CmoCh15G011380 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G011380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEmbryo defective 1923
LocationCmo_Chr15 : 7947234 .. 7949776 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCCATGTTATACCCAAATTCCTCGTTTAGCTATCGAATTCATCAGTCATGGCGACTGCACTTATCGCCGGCCTTTCTTCAACCCTAAAACTTCCTCTTCTCACAGCAATTTCATCTTCCCCTTTAAACTTTCGACCTAAAAGCCAAAACGTTCAATTTTGTAGCTCCCCTTGCAAAATTCACACCATTTGGAACAAACCCACAAGAAATTGCAATGTGTTATCGCATAATCTAAGTGGGTTTCTAATTTCGAGGAGCTTGGGACCTTTCACTGTCTCTGCCGGAGCTGTTGAACCTCAGAATGATGATAGAGAGGAGGGTACTATGCCGGAACGGTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTGTGAGGTGGCCTTTCTTCGTCGGTAAATTCTTCTACTCGTTTACAATTTGTTTTTCATAGATGTTTTGGACGTTTAAGAATCATTTCTGTTCTTGGTTTGTTTAATTTTACCACTTAGTTTCAGTATAATCTTCAAACTTGTTAGTGGGTTTTGCGATTGTTGTTGAATTCAGGGTAGAAAAGATTGCCTAACTTTGTTGATAATCTTGGAATTTTTGTTATTGTAACAAGAACAGCTGTATCTGTCATAGTTTCTAAGCTCTGTAGTTTTGAATTTCATTGCATAGGTTAAGGTGCTGTTTGTTATCCTATGGCATAATAATAGGATCTTGAGACAGGTTGAGAGGTCATATGGGAGGTAGCTAGGCTTAGTACCTCCCCATGAACTTCATTCACTAGGCCTTACCGAATGAAGTTATTAGGACGGAGACTAATCGGTATGTGTTTGAAACTTGGACACTGATTGTGAGATCCCACGTTAGTTGGAGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAATCTCTCTTTAGTAGGCGGGTTTTAAAAACCTTGAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGGTGTTACAAACGATATCAGAGCTAGACACCGAGCAATGTGCTAGTGAGGAGGCTGAACCTTGAAGGGGGTGGACACGAGGTGGTGTGCCAGCAAGGACGCTGGGTCCCCGAAGGGGGGTGGATTATGAGATCCCACATCGGTTTGGGAGAAAAACGAAACATTTTTTTATAAAGGTGTGGAAACCTCTCCCTAGTAGACGCATTTTAAAAACATTGAGGGAAATCCCAAAGAGGACAATATCTGCTAGAGGTGGCCTTGAGACAATACAAATAGTATCAGAGCCAGACACTGGGCGATGTGCGAGGAGGTTGAACCCCGAAAGGAGTGGACACGAGGTAGTGTGCCAGCAAGGGCGCTGAACTCGAAGGGGGGTAGAGAGATCCCACATTGGTTTAGAGAAGAACGAAATATTCTTTATAAGAGTGTTGAAACCAATCCCTACGCGTTTTAAAAATCTTGAGGGAAAGCCCAAAAAGGACACCGGGTGATGTGCGAGGAGAGAGTTTTGTGTCTTTAAATCATTTATGATATACTGAATGCATATTCTTAGTAATGTATTTGTATCATATTCATTACAATTCCTTTCTGAAGAGAAAAAAAGACAACATTAGCAGCTTATTCTTGAGCGTCGTCCTCTGTTCTTAATCATAATAATTCAACCCGACATAAATTCTTGAGTTCATTGTCTTTTAATACGATCGATCTCGTTATCGAAAGATGAATTACTGTTAATTACCTTTGGTTATAATGCAGCTCTTGCATTTATTCTCTATGCTTGGAAAGCAGTCTTTTTTGAACTTGGTAACTGGAGAAAGGCTGTTCTTTGCATCTTCAATTTTGTGGGATACATATTAAAAGGTGCCTTAGCTCTCATCCTCTATGTTATTGGAGATCCCATCACTTCTATGATAAGAGGAATCGAGACGACATTCTACACGATTCGATCTTTCTACTCGAGTGTAGTTGCATACGCACCCGTTCCCGAGCTAACCACACTAATCATCCTAGCCTCAACCGTGGTTGCAATCTCAGAAGCCAGTGTCCCTGATTCCGTTAGCACTCAACCATATCTTCTAACACTATCAGGGCTTGCTAGCTACGCAGCCGTGCGAGCGTACATTTCCGAGCCATTCTTCTGGACGATTCTGTTGGGAGTTTACAGTTTCTCGAAGTTCGTGAAGAAGAGAGACGACGTAACGTCTGCGCTGCCTGCTGCTGCTGTGTTTGCTGCCATTGGTGAGCCATGGGTTAGGATTTTGGCTATGGGTTCGTTTATGGGTCTGGCTATTTGGCACCATTGGAAGAAGGTTTCACAAGGAAAGGAAAGGGAAGAGGGTGTGTATGAGAGGGATGTTCCGGTGCCTCTTTTGGGTGCGGCTTTGGCTATTGGGATCCATGCGGCGGCCAAATGGGCTGGTTATAGGCACTTGACATGGATGATTGTATGAATATAAAGGCTAGCTTTTGATTTGAGAGATGATTTTAGAAGAACCCTCTTATTTATCATTTGATTTATATTTTGAATCTTTAGTCTTTTGTTTTATAACCACAAATTCATACATTAATTT

