Carg17985 (gene) Silver-seed gourd

Overview
NameCarg17985
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRho GTPase-activating gacO-like protein
LocationCucurbita_argyrosperma_scaffold_171 : 156750 .. 158723 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGGTCTTTAAGTTGCCTTCCCCACTGTTCCCCATATCCCAATCCTTCTTAAATCCTTGTTTCGTTTTTCAATTTCCTCTTCAGATCATTGCTTGTATGCCTCTCAAATCCTCCACTTTTTCTGCTCTTCAATCCACCAACGCCCTCATGAATAATCCTTCTCTGTTTTTGTGATTTTCTTTTCGTTTTCTGCAGATTCACTCACTGTAATGCCTTCTTTCCATTGATTCGTATGGCCTTCGTTTCTTATCAGGTTTCTTTTATTTCTCTGCTTTTTCTTCGCTCTGAACTTGAAATTGTTTGTCGATCAACTCTTCTTATTGCTCTAATCTTGCTTTCTGTCTTTCCGATTCTGCTGGGTTTTGTTGGATCTTGTTTGTCTCTGTTGTTGCGGGATTTTGTCGTTCTTATTCGCTTTTGTTATCGATTCTTATATTTGTTTGTTTTGTGAGAATCTTGTTGCTTCGAATTGGGGGTTTTCCTTTTTCTGATTGAGATTTGTTTATCTTTGTGGTTCTGTTCAAGAACTGAAGAGATTTTCAGAACTTTTTGATTTTCCCCTTCGTAGTTCTTCTGAATGCTCTGATTGCTTGCTATGTCTTTTTTTACATAGTTTTGCATTTGATTCAGCTATTTCTTCACTCTAGGGAAGTCATTTTTGTGTTCTGCTAGCTTACGTTACTCAACTGAAGTTCAAGAACTTTGTCCAAATTTCTCCCACTTGAGTGCACAAGTAAAATAAACATCCTCTATGAACTTCGATTTTGCTTTCAACTAAACTACCATCGAACCCAAAAGCTTAAGTTTCTAGGTTAGAGTATATGGAGGATTCGAACCTTAAAACTTTTCGAAGGTAAGTAGTGTCTTGACCGATCGAGTTATACTCATATCGACTCGGTTAGAACATATTTAACCTATAGTTGGGAGGACATGGTATTGTAGGGAATTAAACTTAAGAGTGCACAACATTGAACCTGAAATCTTTATGTCTTGACTGATCGAGCTATACGCATATCGACTCGGTTAGAACATGTTTAACCTACAATTGGGAGGACATGGTATTGTAGGGATTTAAACTTAAGAGTGCACAACATTGAAGCTGAAATCTTAAGTTCATAGGTTAGAGTATATTTGATCTTGTATAGTACCCTTAATGCTCATCTACATGTCAACTTCGATATTAATTTGAATTTCGAAGCCTAGCATGAGACTCATACTCTGATACTATGTTAAATCATTGTGTATATATATTGTTTCATGTTTACAGTTCATGATTTATGACAGAAGAACTTATGATGAAGCCTCATAAATTTCATCTCAGTTCTAGAGAATTCAAGCATCTTTATCTTTGTGTTTATAAAGATGTGGTTTTGTTGATATATAACTAACATCTGGTTACGATGTTCGAGCTTGTTGCGTTTATTTACTAAATGAGTGTCGTGTCGTAAGAGAATTGAAATTGTTTCCTATGTAAATGTTTTATGCTTGGCAGTGGCCATCTGTTGCGTGATTTTTTTCGTTCTTGGAGTTCTTAAAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTTACAAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCGCAAAAGCGAAGGGGAAGGCCACAAAAGCCATTGAAGGACGAGATCGACGAGGAAGAAGCTGAAAAGATAGAAGACGACGACATCGAGAACGTGAAAGGCAATGAAATTGTGAGCAAGGAGATGAAAAGCAGCAGCAGCCCAGCTGCAGCAACAGAGAATGGGAAAAGGAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGAGACGGAACACGATCAAGCACTGATGAATCAACCAGATCGAATGGATTTCGCCACAACGGAAGCAGGAGAAAAAGCAAGCCCCGTCGAGCTGCCGAAGCAGGCGTTAACTGCAAGTAA

