Lsi06G004840 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G004840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein THEMIS2
Location	chr06 : 5589710 .. 5590126 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCAACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA

mRNA sequence

ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCAACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA

Coding sequence (CDS)

ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCAACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA

Protein sequence

MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

Homology

[Close]

BLAST of Lsi06G004840 vs. TrEMBL
Match: A0A0A0LXE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605770 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 9.9e-64
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           KGSDIVSKEMK+PPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG
Sbjct: 61  KGSDIVSKEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRKSKPRRAAEAGV+CK
Sbjct: 121 SRRKSKPRRAAEAGVSCK 138

[Close]

BLAST of Lsi06G004840 vs. TrEMBL
Match: W9QYA2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018387 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.3e-50
Identity = 113/138 (81.88%), Postives = 124/138 (89.86%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG++LTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEID+EE EKIE++DSEN 
Sbjct: 1   MGRGRGKGKRLTVTNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDDEEVEKIEEDDSENA 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K   I +KE KSP AAENGK+R+R SQ KEK D VK+ENG+GTRSSTDEST+SNGFRHNG
Sbjct: 61  KAG-IPTKEAKSPSAAENGKKRKRYSQAKEKSDSVKEENGNGTRSSTDESTKSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRKSKPRRAAEAGV CK
Sbjct: 121 SRRKSKPRRAAEAGVECK 137

[Close]

BLAST of Lsi06G004840 vs. TrEMBL
Match: U5GK56_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s22010g PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-49
Identity = 114/138 (82.61%), Postives = 123/138 (89.13%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG+KLTV+NHDD GSGEEEKIPAQKRRGRPQKPLKD IDEEE EKIEDED E  
Sbjct: 1   MGRGRGKGKKLTVSNHDDTGSGEEEKIPAQKRRGRPQKPLKDGIDEEEVEKIEDEDVEKG 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K +DI SK+ KSPPAAENGK+R+R SQ KEK D VK+ENG GTRSSTD+ST+SNGFRHNG
Sbjct: 61  K-TDITSKDSKSPPAAENGKKRKRYSQAKEKPDSVKEENGVGTRSSTDDSTKSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRKSKPRRAAEAGV CK
Sbjct: 121 SRRKSKPRRAAEAGVECK 137

[Close]

BLAST of Lsi06G004840 vs. TrEMBL
Match: M5WDG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013160mg PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.0e-49
Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG++LTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEE +KIE +DSEN 
Sbjct: 1   MGRGRGKGKRLTVTNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDEEETDKIEADDSENG 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K   I SKE+KSP  AENGK+R+R SQVKEK D VK+ENG GTRSSTD+ST+SNGFRHNG
Sbjct: 61  KAG-IASKEIKSPSVAENGKKRKRYSQVKEKSDSVKEENGIGTRSSTDDSTKSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRK+KPRRAAEAGV CK
Sbjct: 121 SRRKNKPRRAAEAGVECK 137

[Close]

BLAST of Lsi06G004840 vs. TrEMBL
Match: F6GUD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01420 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 113/138 (81.88%), Postives = 122/138 (88.41%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG+KLTVTNH+D GSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIEDEDSEN 
Sbjct: 1   MGRGRGKGKKLTVTNHEDPGSGEEEKIPAQKRRGRPQKPLKDEIDEEEVEKIEDEDSENA 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K   I SKEMKS  AAENGK+R+R SQ KEK D VK+ENG GTRSSTD+ST+SNGFR+N 
Sbjct: 61  K-IGISSKEMKSSAAAENGKKRKRYSQAKEKPDSVKEENGIGTRSSTDDSTKSNGFRNNR 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           +RRKSKPRRAAEAGV CK
Sbjct: 121 NRRKSKPRRAAEAGVECK 137

[Close]

BLAST of Lsi06G004840 vs. TAIR10
Match: AT2G42190.1 (AT2G42190.1 unknown protein)

HSP 1 Score: 109.0 bits (271), Expect = 2.4e-24
Identity = 75/148 (50.68%), Postives = 95/148 (64.19%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE---------K 60
           M RGRGKG+K   +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE E         +
Sbjct: 1   MRRGRGKGKKQNASAREDRGSGDEEKIPAYRRRGRPQKPMKDDFEEEEEEDDEEMVEKME 60

Query: 61  IEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDEST 120
           +EDED E   GS + SK++         K R+R        D  ++ENG G++ +TD+ST
Sbjct: 61  VEDEDEEIDDGS-VTSKDL---------KERKRKMSNGSNTDLTEEENGLGSKPNTDDST 120

Query: 121 RSN--GFRHNGSRRKSKPRRAAEAGVNC 138
           RS   GFR NGSRRKSKPRRAAEA V C
Sbjct: 121 RSTSIGFRQNGSRRKSKPRRAAEAVVEC 138

[Close]

BLAST of Lsi06G004840 vs. TAIR10
Match: AT3G57930.1 (AT3G57930.1 unknown protein)

HSP 1 Score: 107.1 bits (266), Expect = 9.0e-24
Identity = 71/140 (50.71%), Postives = 95/140 (67.86%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  
Sbjct: 1   MRRGRGKGKRQNATAREDRGSGEEEKIPAFRKRGRPQKPVKDE-EEEEEELVKKTDEEED 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSN---GFR 120
           K  D            ENG++R++  + KE  +  ++ENG G++SST++S +S+   GFR
Sbjct: 61  KDDDTNGSVTSKENVTENGRKRKKPVESKES-NITEEENGVGSKSSTEDSMKSSSSIGFR 120

Query: 121 HNGSRRKSKPRRAAEAGVNC 138
            NGSRRK+KPRRAAEA V C
Sbjct: 121 QNGSRRKNKPRRAAEAVVEC 138

[Close]

BLAST of Lsi06G004840 vs. NCBI nr
Match: gi|449462601|ref|XP_004149029.1| (PREDICTED: uncharacterized protein LOC101218566 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKGRKLTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           KGSDIVSKEMK+PPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG
Sbjct: 61  KGSDIVSKEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRKSKPRRAAEAGV+CK
Sbjct: 121 SRRKSKPRRAAEAGVSCK 138

[Close]

BLAST of Lsi06G004840 vs. NCBI nr
Match: gi|703065085|ref|XP_010087361.1| (hypothetical protein L484_018387 [Morus notabilis])

HSP 1 Score: 204.9 bits (520), Expect = 9.0e-50
Identity = 113/138 (81.88%), Postives = 124/138 (89.86%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG++LTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEID+EE EKIE++DSEN 
Sbjct: 1   MGRGRGKGKRLTVTNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDDEEVEKIEEDDSENA 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K   I +KE KSP AAENGK+R+R SQ KEK D VK+ENG+GTRSSTDEST+SNGFRHNG
Sbjct: 61  KAG-IPTKEAKSPSAAENGKKRKRYSQAKEKSDSVKEENGNGTRSSTDESTKSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRKSKPRRAAEAGV CK
Sbjct: 121 SRRKSKPRRAAEAGVECK 137

[Close]

BLAST of Lsi06G004840 vs. NCBI nr
Match: gi|1009118575|ref|XP_015875934.1| (PREDICTED: uncharacterized protein LOC107412633 [Ziziphus jujuba])

HSP 1 Score: 204.9 bits (520), Expect = 9.0e-50
Identity = 113/138 (81.88%), Postives = 124/138 (89.86%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG++LTVTNHDD GSGEEEKIP QKRRGRPQKPLKDE+DEEE EKIE++DSEN 
Sbjct: 1   MGRGRGKGKRLTVTNHDDPGSGEEEKIPTQKRRGRPQKPLKDEMDEEENEKIEEDDSENA 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K   I +KEMKSPPAAENGK+R+R SQVKEK D V +ENG GTRSSTD+ST+SNGFRHNG
Sbjct: 61  KAG-ISTKEMKSPPAAENGKKRKRYSQVKEKSDSVNEENGVGTRSSTDDSTKSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRKSKPRRAAEAGV CK
Sbjct: 121 SRRKSKPRRAAEAGVECK 137

[Close]

BLAST of Lsi06G004840 vs. NCBI nr
Match: gi|694376649|ref|XP_009364718.1| (PREDICTED: uncharacterized protein LOC103954606 [Pyrus x bretschneideri])

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-49
Identity = 113/138 (81.88%), Postives = 125/138 (90.58%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG++LTV NHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEEAE+IE +DSEN 
Sbjct: 1   MGRGRGKGKRLTVNNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAERIEADDSENG 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K   I SKE+KSP AAENGK+R+R SQVKEK D VK+ENG+GTRSSTD+ST+SNGFRHNG
Sbjct: 61  KAG-ISSKEVKSPSAAENGKKRKRQSQVKEKSDSVKEENGNGTRSSTDDSTKSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRK+KPRRAAEAGV CK
Sbjct: 121 SRRKNKPRRAAEAGVECK 137

[Close]

BLAST of Lsi06G004840 vs. NCBI nr
Match: gi|566164031|ref|XP_006386091.1| (hypothetical protein POPTR_0003s22010g [Populus trichocarpa])

HSP 1 Score: 203.0 bits (515), Expect = 3.4e-49
Identity = 114/138 (82.61%), Postives = 123/138 (89.13%), Query Frame = 1


Query: 1   MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60
           MGRGRGKG+KLTV+NHDD GSGEEEKIPAQKRRGRPQKPLKD IDEEE EKIEDED E  
Sbjct: 1   MGRGRGKGKKLTVSNHDDTGSGEEEKIPAQKRRGRPQKPLKDGIDEEEVEKIEDEDVEKG 60

Query: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120
           K +DI SK+ KSPPAAENGK+R+R SQ KEK D VK+ENG GTRSSTD+ST+SNGFRHNG
Sbjct: 61  K-TDITSKDSKSPPAAENGKKRKRYSQAKEKPDSVKEENGVGTRSSTDDSTKSNGFRHNG 120

Query: 121 SRRKSKPRRAAEAGVNCK 139
           SRRKSKPRRAAEAGV CK
Sbjct: 121 SRRKSKPRRAAEAGVECK 137

The following BLAST results are available for this feature:

BLAST of Lsi06G004840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G004840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXE8_CUCSA	9.9e-64	97.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605770 PE=4 SV=1	[more]
W9QYA2_9ROSA	6.3e-50	81.88	Uncharacterized protein OS=Morus notabilis GN=L484_018387 PE=4 SV=1	[more]
U5GK56_POPTR	2.4e-49	82.61	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s22010g PE=4 SV=1	[more]
M5WDG9_PRUPE	9.0e-49	81.16	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013160mg PE=4 SV=1	[more]
F6GUD3_VITVI	1.3e-47	81.88	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01420 PE=3 SV=...	[more]

BLAST of Lsi06G004840 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42190.1	2.4e-24	50.68	unknown protein	[more]
AT3G57930.1	9.0e-24	50.71	unknown protein	[more]

BLAST of Lsi06G004840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462601\|ref\|XP_004149029.1\|	1.4e-63	97.83	PREDICTED: uncharacterized protein LOC101218566 [Cucumis sativus]	[more]
gi\|703065085\|ref\|XP_010087361.1\|	9.0e-50	81.88	hypothetical protein L484_018387 [Morus notabilis]	[more]
gi\|1009118575\|ref\|XP_015875934.1\|	9.0e-50	81.88	PREDICTED: uncharacterized protein LOC107412633 [Ziziphus jujuba]	[more]
gi\|694376649\|ref\|XP_009364718.1\|	2.0e-49	81.88	PREDICTED: uncharacterized protein LOC103954606 [Pyrus x bretschneideri]	[more]
gi\|566164031\|ref\|XP_006386091.1\|	3.4e-49	82.61	hypothetical protein POPTR_0003s22010g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042967	acyl-carrier-protein biosynthetic process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0009107	lipoate biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016415	octanoyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G004840.1	Lsi06G004840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34055	FAMILY NOT NAMED	coord: 1..138 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G004840	Csa1G605770	Cucumber (Chinese Long) v2	culsiB058
Lsi06G004840	CSPI01G30040	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G004840	Cucsa.143100	Cucumber (Gy14) v1	cgylsiB230
Lsi06G004840	CmaCh10G009580	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G004840	CmaCh11G008320	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G004840	CmoCh11G008400	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G004840	CmoCh10G010050	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G004840	Cla004803	Watermelon (97103) v1	lsiwmB396
Lsi06G004840	MELO3C015682	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G004840	ClCG03G013620	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G004840	MELO3C015682.2	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G004840	Cla97C03G063900	Watermelon (97103) v2	lsiwmbB365
Lsi06G004840	Bhi02G001323	Wax gourd	lsiwgoB505
Lsi06G004840	Cp4.1LG04g11920	Cucurbita pepo (Zucchini)	cpelsiB563
Lsi06G004840	Cp4.1LG18g01410	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G004840	CsGy1G029360	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G004840	Carg17985	Silver-seed gourd	carlsiB155
Lsi06G004840	Carg16954	Silver-seed gourd	carlsiB424
Lsi06G004840	CsaV3_1G042450	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G004840	Wax gourd	lsiwgoB495
Lsi06G004840	Bottle gourd (USVL1VR-Ls)	lsilsiB116
Lsi06G004840	Cucumber (Gy14) v1	cgylsiB032
Lsi06G004840	Cucurbita maxima (Rimu)	cmalsiB844
Lsi06G004840	Wild cucumber (PI 183967)	cpilsiB545
Lsi06G004840	Cucumber (Chinese Long) v2	culsiB530
Lsi06G004840	Melon (DHL92) v3.5.1	lsimeB395
Lsi06G004840	Cucumber (Gy14) v2	cgyblsiB499
Lsi06G004840	Cucumber (Chinese Long) v3	cuclsiB566