mRNA sequence

AATCCATGTTATACCCAAATTCCTCGTTTAGCTATCGAATTCATCAGTCATGGCGACTGCACTTATCGCCGGCCTTTCTTCAACCCTAAAACTTCCTCTTCTCACAGCAATTTCATCTTCCCCTTTAAACTTTCGACCTAAAAGCCAAAACGTTCAATTTTGTAGCTCCCCTTGCAAAATTCACACCATTTGGAACAAACCCACAAGAAATTGCAATGTGTTATCGCATAATCTAAGTGGGTTTCTAATTTCGAGGAGCTTGGGACCTTTCACTGTCTCTGCCGGAGCTGTTGAACCTCAGAATGATGATAGAGAGGAGGGTACTATGCCGGAACGGTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTGTGAGGTGGCCTTTCTTCGTCGCTCTTGCATTTATTCTCTATGCTTGGAAAGCAGTCTTTTTTGAACTTGGTAACTGGAGAAAGGCTGTTCTTTGCATCTTCAATTTTGTGGGATACATATTAAAAGGTGCCTTAGCTCTCATCCTCTATGTTATTGGAGATCCCATCACTTCTATGATAAGAGGAATCGAGACGACATTCTACACGATTCGATCTTTCTACTCGAGTGTAGTTGCATACGCACCCGTTCCCGAGCTAACCACACTAATCATCCTAGCCTCAACCGTGGTTGCAATCTCAGAAGCCAGTGTCCCTGATTCCGTTAGCACTCAACCATATCTTCTAACACTATCAGGGCTTGCTAGCTACGCAGCCGTGCGAGCGTACATTTCCGAGCCATTCTTCTGGACGATTCTGTTGGGAGTTTACAGTTTCTCGAAGTTCGTGAAGAAGAGAGACGACGTAACGTCTGCGCTGCCTGCTGCTGCTGTGTTTGCTGCCATTGGTGAGCCATGGGTTAGGATTTTGGCTATGGGTTCGTTTATGGGTCTGGCTATTTGGCACCATTGGAAGAAGGTTTCACAAGGAAAGGAAAGGGAAGAGGGTGTGTATGAGAGGGATGTTCCGGTGCCTCTTTTGGGTGCGGCTTTGGCTATTGGGATCCATGCGGCGGCCAAATGGGCTGGTTATAGGCACTTGACATGGATGATTGTATGAATATAAAGGCTAGCTTTTGATTTGAGAGATGATTTTAGAAGAACCCTCTTATTTATCATTTGATTTATATTTTGAATCTTTAGTCTTTTGTTTTATAACCACAAATTCATACATTAATTT

Coding sequence (CDS)

ATGGCGACTGCACTTATCGCCGGCCTTTCTTCAACCCTAAAACTTCCTCTTCTCACAGCAATTTCATCTTCCCCTTTAAACTTTCGACCTAAAAGCCAAAACGTTCAATTTTGTAGCTCCCCTTGCAAAATTCACACCATTTGGAACAAACCCACAAGAAATTGCAATGTGTTATCGCATAATCTAAGTGGGTTTCTAATTTCGAGGAGCTTGGGACCTTTCACTGTCTCTGCCGGAGCTGTTGAACCTCAGAATGATGATAGAGAGGAGGGTACTATGCCGGAACGGTTCAGGTACTTGACCAAAGAAGCTCCTGATCCTCCTGTGAGGTGGCCTTTCTTCGTCGCTCTTGCATTTATTCTCTATGCTTGGAAAGCAGTCTTTTTTGAACTTGGTAACTGGAGAAAGGCTGTTCTTTGCATCTTCAATTTTGTGGGATACATATTAAAAGGTGCCTTAGCTCTCATCCTCTATGTTATTGGAGATCCCATCACTTCTATGATAAGAGGAATCGAGACGACATTCTACACGATTCGATCTTTCTACTCGAGTGTAGTTGCATACGCACCCGTTCCCGAGCTAACCACACTAATCATCCTAGCCTCAACCGTGGTTGCAATCTCAGAAGCCAGTGTCCCTGATTCCGTTAGCACTCAACCATATCTTCTAACACTATCAGGGCTTGCTAGCTACGCAGCCGTGCGAGCGTACATTTCCGAGCCATTCTTCTGGACGATTCTGTTGGGAGTTTACAGTTTCTCGAAGTTCGTGAAGAAGAGAGACGACGTAACGTCTGCGCTGCCTGCTGCTGCTGTGTTTGCTGCCATTGGTGAGCCATGGGTTAGGATTTTGGCTATGGGTTCGTTTATGGGTCTGGCTATTTGGCACCATTGGAAGAAGGTTTCACAAGGAAAGGAAAGGGAAGAGGGTGTGTATGAGAGGGATGTTCCGGTGCCTCTTTTGGGTGCGGCTTTGGCTATTGGGATCCATGCGGCGGCCAAATGGGCTGGTTATAGGCACTTGACATGGATGATTGTATGA
Homology
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BLAST of CmoCh15G011380 vs. TrEMBL
Match: A0A0A0KM42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141030 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.1e-142
Identity = 268/349 (76.79%), Postives = 294/349 (84.24%), Query Frame = 1 