mRNA sequence

ATGGGCAGATTCACTCACTGTAATGCCTTCTTTCCATTGATTCGTATGGCCTTCGTTTCTTATCAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTTACAAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCGCAAAAGCGAAGGGGAAGGCCACAAAAGCCATTGAAGGACGAGATCGACGAGGAAGAAGCTGAAAAGATAGAAGACGACGACATCGAGAACGTGAAAGGCAATGAAATTGTGAGCAAGGAGATGAAAAGCAGCAGCAGCCCAGCTGCAGCAACAGAGAATGGGAAAAGGAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGAGACGGAACACGATCAAGCACTGATGAATCAACCAGATCGAATGGATTTCGCCACAACGGAAGCAGGAGAAAAAGCAAGCCCCGTCGAGCTGCCGAAGCAGGCGTTAACTGCAAGTAA

Coding sequence (CDS)

ATGGGCAGATTCACTCACTGTAATGCCTTCTTTCCATTGATTCGTATGGCCTTCGTTTCTTATCAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTTACAAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCGCAAAAGCGAAGGGGAAGGCCACAAAAGCCATTGAAGGACGAGATCGACGAGGAAGAAGCTGAAAAGATAGAAGACGACGACATCGAGAACGTGAAAGGCAATGAAATTGTGAGCAAGGAGATGAAAAGCAGCAGCAGCCCAGCTGCAGCAACAGAGAATGGGAAAAGGAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGAGACGGAACACGATCAAGCACTGATGAATCAACCAGATCGAATGGATTTCGCCACAACGGAAGCAGGAGAAAAAGCAAGCCCCGTCGAGCTGCCGAAGCAGGCGTTAACTGCAAGTAA

Protein sequence

MGRFTHCNAFFPLIRMAFVSYQRMGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Homology
[Close]
BLAST of Carg17985 vs. NCBI nr
Match: XP_023530954.1 (uncharacterized protein LOC111793344 [Cucurbita pepo subsp. pepo] >XP_023530955.1 uncharacterized protein LOC111793344 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50
Identity = 136/142 (95.77%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR      KLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF
Sbjct: 61  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKPRRAAEAGVNCK
Sbjct: 121 RHNGSRRKSKPRRAAEAGVNCK 142

[Close]
BLAST of Carg17985 vs. NCBI nr
Match: XP_022968481.1 (uncharacterized protein LOC111467706 [Cucurbita maxima] >XP_022968490.1 uncharacterized protein LOC111467706 [Cucurbita maxima])

HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49
Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR      KLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIEN+
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENL 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           KGNEIVSKE XXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF
Sbjct: 61  KGNEIVSKEXXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKPRRAAEAGVNCK
Sbjct: 121 RHNGSRRKSKPRRAAEAGVNCK 142

[Close]
BLAST of Carg17985 vs. NCBI nr
Match: XP_023516906.1 (uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 110/142 (77.46%), Postives = 112/142 (78.87%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR      KLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDD ENV
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDSENV 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           KG +IVSKEM                     VKEKLDPVKDENGDGTRSSTDESTRSNGF
Sbjct: 61  KGCDIVSKEM----KSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKP RAAEAGVNC+
Sbjct: 121 RHNGSRRKSKPHRAAEAGVNCR 138

[Close]
BLAST of Carg17985 vs. NCBI nr
Match: XP_022927916.1 (uncharacterized protein LOC111434674 [Cucurbita moschata] >XP_022927925.1 uncharacterized protein LOC111434674 [Cucurbita moschata])

HSP 1 Score: 191.4 bits (485), Expect = 2.4e-45
Identity = 129/142 (90.85%), Postives = 129/142 (90.85%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR      KLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEA     DDIENV
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAXXXXXDDIENV 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           KGNEIVSK  XXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF
Sbjct: 61  KGNEIVSKXXXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKPRRAAEAGVNCK
Sbjct: 121 RHNGSRRKSKPRRAAEAGVNCK 142

[Close]
BLAST of Carg17985 vs. NCBI nr
Match: XP_022960708.1 (uncharacterized protein LOC111461426 [Cucurbita moschata])

HSP 1 Score: 190.3 bits (482), Expect = 5.3e-45
Identity = 108/142 (76.06%), Postives = 110/142 (77.46%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR      K TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIEDDD ENV
Sbjct: 1   MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENV 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           KG +IVSKEM                     VKEKLDPVKDENGDGTRSSTDESTRSNGF
Sbjct: 61  KGCDIVSKEM----KSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKP RAAEAGVNC+
Sbjct: 121 RHNGSRRKSKPHRAAEAGVNCR 138

