MELO3C013302 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013302
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	SAUR-like auxin-responsive protein family, putative
Location	chr1 : 15192272 .. 15192718 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACTCCAAAAACCCTAGTTAAGCTAGCTCGTAAATGGCAGACGGTTGCCGTGGCCGGGAACGGGCAGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCTCTGTGGTAAACAAAGGTCATTTTGTGGTCTACACGGTGGACCAAAAACGGTGCGTTCTGCCCATAAGGTATTTGGGAAACTATGTTTTAAAGGAATTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCCGCGGATGGACCGATAAAGCTGCCGTGTGAGGCGGCGTTTATGGAGTATATCGTGTATTTGATCCAACGACATGTTGACCTTGAAGTCCAGCAAGCTCTGGTTTTGTCGGTTGCTCCAGCGATGAAATGCTCTTGTGATTCTAGTTTGTTTTCTTCGACGGCGCCGGTGGCTGAAAATGGCCGGCCGGTGATGATTTGTGGGTTTTGA

mRNA sequence

ATGGTAACTCCAAAAACCCTAGTTAAGCTAGCTCGTAAATGGCAGACGGTTGCCGTGGCCGGGAACGGGCAGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCTCTGTGGTAAACAAAGGTCATTTTGTGGTCTACACGGTGGACCAAAAACGGTGCGTTCTGCCCATAAGGTATTTGGGAAACTATGTTTTAAAGGAATTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCCGCGGATGGACCGATAAAGCTGCCGTGTGAGGCGGCGTTTATGGAGTATATCGTGTATTTGATCCAACGACATGTTGACCTTGAAGTCCAGCAAGCTCTGGTTTTGTCGGTTGCTCCAGCGATGAAATGCTCTTGTGATTCTAGTTTGTTTTCTTCGACGGCGCCGGTGGCTGAAAATGGCCGGCCGGTGATGATTTGTGGGTTTTGA

Coding sequence (CDS)

ATGGTAACTCCAAAAACCCTAGTTAAGCTAGCTCGTAAATGGCAGACGGTTGCCGTGGCCGGGAACGGGCAGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCTCTGTGGTAAACAAAGGTCATTTTGTGGTCTACACGGTGGACCAAAAACGGTGCGTTCTGCCCATAAGGTATTTGGGAAACTATGTTTTAAAGGAATTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCCGCGGATGGACCGATAAAGCTGCCGTGTGAGGCGGCGTTTATGGAGTATATCGTGTATTTGATCCAACGACATGTTGACCTTGAAGTCCAGCAAGCTCTGGTTTTGTCGGTTGCTCCAGCGATGAAATGCTCTTGTGATTCTAGTTTGTTTTCTTCGACGGCGCCGGTGGCTGAAAATGGCCGGCCGGTGATGATTTGTGGGTTTTGA

Protein sequence

MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVVNKGHFVVYTVDQKRCVLPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAPAMKCSCDSSLFSSTAPVAENGRPVMICGF*

Homology

[Close]

BLAST of MELO3C013302 vs. Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-27
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTR---SSSSVVNKGHFVVYTVDQKRCVLP 60
           M+  K L+K+A+KWQ  A     ++RIS  R+    SSSS V KG FVVYT D+ R   P
Sbjct: 2   MINAKKLMKMAKKWQQRAALH--RKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFP 61

Query: 61  IRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSV 120
           I YL N +++ELLK+SEEEFGLP +GPI LP ++ F+EY++ LIQR +D + ++AL++S+
Sbjct: 62  ISYLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSI 121

Query: 121 APAMKCSCDSSL 130
           + A KCS   SL
Sbjct: 122 SSA-KCSLQCSL 130

[Close]

BLAST of MELO3C013302 vs. Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 66/127 (51.97%), Postives = 89/127 (70.08%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTR---SSSSVVNKGHFVVYTVDQKRCVLP 60
           M+  K L+K+A+KWQ  A     ++RIS  R+    SSSS V KG FVVYT D+ R   P
Sbjct: 1   MINAKKLMKMAKKWQQRAALH--RKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFP 60

Query: 61  IRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSV 120
           I YL N V++ELLK+SEE+FGLP +GPI LP ++AF+EY+V LIQR +D + ++AL+LS+
Sbjct: 61  ISYLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSI 120

Query: 121 APAMKCS 125
           + A +CS
Sbjct: 121 SSA-RCS 124

[Close]