Query: 1   MATALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSH 60
           MAT LIA LSS LKLPLL+AISSSP  FR ++Q V F +SP  I T+W  PTRNCNV+SH
Sbjct: 1   MATTLIASLSSNLKLPLLSAISSSPSTFRRQTQTVPFSNSP--IQTLWLNPTRNCNVISH 60

Query: 61  NLSGFLISRSLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
           N SGFLISR L  FTV A   E Q+DDREE TMPERFRYL KE  DPPVRWPFFVAL F+
Sbjct: 61  NRSGFLISRKLESFTVFAADFEAQSDDREESTMPERFRYLAKEGSDPPVRWPFFVALPFL 120

Query: 121 LYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 180
           LYAW+AV FELGNWRK V+ +  FV  +LKGALALILYVIGDPITS+IRGIET FYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVNLVGFVVSLLKGALALILYVIGDPITSVIRGIETAFYTIRS 180

Query: 181 FYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISE 240
           F+SS+VAYAPV ELTT+IILASTV+AISEAS PDSV +QPYLLTLSGLA YAAVR YISE
Sbjct: 181 FHSSIVAYAPVSELTTIIILASTVLAISEASAPDSVRSQPYLLTLSGLAGYAAVRGYISE 240

Query: 241 PFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 300
           PFFWTILL VY +S FVKKR+DV+SALPAAAVFAAIGEPWVRILAMGSF+ LAI HHWK 
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVSSALPAAAVFAAIGEPWVRILAMGSFLALAITHHWKN 300

Query: 301 VSQGK---EREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           +SQGK   E E+GVY  D+P+PLLG ALAIGIH AAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEDEKGVYRWDIPLPLLGVALAIGIHGAAKWAGYRHLTWMIV 347

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BLAST of CmoCh15G011380 vs. TrEMBL
Match: M5X5M3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008067mg PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 5.9e-105
Identity = 212/346 (61.27%), Postives = 257/346 (74.28%), Query Frame = 1 

Query: 4   ALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSHNLS 63
           AL A   STL+L +    S SPL+ RP+ Q +QF SS  K+  +      N    S    
Sbjct: 7   ALSAPSPSTLRLKIT---SFSPLSIRPRKQTIQFRSST-KVQILNPIQAHNFPGFSGKAI 66

Query: 64  GFLISRSLGPFTVSA---GAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 123
           GFL  R L    VSA   G  E + +   E TMPERFRYLTKEAPDPPVRWP+FVAL F+
Sbjct: 67  GFLFERRLR-VRVSAKSDGVDEAEEETGGESTMPERFRYLTKEAPDPPVRWPWFVALVFL 126

Query: 124 LYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 183
           +YAW+AV  EL NWRKA L +  FVGY+LK  LALI + +GDPIT +IR IETT YT+RS
Sbjct: 127 IYAWRAVLLELANWRKAALAVVRFVGYLLKLILALIFHFLGDPITFIIRFIETTIYTLRS 186

Query: 184 FYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISE 243
           FYS +VAYAP+PELTT+I+LASTV+AI+EA VP+S++ QP+LLT SG+  YAAV  YISE
Sbjct: 187 FYSGIVAYAPIPELTTVIMLASTVLAIAEAVVPNSINCQPFLLTASGVVGYAAVTGYISE 246

Query: 244 PFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 303
           PFFWTIL+G+Y +S+FVKKRDDVTSALPAAAV AA+GEP++R+L + S++ LAI HH KK
Sbjct: 247 PFFWTILMGLYGYSRFVKKRDDVTSALPAAAVLAAVGEPYIRVLVISSYLALAILHHSKK 306

