CmoCh19G007850 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAACTCCCAAAACCCTAGCTAAAATAGCCCATAAGTGGCAGAAGGCGATGGTCTCCACCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCAAGGTGGCCGACAAGGGTCATTTTGTGGTCTACACATTGGACCATAAACGGTGCGTTTTGCCGATAAGCTATTTGGGGAACTATGTCTTAAGGGAGCTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCGGCGGATGGGCCAATAAAGCTGCCGTGTGAGGCGGCGTTTGTGGAGTATATTGTGTATTTGATTCGACGACATGTCGACTTCGAAGTGGAGAAGGCTCTGGTTCTGTCGGTTGCTCCGGCGGTGAAAGGCTGTTGTGGTTCTAATTTGTTCTCGTCGGCGGCAAGGGTGGCGGAAGCTGGCCGGCCGGTGATGATGGGGTTTGAGATTTGTATGGACCATACACAATTTTATTAAGGAATTTGGACTCCTACCGGTCATAATTGTTGGATGACGAAAGTCCCACGTCGGCTAATTTAGAGAATGTTCATCGGTTTATAATCAAAGAATACAATCTCCATTCAAATGAAATCTTTTAAGGAAATCCAAAGCAAAGTCACGAGAGCTTATATTCAAAATGTAGAAAGTCGTGTTCATTTAACAATAATTATAAGCTTATTTCATCGAGATATTCTATGTTTAAAAAATACTCATAAAATTGTTAATTTTTAAATATTTATATTTTTTAATAAATTTCAAAATATTTAACGATTTAAGTTATTTGACTTTTAACTTTGGTCAAAGTCAAGACAATTACCCCCATACCCTCCTAATTCCAACATCTCTTATTAA ATGGTAACTCCCAAAACCCTAGCTAAAATAGCCCATAAGTGGCAGAAGGCGATGGTCTCCACCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCAAGGTGGCCGACAAGGGTCATTTTGTGGTCTACACATTGGACCATAAACGGTGCGTTTTGCCGATAAGCTATTTGGGGAACTATGTCTTAAGGGAGCTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCGGCGGATGGGCCAATAAAGCTGCCGTGTGAGGCGGCGTTTGTGGAGTATATTGTGTATTTGATTCGACGACATGTCGACTTCGAAGTGGAGAAGGCTCTGGTTCTGTCGGTTGCTCCGGCGGTGAAAGGCTGTTGTGGTTCTAATTTGTTCTCGTCGGCGGCAAGGGTGGCGGAAGCTGGCCGGCCGTCAAGACAATTACCCCCATACCCTCCTAATTCCAACATCTCTTATTAA ATGGTAACTCCCAAAACCCTAGCTAAAATAGCCCATAAGTGGCAGAAGGCGATGGTCTCCACCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCAAGGTGGCCGACAAGGGTCATTTTGTGGTCTACACATTGGACCATAAACGGTGCGTTTTGCCGATAAGCTATTTGGGGAACTATGTCTTAAGGGAGCTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCGGCGGATGGGCCAATAAAGCTGCCGTGTGAGGCGGCGTTTGTGGAGTATATTGTGTATTTGATTCGACGACATGTCGACTTCGAAGTGGAGAAGGCTCTGGTTCTGTCGGTTGCTCCGGCGGTGAAAGGCTGTTGTGGTTCTAATTTGTTCTCGTCGGCGGCAAGGGTGGCGGAAGCTGGCCGGCCGTCAAGACAATTACCCCCATACCCTCCTAATTCCAACATCTCTTATTAA
BLAST of CmoCh19G007850 vs. Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24 Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of CmoCh19G007850 vs. Swiss-Prot
Match: SAU61_ARATH (Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana GN=SAUR61 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of CmoCh19G007850 vs. Swiss-Prot
Match: SAU62_ARATH (Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of CmoCh19G007850 vs. Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.8e-24 Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1
BLAST of CmoCh19G007850 vs. Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.9e-23 Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TrEMBL
Match: A0A0A0K2P5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018810 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53 Identity = 113/147 (76.87%), Postives = 123/147 (83.67%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TrEMBL
Match: A0A061E5H5_THECC (SAUR-like auxin-responsive protein family, putative OS=Theobroma cacao GN=TCM_006523 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 5.5e-29 Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TrEMBL
Match: A0A059ANA7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01253 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 9.3e-29 Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TrEMBL
Match: B9P5Y9_POPTR (Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0017s07100g PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28 Identity = 68/127 (53.54%), Postives = 94/127 (74.02%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TrEMBL
Match: F6I0U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03510 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-27 Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TAIR10
Match: AT1G29440.1 (AT1G29440.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25 Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TAIR10
Match: AT1G29420.1 (AT1G29420.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TAIR10
Match: AT1G29430.1 (AT1G29430.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TAIR10
Match: AT1G29510.1 (AT1G29510.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 3.3e-25 Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1
BLAST of CmoCh19G007850 vs. TAIR10
Match: AT1G29450.1 (AT1G29450.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24 Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1
BLAST of CmoCh19G007850 vs. NCBI nr
Match: gi|700188066|gb|KGN43299.1| (hypothetical protein Csa_7G018810 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53 Identity = 113/147 (76.87%), Postives = 123/147 (83.67%), Query Frame = 1
BLAST of CmoCh19G007850 vs. NCBI nr
Match: gi|778723154|ref|XP_004144931.2| (PREDICTED: auxin-induced protein 6B-like [Cucumis sativus]) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48 Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of CmoCh19G007850 vs. NCBI nr
Match: gi|590683862|ref|XP_007041697.1| (SAUR-like auxin-responsive protein family, putative [Theobroma cacao]) HSP 1 Score: 135.6 bits (340), Expect = 7.9e-29 Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 1
BLAST of CmoCh19G007850 vs. NCBI nr
Match: gi|629089080|gb|KCW55333.1| (hypothetical protein EUGRSUZ_I01253 [Eucalyptus grandis]) HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28 Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 1
BLAST of CmoCh19G007850 vs. NCBI nr
Match: gi|566211939|ref|XP_006373010.1| (auxin-responsive family protein [Populus trichocarpa]) HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28 Identity = 68/127 (53.54%), Postives = 94/127 (74.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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