CmoCh19G007850.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G007850.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family, putative
Location	Cmo_Chr19 : 7868872 .. 7869735 (-)
Sequence length	489

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACTCCCAAAACCCTAGCTAAAATAGCCCATAAGTGGCAGAAGGCGATGGTCTCCACCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCAAGGTGGCCGACAAGGGTCATTTTGTGGTCTACACATTGGACCATAAACGGTGCGTTTTGCCGATAAGCTATTTGGGGAACTATGTCTTAAGGGAGCTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCGGCGGATGGGCCAATAAAGCTGCCGTGTGAGGCGGCGTTTGTGGAGTATATTGTGTATTTGATTCGACGACATGTCGACTTCGAAGTGGAGAAGGCTCTGGTTCTGTCGGTTGCTCCGGCGGTGAAAGGCTGTTGTGGTTCTAATTTGTTCTCGTCGGCGGCAAGGGTGGCGGAAGCTGGCCGGCCGGTGATGATGGGGTTTGAGATTTGTATGGACCATACACAATTTTATTAAGGAATTTGGACTCCTACCGGTCATAATTGTTGGATGACGAAAGTCCCACGTCGGCTAATTTAGAGAATGTTCATCGGTTTATAATCAAAGAATACAATCTCCATTCAAATGAAATCTTTTAAGGAAATCCAAAGCAAAGTCACGAGAGCTTATATTCAAAATGTAGAAAGTCGTGTTCATTTAACAATAATTATAAGCTTATTTCATCGAGATATTCTATGTTTAAAAAATACTCATAAAATTGTTAATTTTTAAATATTTATATTTTTTAATAAATTTCAAAATATTTAACGATTTAAGTTATTTGACTTTTAACTTTGGTCAAAGTCAAGACAATTACCCCCATACCCTCCTAATTCCAACATCTCTTATTAA

mRNA sequence

ATGGTAACTCCCAAAACCCTAGCTAAAATAGCCCATAAGTGGCAGAAGGCGATGGTCTCCACCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCAAGGTGGCCGACAAGGGTCATTTTGTGGTCTACACATTGGACCATAAACGGTGCGTTTTGCCGATAAGCTATTTGGGGAACTATGTCTTAAGGGAGCTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCGGCGGATGGGCCAATAAAGCTGCCGTGTGAGGCGGCGTTTGTGGAGTATATTGTGTATTTGATTCGACGACATGTCGACTTCGAAGTGGAGAAGGCTCTGGTTCTGTCGGTTGCTCCGGCGGTGAAAGGCTGTTGTGGTTCTAATTTGTTCTCGTCGGCGGCAAGGGTGGCGGAAGCTGGCCGGCCGTCAAGACAATTACCCCCATACCCTCCTAATTCCAACATCTCTTATTAA

Coding sequence (CDS)

ATGGTAACTCCCAAAACCCTAGCTAAAATAGCCCATAAGTGGCAGAAGGCGATGGTCTCCACCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGATCTCACTGCCAAGAACAAGAAGCTCCTCCAAGGTGGCCGACAAGGGTCATTTTGTGGTCTACACATTGGACCATAAACGGTGCGTTTTGCCGATAAGCTATTTGGGGAACTATGTCTTAAGGGAGCTGTTGAAGATGTCGGAGGAGGAGTTTGGGCTGCCGGCGGATGGGCCAATAAAGCTGCCGTGTGAGGCGGCGTTTGTGGAGTATATTGTGTATTTGATTCGACGACATGTCGACTTCGAAGTGGAGAAGGCTCTGGTTCTGTCGGTTGCTCCGGCGGTGAAAGGCTGTTGTGGTTCTAATTTGTTCTCGTCGGCGGCAAGGGTGGCGGAAGCTGGCCGGCCGTCAAGACAATTACCCCCATACCCTCCTAATTCCAACATCTCTTATTAA

Homology

[Close]