Query: 304 VSQGKEREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           +S+ KE E  V  R +P+PLLG ALAIGIH AAKWAGYRHLTWMIV
Sbjct: 307 LSERKE-EIVVTNRKLPMPLLGVALAIGIHLAAKWAGYRHLTWMIV 346

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BLAST of CmoCh15G011380 vs. TrEMBL
Match: A0A0D2VAK8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G073800 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 8.8e-101
Identity = 187/269 (69.52%), Postives = 222/269 (82.53%), Query Frame = 1 

Query: 79  GAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWKAVFFELGNWRKAV 138
           G  E +   R E TMPERFRYLTKEAPDPPVRWPFFVA+AF+LYAW+AV  EL NWR A 
Sbjct: 84  GVDEAERLARGESTMPERFRYLTKEAPDPPVRWPFFVAVAFLLYAWRAVLLELSNWRNAA 143

Query: 139 LCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRSFYSSVVAYAPVPELTTLI 198
             +  FVGYILK ALALI Y IGDPITSMIR IET  Y++R+FYS +VAYAPV ELT +I
Sbjct: 144 FSVVRFVGYILKLALALIFYFIGDPITSMIRCIETLIYSVRAFYSGIVAYAPVKELTVII 203

Query: 199 ILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISEPFFWTILLGVYSFSKFVK 258
           +LAS V+AI+EA+VP+S+S QPY+LT+SGL  YAAV  YISEP +WT+LLG+YSFS+ +K
Sbjct: 204 VLASAVLAIAEATVPNSISCQPYMLTMSGLIGYAAVTGYISEPLYWTLLLGLYSFSRVIK 263

Query: 259 KRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKKVSQGKEREEGV-YERDVP 318
           KRDDVTSALP AAV AAIGEPWVRIL + S++ LAI++H KK+S+G+E  EG+  ER +P
Sbjct: 264 KRDDVTSALPVAAVMAAIGEPWVRILVITSYLALAIFNHSKKLSEGREETEGIAMERRLP 323

Query: 319 VPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           +PLLGAALAIGI+ AAKW GYRHLTWMIV
Sbjct: 324 MPLLGAALAIGINLAAKWVGYRHLTWMIV 352

[Close]
BLAST of CmoCh15G011380 vs. TrEMBL
Match: W9R094_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022189 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.3e-100
Identity = 194/333 (58.26%), Postives = 247/333 (74.17%), Query Frame = 1 

Query: 24  SPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSHNLSGFLISRSLGPFTVSAGAV-- 83
           SP+  R +S+ V F SSP K+ +       N +  S      L  R    F V   A   
Sbjct: 24  SPITTRFRSRFVTFSSSPTKLQSFNPLSADNLDGFSGKRPELLFGRK---FWVCLAAKND 83

Query: 84  --------EPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWKAVFFELGN 143
                   E + + R E T+PERFRYLT+EAPD P+RWP+FVA+AF++YAW+ V FEL N
Sbjct: 84  DKGDEIDEEGEKEARGESTLPERFRYLTEEAPDLPLRWPWFVAVAFLIYAWRTVLFELYN 143

Query: 144 WRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRSFYSSVVAYAPVPE 203
           W+KA + I  F GY+LK  LAL+++ IGDPITS+IR +ET  YT+R++YS +VAYAPVPE
Sbjct: 144 WKKAAIAIVRFAGYLLKLLLALMIHFIGDPITSLIRCVETALYTVRAYYSGIVAYAPVPE 203

Query: 204 LTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISEPFFWTILLGVYSF 263
           LTT+IIL+S V+AI+EA+VPDSVS+QP++LT+SGL  YAAVR YISEPFFWT+L+G+Y+F
Sbjct: 204 LTTIIILSSAVLAIAEATVPDSVSSQPHILTISGLIGYAAVRGYISEPFFWTLLVGLYTF 263

Query: 264 SKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKKVSQGKEREEGVYE 323
           S+ VKKRDDV++ALP AAV AAIGEPWVR+LAM S++ LAI HH KK+ +GKE+E  V  
Sbjct: 264 SRLVKKRDDVSAALPVAAVLAAIGEPWVRVLAMASYLALAISHHSKKLREGKEKEV-VAA 323

Query: 324 RDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           R +P+PLLG ALAIGI  AAKWAGYRHLTWM+V
Sbjct: 324 RKLPLPLLGVALAIGIRIAAKWAGYRHLTWMVV 352

[Close]
BLAST of CmoCh15G011380 vs. TrEMBL
Match: A0A0B0P998_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_25029 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.3e-100
Identity = 193/304 (63.49%), Postives = 234/304 (76.97%), Query Frame = 1 

Query: 50  KPTRNCNVLSHNLSGFLISR------SLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKE 109
           +P  N  +LS    G  ++R      + G      G  E +   R E TMPERFRYLTKE
Sbjct: 49  RPAPNFLLLSGKRLGLSLNRKSKFYANAGNGGEDGGVDEAERLARGESTMPERFRYLTKE 108

Query: 110 APDPPVRWPFFVALAFILYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDP 169
           APDPPVRWPFFVA+AF+LYAW+AV  EL NWR A   +  FVGYILK ALALI Y IGDP
Sbjct: 109 APDPPVRWPFFVAVAFLLYAWRAVLLELSNWRNAAFGVVRFVGYILKLALALIFYFIGDP 168

Query: 170 ITSMIRGIETTFYTIRSFYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLL 229
           ITSMIR IET  Y++R+FYS +VAYAPV ELT +I+LAS V+AI+EA+VP+S+S QPY+L
Sbjct: 169 ITSMIRCIETLIYSVRAFYSGIVAYAPVKELTVIIVLASAVLAIAEATVPNSISCQPYML 228

Query: 230 TLSGLASYAAVRAYISEPFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRI 289
           T+SGL  YAAV  YISEP +WT+LLG+YSFS+ +KKRDDVTSALP AAV AAIGEPWVRI
Sbjct: 229 TISGLIGYAAVTGYISEPLYWTLLLGLYSFSRVIKKRDDVTSALPVAAVMAAIGEPWVRI 288

Query: 290 LAMGSFMGLAIWHHWKKVSQGKEREEGV-YERDVPVPLLGAALAIGIHAAAKWAGYRHLT 347
           L + S++ LAI++H KK+S+ +E+ EG+  ER +P+PLLGAALAIGI+ AAKW GYRHLT
Sbjct: 289 LVITSYLALAIFNHSKKLSEVREQTEGIAMERRLPMPLLGAALAIGINLAAKWVGYRHLT 348

[Close]
BLAST of CmoCh15G011380 vs. TAIR10
Match: AT4G28210.1 (AT4G28210.1 embryo defective 1923)

HSP 1 Score: 334.7 bits (857), Expect = 6.6e-92
Identity = 161/259 (62.16%), Postives = 206/259 (79.54%), Query Frame = 1 

Query: 88  REEGTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWKAVFFELGNWRKAVLCIFNFVGY 147
           R E TMP+RFRYLTKEAPD P+ WP+FVAL F++YAW+AV FEL NWRKA   I  FVG 
Sbjct: 92  RRESTMPDRFRYLTKEAPDSPIIWPWFVALGFLVYAWRAVLFELSNWRKAAFAILAFVGD 151

Query: 148 ILKGALALILYVIGDPITSMIRGIETTFYTIRSFYSSVVAYAPVPELTTLIILASTVVAI 207
           + K ALAL+ + IGDPITS+I  +ET  Y++R+FYS +VAY PV ELTT+I+LAS+V+AI
Sbjct: 152 LSKFALALVFHFIGDPITSLISLVETAMYSVRAFYSGIVAYTPVRELTTVILLASSVLAI 211

Query: 208 SEASVPDSVSTQPYLLTLSGLASYAAVRAYISEPFFWTILLGVYSFSKFVKKRDDVTSAL 267
            EA  P+S+S QPY++T++GL  YAAV++YISEPFFWT+LLG+Y +S+ +KKRDDVTSAL
Sbjct: 212 GEAVAPESISKQPYVVTIAGLVGYAAVQSYISEPFFWTVLLGLYGYSRLIKKRDDVTSAL 271

Query: 268 PAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKKVSQGKEREEGVYERDVPVPLLGAALAI 327
           P+AAV A +GEPWVR++A+  ++ LA++H+  K S   E E  +  R  P+PLL AALAI
Sbjct: 272 PSAAVLAGVGEPWVRVVAITGYLALAMYHNSTKTS--SEEESQILRRAPPMPLLAAALAI 331

Query: 328 GIHAAAKWAGYRHLTWMIV 347
           G+  AAKWAGYRHLTWMIV
Sbjct: 332 GVRLAAKWAGYRHLTWMIV 348

[Close]
BLAST of CmoCh15G011380 vs. NCBI nr
Match: gi|659074285|ref|XP_008437523.1| (PREDICTED: uncharacterized protein LOC103482911 [Cucumis melo])

HSP 1 Score: 537.0 bits (1382), Expect = 2.5e-149
Identity = 275/349 (78.80%), Postives = 302/349 (86.53%), Query Frame = 1 

Query: 1   MATALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSH 60
           MAT+LIA LSS LKLP+L+AISSSP  FR ++Q V F +SP KI T+W  PTRNCNVLSH
Sbjct: 1   MATSLIAALSSNLKLPILSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60

Query: 61  NLSGFLISRSLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
           N SGFLISR L  FTV A   E Q+DDREE T+PERFRYLTKEAPDPPVRWPFFVAL F+
Sbjct: 61  NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120