BLAST of MELO3C013302 vs. Swiss-Prot
Match: SAU62_ARATH (Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-26
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPR---TRSSSSVVNKGHFVVYTVDQKRCVLP 60
           M+  K L+KLA+KWQ  A     ++RIS  R   T SS + V KG FVVYT D+ R   P
Sbjct: 2   MINAKKLMKLAKKWQQRAALK--RKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFP 61

Query: 61  IRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSV 120
           + YL N +++ELLK+SEEEFGLP +GPI LP ++AF+EY++ LIQR +D + ++AL+LS+
Sbjct: 62  LSYLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSI 121

[Close]

BLAST of MELO3C013302 vs. Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25
Identity = 61/131 (46.56%), Postives = 85/131 (64.89%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRS--SSSVVNKGHFVVYTVDQKRCVLPI 60
           M+  K L+K+A+KWQ  A     ++RIS  R+ S  SS+   KG FVVYT D  R   P+
Sbjct: 1   MMNTKKLIKMAKKWQQRAALH--RKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPL 60

Query: 61  RYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVA 120
            YL N V +ELLK+SEEEFGLP  GPI  P ++ F+EY++ L+QR +D + ++AL++S++
Sbjct: 61  SYLSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSIS 120

Query: 121 PAMKCSCDSSL 130
            A +CS   SL
Sbjct: 121 SA-RCSSQCSL 128

[Close]

BLAST of MELO3C013302 vs. Swiss-Prot
Match: SAU61_ARATH (Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana GN=SAUR61 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24
Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPR---TRSSSSVVNKGHFVVYTVDQKRCVLP 60
           M+  K L+K+A+KWQ  A     ++RIS  R   T SSS+   KG FVVYT D+ R   P
Sbjct: 1   MMNTKKLLKMAKKWQQRAALR--RKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFP 60

Query: 61  IRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSV 120
           I YL N V++ELLK+SEEEFG+P +GPI LP ++ F+EY++ L+QR +D + ++AL+ S+
Sbjct: 61  ISYLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSI 120

Query: 121 AP---AMKCSCDSSLFSST 134
           +    ++ CS      SST
Sbjct: 121 SSTRCSLPCSFQLQEHSST 137

[Close]

BLAST of MELO3C013302 vs. TrEMBL
Match: A0A0A0K2P5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018810 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.3e-71
Identity = 135/148 (91.22%), Postives = 141/148 (95.27%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVVNKGHFVVYTVDQKRCVLPIRY 60
           MVTP+TL+KLARKWQ VAVAGNG+RRISLPRTRSSSSV NKGHFVVYTVDQKRCVLPIRY
Sbjct: 1   MVTPRTLLKLARKWQMVAVAGNGRRRISLPRTRSSSSVANKGHFVVYTVDQKRCVLPIRY 60

Query: 61  LGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAPA 120
           LGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLI+RHVD+EVQQALVLSV PA
Sbjct: 61  LGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIRRHVDIEVQQALVLSVVPA 120

Query: 121 MKCSCDSSLFSSTAPVAENGRPVMICGF 149
           +KC CDSS FSS APVAEN RPVMICGF
Sbjct: 121 VKCCCDSSSFSSAAPVAENDRPVMICGF 148

[Close]

BLAST of MELO3C013302 vs. TrEMBL
Match: A0A061E5H5_THECC (SAUR-like auxin-responsive protein family, putative OS=Theobroma cacao GN=TCM_006523 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 80/158 (50.63%), Postives = 104/158 (65.82%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRS----------SSSVVNKGHFVVYTVD 60
           M++PK L+++ARKWQ VA  G  ++RISLPR             SS V  KGHFVVYT D
Sbjct: 1   MISPKKLIEMARKWQRVAALG--RKRISLPRANRVANVNNSSDFSSEVAGKGHFVVYTAD 60

Query: 61  QKRCVLPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQ 120
           ++R V PI YL NY+++EL KMSEEEFGLP+DGPI LPC+AAFMEY V LIQR +D + Q
Sbjct: 61  ERRFVFPIAYLNNYIIQELFKMSEEEFGLPSDGPITLPCDAAFMEYAVSLIQRRIDRDTQ 120

Query: 121 QALVLSVAPAMKCSCDSSLFSSTAPVAENGRPVMICGF 149
           Q+L+LS+     C C  S       + +  + + +CGF
Sbjct: 121 QSLLLSMG---SCGCSLSF-----SLNQTSQQIPVCGF 148

