-KALEGEVRRLRSEYEKLVTE 186
           S + ++ S R   E            +S C ++  +  + + LEG+VRRL+ +YE L +E
Sbjct: 127 SKNSKDISQRDPEETKRG--------MSGCKDSGSKSVTVRTLEGDVRRLKLKYENLASE 186

Query: 187 K-----------KFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNE 246
           K           KF WNQ+N++E   T KL SK SELE AN+KIE L++++EEL SS+ E
Sbjct: 187 KNSQITALLAENKFAWNQFNVLETQYTDKLNSKDSELEKANRKIEALISNMEELNSSNAE 246

Query: 247 KDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFS 306
           KD II  L+ +V + E ++SK  HE+S+ SR++EL RKS NA+ TPV+  C+ AG +   
Sbjct: 247 KDAIIERLKAEVSQKEANASKF-HEVSKKSREVELLRKSRNASCTPVIKRCS-AGGRTSV 306

Query: 307 SGGKNGTKNRSNVIVNKV--------MLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFK 352
            GGK+G ++  NVIV K         +L      S + KR++ D     ETP+LFTS FK
Sbjct: 307 LGGKHGGRDGGNVIVKKETSARNDPDLLKDSGKGSRSSKRKKDDVTPISETPKLFTSTFK 357

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BLAST of Cp4.1LG02g07920.1 vs. TrEMBL
Match: M5Y9L9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016441mg PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.2e-70
Identity = 175/370 (47.30%), Postives = 241/370 (65.14%), Query Frame = 1


Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S+ S++ +NW   FN L QM++ QQ+QLETL K+R+LLEDRV+ Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQSQNWQNTFNGLVQMIRDQQSQLETLAKDRQLLEDRVRTQNERWTYDIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           L +D ISQMK DL  Q++  +LQA+K +L+ GLKQ E YL +LK+E++++EL+ FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
             L++K S      L+   E G+   RI     S   +  E++RSK LE ++RRL  +Y+
Sbjct: 121 --LYNKFS-----DLKGGGEDGDK--RISNT-KSPKKSKQEKQRSKQLEDDLRRLNQQYD 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           L+ EKKF+WNQY +ME + T KL+SK SE+E A  KI+  LA +E LQ
Sbjct: 181 KLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEAKIQNFLAHMEHLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+ EKDG IA+L ++V KME+DS+KLK EIS+LS +L+L RKS +A++TP+LN C  AG
Sbjct: 241 SSNKEKDGKIAILISKVAKMESDSNKLKEEISKLSTELDLLRKSTSASSTPLLNHCT-AG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQ--------PSHSGNQKRRRGDANSDPETPRLF 352
           T+  S  G N  K+R+NV V K   +AQ           S   KR+  D  +  ETP+LF
Sbjct: 301 TRTCSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISETPKLF 359

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BLAST of Cp4.1LG02g07920.1 vs. TrEMBL
Match: E0CQ59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14300 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.0e-64
Identity = 163/378 (43.12%), Postives = 228/378 (60.32%), Query Frame = 1


Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S VS++R+ W KIFNAL  MLQTQQ Q+E+L KERKLLEDR+K Q++RW++D+ 
Sbjct: 1   MAIDKDSHVSSDRQKWQKIFNALVHMLQTQQTQVESLAKERKLLEDRIKFQYDRWISDVH 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
              D I+QM+    VQ+ ER ++A+KSDLL GLK+ EV L +LK+E ++ EL DFK    
Sbjct: 61  SLQDQIAQMEMKFTVQEKERLVEAAKSDLLMGLKKREVSLCKLKLESTDDELVDFKVLI- 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D L H+   P   S     E G    R +  L S     +EE+ +K LEGEVR+L+ EYE
Sbjct: 121 DFLSHECLDPNGISKVGDKEKG---SRGDNNLKSVKTTKEEEQCAKRLEGEVRKLKWEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
                       L+ E+ F+WNQY +ME++ + KL SK  E+E AN+KI+ LL  +E+L+
Sbjct: 181 NLASRNSAEVSALLAEQNFVWNQYKIMESNYSNKLNSKHVEVEQANEKIDNLLVGMEQLE 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           S +NEKD  I  L+T + KMET++ K   EISRLS+++EL RKS +A+ TP+LN C +  
Sbjct: 241 SLNNEKDDKIVKLKTDLAKMETETKKKNEEISRLSKEVELLRKSRSASVTPILNRCTE-- 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQP----------SHSGNQKRRRGDANSD----- 352
            +  S  GKN +    N+ + K   +++           S    +K+ RG    +     
Sbjct: 301 KQKTSGQGKNKSWIGRNISIKKETPASEKNTEKKKESSVSEKNTEKKSRGSKRKEINVTP 360

