Lsi06G004840.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCAACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCAACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTCACGAATCATGACGATGGTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGAAGGGGAAGGCCACAGAAGCCGTTGAAGGATGAGATTGATGAGGAAGAAGCTGAAAAGATCGAAGACGAGGACAGCGAGAATCTGAAAGGCAGTGACATTGTGAGCAAGGAGATGAAAAGCCCACCTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGGGACGGAACACGATCAAGCACTGATGAATCAACCAGATCAAATGGATTTCGTCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCTGAAGCGGGAGTTAACTGCAAGTGA MGRGRGKGRKLTVTNHDDGGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENLKGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
BLAST of Lsi06G004840.1 vs. TrEMBL
Match: A0A0A0LXE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605770 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 9.9e-64 Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. TrEMBL
Match: W9QYA2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018387 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 6.3e-50 Identity = 113/138 (81.88%), Postives = 124/138 (89.86%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. TrEMBL
Match: U5GK56_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s22010g PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.4e-49 Identity = 114/138 (82.61%), Postives = 123/138 (89.13%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. TrEMBL
Match: M5WDG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013160mg PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 9.0e-49 Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. TrEMBL
Match: F6GUD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01420 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47 Identity = 113/138 (81.88%), Postives = 122/138 (88.41%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. TAIR10
Match: AT2G42190.1 (AT2G42190.1 unknown protein) HSP 1 Score: 109.0 bits (271), Expect = 2.4e-24 Identity = 75/148 (50.68%), Postives = 95/148 (64.19%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. TAIR10
Match: AT3G57930.1 (AT3G57930.1 unknown protein) HSP 1 Score: 107.1 bits (266), Expect = 9.0e-24 Identity = 71/140 (50.71%), Postives = 95/140 (67.86%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. NCBI nr
Match: gi|449462601|ref|XP_004149029.1| (PREDICTED: uncharacterized protein LOC101218566 [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63 Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. NCBI nr
Match: gi|703065085|ref|XP_010087361.1| (hypothetical protein L484_018387 [Morus notabilis]) HSP 1 Score: 204.9 bits (520), Expect = 9.0e-50 Identity = 113/138 (81.88%), Postives = 124/138 (89.86%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. NCBI nr
Match: gi|1009118575|ref|XP_015875934.1| (PREDICTED: uncharacterized protein LOC107412633 [Ziziphus jujuba]) HSP 1 Score: 204.9 bits (520), Expect = 9.0e-50 Identity = 113/138 (81.88%), Postives = 124/138 (89.86%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. NCBI nr
Match: gi|694376649|ref|XP_009364718.1| (PREDICTED: uncharacterized protein LOC103954606 [Pyrus x bretschneideri]) HSP 1 Score: 203.8 bits (517), Expect = 2.0e-49 Identity = 113/138 (81.88%), Postives = 125/138 (90.58%), Query Frame = 1
BLAST of Lsi06G004840.1 vs. NCBI nr
Match: gi|566164031|ref|XP_006386091.1| (hypothetical protein POPTR_0003s22010g [Populus trichocarpa]) HSP 1 Score: 203.0 bits (515), Expect = 3.4e-49 Identity = 114/138 (82.61%), Postives = 123/138 (89.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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