[Close]

BLAST of MELO3C013302 vs. TrEMBL
Match: B9HR01_POPTR (Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0009s14300g PE=4 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-30
Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSS--------VVNKGHFVVYTVDQK 60
           M+TP  L+K+ARKWQ++A     ++RISL R  S++S        V +KGHFVVYT DQ+
Sbjct: 1   MITPVKLIKMARKWQSLAALK--RKRISLQRNHSNASTSSSNMPTVADKGHFVVYTADQR 60

Query: 61  RCVLPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQA 120
           R + PI YL N ++++LL MSEEEFGLP DGPI LPC+A FMEY+  LIQ  VD E+++A
Sbjct: 61  RFMFPISYLNNNIVRKLLVMSEEEFGLPGDGPITLPCDAVFMEYVCSLIQGRVDKEIEKA 120

Query: 121 LVLSVAPAMKCSCDS 128
           +++SV  +  CS  S
Sbjct: 121 MLMSVISSRSCSLSS 133

[Close]

BLAST of MELO3C013302 vs. TrEMBL
Match: A0A059AP50_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01488 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-30
Identity = 70/147 (47.62%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVV-NKGHFVVYTVDQKRCVLPIR 60
           M++PK LVK+ARKWQ VA     ++RIS PR      V+ ++GHF+VY++D KR + PIR
Sbjct: 79  MISPKRLVKIARKWQRVAAMR--RKRISFPRLDGDEEVIAHRGHFIVYSIDGKRFMFPIR 138

Query: 61  YLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAP 120
           YL N V++ELL++SE+EFGLP+ GPI LPC+A FM+Y+V LIQR  + E+++AL++S+  
Sbjct: 139 YLNNCVIRELLQLSEDEFGLPSSGPITLPCDAMFMDYMVSLIQRRANAEIEKALLMSIT- 198

Query: 121 AMKCSCDSSLFSSTAPVAENGRPVMIC 147
           A  CS   SL  +     + G+ +++C
Sbjct: 199 ANTCSLSHSLQQN-----QTGQQLLVC 217

[Close]

BLAST of MELO3C013302 vs. TrEMBL
Match: F6I0U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03510 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 74/156 (47.44%), Postives = 107/156 (68.59%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTR--------SSSSVVNKGHFVVYTVDQK 60
           M+ PK L+K+AR+WQ VA     ++RISLPRT         S+SSV +KGHFVVYT DQ+
Sbjct: 1   MINPKKLIKMAREWQKVAAIR--RKRISLPRTSQYLGAGHCSTSSVADKGHFVVYTADQR 60

Query: 61  RCVLPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQA 120
           R ++P+ YL + + +EL +MSEEEFGLP+DGPI LPC++ FMEYI++L+QR V   +++A
Sbjct: 61  RFMIPLVYLNSEIFRELFEMSEEEFGLPSDGPITLPCDSFFMEYILFLVQRGVAKNLEKA 120

Query: 121 LVLSVAPAMKCSCDSSLFSSTAPVAENGRPVMICGF 149
           L+ SVA        S++FS    +  N R +++C +
Sbjct: 121 LLTSVAHTQS---SSAIFSQQEQM--NSR-LLVCSY 148

[Close]

BLAST of MELO3C013302 vs. TAIR10
Match: AT1G29510.1 (AT1G29510.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-28
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTR---SSSSVVNKGHFVVYTVDQKRCVLP 60
           M+  K L+K+A+KWQ  A     ++RIS  R+    SSSS V KG FVVYT D+ R   P
Sbjct: 2   MINAKKLMKMAKKWQQRAALH--RKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFP 61

Query: 61  IRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSV 120
           I YL N +++ELLK+SEEEFGLP +GPI LP ++ F+EY++ LIQR +D + ++AL++S+
Sbjct: 62  ISYLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSI 121

Query: 121 APAMKCSCDSSL 130
           + A KCS   SL
Sbjct: 122 SSA-KCSLQCSL 130

[Close]

BLAST of MELO3C013302 vs. TAIR10
Match: AT1G29440.1 (AT1G29440.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 6.5e-28
Identity = 66/127 (51.97%), Postives = 89/127 (70.08%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTR---SSSSVVNKGHFVVYTVDQKRCVLP 60
           M+  K L+K+A+KWQ  A     ++RIS  R+    SSSS V KG FVVYT D+ R   P
Sbjct: 1   MINAKKLMKMAKKWQQRAALH--RKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFP 60