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BLAST of Cp4.1LG02g07920.1 vs. TrEMBL
Match: B9GQV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02380g PE=4 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 1.0e-64
Identity = 170/369 (46.07%), Postives = 240/369 (65.04%), Query Frame = 1


Query: 1   MGKSNGSQV-SNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDI 60
           MG S  ++V +++R  W K+F  L ++L+ QQ QLETL+KERK+LEDR+K QHERWV+DI
Sbjct: 1   MGTSKRTKVVTSDREKWDKVFGGLVKLLKNQQEQLETLLKERKILEDRIKTQHERWVSDI 60

Query: 61  RLYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFF 120
           RLYDDHI Q+K  L  +DM   L+A+K DL+ GLKQ EV L++LK+E +E EL DF++ F
Sbjct: 61  RLYDDHILQIKGGLVEKDMACLLEAAKGDLMLGLKQREVSLHKLKLEQTEDELADFQALF 120

Query: 121 DDLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTD-EERRSKALEGEVRRLRSE 180
             L           SL+ +SE   ANG+         G++D +   +K LE EV RL+ E
Sbjct: 121 GYL---------SQSLKENSEE-TANGK-------GPGHSDLKSGEAKKLEAEVERLKLE 180

Query: 181 YEKLVTE-----------KKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEE 240
            EKLV E           K F+WNQY+++E++ T KL+ K++E+E AN+KI ++LA+ E 
Sbjct: 181 NEKLVFEKNSEVSALQKGKNFVWNQYDILESNLTNKLRIKEAEVEKANEKIAEVLATAEL 240

Query: 241 LQSSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNK 300
           LQSS++EK+ II  L T+V KME D+ K K E S+LSR+LEL RK   A  T V+ PC+ 
Sbjct: 241 LQSSNDEKNEIIQRLNTKVAKMEADTKKWKEETSKLSRELELLRKLRTAQITTVMKPCS- 300

Query: 301 AGTKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQ-----KRRRGDANSDPETPRLFT 352
           A  + F+SG K+  ++  N++  KV+ SA PS    +     K++R DA S  E PRLF+
Sbjct: 301 APVRTFTSGVKSCGRD-CNLVDRKVLQSAVPSKDAEKSIRSLKKKRMDA-SVFEAPRLFS 349

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BLAST of Cp4.1LG02g07920.1 vs. TAIR10
Match: AT1G19980.1 (AT1G19980.1 cytomatrix protein-related)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-51
Identity = 140/360 (38.89%), Postives = 209/360 (58.06%), Query Frame = 1


Query: 10  SNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHISQM 69
           S+ER NW  IF +L ++LQT+Q+QLE+L+K++K+LE  +K  +E W++D+R Y+D +S M
Sbjct: 10  SSERENWETIFKSLVKILQTKQDQLESLLKDKKILESEIKTNNENWLSDVRNYEDQLSLM 69

Query: 70  KNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHKSSS 129
             ++    M + L+  KS+LL GLK+ +  L  LK+EHS  EL DFK++FD L  +    
Sbjct: 70  MKEIETTKMFQLLETYKSNLLCGLKEKDRSLCNLKLEHSLDELKDFKAWFDFLTLN---- 129

Query: 130 PQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYEKLVTEKK-- 189
              T++ S S      G  EG  +            K+LE ++R+L+ EYEKL +EKK  
Sbjct: 130 ---TNVESVS------GNSEGTAI------------KSLEAKIRKLKLEYEKLASEKKCE 189

Query: 190 ---------FLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNEKDGI 249
                    F WNQ+  +E++ T KLK K  E+  AN KI  L++  E+LQSS+ EKD  
Sbjct: 190 VSDLLRENGFAWNQFKCIESEFTDKLKRKDDEIVQANTKISSLISYQEQLQSSNQEKDET 249

Query: 250 IAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFSSGGK 309
           I+ L+ ++ +MET+S+K   EIS+L+RDLE  +KS     TPVL  C K   ++      
Sbjct: 250 ISRLKAKMAEMETNSTKKDEEISKLTRDLESAKKS--RGFTPVLTRCTKLEKRS------ 309