Query: 121 LYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 180
           LYAW+AV FELGNWRK V+ +F+FV  ILKGALALILYVIGDPITSMIRGIET FYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180

Query: 181 FYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISE 240
           FYSS+VAYAP+PELTT+I+LAS ++AISEAS PDSVS+QPYLLTLSGLA Y AVR YISE
Sbjct: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240

Query: 241 PFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 300
           PFFWTILL VY +S FVKKR+DVTSALPAA VFAAIGEPWVRILAMGSF+ LAI HHWKK
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300

Query: 301 VSQGK---EREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           +SQGK   E E+GVY  DVP+PLLG ALAIGIHAAAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349

[Close]
BLAST of CmoCh15G011380 vs. NCBI nr
Match: gi|449456317|ref|XP_004145896.1| (PREDICTED: uncharacterized protein LOC101214502 [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 3.0e-142
Identity = 268/349 (76.79%), Postives = 294/349 (84.24%), Query Frame = 1 

Query: 1   MATALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSH 60
           MAT LIA LSS LKLPLL+AISSSP  FR ++Q V F +SP  I T+W  PTRNCNV+SH
Sbjct: 1   MATTLIASLSSNLKLPLLSAISSSPSTFRRQTQTVPFSNSP--IQTLWLNPTRNCNVISH 60

Query: 61  NLSGFLISRSLGPFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
           N SGFLISR L  FTV A   E Q+DDREE TMPERFRYL KE  DPPVRWPFFVAL F+
Sbjct: 61  NRSGFLISRKLESFTVFAADFEAQSDDREESTMPERFRYLAKEGSDPPVRWPFFVALPFL 120

Query: 121 LYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 180
           LYAW+AV FELGNWRK V+ +  FV  +LKGALALILYVIGDPITS+IRGIET FYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVNLVGFVVSLLKGALALILYVIGDPITSVIRGIETAFYTIRS 180

Query: 181 FYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISE 240
           F+SS+VAYAPV ELTT+IILASTV+AISEAS PDSV +QPYLLTLSGLA YAAVR YISE
Sbjct: 181 FHSSIVAYAPVSELTTIIILASTVLAISEASAPDSVRSQPYLLTLSGLAGYAAVRGYISE 240

Query: 241 PFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 300
           PFFWTILL VY +S FVKKR+DV+SALPAAAVFAAIGEPWVRILAMGSF+ LAI HHWK 
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVSSALPAAAVFAAIGEPWVRILAMGSFLALAITHHWKN 300

Query: 301 VSQGK---EREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           +SQGK   E E+GVY  D+P+PLLG ALAIGIH AAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKEDEDEKGVYRWDIPLPLLGVALAIGIHGAAKWAGYRHLTWMIV 347

[Close]
BLAST of CmoCh15G011380 vs. NCBI nr
Match: gi|595938078|ref|XP_007215629.1| (hypothetical protein PRUPE_ppa008067mg [Prunus persica])

HSP 1 Score: 389.0 bits (998), Expect = 8.4e-105
Identity = 212/346 (61.27%), Postives = 257/346 (74.28%), Query Frame = 1 

Query: 4   ALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSHNLS 63
           AL A   STL+L +    S SPL+ RP+ Q +QF SS  K+  +      N    S    
Sbjct: 7   ALSAPSPSTLRLKIT---SFSPLSIRPRKQTIQFRSST-KVQILNPIQAHNFPGFSGKAI 66

Query: 64  GFLISRSLGPFTVSA---GAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFI 123
           GFL  R L    VSA   G  E + +   E TMPERFRYLTKEAPDPPVRWP+FVAL F+
Sbjct: 67  GFLFERRLR-VRVSAKSDGVDEAEEETGGESTMPERFRYLTKEAPDPPVRWPWFVALVFL 126

Query: 124 LYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRS 183
           +YAW+AV  EL NWRKA L +  FVGY+LK  LALI + +GDPIT +IR IETT YT+RS
Sbjct: 127 IYAWRAVLLELANWRKAALAVVRFVGYLLKLILALIFHFLGDPITFIIRFIETTIYTLRS 186

Query: 184 FYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISE 243
           FYS +VAYAP+PELTT+I+LASTV+AI+EA VP+S++ QP+LLT SG+  YAAV  YISE
Sbjct: 187 FYSGIVAYAPIPELTTVIMLASTVLAIAEAVVPNSINCQPFLLTASGVVGYAAVTGYISE 246

Query: 244 PFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKK 303
           PFFWTIL+G+Y +S+FVKKRDDVTSALPAAAV AA+GEP++R+L + S++ LAI HH KK
Sbjct: 247 PFFWTILMGLYGYSRFVKKRDDVTSALPAAAVLAAVGEPYIRVLVISSYLALAILHHSKK 306