Query: 61  IRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSV 120
           I YL N V++ELLK+SEE+FGLP +GPI LP ++AF+EY+V LIQR +D + ++AL+LS+
Sbjct: 61  ISYLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSI 120

Query: 121 APAMKCS 125
           + A +CS
Sbjct: 121 SSA-RCS 124

[Close]

BLAST of MELO3C013302 vs. TAIR10
Match: AT1G29430.1 (AT1G29430.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-27
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPR---TRSSSSVVNKGHFVVYTVDQKRCVLP 60
           M+  K L+KLA+KWQ  A     ++RIS  R   T SS + V KG FVVYT D+ R   P
Sbjct: 2   MINAKKLMKLAKKWQQRAALK--RKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFP 61

Query: 61  IRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSV 120
           + YL N +++ELLK+SEEEFGLP +GPI LP ++AF+EY++ LIQR +D + ++AL+LS+
Sbjct: 62  LSYLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSI 121

[Close]

BLAST of MELO3C013302 vs. TAIR10
Match: AT1G29450.1 (AT1G29450.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26
Identity = 61/131 (46.56%), Postives = 85/131 (64.89%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRS--SSSVVNKGHFVVYTVDQKRCVLPI 60
           M+  K L+K+A+KWQ  A     ++RIS  R+ S  SS+   KG FVVYT D  R   P+
Sbjct: 1   MMNTKKLIKMAKKWQQRAALH--RKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPL 60

Query: 61  RYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVA 120
            YL N V +ELLK+SEEEFGLP  GPI  P ++ F+EY++ L+QR +D + ++AL++S++
Sbjct: 61  SYLSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSIS 120

Query: 121 PAMKCSCDSSL 130
            A +CS   SL
Sbjct: 121 SA-RCSSQCSL 128

[Close]

BLAST of MELO3C013302 vs. TAIR10
Match: AT5G27780.1 (AT5G27780.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26
Identity = 62/128 (48.44%), Postives = 86/128 (67.19%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPR----TRSSSSVVNKGHFVVYTVDQKRCVL 60
           M+  KTL+KLA+ WQ  A     ++RIS  R    T SS + V KG FVVYT D+ R   
Sbjct: 2   MINAKTLMKLAKTWQQRAALK--RKRISFQRSSITTTSSQTTVEKGCFVVYTADKIRFSF 61

Query: 61  PIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLS 120
           P+ YL N +++ELLK+SEEEFGLP +GPI LP ++ F+EY++ LIQR +D + ++AL+ S
Sbjct: 62  PLSYLSNTIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDEDTEKALLWS 121

Query: 121 VAPAMKCS 125
           ++ A +CS
Sbjct: 122 ISSA-RCS 126

[Close]

BLAST of MELO3C013302 vs. NCBI nr
Match: gi|700188066|gb|KGN43299.1| (hypothetical protein Csa_7G018810 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 7.6e-71
Identity = 135/148 (91.22%), Postives = 141/148 (95.27%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVVNKGHFVVYTVDQKRCVLPIRY 60
           MVTP+TL+KLARKWQ VAVAGNG+RRISLPRTRSSSSV NKGHFVVYTVDQKRCVLPIRY
Sbjct: 1   MVTPRTLLKLARKWQMVAVAGNGRRRISLPRTRSSSSVANKGHFVVYTVDQKRCVLPIRY 60

Query: 61  LGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAPA 120
           LGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLI+RHVD+EVQQALVLSV PA
Sbjct: 61  LGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIRRHVDIEVQQALVLSVVPA 120

Query: 121 MKCSCDSSLFSSTAPVAENGRPVMICGF 149
           +KC CDSS FSS APVAEN RPVMICGF
Sbjct: 121 VKCCCDSSSFSSAAPVAENDRPVMICGF 148

[Close]

BLAST of MELO3C013302 vs. NCBI nr
Match: gi|778723154|ref|XP_004144931.2| (PREDICTED: auxin-induced protein 6B-like [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-62
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 1


Query: 17  VAVAGNGQRRISLPRTRSSSSVVNKGHFVVYTVDQKRCVLPIRYLGNYVLKELLKMSEEE 76
           VAVAGNG+RRISLPRTRSSSSV NKGHFVVYTVDQKRCVLPIRYLGNYVLKELLKMSEEE
Sbjct: 2   VAVAGNGRRRISLPRTRSSSSVANKGHFVVYTVDQKRCVLPIRYLGNYVLKELLKMSEEE 61