[Close]
BLAST of Carg17985 vs. TAIR10
Match: AT2G42190.1 (unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.8e-08
Identity = 71/143 (49.65%), Postives = 80/143 (55.94%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           M R      K   +  +D GSG+EEKIPA +RRGRPQKP+                    
Sbjct: 1   MRRGRGKGKKQNASAREDRGSGDEEKIPAYRRRGRPQKPM-----XXXXXXXXXXXXXXX 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSN-- 143
                     XXXXXXXXXXXXXXXXXXXXX           NG G++ +TD+STRS   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLGSKPNTDDSTRSTSI 120

Query: 144 GFRHNGSRRKSKPRRAAEAGVNC 165
           GFR NGSRRKSKPRRAAEA V C
Sbjct: 121 GFRQNGSRRKSKPRRAAEAVVEC 138

[Close]
BLAST of Carg17985 vs. TrEMBL
Match: tr|A0A1S3BRW6|A0A1S3BRW6_CUCME (uncharacterized protein LOC103492511 OS=Cucumis melo OX=3656 GN=LOC103492511 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40
Identity = 101/142 (71.13%), Postives = 105/142 (73.94%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR      KLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEA          +
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAXXXXXXXXXXL 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           KG++IVSKEM                     VKEKLDPVKDENGDGTRSSTDESTRSNGF
Sbjct: 61  KGSDIVSKEM----KNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKPRRAAEAGV+CK
Sbjct: 121 RHNGSRRKSKPRRAAEAGVSCK 138

[Close]
BLAST of Carg17985 vs. TrEMBL
Match: tr|A0A0A0LXE8|A0A0A0LXE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605770 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40
Identity = 101/142 (71.13%), Postives = 105/142 (73.94%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR      KLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEA          +
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAXXXXXXXXXXL 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           KG++IVSKEM                     VKEKLDPVKDENGDGTRSSTDESTRSNGF
Sbjct: 61  KGSDIVSKEM----KNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKPRRAAEAGV+CK
Sbjct: 121 RHNGSRRKSKPRRAAEAGVSCK 138

[Close]
BLAST of Carg17985 vs. TrEMBL
Match: tr|W9QYA2|W9QYA2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018387 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 100/142 (70.42%), Postives = 107/142 (75.35%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR XXXXX+LTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEID+EE EKIE+DD EN 
Sbjct: 1   MGRGXXXXXRLTVTNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDDEEVEKIEEDDSENA 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           K   I +KE                       KEK D VK+ENG+GTRSSTDEST+SNGF
Sbjct: 61  KAG-IPTKE----AKSPSAAENGKKRKRYSQAKEKSDSVKEENGNGTRSSTDESTKSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRKSKPRRAAEAGV CK
Sbjct: 121 RHNGSRRKSKPRRAAEAGVECK 137

[Close]
BLAST of Carg17985 vs. TrEMBL
Match: tr|A0A2P5D8Y5|A0A2P5D8Y5_PARAD (Rho GTPase-activating gacO-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_085060 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 100/142 (70.42%), Postives = 110/142 (77.46%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR XXXXX+LTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEID+EEAEKIE+DD EN 
Sbjct: 1   MGRGXXXXXRLTVTNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDDEEAEKIEEDDSENG 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           K   I +KE+                     VKEK D VK+ENG+GTRSSTD+ST+SNGF
Sbjct: 61  KA-VISTKEV----KSPTAAENGKKRKRYSQVKEKSDSVKEENGNGTRSSTDDSTKSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRK+KPRRAAEAGV CK
Sbjct: 121 RHNGSRRKNKPRRAAEAGVECK 137

[Close]
BLAST of Carg17985 vs. TrEMBL
Match: tr|M5WDG9|M5WDG9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G020200 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.7e-36
Identity = 100/142 (70.42%), Postives = 107/142 (75.35%), Query Frame = 0 

Query: 24  MGRXXXXXXKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENV 83
           MGR XXXXX+LTVTNHDD GSGEEEKIPAQKRRGRPQKPLKDEIDEEE +KIE DD EN 
Sbjct: 1   MGRGXXXXXRLTVTNHDDPGSGEEEKIPAQKRRGRPQKPLKDEIDEEETDKIEADDSENG 60