Query: 304 VSQGKEREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           +S+ KE E  V  R +P+PLLG ALAIGIH AAKWAGYRHLTWMIV
Sbjct: 307 LSERKE-EIVVTNRKLPMPLLGVALAIGIHLAAKWAGYRHLTWMIV 346

[Close]
BLAST of CmoCh15G011380 vs. NCBI nr
Match: gi|694332981|ref|XP_009357101.1| (PREDICTED: uncharacterized protein LOC103947859 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 375.9 bits (964), Expect = 7.4e-101
Identity = 204/348 (58.62%), Postives = 251/348 (72.13%), Query Frame = 1 

Query: 1   MATALIAGLSSTLKLPLLTAISSSPLNFRPKSQNVQFCSSPCKIHTIWNKPTRNCNVLSH 60
           M+T++    + T  +  L   S SP   RP  Q + F +S  K   +     +     S 
Sbjct: 1   MSTSIPTISAPTPSILRLKVASFSPPRIRPHIQTISFRNS-LKFQCLNPIQAQKFPGFSG 60

Query: 61  NLSGFLISRSLG--PFTVSAGAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALA 120
           N +GFL  R L       + G    +++ + E TMPERFRYLTKEAPDPPVRWP+FVAL 
Sbjct: 61  NTNGFLFDRKLRVCASAKNEGVDAAEDESKGESTMPERFRYLTKEAPDPPVRWPWFVALV 120

Query: 121 FILYAWKAVFFELGNWRKAVLCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTI 180
           F++YAW+AV  EL NW+KA + +  FVGY+LK  LALI + IGDPITS+IR IETT Y I
Sbjct: 121 FLIYAWRAVLLELANWKKAAVGVVRFVGYLLKLILALIFHFIGDPITSVIRFIETTLYAI 180

Query: 181 RSFYSSVVAYAPVPELTTLIILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYI 240
           RSFYS +VAYAP+PELTT+IILAS V+AI+EA VP++V+ QP+LLT SG+  YAAV  YI
Sbjct: 181 RSFYSGIVAYAPIPELTTVIILASIVLAIAEAVVPNAVNCQPFLLTASGVVGYAAVAGYI 240

Query: 241 SEPFFWTILLGVYSFSKFVKKRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHW 300
           SEPFFWTIL+G Y +S+ VKKRDDVTSALPAAAV AAIGEPWVR+L + S++ LAI+HH 
Sbjct: 241 SEPFFWTILVGFYGYSRLVKKRDDVTSALPAAAVMAAIGEPWVRVLVIASYLALAIFHHS 300

Query: 301 KKVSQGKEREEGVYERDVPVPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           KKVS+ KE E  V +R +P+PLLGA LAIGI  AAKWAGYRHLTWMIV
Sbjct: 301 KKVSEKKE-EIVVTDRKLPMPLLGAGLAIGIRLAAKWAGYRHLTWMIV 346

[Close]
BLAST of CmoCh15G011380 vs. NCBI nr
Match: gi|823261914|ref|XP_012463694.1| (PREDICTED: uncharacterized protein LOC105783058 [Gossypium raimondii])

HSP 1 Score: 375.2 bits (962), Expect = 1.3e-100
Identity = 187/269 (69.52%), Postives = 222/269 (82.53%), Query Frame = 1 

Query: 79  GAVEPQNDDREEGTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWKAVFFELGNWRKAV 138
           G  E +   R E TMPERFRYLTKEAPDPPVRWPFFVA+AF+LYAW+AV  EL NWR A 
Sbjct: 84  GVDEAERLARGESTMPERFRYLTKEAPDPPVRWPFFVAVAFLLYAWRAVLLELSNWRNAA 143

Query: 139 LCIFNFVGYILKGALALILYVIGDPITSMIRGIETTFYTIRSFYSSVVAYAPVPELTTLI 198
             +  FVGYILK ALALI Y IGDPITSMIR IET  Y++R+FYS +VAYAPV ELT +I
Sbjct: 144 FSVVRFVGYILKLALALIFYFIGDPITSMIRCIETLIYSVRAFYSGIVAYAPVKELTVII 203

Query: 199 ILASTVVAISEASVPDSVSTQPYLLTLSGLASYAAVRAYISEPFFWTILLGVYSFSKFVK 258
           +LAS V+AI+EA+VP+S+S QPY+LT+SGL  YAAV  YISEP +WT+LLG+YSFS+ +K
Sbjct: 204 VLASAVLAIAEATVPNSISCQPYMLTMSGLIGYAAVTGYISEPLYWTLLLGLYSFSRVIK 263