Query: 77  FGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAPAMKCSCDSSLFSSTAPV 136
           FGLPADGPIKLPCEAAFMEYIVYLI+RHVD+EVQQALVLSV PA+KC CDSS FSS APV
Sbjct: 62  FGLPADGPIKLPCEAAFMEYIVYLIRRHVDIEVQQALVLSVVPAVKCCCDSSSFSSAAPV 121

Query: 137 AENGRPVMICGF 149
           AEN RPVMICGF
Sbjct: 122 AENDRPVMICGF 133

[Close]

BLAST of MELO3C013302 vs. NCBI nr
Match: gi|590683862|ref|XP_007041697.1| (SAUR-like auxin-responsive protein family, putative [Theobroma cacao])

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-34
Identity = 80/158 (50.63%), Postives = 104/158 (65.82%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRS----------SSSVVNKGHFVVYTVD 60
           M++PK L+++ARKWQ VA  G  ++RISLPR             SS V  KGHFVVYT D
Sbjct: 1   MISPKKLIEMARKWQRVAALG--RKRISLPRANRVANVNNSSDFSSEVAGKGHFVVYTAD 60

Query: 61  QKRCVLPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQ 120
           ++R V PI YL NY+++EL KMSEEEFGLP+DGPI LPC+AAFMEY V LIQR +D + Q
Sbjct: 61  ERRFVFPIAYLNNYIIQELFKMSEEEFGLPSDGPITLPCDAAFMEYAVSLIQRRIDRDTQ 120

Query: 121 QALVLSVAPAMKCSCDSSLFSSTAPVAENGRPVMICGF 149
           Q+L+LS+     C C  S       + +  + + +CGF
Sbjct: 121 QSLLLSMG---SCGCSLSF-----SLNQTSQQIPVCGF 148

[Close]

BLAST of MELO3C013302 vs. NCBI nr
Match: gi|566187948|ref|XP_002312928.2| (auxin-responsive family protein [Populus trichocarpa])

HSP 1 Score: 139.4 bits (350), Expect = 5.0e-30
Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSS--------VVNKGHFVVYTVDQK 60
           M+TP  L+K+ARKWQ++A     ++RISL R  S++S        V +KGHFVVYT DQ+
Sbjct: 1   MITPVKLIKMARKWQSLAALK--RKRISLQRNHSNASTSSSNMPTVADKGHFVVYTADQR 60

Query: 61  RCVLPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQA 120
           R + PI YL N ++++LL MSEEEFGLP DGPI LPC+A FMEY+  LIQ  VD E+++A
Sbjct: 61  RFMFPISYLNNNIVRKLLVMSEEEFGLPGDGPITLPCDAVFMEYVCSLIQGRVDKEIEKA 120

Query: 121 LVLSVAPAMKCSCDS 128
           +++SV  +  CS  S
Sbjct: 121 MLMSVISSRSCSLSS 133

[Close]

BLAST of MELO3C013302 vs. NCBI nr
Match: gi|629089370|gb|KCW55623.1| (hypothetical protein EUGRSUZ_I01488 [Eucalyptus grandis])

HSP 1 Score: 139.0 bits (349), Expect = 6.5e-30
Identity = 70/147 (47.62%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 1   MVTPKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVV-NKGHFVVYTVDQKRCVLPIR 60
           M++PK LVK+ARKWQ VA     ++RIS PR      V+ ++GHF+VY++D KR + PIR
Sbjct: 79  MISPKRLVKIARKWQRVAAMR--RKRISFPRLDGDEEVIAHRGHFIVYSIDGKRFMFPIR 138

Query: 61  YLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAP 120
           YL N V++ELL++SE+EFGLP+ GPI LPC+A FM+Y+V LIQR  + E+++AL++S+  
Sbjct: 139 YLNNCVIRELLQLSEDEFGLPSSGPITLPCDAMFMDYMVSLIQRRANAEIEKALLMSIT- 198

Query: 121 AMKCSCDSSLFSSTAPVAENGRPVMIC 147
           A  CS   SL  +     + G+ +++C
Sbjct: 199 ANTCSLSHSLQQN-----QTGQQLLVC 217

The following BLAST results are available for this feature:

BLAST of MELO3C013302 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU67_ARATH	4.0e-27	50.00	Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1	[more]
SAU63_ARATH	1.2e-26	51.97	Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1	[more]
SAU62_ARATH	7.5e-26	50.41	Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1	[more]
SAU64_ARATH	4.8e-25	46.56	Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1	[more]
SAU61_ARATH	1.1e-24	45.32	Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana GN=SAUR61 PE=2 SV=1	[more]

BLAST of MELO3C013302 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2P5_CUCSA	5.3e-71	91.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018810 PE=4 SV=1	[more]
A0A061E5H5_THECC	1.4e-34	50.63	SAUR-like auxin-responsive protein family, putative OS=Theobroma cacao GN=TCM_00...	[more]
B9HR01_POPTR	3.5e-30	51.85	Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0009s14300g PE=4...	[more]
A0A059AP50_EUCGR	4.6e-30	47.62	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01488 PE=4 SV=1	[more]
F6I0U0_VITVI	1.7e-29	47.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03510 PE=4 SV=...	[more]

BLAST of MELO3C013302 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29510.1	2.2e-28	50.00	SAUR-like auxin-responsive protein family	[more]
AT1G29440.1	6.5e-28	51.97	SAUR-like auxin-responsive protein family	[more]
AT1G29430.1	4.2e-27	50.41	SAUR-like auxin-responsive protein family	[more]
AT1G29450.1	2.7e-26	46.56	SAUR-like auxin-responsive protein family	[more]
AT5G27780.1	3.6e-26	48.44	SAUR-like auxin-responsive protein family	[more]

BLAST of MELO3C013302 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188066\|gb\|KGN43299.1\|	7.6e-71	91.22	hypothetical protein Csa_7G018810 [Cucumis sativus]	[more]
gi\|778723154\|ref\|XP_004144931.2\|	1.3e-62	92.42	PREDICTED: auxin-induced protein 6B-like [Cucumis sativus]	[more]
gi\|590683862\|ref\|XP_007041697.1\|	2.0e-34	50.63	SAUR-like auxin-responsive protein family, putative [Theobroma cacao]	[more]
gi\|566187948\|ref\|XP_002312928.2\|	5.0e-30	51.85	auxin-responsive family protein [Populus trichocarpa]	[more]
gi\|629089370\|gb\|KCW55623.1\|	6.5e-30	47.62	hypothetical protein EUGRSUZ_I01488 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0046620	regulation of organ growth
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013302T1	MELO3C013302T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 6..100 score: 8.1
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..148 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C013302	Csa7G018810	Cucumber (Chinese Long) v2	cumeB531
MELO3C013302	Cla015782	Watermelon (97103) v1	mewmB239
MELO3C013302	ClCG02G003650	Watermelon (Charleston Gray)	mewcgB196
MELO3C013302	Cla97C02G030440	Watermelon (97103) v2	mewmbB179
MELO3C013302	Bhi05G001403	Wax gourd	mewgoB213
MELO3C013302	CSPI07G01400	Wild cucumber (PI 183967)	cpimeB539
MELO3C013302	Cucsa.099290	Cucumber (Gy14) v1	cgymeB120
MELO3C013302	CmaCh11G013530	Cucurbita maxima (Rimu)	cmameB092
MELO3C013302	CmaCh19G007730	Cucurbita maxima (Rimu)	cmameB462
MELO3C013302	CmoCh11G017660	Cucurbita moschata (Rifu)	cmomeB091
MELO3C013302	CmoCh19G007850	Cucurbita moschata (Rifu)	cmomeB453
MELO3C013302	Lsi11G012470	Bottle gourd (USVL1VR-Ls)	lsimeB096
MELO3C013302	Cp4.1LG04g04620	Cucurbita pepo (Zucchini)	cpemeB610
MELO3C013302	CsGy7G001260	Cucumber (Gy14) v2	cgybmeB469
MELO3C013302	Carg26365	Silver-seed gourd	carmeB1016
MELO3C013302	Carg25745	Silver-seed gourd	carmeB1031
MELO3C013302	CsaV3_7G001480	Cucumber (Chinese Long) v3	cucmeB549

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013302	Silver-seed gourd	carmeB0354
MELO3C013302	Cucurbita maxima (Rimu)	cmameB511
MELO3C013302	Cucurbita maxima (Rimu)	cmameB565
MELO3C013302	Cucurbita moschata (Rifu)	cmomeB554
MELO3C013302	Cucurbita pepo (Zucchini)	cpemeB224
MELO3C013302	Cucurbita pepo (Zucchini)	cpemeB274