Query: 84  KGNEIVSKEMXXXXXXXXXXXXXXXXXXXXXVKEKLDPVKDENGDGTRSSTDESTRSNGF 143
           K   I SKE+                     VKEK D VK+ENG GTRSSTD+ST+SNGF
Sbjct: 61  KAG-IASKEI----KSPSVAENGKKRKRYSQVKEKSDSVKEENGIGTRSSTDDSTKSNGF 120

Query: 144 RHNGSRRKSKPRRAAEAGVNCK 166
           RHNGSRRK+KPRRAAEAGV CK
Sbjct: 121 RHNGSRRKNKPRRAAEAGVECK 137

The following BLAST results are available for this feature:
BLAST of Carg17985 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023530954.13.2e-5095.77uncharacterized protein LOC111793344 [Cucurbita pepo subsp. pepo] >XP_023530955.... [more]
XP_022968481.13.6e-4994.37uncharacterized protein LOC111467706 [Cucurbita maxima] >XP_022968490.1 uncharac... [more]
XP_023516906.16.3e-4677.46uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo][more]
XP_022927916.12.4e-4590.85uncharacterized protein LOC111434674 [Cucurbita moschata] >XP_022927925.1 unchar... [more]
XP_022960708.15.3e-4576.06uncharacterized protein LOC111461426 [Cucurbita moschata][more]
BLAST of Carg17985 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42190.12.8e-0849.65unknown protein[more]
BLAST of Carg17985 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg17985 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BRW6|A0A1S3BRW6_CUCME4.5e-4071.13uncharacterized protein LOC103492511 OS=Cucumis melo OX=3656 GN=LOC103492511 PE=... [more]
tr|A0A0A0LXE8|A0A0A0LXE8_CUCSA4.5e-4071.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605770 PE=4 SV=1[more]
tr|W9QYA2|W9QYA2_9ROSA1.3e-3670.42Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018387 PE=4 SV=1[more]
tr|A0A2P5D8Y5|A0A2P5D8Y5_PARAD2.3e-3670.42Rho GTPase-activating gacO-like protein OS=Parasponia andersonii OX=3476 GN=PanW... [more]
tr|M5WDG9|M5WDG9_PRUPE6.7e-3670.42Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G020200 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17985-RACarg17985-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..132
NoneNo IPR availablePANTHERPTHR34055FAMILY NOT NAMEDcoord: 23..165

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17985Cla004803Watermelon (97103) v1carwmB0163
Carg17985Csa1G605770Cucumber (Chinese Long) v2carcuB0192
Carg17985MELO3C015682Melon (DHL92) v3.5.1carmeB0178
Carg17985ClCG03G013620Watermelon (Charleston Gray)carwcgB0165
Carg17985CSPI01G30040Wild cucumber (PI 183967)carcpiB0199
Carg17985Cucsa.143100Cucumber (Gy14) v1carcgyB0212
Carg17985CmaCh02G012270Cucurbita maxima (Rimu)carcmaB0233
Carg17985CmaCh11G008320Cucurbita maxima (Rimu)carcmaB0231
Carg17985CmaCh10G009580Cucurbita maxima (Rimu)carcmaB0230
Carg17985CmoCh11G008400Cucurbita moschata (Rifu)carcmoB0241
Carg17985CmoCh10G010050Cucurbita moschata (Rifu)carcmoB0240
Carg17985Lsi06G004840Bottle gourd (USVL1VR-Ls)carlsiB155
Carg17985Cp4.1LG05g05180Cucurbita pepo (Zucchini)carcpeB0249
Carg17985Cp4.1LG18g01410Cucurbita pepo (Zucchini)carcpeB0247
Carg17985Cp4.1LG04g11920Cucurbita pepo (Zucchini)carcpeB0248
Carg17985CsGy1G029360Cucumber (Gy14) v2carcgybB0186
Carg17985MELO3C015682.2Melon (DHL92) v3.6.1carmedB0182
Carg17985CsaV3_1G042450Cucumber (Chinese Long) v3carcucB0199
Carg17985Cla97C03G063900Watermelon (97103) v2carwmbB0178
Carg17985Bhi02G001323Wax gourdcarwgoB0223
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17985Carg16954Silver-seed gourdcarcarB208
Carg17985Carg02736Silver-seed gourdcarcarB210
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17985Silver-seed gourdcarcarB207
Carg17985Silver-seed gourdcarcarB209
Carg17985Cucurbita maxima (Rimu)carcmaB0232
Carg17985Cucurbita moschata (Rifu)carcmoB0242
Carg17985Cucurbita pepo (Zucchini)carcpeB0246
Carg17985Wax gourdcarwgoB0221