BLAST of CmoCh19G007850.1 vs. Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTR---SSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R    R+RIS  R+    SSS   +KG FVVYT D  
Sbjct: 1   MINAKKLMKMAKKWQQ-------RAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKI 60

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   PISYL N V++ELLK+SEE+FGLP +GPI LP ++AF+EY+V LI+R +D + EKA
Sbjct: 61  RFAFPISYLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKA 120

Query: 121 LVLSVAPA 126
           L+LS++ A
Sbjct: 121 LLLSISSA 121

[Close]

BLAST of CmoCh19G007850.1 vs. Swiss-Prot
Match: SAU61_ARATH (Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana GN=SAUR61 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPR---TRSSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R   RR+RIS  R   T SSS  A+KG FVVYT D  
Sbjct: 1   MMNTKKLLKMAKKWQQ-------RAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRI 60

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   PISYL N V++ELLK+SEEEFG+P +GPI LP ++ F+EY++ L++R +D + EKA
Sbjct: 61  RFAFPISYLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKA 119

Query: 121 LVLSVA 124
           L+ S++
Sbjct: 121 LITSIS 119

[Close]

BLAST of CmoCh19G007850.1 vs. Swiss-Prot
Match: SAU62_ARATH (Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPR---TRSSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R   +R+RIS  R   T SS    +KG FVVYT D  
Sbjct: 2   MINAKKLMKLAKKWQQ-------RAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKI 61

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   P+SYL N +++ELLK+SEEEFGLP +GPI LP ++AF+EY++ LI+R +D + EKA
Sbjct: 62  RFSFPLSYLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKA 121

Query: 121 LVLSVAPA 126
           L+LS++ A
Sbjct: 122 LLLSISSA 122

[Close]

BLAST of CmoCh19G007850.1 vs. Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.8e-24
Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTR---SSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R    R+RIS  R+    SSS   +KG FVVYT D  
Sbjct: 2   MINAKKLMKMAKKWQQ-------RAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKI 61

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   PISYL N +++ELLK+SEEEFGLP +GPI LP ++ F+EY++ LI+R +D + EKA
Sbjct: 62  RFAFPISYLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKA 121

Query: 121 LVLSVAPA 126
           L++S++ A
Sbjct: 122 LLMSISSA 122

[Close]

BLAST of CmoCh19G007850.1 vs. Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.9e-23
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRS--SSKVADKGHFVVYTLDHKR 60
           M+  K L K+A KWQ+       R    R+RIS  R+ S  SS  A+KG FVVYT D  R
Sbjct: 1   MMNTKKLIKMAKKWQQ-------RAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTR 60

Query: 61  CVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKAL 120
              P+SYL N V +ELLK+SEEEFGLP  GPI  P ++ F+EY++ L++R +D + EKAL
Sbjct: 61  FAFPLSYLSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKAL 120

Query: 121 VLSVAPA 126
           ++S++ A
Sbjct: 121 LMSISSA 120

[Close]

BLAST of CmoCh19G007850.1 vs. TrEMBL
Match: A0A0A0K2P5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018810 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 113/147 (76.87%), Postives = 123/147 (83.67%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRSSSKVADKGHFVVYTLDHKRCV 60
           MVTP+TL K+A KWQ   V+   RRR     ISLPRTRSSS VA+KGHFVVYT+D KRCV
Sbjct: 1   MVTPRTLLKLARKWQMVAVAGNGRRR-----ISLPRTRSSSSVANKGHFVVYTVDQKRCV 60

Query: 61  LPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKALVL 120
           LPI YLGNYVL+ELLKMSEEEFGLPADGPIKLPCEAAF+EYIVYLIRRHVD EV++ALVL
Sbjct: 61  LPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIRRHVDIEVQQALVL 120

Query: 121 SVAPAVKGCCGSNLFSSAARVAEAGRP 148
           SV PAVK CC S+ FSSAA VAE  RP
Sbjct: 121 SVVPAVKCCCDSSSFSSAAPVAENDRP 142

[Close]