Query: 310 NGTKNRSNVIVNKVMLSAQPSH---SGNQKRRRGDANSDP----ETPRLFTSNFKVPKLK 352
           NG    S++   K   +A  ++   S + KR+R   N  P    E P+LFTS F++PKLK
Sbjct: 310 NGNTVGSHISTKKDKSAASTTNEKVSKSSKRKRA-KNMTPVSVSEVPKLFTSTFRLPKLK 335

[Close]

BLAST of Cp4.1LG02g07920.1 vs. NCBI nr
Match: gi|449437422|ref|XP_004136491.1| (PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 3.1e-126
Identity = 257/367 (70.03%), Postives = 297/367 (80.93%), Query Frame = 1


Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           MGKS+ S+ S ERRNWGKIFN LTQML+TQQNQLETLV ERKLLEDRVKMQHERWV DIR
Sbjct: 1   MGKSDRSKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           LY+DH+SQM+++LF+QDMER+ QASKSDLL G+KQ E+Y+ RLKIEHSEAEL+DFKSFFD
Sbjct: 61  LYEDHVSQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D + HK+S  QE+ LRS+SE  EANG  EG  +S  GNTDE RRS+ALE EVRR RSEYE
Sbjct: 121 DFIAHKNSKLQESFLRSASEPAEANGGGEGG-MSKFGNTDEVRRSEALESEVRRFRSEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           LVTE KF+WNQYN++E D + KLK+K SELE A+ K+E+LLA+LE+LQ
Sbjct: 181 KLASEKSSEVSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+NEKD +IAML+ QVGKMETDS KLK EISRLS DLE+QRKS NA ATPVL PC KAG
Sbjct: 241 SSNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPC-KAG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPK 357
            +    GGKNG+++RSNVIVNK   SAQPSHSGNQ +R     SDP TPRLFTS+FKVPK
Sbjct: 301 LRTSGLGGKNGSRSRSNVIVNKDAYSAQPSHSGNQMKRGAGDISDPGTPRLFTSSFKVPK 360

[Close]

BLAST of Cp4.1LG02g07920.1 vs. NCBI nr
Match: gi|659132965|ref|XP_008466482.1| (PREDICTED: paramyosin [Cucumis melo])

HSP 1 Score: 444.1 bits (1141), Expect = 2.3e-121
Identity = 251/367 (68.39%), Postives = 295/367 (80.38%), Query Frame = 1


Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           MGK++ S+ S ER+NWGKIFN LTQML+TQQNQLETLV ERKLLEDRVKMQHERWV DIR
Sbjct: 1   MGKTDRSKASIERQNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           LY+DHISQ++++L + DMER+LQASKSDLL+G+KQ E+Y+ RLKIE SEAE +DFKS FD
Sbjct: 61  LYEDHISQLRDELLLLDMERSLQASKSDLLSGMKQTELYVCRLKIEQSEAEFEDFKSVFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
           D + HK+S+ QE+ LRS+SE  EANG  EGV LS  GNTDE RRSKALE EVRRLRSEYE
Sbjct: 121 DFIAHKNSNLQESFLRSASEPAEANGGREGV-LSTFGNTDEVRRSKALEKEVRRLRSEYE 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           LVTEKKF+W+QYN++E D + KLK+KQSELE A  K+E+LLA+LE+LQ
Sbjct: 181 KLASEKSSEVSALVTEKKFVWHQYNVIEADYSSKLKNKQSELEHARLKVEELLATLEQLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           +S++EKD +IA LQ QVGKMETDS KLK EISRLS DLE+QRKS N  ATPVL PC    
Sbjct: 241 NSNDEKDDVIATLQNQVGKMETDSCKLKDEISRLSNDLEVQRKSVNPTATPVLKPCK--A 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFKVPK 357
           T++   G KN +K+RSNV VNK + SAQPSHSGNQK+R  D  SDP TPRLFTS+FKVPK
Sbjct: 301 TRSSGLGVKNVSKSRSNVTVNKDVSSAQPSHSGNQKKRGADDISDPGTPRLFTSSFKVPK 360

[Close]

BLAST of Cp4.1LG02g07920.1 vs. NCBI nr
Match: gi|590594269|ref|XP_007017804.1| (Cytomatrix protein-related, putative [Theobroma cacao])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 173/365 (47.40%), Postives = 241/365 (66.03%), Query Frame = 1


Query: 7   SQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIRLYDDHI 66
           SQVS+ER+NW KIF  L +ML+TQQ QLETL KERK+LEDR+KMQ+ERWV+D+RLY+DHI
Sbjct: 7   SQVSSERQNWDKIFEGLVEMLKTQQEQLETLAKERKILEDRIKMQYERWVSDVRLYEDHI 66