Query: 259 KRDDVTSALPAAAVFAAIGEPWVRILAMGSFMGLAIWHHWKKVSQGKEREEGV-YERDVP 318
           KRDDVTSALP AAV AAIGEPWVRIL + S++ LAI++H KK+S+G+E  EG+  ER +P
Sbjct: 264 KRDDVTSALPVAAVMAAIGEPWVRILVITSYLALAIFNHSKKLSEGREETEGIAMERRLP 323

Query: 319 VPLLGAALAIGIHAAAKWAGYRHLTWMIV 347
           +PLLGAALAIGI+ AAKW GYRHLTWMIV
Sbjct: 324 MPLLGAALAIGINLAAKWVGYRHLTWMIV 352

The following BLAST results are available for this feature:
BLAST of CmoCh15G011380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh15G011380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM42_CUCSA2.1e-14276.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141030 PE=4 SV=1[more]
M5X5M3_PRUPE5.9e-10561.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008067mg PE=4 SV=1[more]
A0A0D2VAK8_GOSRA8.8e-10169.52Uncharacterized protein OS=Gossypium raimondii GN=B456_013G073800 PE=4 SV=1[more]
W9R094_9ROSA3.3e-10058.26Uncharacterized protein OS=Morus notabilis GN=L484_022189 PE=4 SV=1[more]
A0A0B0P998_GOSAR3.3e-10063.49Uncharacterized protein OS=Gossypium arboreum GN=F383_25029 PE=4 SV=1[more]
BLAST of CmoCh15G011380 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28210.16.6e-9262.16 embryo defective 1923[more]
BLAST of CmoCh15G011380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074285|ref|XP_008437523.1|2.5e-14978.80PREDICTED: uncharacterized protein LOC103482911 [Cucumis melo][more]
gi|449456317|ref|XP_004145896.1|3.0e-14276.79PREDICTED: uncharacterized protein LOC101214502 [Cucumis sativus][more]
gi|595938078|ref|XP_007215629.1|8.4e-10561.27hypothetical protein PRUPE_ppa008067mg [Prunus persica][more]
gi|694332981|ref|XP_009357101.1|7.4e-10158.62PREDICTED: uncharacterized protein LOC103947859 isoform X2 [Pyrus x bretschneide... [more]
gi|823261914|ref|XP_012463694.1|1.3e-10069.52PREDICTED: uncharacterized protein LOC105783058 [Gossypium raimondii][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071840 cellular component organization or biogenesis
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0009409 response to cold
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G011380.1CmoCh15G011380.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G011380Cucsa.193030Cucumber (Gy14) v1cgycmoB0561
CmoCh15G011380CmaCh15G010790Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G011380Cla004947Watermelon (97103) v1cmowmB262
CmoCh15G011380Csa5G141030Cucumber (Chinese Long) v2cmocuB279
CmoCh15G011380MELO3C005833Melon (DHL92) v3.5.1cmomeB246
CmoCh15G011380ClCG01G000980Watermelon (Charleston Gray)cmowcgB243
CmoCh15G011380CSPI05G03770Wild cucumber (PI 183967)cmocpiB288
CmoCh15G011380Lsi09G000850Bottle gourd (USVL1VR-Ls)cmolsiB249
CmoCh15G011380Cp4.1LG13g02730Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G011380MELO3C005833.2Melon (DHL92) v3.6.1cmomedB278
CmoCh15G011380CsaV3_5G001130Cucumber (Chinese Long) v3cmocucB0338
CmoCh15G011380Cla97C01G001050Watermelon (97103) v2cmowmbB266
CmoCh15G011380Bhi12G000686Wax gourdcmowgoB0361
CmoCh15G011380CsGy5G000980Cucumber (Gy14) v2cgybcmoB575
CmoCh15G011380Carg23170Silver-seed gourdcarcmoB0735
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G011380Melon (DHL92) v3.6.1cmomedB308
CmoCh15G011380Silver-seed gourdcarcmoB0964
CmoCh15G011380Silver-seed gourdcarcmoB1325
CmoCh15G011380Cucurbita moschata (Rifu)cmocmoB236
CmoCh15G011380Cucurbita moschata (Rifu)cmocmoB243
CmoCh15G011380Cucurbita moschata (Rifu)cmocmoB251
CmoCh15G011380Cucurbita maxima (Rimu)cmacmoB403
CmoCh15G011380Cucurbita maxima (Rimu)cmacmoB584
CmoCh15G011380Watermelon (Charleston Gray)cmowcgB256
CmoCh15G011380Watermelon (97103) v1cmowmB260
CmoCh15G011380Cucurbita pepo (Zucchini)cmocpeB270
CmoCh15G011380Cucurbita pepo (Zucchini)cmocpeB264
CmoCh15G011380Cucurbita pepo (Zucchini)cmocpeB293
CmoCh15G011380Cucumber (Gy14) v2cgybcmoB463