BLAST of CmoCh19G007850.1 vs. TrEMBL
Match: A0A061E5H5_THECC (SAUR-like auxin-responsive protein family, putative OS=Theobroma cacao GN=TCM_006523 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.5e-29
Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRS----------SSKVADKGHFV 60
           M++PK L ++A KWQ+ + + GR+R      ISLPR             SS+VA KGHFV
Sbjct: 1   MISPKKLIEMARKWQR-VAALGRKR------ISLPRANRVANVNNSSDFSSEVAGKGHFV 60

Query: 61  VYTLDHKRCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHV 120
           VYT D +R V PI+YL NY+++EL KMSEEEFGLP+DGPI LPC+AAF+EY V LI+R +
Sbjct: 61  VYTADERRFVFPIAYLNNYIIQELFKMSEEEFGLPSDGPITLPCDAAFMEYAVSLIQRRI 120

Query: 121 DFEVEKALVLSVAPAVKGCCGSNLFSSAARVAE 144
           D + +++L+LS+     G CG +L  S  + ++
Sbjct: 121 DRDTQQSLLLSM-----GSCGCSLSFSLNQTSQ 141

[Close]

BLAST of CmoCh19G007850.1 vs. TrEMBL
Match: A0A059ANA7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01253 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.3e-29
Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRSSSKV-ADKGHFVVYTLDHKRC 60
           M++PK L KIA KWQ+           RR+RIS P+     +V A +GHFVVY++D KR 
Sbjct: 1   MISPKHLIKIARKWQRVAAM-------RRKRISFPQVEGDKEVLAHRGHFVVYSIDRKRF 60

Query: 61  VLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKALV 120
           V P+SYL N V+REL K+SEEEFGLP++GPI LPC+A F++Y V +IRRH + E+EKAL+
Sbjct: 61  VFPMSYLNNCVIRELFKLSEEEFGLPSNGPITLPCDAMFIDYAVSMIRRHSNVEIEKALL 116

Query: 121 LSV 123
           LS+
Sbjct: 121 LSI 116

[Close]

BLAST of CmoCh19G007850.1 vs. TrEMBL
Match: B9P5Y9_POPTR (Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0017s07100g PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28
Identity = 68/127 (53.54%), Postives = 94/127 (74.02%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTR----SSSKVADKGHFVVYTLDH 60
           M++ K L K+A KWQK           RR+RI+LP+      S+S++ADKGHFVVY+ DH
Sbjct: 1   MISAKKLVKLAKKWQKLAAL-------RRKRITLPQMETSSCSASEMADKGHFVVYSADH 60

Query: 61  KRCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEK 120
           KR +LP+SYL N ++RELLK++EEEFGLP+DGP+ LPC+A  +EY V LI++ V  +VEK
Sbjct: 61  KRFLLPLSYLNNEIVRELLKLAEEEFGLPSDGPLTLPCDAELIEYAVALIKQRVTRDVEK 120

Query: 121 ALVLSVA 124
           AL++S+A
Sbjct: 121 ALLVSIA 120

[Close]

BLAST of CmoCh19G007850.1 vs. TrEMBL
Match: F6I0U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03510 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-27
Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTR--------SSSKVADKGHFVVY 60
           M+ PK L K+A +WQK           RR+RISLPRT         S+S VADKGHFVVY
Sbjct: 1   MINPKKLIKMAREWQKVAAI-------RRKRISLPRTSQYLGAGHCSTSSVADKGHFVVY 60

Query: 61  TLDHKRCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDF 120
           T D +R ++P+ YL + + REL +MSEEEFGLP+DGPI LPC++ F+EYI++L++R V  
Sbjct: 61  TADQRRFMIPLVYLNSEIFRELFEMSEEEFGLPSDGPITLPCDSFFMEYILFLVQRGVAK 120

Query: 121 EVEKALVLSVA 124
            +EKAL+ SVA
Sbjct: 121 NLEKALLTSVA 124

[Close]

BLAST of CmoCh19G007850.1 vs. TAIR10
Match: AT1G29440.1 (AT1G29440.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTR---SSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R    R+RIS  R+    SSS   +KG FVVYT D  
Sbjct: 1   MINAKKLMKMAKKWQQ-------RAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKI 60

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   PISYL N V++ELLK+SEE+FGLP +GPI LP ++AF+EY+V LI+R +D + EKA
Sbjct: 61  RFAFPISYLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKA 120

Query: 121 LVLSVAPA 126
           L+LS++ A
Sbjct: 121 LLLSISSA 121

[Close]

BLAST of CmoCh19G007850.1 vs. TAIR10
Match: AT1G29420.1 (AT1G29420.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPR---TRSSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R   RR+RIS  R   T SSS  A+KG FVVYT D  
Sbjct: 1   MMNTKKLLKMAKKWQQ-------RAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRI 60

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   PISYL N V++ELLK+SEEEFG+P +GPI LP ++ F+EY++ L++R +D + EKA
Sbjct: 61  RFAFPISYLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKA 119

Query: 121 LVLSVA 124
           L+ S++
Sbjct: 121 LITSIS 119

[Close]

BLAST of CmoCh19G007850.1 vs. TAIR10
Match: AT1G29430.1 (AT1G29430.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPR---TRSSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R   +R+RIS  R   T SS    +KG FVVYT D  
Sbjct: 2   MINAKKLMKLAKKWQQ-------RAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKI 61

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   P+SYL N +++ELLK+SEEEFGLP +GPI LP ++AF+EY++ LI+R +D + EKA
Sbjct: 62  RFSFPLSYLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKA 121

Query: 121 LVLSVAPA 126
           L+LS++ A
Sbjct: 122 LLLSISSA 122

[Close]

BLAST of CmoCh19G007850.1 vs. TAIR10
Match: AT1G29510.1 (AT1G29510.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-25
Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTR---SSSKVADKGHFVVYTLDHK 60
           M+  K L K+A KWQ+       R    R+RIS  R+    SSS   +KG FVVYT D  
Sbjct: 2   MINAKKLMKMAKKWQQ-------RAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKI 61

Query: 61  RCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKA 120
           R   PISYL N +++ELLK+SEEEFGLP +GPI LP ++ F+EY++ LI+R +D + EKA
Sbjct: 62  RFAFPISYLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKA 121

Query: 121 LVLSVAPA 126
           L++S++ A
Sbjct: 122 LLMSISSA 122

[Close]

BLAST of CmoCh19G007850.1 vs. TAIR10
Match: AT1G29450.1 (AT1G29450.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRS--SSKVADKGHFVVYTLDHKR 60
           M+  K L K+A KWQ+       R    R+RIS  R+ S  SS  A+KG FVVYT D  R
Sbjct: 1   MMNTKKLIKMAKKWQQ-------RAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTR 60

Query: 61  CVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKAL 120
              P+SYL N V +ELLK+SEEEFGLP  GPI  P ++ F+EY++ L++R +D + EKAL
Sbjct: 61  FAFPLSYLSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKAL 120

Query: 121 VLSVAPA 126
           ++S++ A
Sbjct: 121 LMSISSA 120

[Close]

BLAST of CmoCh19G007850.1 vs. NCBI nr
Match: gi|700188066|gb|KGN43299.1| (hypothetical protein Csa_7G018810 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53
Identity = 113/147 (76.87%), Postives = 123/147 (83.67%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRSSSKVADKGHFVVYTLDHKRCV 60
           MVTP+TL K+A KWQ   V+   RRR     ISLPRTRSSS VA+KGHFVVYT+D KRCV
Sbjct: 1   MVTPRTLLKLARKWQMVAVAGNGRRR-----ISLPRTRSSSSVANKGHFVVYTVDQKRCV 60

Query: 61  LPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKALVL 120
           LPI YLGNYVL+ELLKMSEEEFGLPADGPIKLPCEAAF+EYIVYLIRRHVD EV++ALVL
Sbjct: 61  LPIRYLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIRRHVDIEVQQALVL 120

Query: 121 SVAPAVKGCCGSNLFSSAARVAEAGRP 148
           SV PAVK CC S+ FSSAA VAE  RP
Sbjct: 121 SVVPAVKCCCDSSSFSSAAPVAENDRP 142

[Close]

BLAST of CmoCh19G007850.1 vs. NCBI nr
Match: gi|778723154|ref|XP_004144931.2| (PREDICTED: auxin-induced protein 6B-like [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48
Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 1


Query: 29  RRRISLPRTRSSSKVADKGHFVVYTLDHKRCVLPISYLGNYVLRELLKMSEEEFGLPADG 88
           RRRISLPRTRSSS VA+KGHFVVYT+D KRCVLPI YLGNYVL+ELLKMSEEEFGLPADG
Sbjct: 9   RRRISLPRTRSSSSVANKGHFVVYTVDQKRCVLPIRYLGNYVLKELLKMSEEEFGLPADG 68

Query: 89  PIKLPCEAAFVEYIVYLIRRHVDFEVEKALVLSVAPAVKGCCGSNLFSSAARVAEAGRP 148
           PIKLPCEAAF+EYIVYLIRRHVD EV++ALVLSV PAVK CC S+ FSSAA VAE  RP
Sbjct: 69  PIKLPCEAAFMEYIVYLIRRHVDIEVQQALVLSVVPAVKCCCDSSSFSSAAPVAENDRP 127

[Close]

BLAST of CmoCh19G007850.1 vs. NCBI nr
Match: gi|590683862|ref|XP_007041697.1| (SAUR-like auxin-responsive protein family, putative [Theobroma cacao])

HSP 1 Score: 135.6 bits (340), Expect = 7.9e-29
Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRS----------SSKVADKGHFV 60
           M++PK L ++A KWQ+ + + GR+R      ISLPR             SS+VA KGHFV
Sbjct: 1   MISPKKLIEMARKWQR-VAALGRKR------ISLPRANRVANVNNSSDFSSEVAGKGHFV 60

Query: 61  VYTLDHKRCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHV 120
           VYT D +R V PI+YL NY+++EL KMSEEEFGLP+DGPI LPC+AAF+EY V LI+R +
Sbjct: 61  VYTADERRFVFPIAYLNNYIIQELFKMSEEEFGLPSDGPITLPCDAAFMEYAVSLIQRRI 120

Query: 121 DFEVEKALVLSVAPAVKGCCGSNLFSSAARVAE 144
           D + +++L+LS+     G CG +L  S  + ++
Sbjct: 121 DRDTQQSLLLSM-----GSCGCSLSFSLNQTSQ 141

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BLAST of CmoCh19G007850.1 vs. NCBI nr
Match: gi|629089080|gb|KCW55333.1| (hypothetical protein EUGRSUZ_I01253 [Eucalyptus grandis])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTRSSSKV-ADKGHFVVYTLDHKRC 60
           M++PK L KIA KWQ+           RR+RIS P+     +V A +GHFVVY++D KR 
Sbjct: 1   MISPKHLIKIARKWQRVAAM-------RRKRISFPQVEGDKEVLAHRGHFVVYSIDRKRF 60

Query: 61  VLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEKALV 120
           V P+SYL N V+REL K+SEEEFGLP++GPI LPC+A F++Y V +IRRH + E+EKAL+
Sbjct: 61  VFPMSYLNNCVIRELFKLSEEEFGLPSNGPITLPCDAMFIDYAVSMIRRHSNVEIEKALL 116

Query: 121 LSV 123
           LS+
Sbjct: 121 LSI 116

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BLAST of CmoCh19G007850.1 vs. NCBI nr
Match: gi|566211939|ref|XP_006373010.1| (auxin-responsive family protein [Populus trichocarpa])

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 68/127 (53.54%), Postives = 94/127 (74.02%), Query Frame = 1


