Lsi08G011260 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAATGTAATACAAATAAAATAATTTCACAATTTATTTCACGTATACAAGTGTAAAATGTTTAATTATTAATTTACATATGTATCTTTAATATATATATATATATTTTTTTTTACATTTTAAAATATATCCATCAATATCAATATTTTTATGTCAATAAATTTGAGACTTTAACATTTTCATTGACATAAACATTTTAAACCTTGAATTTCAATATTTTTTCCTTTAAAAACAAAACAATCACAAATGACTTAGGTCCCTATATTTACAATTTTGATTCATTTTGGCTCTTATATTTCCAAAATATCTATTTTAGTCCTTATATTTACAGCAATCGTTCATTTAATTCTTGGACTTTTGGAATATTTATTTTAGTTTCTCTACTTTTAAAAAATAACCATTATGGTCCTTTCATTTTTATATTATAATATATTTAGATCAAAATTATATCATGACACTTTATTCACTAAATCATTTAAAACTTAGCCATAAATCTATACTAAAGAGGTTTCATTGTTTGTACTAGGTGATAGTCTGTTCGATTTTGTCCGTTTTGAGGTCAACTAAGAATCAAACAAAATCAATTGGAGATATCCAATAAACAACAAAACCATTGGATTGATTTTTATTTGGTTCGATTTATTATCAGTTTGATTCTCAATTTGGTTCTCGATTTTGACATTTTTTTTCTTTCAAATTTTAATTTATATTTCTAATATTTTTTTGAATTAGTCATTTTTGCTAATTTTAAATTAAAATGGGGTCTATTTCTTTTCTTATAGATTGAAATTAGACATTTTTTTGACACTTTCTAAATAAAAAACACACACTCCACAATAATTAGTATTTTTTCTAAAACAATAAATATATATGCACCATAATAATTAAAATACTAAAAAATATCTAATGTTAGAGTTTATTTTTAAGGGTATATATACCATGACTTCAATTTTGATTAGTTTTTCCAATCAAAATCCAATCCAAATCAATACATATGTCTAATTTTATACTAAAAAAATCAAACCAAACCAGTTGATCGACTTAGATTAGTTTGGTTTTTCAATTTTTAGTTGCACTCCTAGTTTGTACAACTTATGTTAAAACTTTGCGAATCAAAATCAAAATTGTCAAATTTTAAAATATACAAACTAAAATGAATAAAATAAAGAGTATAAAATCAAAACAAACATTTTAAAAGTATAAAAACCACACAATTAGAGTATGGAACCAAAAATTTTAAAAGTAAGTAAATAAATAAAAATAATAATAATAATAATAAGCAACAACTAATTTTGAACCACAACCAAAGCATCACTCTTAGATTCTCATGACTACCTACGGTTTGAGAGGTTGAAATGTAATAAAGATTATTGAAAATCAGATGAGTGTTGGAATGTGTAAGGTATCGAAGACAGAATAGAAATGAAATCGTGACATGTGAAAGTGGTGGGAGAGAATGTTTGATTAAAAACTGTCGAAATGGAATGAGTTTAATATTACAAATTCGGTCCAAAATACTCCATCCAAACATAGATTTTAGATTACATTACAATCTAAACCCATTTCAATATGGTCCCAAACCGCTAATGGGAAGGAAGGATAAATTCGATTTGACAAAGAAGCCAAAAGGATTGGTCAAAGTCCAAAGTCAACAGTCCACGTATTATTATTGTCAAAGACAAGGGTCAACTTTCTTCGGAACGCAATAATTTTCTTCGCCTAGTTTCGAGAATAAGTCAGAAACTTCTAGAGATACACGGTTCTCCATATCCCCTCAAATTCCACGAAACTTCCTTCTCTTTCTCTATAAAAACATCAAAGCTCACAACTTCCCTGATCCTAGACTTTTCATCCAAAACCCAGAAAAGAAAACAACAAACAACAGCAGAAAGAAATCCCTCAGCCAGGAAAGCAAGAAGAACCTAAAGGAAGAGAAAAATATGTGTTTGGTATTTGTTTGCGATGAAGATCAGAGAGTATTATCAAGGCAACCAGCTCCAGGGGCATGCCCCTTCTGCGGAGGTATTATCCAAGCCACCGACATTGAAAGCCAATGGAGGTTCTGTTTCCTCCCTCTTTACTGGAAAACCAAACGAAAGTTCTATTGCACTATGTGCACCAGACAACTCGTTATGAAGTAG ATGTTAATTTTCGAGAATAAGTCAGAAACTTCTAGAGATACACGGTTCTCCATATCCCCTCAAATTCCACGAAACTTCCTTCTCTTTCTCTATAAAAACATCAAAGCTCACAACTTCCCTGATCCTAGACTTTTCATCCAAAACCCAGAAAAGAAAACAACAAACAACAGCAGAAAGAAATCCCTCAGCCAGGAAAGCAAGAAGAACCTAAAGGAAGAGAAAAATATGTGTTTGGTATTTGTTTGCGATGAAGATCAGAGAGTATTATCAAGGCAACCAGCTCCAGGGGCATGCCCCTTCTGCGGAGGTATTATCCAAGCCACCGACATTGAAAGCCAATGGAGGTTCTGTTTCCTCCCTCTTTACTGGAAAACCAAACGAAAGTTCTATTGCACTATGTGCACCAGACAACTCGTTATGAAGTAG ATGTTAATTTTCGAGAATAAGTCAGAAACTTCTAGAGATACACGGTTCTCCATATCCCCTCAAATTCCACGAAACTTCCTTCTCTTTCTCTATAAAAACATCAAAGCTCACAACTTCCCTGATCCTAGACTTTTCATCCAAAACCCAGAAAAGAAAACAACAAACAACAGCAGAAAGAAATCCCTCAGCCAGGAAAGCAAGAAGAACCTAAAGGAAGAGAAAAATATGTGTTTGGTATTTGTTTGCGATGAAGATCAGAGAGTATTATCAAGGCAACCAGCTCCAGGGGCATGCCCCTTCTGCGGAGGTATTATCCAAGCCACCGACATTGAAAGCCAATGGAGGTTCTGTTTCCTCCCTCTTTACTGGAAAACCAAACGAAAGTTCTATTGCACTATGTGCACCAGACAACTCGTTATGAAGTAG MLIFENKSETSRDTRFSISPQIPRNFLLFLYKNIKAHNFPDPRLFIQNPEKKTTNNSRKKSLSQESKKNLKEEKNMCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
BLAST of Lsi08G011260 vs. TrEMBL