Query: 67  SQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFDDLLFHK 126
           SQ+K+D+  ++M RAL+A+K+DL+ GLK  E YL +LK+E +E EL DF+ +FD L    
Sbjct: 67  SQVKSDMESKEMARALEAAKADLMVGLKHRETYLCKLKLEETEDELTDFRIWFDIL---- 126

Query: 127 SSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRS-KALEGEVRRLRSEYEKLVTE 186
           S + ++ S R   E            +S C ++  +  + + LEG+VRRL+ +YE L +E
Sbjct: 127 SKNSKDISQRDPEETKRG--------MSGCKDSGSKSVTVRTLEGDVRRLKLKYENLASE 186

Query: 187 K-----------KFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQSSSNE 246
           K           KF WNQ+N++E   T KL SK SELE AN+KIE L++++EEL SS+ E
Sbjct: 187 KNSQITALLAENKFAWNQFNVLETQYTDKLNSKDSELEKANRKIEALISNMEELNSSNAE 246

Query: 247 KDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAGTKAFS 306
           KD II  L+ +V + E ++SK  HE+S+ SR++EL RKS NA+ TPV+  C+ AG +   
Sbjct: 247 KDAIIERLKAEVSQKEANASKF-HEVSKKSREVELLRKSRNASCTPVIKRCS-AGGRTSV 306

Query: 307 SGGKNGTKNRSNVIVNKV--------MLSAQPSHSGNQKRRRGDANSDPETPRLFTSNFK 352
            GGK+G ++  NVIV K         +L      S + KR++ D     ETP+LFTS FK
Sbjct: 307 LGGKHGGRDGGNVIVKKETSARNDPDLLKDSGKGSRSSKRKKDDVTPISETPKLFTSTFK 357

[Close]

BLAST of Cp4.1LG02g07920.1 vs. NCBI nr
Match: gi|645229002|ref|XP_008221258.1| (PREDICTED: nuclear distribution protein nudE homolog 1 [Prunus mume])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 171/370 (46.22%), Postives = 244/370 (65.95%), Query Frame = 1


Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S+ S++R+NW   F+ L QM++ QQ+QLETL K+R+LLEDRV++Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQRQNWQNTFSGLVQMIRYQQSQLETLAKDRQLLEDRVRIQNERWTYDIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           L +D ISQMK DL  Q++  +LQA+K +L+ GLKQ E YL +LK+E++++EL+ FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
             L++K S      L+   E G+   RI     S   +  E++RSK LE ++RRL+ +Y+
Sbjct: 121 --LYNKFS-----DLKGGGEDGDK--RISNT-KSPKKSKQEKQRSKQLEDDLRRLKQQYD 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           L+ EKKF+WNQY +ME + T KL+SK SE+E A   I+  LA +E LQ
Sbjct: 181 KLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEANIQNFLAHMEHLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+ EKDG +A+L +++ KME+DS+KLK E+S+LS +L+L RKS +A++TP+LN C  AG
Sbjct: 241 SSNKEKDGKVAILISKIAKMESDSNKLKEEVSKLSTELDLLRKSTSASSTPLLNHCT-AG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQ--------PSHSGNQKRRRGDANSDPETPRLF 352
           T+ +S  G N  K+R+NV V K   +AQ           S   KR+  D  +  ETP+LF
Sbjct: 301 TRTYSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISETPKLF 359

[Close]

BLAST of Cp4.1LG02g07920.1 vs. NCBI nr
Match: gi|596299046|ref|XP_007227591.1| (hypothetical protein PRUPE_ppa016441mg [Prunus persica])

HSP 1 Score: 274.2 bits (700), Expect = 3.1e-70
Identity = 175/370 (47.30%), Postives = 241/370 (65.14%), Query Frame = 1


Query: 1   MGKSNGSQVSNERRNWGKIFNALTQMLQTQQNQLETLVKERKLLEDRVKMQHERWVTDIR 60
           M     S+ S++ +NW   FN L QM++ QQ+QLETL K+R+LLEDRV+ Q+ERW  DIR
Sbjct: 1   MAVKERSRASSQSQNWQNTFNGLVQMIRDQQSQLETLAKDRQLLEDRVRTQNERWTYDIR 60

Query: 61  LYDDHISQMKNDLFVQDMERALQASKSDLLTGLKQMEVYLYRLKIEHSEAELDDFKSFFD 120
           L +D ISQMK DL  Q++  +LQA+K +L+ GLKQ E YL +LK+E++++EL+ FK +FD
Sbjct: 61  LLEDQISQMKGDLEFQELAGSLQAAKFELVLGLKQREGYLTKLKLEYTDSELEGFKGWFD 120

Query: 121 DLLFHKSSSPQETSLRSSSEAGEANGRIEGVLLSACGNTDEERRSKALEGEVRRLRSEYE 180
             L++K S      L+   E G+   RI     S   +  E++RSK LE ++RRL  +Y+
Sbjct: 121 --LYNKFS-----DLKGGGEDGDK--RISNT-KSPKKSKQEKQRSKQLEDDLRRLNQQYD 180

Query: 181 K-----------LVTEKKFLWNQYNLMENDCTRKLKSKQSELELANQKIEKLLASLEELQ 240
           K           L+ EKKF+WNQY +ME + T KL+SK SE+E A  KI+  LA +E LQ
Sbjct: 181 KLASEKSSEVSALLAEKKFVWNQYKIMEENYTTKLRSKHSEVEQAEAKIQNFLAHMEHLQ 240

Query: 241 SSSNEKDGIIAMLQTQVGKMETDSSKLKHEISRLSRDLELQRKSFNANATPVLNPCNKAG 300
           SS+ EKDG IA+L ++V KME+DS+KLK EIS+LS +L+L RKS +A++TP+LN C  AG
Sbjct: 241 SSNKEKDGKIAILISKVAKMESDSNKLKEEISKLSTELDLLRKSTSASSTPLLNHCT-AG 300

Query: 301 TKAFSSGGKNGTKNRSNVIVNKVMLSAQ--------PSHSGNQKRRRGDANSDPETPRLF 352
           T+  S  G N  K+R+NV V K   +AQ           S   KR+  D  +  ETP+LF
Sbjct: 301 TRTCSLRGNNSAKDRTNVTVKKDSSAAQLPDPIKDTRKGSSISKRKIDDVITISETPKLF 359

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g07920.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g07920.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH58_CUCSA	2.1e-126	70.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872190 PE=4 SV=1	[more]
A0A061FKJ5_THECC	1.6e-73	47.40	Cytomatrix protein-related, putative OS=Theobroma cacao GN=TCM_034227 PE=4 SV=1	[more]
M5Y9L9_PRUPE	2.2e-70	47.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016441mg PE=4 SV=1	[more]
E0CQ59_VITVI	1.0e-64	43.12	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14300 PE=4 SV=...	[more]
B9GQV1_POPTR	1.0e-64	46.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02380g PE=4 SV=2	[more]

BLAST of Cp4.1LG02g07920.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19980.1	1.5e-51	38.89	cytomatrix protein-related	[more]

BLAST of Cp4.1LG02g07920.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437422\|ref\|XP_004136491.1\|	3.1e-126	70.03	PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus]	[more]
gi\|659132965\|ref\|XP_008466482.1\|	2.3e-121	68.39	PREDICTED: paramyosin [Cucumis melo]	[more]
gi\|590594269\|ref\|XP_007017804.1\|	2.3e-73	47.40	Cytomatrix protein-related, putative [Theobroma cacao]	[more]
gi\|645229002\|ref\|XP_008221258.1\|	2.4e-70	46.22	PREDICTED: nuclear distribution protein nudE homolog 1 [Prunus mume]	[more]
gi\|596299046\|ref\|XP_007227591.1\|	3.1e-70	47.30	hypothetical protein PRUPE_ppa016441mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g07920	Cp4.1LG02g07920	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07920.1	Cp4.1LG02g07920.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07920.1:five_prime_utr:001	Cp4.1LG02g07920.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07920.1:cds:001	Cp4.1LG02g07920.1:cds:001	CDS
Cp4.1LG02g07920.1:cds:002	Cp4.1LG02g07920.1:cds:002	CDS
Cp4.1LG02g07920.1:cds:003	Cp4.1LG02g07920.1:cds:003	CDS
Cp4.1LG02g07920.1:cds:004	Cp4.1LG02g07920.1:cds:004	CDS
Cp4.1LG02g07920.1:cds:005	Cp4.1LG02g07920.1:cds:005	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07920.1:three_prime_utr:001	Cp4.1LG02g07920.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 204..231 score: -coord: 158..185 score: -coord: 20..54 scor
None	No IPR available	PANTHER	PTHR35992	FAMILY NOT NAMED	coord: 1..351 score: 1.5