Query: 1   MVTPKTLAKIAHKWQKAMVSTGRRRRRRRRRISLPRTR----SSSKVADKGHFVVYTLDH 60
           M++ K L K+A KWQK           RR+RI+LP+      S+S++ADKGHFVVY+ DH
Sbjct: 1   MISAKKLVKLAKKWQKLAAL-------RRKRITLPQMETSSCSASEMADKGHFVVYSADH 60

Query: 61  KRCVLPISYLGNYVLRELLKMSEEEFGLPADGPIKLPCEAAFVEYIVYLIRRHVDFEVEK 120
           KR +LP+SYL N ++RELLK++EEEFGLP+DGP+ LPC+A  +EY V LI++ V  +VEK
Sbjct: 61  KRFLLPLSYLNNEIVRELLKLAEEEFGLPSDGPLTLPCDAELIEYAVALIKQRVTRDVEK 120

Query: 121 ALVLSVA 124
           AL++S+A
Sbjct: 121 ALLVSIA 120

The following BLAST results are available for this feature:

BLAST of CmoCh19G007850.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU63_ARATH	2.0e-24	50.78	Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1	[more]
SAU61_ARATH	2.6e-24	50.00	Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana GN=SAUR61 PE=2 SV=1	[more]
SAU62_ARATH	2.6e-24	49.22	Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1	[more]
SAU67_ARATH	5.8e-24	48.44	Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1	[more]
SAU64_ARATH	4.9e-23	48.03	Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1	[more]

BLAST of CmoCh19G007850.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2P5_CUCSA	1.1e-53	76.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018810 PE=4 SV=1	[more]
A0A061E5H5_THECC	5.5e-29	48.37	SAUR-like auxin-responsive protein family, putative OS=Theobroma cacao GN=TCM_00...	[more]
A0A059ANA7_EUCGR	9.3e-29	54.47	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01253 PE=4 SV=1	[more]
B9P5Y9_POPTR	1.2e-28	53.54	Auxin-responsive family protein OS=Populus trichocarpa GN=POPTR_0017s07100g PE=4...	[more]
F6I0U0_VITVI	1.0e-27	52.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03510 PE=4 SV=...	[more]

BLAST of CmoCh19G007850.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29440.1	1.1e-25	50.78	SAUR-like auxin-responsive protein family	[more]
AT1G29420.1	1.5e-25	50.00	SAUR-like auxin-responsive protein family	[more]
AT1G29430.1	1.5e-25	49.22	SAUR-like auxin-responsive protein family	[more]
AT1G29510.1	3.3e-25	48.44	SAUR-like auxin-responsive protein family	[more]
AT1G29450.1	2.8e-24	48.03	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh19G007850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188066\|gb\|KGN43299.1\|	1.6e-53	76.87	hypothetical protein Csa_7G018810 [Cucumis sativus]	[more]
gi\|778723154\|ref\|XP_004144931.2\|	1.2e-48	84.87	PREDICTED: auxin-induced protein 6B-like [Cucumis sativus]	[more]
gi\|590683862\|ref\|XP_007041697.1\|	7.9e-29	48.37	SAUR-like auxin-responsive protein family, putative [Theobroma cacao]	[more]
gi\|629089080\|gb\|KCW55333.1\|	1.3e-28	54.47	hypothetical protein EUGRSUZ_I01253 [Eucalyptus grandis]	[more]
gi\|566211939\|ref\|XP_006373010.1\|	1.8e-28	53.54	auxin-responsive family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh19G007850	CmoCh19G007850	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh19G007850.1	CmoCh19G007850.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G007850.1.CDS.2	CmoCh19G007850.1.CDS.2	CDS
CmoCh19G007850.1.CDS.1	CmoCh19G007850.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G007850.1.exon.2	CmoCh19G007850.1.exon.2	exon
CmoCh19G007850.1.exon.1	CmoCh19G007850.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 7..105 score: 6.5
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..123 score: 4.0