Match: W9SK68_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019841 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 6.9e-28 Identity = 54/66 (81.82%), Postives = 63/66 (95.45%), Query Frame = 1
BLAST of Lsi08G011260 vs. TrEMBL
Match: A0A0D2TEV4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G067200 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.2e-26 Identity = 50/65 (76.92%), Postives = 62/65 (95.38%), Query Frame = 1
BLAST of Lsi08G011260 vs. TrEMBL
Match: B9T1K2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0216640 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.8e-26 Identity = 49/66 (74.24%), Postives = 64/66 (96.97%), Query Frame = 1
BLAST of Lsi08G011260 vs. TrEMBL
Match: A0A061GHB3_THECC (Methionyl-tRNA synthetase OS=Theobroma cacao GN=TCM_036826 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 8.4e-26 Identity = 49/66 (74.24%), Postives = 63/66 (95.45%), Query Frame = 1
BLAST of Lsi08G011260 vs. TrEMBL
Match: A0A0B2PRF2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_017872 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-25 Identity = 51/66 (77.27%), Postives = 61/66 (92.42%), Query Frame = 1
BLAST of Lsi08G011260 vs. TAIR10
Match: AT5G10695.1 (AT5G10695.1 unknown protein) HSP 1 Score: 99.4 bits (246), Expect = 1.9e-21 Identity = 38/65 (58.46%), Postives = 52/65 (80.00%), Query Frame = 1
BLAST of Lsi08G011260 vs. TAIR10
Match: AT5G57123.1 (AT5G57123.1 unknown protein) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19 Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 1
BLAST of Lsi08G011260 vs. TAIR10
Match: AT4G29905.1 (AT4G29905.1 unknown protein) HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1
BLAST of Lsi08G011260 vs. TAIR10
Match: AT1G52855.1 (AT1G52855.1 unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 1.7e-09 Identity = 21/59 (35.59%), Postives = 35/59 (59.32%), Query Frame = 1
BLAST of Lsi08G011260 vs. TAIR10
Match: AT3G15534.1 (AT3G15534.1 unknown protein) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07 Identity = 19/59 (32.20%), Postives = 34/59 (57.63%), Query Frame = 1
BLAST of Lsi08G011260 vs. NCBI nr
Match: gi|659088627|ref|XP_008445081.1| (PREDICTED: uncharacterized protein LOC103488227 [Cucumis melo]) HSP 1 Score: 146.4 bits (368), Expect = 3.9e-32 Identity = 62/66 (93.94%), Postives = 66/66 (100.00%), Query Frame = 1
BLAST of Lsi08G011260 vs. NCBI nr
Match: gi|449441998|ref|XP_004138769.1| (PREDICTED: uncharacterized protein LOC101206986 [Cucumis sativus]) HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31 Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of Lsi08G011260 vs. NCBI nr
Match: gi|1009174591|ref|XP_015868421.1| (PREDICTED: uncharacterized protein LOC107405842 [Ziziphus jujuba]) HSP 1 Score: 135.6 bits (340), Expect = 6.8e-29 Identity = 54/66 (81.82%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of Lsi08G011260 vs. NCBI nr
Match: gi|657972741|ref|XP_008378155.1| (PREDICTED: uncharacterized protein LOC103441232 [Malus domestica]) HSP 1 Score: 132.1 bits (331), Expect = 7.6e-28 Identity = 52/66 (78.79%), Postives = 64/66 (96.97%), Query Frame = 1
BLAST of Lsi08G011260 vs. NCBI nr
Match: gi|703158868|ref|XP_010112103.1| (hypothetical protein L484_019841 [Morus notabilis]) HSP 1 Score: 131.7 bits (330), Expect = 9.9e-28 Identity = 54/66 (81.82%), Postives = 63/66 (95.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |