Cla004947 (gene) Watermelon (97103) v1

Overview
NameCla004947
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 739964 .. 742298 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTACACTTATCTCTGGCCTTTCTTCAAACCTAAAGCTTCCTTTTCTCTCTGCAATTTCATCTTCCCACTTCCGACCCGGAACCCAGAACGCTCCATTTTCTAACTCCCCCTTCAAAGTTCAGACCCTCTGGCTCAATCCCACAAGAAATTCCAATGTGTTATCCCATAATCGAACTGGGTTTCTGATTTCGAGGAAATTGGAATCTTTCACCGTCTTTGCTGGAGATTCTGAAGCTCAAAGTGATGGTAGAGGGGAGAGTACTATGCCTGAACGGTTCAGGTACTTGACTAAAGAAGCTCCTGATCCTCCTGTGAGATGGCCTTTCTTTGTGGGTAAATTCTTCTACTCTTTACACTTTTTTCTTTTTCTTGTTTTAGATGTTTAAGAATCTCTTCTGTTTTTGGTTTATTGAATTTTAACACTTCGTATCATTCTAATCTTCAAAACTTGTTGGTGAGCTTGGGATCGTTGAATTCAGGTTAGAAAATATTGCCAAAGTTGATTATAGGTTAATGCAGGACAAATACTTTTACAATGATGCCTAATTCATTTAGGATCCTAAATTTGTAGATAAAAAACCTTTTGGAATTTTTGTCATTGTAACAAGAACCCTTGTATCTGCAATAGTTTCTAAGCTCTACAGTTTTTAATTCATTGCTTAGATTATGGTACTCCTTAGTCCTCCACCACGAAAAATAAGGCAAACTATTGTGGCTCGCTACGTTCTTTGTAGTTTTATAGGGTATTTGGATCGAGTGTAATAATAGGATCTTCAGACAGGTTGAGAGGCTTAATACCTCTCCGTGGCCGTCAATCATAGAGGCCTTTTGTTATTATAATCTTGGTTTGATTTTGTTTGATTGGAATCTTTTCTTTAGTTAGGGGTGTTTGGGCTGCTGAATTGGGTTATGAAATATGGAATTAGGAAGTCTTTGTTTTGGGTGTAAAATTGTGAAGATGGAGTTTATGATAAATGTGCAAAAGAGAGAAAGAGGACTCGATAAATGTACAAACTTCAGTAGTGAACACTATTGAAGTTGGTGGAGTTTAGTTATTTAACACTAAGTCAATGGGCCAAACACCCCTTTAGTTCTTGCACTCTCATTTCTTGTTGGTTTTTTATCCATTCATATGACCTCATTCAGAAAGAAAGCTCGGTTTCTTACCAAGGAAAAAAGTTAAAAAAAATTGGTATGGACAATGGACATGTGAGTATGTGTTTGAAACTTGGACACTGACCCTATGTCATAAGGAATTAGCTTAAACCATTCCGTAAGTTTATGAGTTTTGTTTCCTTCAATCATTTTAATACTGAATCAGGATTCTTAATACATTTGAATCTTGTTCATTATAATCCCTTTCTGAAGAGAACAATTGATATGCTTATGGATTAAGCTTAATCTTGTTCACTGTGGCCGTTGAACCTTCTACAGATAACACCTCCCCACCATATGAGCAGCTTTAGCAGCTTCTTTTTCCGACTCATCCTTTGTTGTTGATCAGAATTATTCGACCTTAGTTATATAAAAATTCGAGTTCGTTAGCTTTCAATATCATTATTGGAAGATGAATTAATTGCTTTTAAAATAACAACTTTTACCTTTGGTTATATTGCAGCTCTGGCATTTATTCTCTATGCCTGGAGAGCAGTCTTGTTTGAACTTGCTAACTGGAGAAAGGCTGTCCTTAGCATCTTTGGTTTTGTGGGATACATATTGAAAGGTGCTTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACTGCATTCTACACGATTCGATCTTTCTACTCGGGCATAGTTGCATATGCGCCCATTCCCGAACTGACCACGATAATCATACTAGCCTCAACCGTGCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCCGTTAGTAGTCAACCGTATCTTCTAACGATATCAGGTCTTGCTGGCTATGCAGCGGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACGATTCTGTTGTGTGTGTATGGTTTTTCCAGGTTCGTCAAAAAGAGAAATGATGTAACTTCAACATTGCCTGTTGCTGCTGTGTTTGCTGCCATTGGAGAGCCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTTATCACCATTGGAAGAAGGTTTCACAAGGACAGAAAGAAGATGAAGTTGAAGATGAAAAAGCTGTGTATCAGAGGGATGTTCCACTGCCTCTTCTGGGTGTAGCTTTGGCTATTGGAATTCGTGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTGTATGA

mRNA sequence

ATGGCGACTACACTTATCTCTGGCCTTTCTTCAAACCTAAAGCTTCCTTTTCTCTCTGCAATTTCATCTTCCCACTTCCGACCCGGAACCCAGAACGCTCCATTTTCTAACTCCCCCTTCAAAGTTCAGACCCTCTGGCTCAATCCCACAAGAAATTCCAATGTGTTATCCCATAATCGAACTGGGTTTCTGATTTCGAGGAAATTGGAATCTTTCACCGTCTTTGCTGGAGATTCTGAAGCTCAAAGTGATGGTAGAGGGGAGAGTACTATGCCTGAACGGTTCAGGTACTTGACTAAAGAAGCTCCTGATCCTCCTGTGAGATGGCCTTTCTTTGTGGCTCTGGCATTTATTCTCTATGCCTGGAGAGCAGTCTTGTTTGAACTTGCTAACTGGAGAAAGGCTGTCCTTAGCATCTTTGGTTTTGTGGGATACATATTGAAAGGTGCTTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACTGCATTCTACACGATTCGATCTTTCTACTCGGGCATAGTTGCATATGCGCCCATTCCCGAACTGACCACGATAATCATACTAGCCTCAACCGTGCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCCGTTAGTAGTCAACCGTATCTTCTAACGATATCAGGTCTTGCTGGCTATGCAGCGGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACGATTCTGTTGTGTGTGTATGGTTTTTCCAGGTTCGTCAAAAAGAGAAATGATGTAACTTCAACATTGCCTGTTGCTGCTGTGTTTGCTGCCATTGGAGAGCCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTTATCACCATTGGAAGAAGGTTTCACAAGGACAGAAAGAAGATGAAGTTGAAGATGAAAAAGCTGTGTATCAGAGGGATGTTCCACTGCCTCTTCTGGGTGTAGCTTTGGCTATTGGAATTCGTGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTGTATGA

Coding sequence (CDS)

ATGGCGACTACACTTATCTCTGGCCTTTCTTCAAACCTAAAGCTTCCTTTTCTCTCTGCAATTTCATCTTCCCACTTCCGACCCGGAACCCAGAACGCTCCATTTTCTAACTCCCCCTTCAAAGTTCAGACCCTCTGGCTCAATCCCACAAGAAATTCCAATGTGTTATCCCATAATCGAACTGGGTTTCTGATTTCGAGGAAATTGGAATCTTTCACCGTCTTTGCTGGAGATTCTGAAGCTCAAAGTGATGGTAGAGGGGAGAGTACTATGCCTGAACGGTTCAGGTACTTGACTAAAGAAGCTCCTGATCCTCCTGTGAGATGGCCTTTCTTTGTGGCTCTGGCATTTATTCTCTATGCCTGGAGAGCAGTCTTGTTTGAACTTGCTAACTGGAGAAAGGCTGTCCTTAGCATCTTTGGTTTTGTGGGATACATATTGAAAGGTGCTTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACTGCATTCTACACGATTCGATCTTTCTACTCGGGCATAGTTGCATATGCGCCCATTCCCGAACTGACCACGATAATCATACTAGCCTCAACCGTGCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCCGTTAGTAGTCAACCGTATCTTCTAACGATATCAGGTCTTGCTGGCTATGCAGCGGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACGATTCTGTTGTGTGTGTATGGTTTTTCCAGGTTCGTCAAAAAGAGAAATGATGTAACTTCAACATTGCCTGTTGCTGCTGTGTTTGCTGCCATTGGAGAGCCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTTATCACCATTGGAAGAAGGTTTCACAAGGACAGAAAGAAGATGAAGTTGAAGATGAAAAAGCTGTGTATCAGAGGGATGTTCCACTGCCTCTTCTGGGTGTAGCTTTGGCTATTGGAATTCGTGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTGTATGA

Protein sequence

MATTLISGLSSNLKLPFLSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNVLSHNRTGFLISRKLESFTVFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV
Homology
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BLAST of Cla004947 vs. TrEMBL
Match: A0A0A0KM42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141030 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 8.4e-160
Identity = 293/351 (83.48%), Postives = 312/351 (88.89%), Query Frame = 1 

Query: 1   MATTLISGLSSNLKLPFLSAISS--SHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNVLSH 60
           MATTLI+ LSSNLKLP LSAISS  S FR  TQ  PFSNSP  +QTLWLNPTRN NV+SH
Sbjct: 1   MATTLIASLSSNLKLPLLSAISSSPSTFRRQTQTVPFSNSP--IQTLWLNPTRNCNVISH 60

Query: 61  NRTGFLISRKLESFTVFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
           NR+GFLISRKLESFTVFA D EAQSD R ESTMPERFRYL KE  DPPVRWPFFVAL F+
Sbjct: 61  NRSGFLISRKLESFTVFAADFEAQSDDREESTMPERFRYLAKEGSDPPVRWPFFVALPFL 120

Query: 121 LYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
           LYAWRAVLFEL NWRK V+++ GFV  +LKGALALILYVIGDPITS+IRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVNLVGFVVSLLKGALALILYVIGDPITSVIRGIETAFYTIRS 180

Query: 181 FYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISE 240
           F+S IVAYAP+ ELTTIIILASTVLAISEASAPDSV SQPYLLT+SGLAGYAAVRGYISE
Sbjct: 181 FHSSIVAYAPVSELTTIIILASTVLAISEASAPDSVRSQPYLLTLSGLAGYAAVRGYISE 240

Query: 241 PFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKK 300
           PFFWTILLCVYG+S FVKKRNDV+S LP AAVFAAIGEPWVRILAMGSFLALAI HHWK 
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVSSALPAAAVFAAIGEPWVRILAMGSFLALAITHHWKN 300

Query: 301 VSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
           +SQG+KED  EDEK VY+ D+PLPLLGVALAIGI  AAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKED--EDEKGVYRWDIPLPLLGVALAIGIHGAAKWAGYRHLTWMIV 347

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BLAST of Cla004947 vs. TrEMBL
Match: W9R094_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022189 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.6e-108
Identity = 215/347 (61.96%), Postives = 262/347 (75.50%), Query Frame = 1 

Query: 12  NLKLPFLSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNV--LSHNRTGFLISRKL 71
           NLK    S I++  FR  ++   FS+SP K+Q+   NP    N+   S  R   L  RK 
Sbjct: 17  NLKFTCRSPITT-RFR--SRFVTFSSSPTKLQSF--NPLSADNLDGFSGKRPELLFGRKF 76

Query: 72  ESFTVFAGDS-------EAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAW 131
                   D        E + + RGEST+PERFRYLT+EAPD P+RWP+FVA+AF++YAW
Sbjct: 77  WVCLAAKNDDKGDEIDEEGEKEARGESTLPERFRYLTEEAPDLPLRWPWFVAVAFLIYAW 136

Query: 132 RAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSG 191
           R VLFEL NW+KA ++I  F GY+LK  LAL+++ IGDPITS+IR +ETA YT+R++YSG
Sbjct: 137 RTVLFELYNWKKAAIAIVRFAGYLLKLLLALMIHFIGDPITSLIRCVETALYTVRAYYSG 196

Query: 192 IVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFW 251
           IVAYAP+PELTTIIIL+S VLAI+EA+ PDSVSSQP++LTISGL GYAAVRGYISEPFFW
Sbjct: 197 IVAYAPVPELTTIIILSSAVLAIAEATVPDSVSSQPHILTISGLIGYAAVRGYISEPFFW 256

Query: 252 TILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQG 311
           T+L+ +Y FSR VKKR+DV++ LPVAAV AAIGEPWVR+LAM S+LALAI HH KK+ +G
Sbjct: 257 TLLVGLYTFSRLVKKRDDVSAALPVAAVLAAIGEPWVRVLAMASYLALAISHHSKKLREG 316

Query: 312 QKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
            KE EV     V  R +PLPLLGVALAIGIR AAKWAGYRHLTWM+V
Sbjct: 317 -KEKEV-----VAARKLPLPLLGVALAIGIRIAAKWAGYRHLTWMVV 352

[Close]
BLAST of Cla004947 vs. TrEMBL
Match: A0A0D2VAK8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G073800 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.4e-108
Identity = 213/352 (60.51%), Postives = 254/352 (72.16%), Query Frame = 1 

Query: 4   TLISGLSSNLKLPFLSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNVLSHNRTGF 63
           T+ S  S N  L  L   S S     +++    + P   Q     P  N   LS  R G 
Sbjct: 5   TIASNFSLNPSLFPLKTSSISRRTVLSRHQTPPSFPSIPQAFIPRPAPNFLSLSGKRLGL 64

Query: 64  LISRKLESFT------VFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAF 123
            ++RK + +        F G  EA+   RGESTMPERFRYLTKEAPDPPVRWPFFVA+AF
Sbjct: 65  SLNRKSKFYANAGNGGEFGGVDEAERLARGESTMPERFRYLTKEAPDPPVRWPFFVAVAF 124

Query: 124 ILYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIR 183
           +LYAWRAVL EL+NWR A  S+  FVGYILK ALALI Y IGDPITSMIR IET  Y++R
Sbjct: 125 LLYAWRAVLLELSNWRNAAFSVVRFVGYILKLALALIFYFIGDPITSMIRCIETLIYSVR 184

Query: 184 SFYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYIS 243
           +FYSGIVAYAP+ ELT II+LAS VLAI+EA+ P+S+S QPY+LT+SGL GYAAV GYIS
Sbjct: 185 AFYSGIVAYAPVKELTVIIVLASAVLAIAEATVPNSISCQPYMLTMSGLIGYAAVTGYIS 244

Query: 244 EPFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWK 303
           EP +WT+LL +Y FSR +KKR+DVTS LPVAAV AAIGEPWVRIL + S+LALAI++H K
Sbjct: 245 EPLYWTLLLGLYSFSRVIKKRDDVTSALPVAAVMAAIGEPWVRILVITSYLALAIFNHSK 304

Query: 304 KVSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
           K+S+G++    E E    +R +P+PLLG ALAIGI  AAKW GYRHLTWMIV
Sbjct: 305 KLSEGRE----ETEGIAMERRLPMPLLGAALAIGINLAAKWVGYRHLTWMIV 352

[Close]
BLAST of Cla004947 vs. TrEMBL
Match: M5X5M3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008067mg PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.4e-108
Identity = 214/343 (62.39%), Postives = 256/343 (74.64%), Query Frame = 1 

Query: 11  SNLKLPFLSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNV--LSHNRTGFLISRK 70
           S L+L  +++ S    RP  Q   F +S  KVQ L  NP +  N    S    GFL  R+
Sbjct: 14  STLRLK-ITSFSPLSIRPRKQTIQFRSST-KVQIL--NPIQAHNFPGFSGKAIGFLFERR 73

Query: 71  LESFTVFAGDS--EAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWRAVL 130
           L        D   EA+ +  GESTMPERFRYLTKEAPDPPVRWP+FVAL F++YAWRAVL
Sbjct: 74  LRVRVSAKSDGVDEAEEETGGESTMPERFRYLTKEAPDPPVRWPWFVALVFLIYAWRAVL 133

Query: 131 FELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSGIVAY 190
            ELANWRKA L++  FVGY+LK  LALI + +GDPIT +IR IET  YT+RSFYSGIVAY
Sbjct: 134 LELANWRKAALAVVRFVGYLLKLILALIFHFLGDPITFIIRFIETTIYTLRSFYSGIVAY 193

Query: 191 APIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFWTILL 250
           APIPELTT+I+LASTVLAI+EA  P+S++ QP+LLT SG+ GYAAV GYISEPFFWTIL+
Sbjct: 194 APIPELTTVIMLASTVLAIAEAVVPNSINCQPFLLTASGVVGYAAVTGYISEPFFWTILM 253

Query: 251 CVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQGQKED 310
            +YG+SRFVKKR+DVTS LP AAV AA+GEP++R+L + S+LALAI HH KK+S      
Sbjct: 254 GLYGYSRFVKKRDDVTSALPAAAVLAAVGEPYIRVLVISSYLALAILHHSKKLS------ 313

Query: 311 EVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
           E ++E  V  R +P+PLLGVALAIGI  AAKWAGYRHLTWMIV
Sbjct: 314 ERKEEIVVTNRKLPMPLLGVALAIGIHLAAKWAGYRHLTWMIV 346

[Close]
BLAST of Cla004947 vs. TrEMBL
Match: A0A0B0P998_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_25029 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 9.1e-106
Identity = 202/308 (65.58%), Postives = 238/308 (77.27%), Query Frame = 1 

Query: 49  PTRNSNVLSHNRTGFLISRKLESFTVFAGDS-------EAQSDGRGESTMPERFRYLTKE 108
           P  N  +LS  R G  ++RK   F   AG+        EA+   RGESTMPERFRYLTKE
Sbjct: 50  PAPNFLLLSGKRLGLSLNRK-SKFYANAGNGGEDGGVDEAERLARGESTMPERFRYLTKE 109

Query: 109 APDPPVRWPFFVALAFILYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDP 168
           APDPPVRWPFFVA+AF+LYAWRAVL EL+NWR A   +  FVGYILK ALALI Y IGDP
Sbjct: 110 APDPPVRWPFFVAVAFLLYAWRAVLLELSNWRNAAFGVVRFVGYILKLALALIFYFIGDP 169

Query: 169 ITSMIRGIETAFYTIRSFYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLL 228
           ITSMIR IET  Y++R+FYSGIVAYAP+ ELT II+LAS VLAI+EA+ P+S+S QPY+L
Sbjct: 170 ITSMIRCIETLIYSVRAFYSGIVAYAPVKELTVIIVLASAVLAIAEATVPNSISCQPYML 229

Query: 229 TISGLAGYAAVRGYISEPFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRI 288
           TISGL GYAAV GYISEP +WT+LL +Y FSR +KKR+DVTS LPVAAV AAIGEPWVRI
Sbjct: 230 TISGLIGYAAVTGYISEPLYWTLLLGLYSFSRVIKKRDDVTSALPVAAVMAAIGEPWVRI 289

Query: 289 LAMGSFLALAIYHHWKKVSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGY 348
           L + S+LALAI++H KK+S+ ++    + E    +R +P+PLLG ALAIGI  AAKW GY
Sbjct: 290 LVITSYLALAIFNHSKKLSEVRE----QTEGIAMERRLPMPLLGAALAIGINLAAKWVGY 349

Query: 349 RHLTWMIV 350
           RHLTWMIV
Sbjct: 350 RHLTWMIV 352

[Close]
BLAST of Cla004947 vs. NCBI nr
Match: gi|659074285|ref|XP_008437523.1| (PREDICTED: uncharacterized protein LOC103482911 [Cucumis melo])

HSP 1 Score: 597.8 bits (1540), Expect = 1.2e-167
Identity = 304/351 (86.61%), Postives = 319/351 (90.88%), Query Frame = 1 

Query: 1   MATTLISGLSSNLKLPFLSAISSSH--FRPGTQNAPFSNSPFKVQTLWLNPTRNSNVLSH 60
           MAT+LI+ LSSNLKLP LSAISSS   FR  TQ  PFSNSPFK+QTLWLNPTRN NVLSH
Sbjct: 1   MATSLIAALSSNLKLPILSAISSSPSTFRLQTQTVPFSNSPFKIQTLWLNPTRNCNVLSH 60

Query: 61  NRTGFLISRKLESFTVFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
           NR+GFLISRKLESFTVFA DSEAQSD R EST+PERFRYLTKEAPDPPVRWPFFVAL F+
Sbjct: 61  NRSGFLISRKLESFTVFAADSEAQSDDREESTLPERFRYLTKEAPDPPVRWPFFVALPFL 120

Query: 121 LYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
           LYAWRAVLFEL NWRK V+S+F FV  ILKGALALILYVIGDPITSMIRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVSLFSFVASILKGALALILYVIGDPITSMIRGIETAFYTIRS 180

Query: 181 FYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISE 240
           FYS IVAYAPIPELTTII+LAS +LAISEASAPDSVSSQPYLLT+SGLAGY AVRGYISE
Sbjct: 181 FYSSIVAYAPIPELTTIIVLASAMLAISEASAPDSVSSQPYLLTLSGLAGYLAVRGYISE 240

Query: 241 PFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKK 300
           PFFWTILLCVYG+S FVKKRNDVTS LP A VFAAIGEPWVRILAMGSFLALAI HHWKK
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVTSALPAAVVFAAIGEPWVRILAMGSFLALAITHHWKK 300

Query: 301 VSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
           +SQG+KED  EDEK VY+ DVPLPLLGVALAIGI AAAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKED--EDEKGVYRWDVPLPLLGVALAIGIHAAAKWAGYRHLTWMIV 349

[Close]
BLAST of Cla004947 vs. NCBI nr
Match: gi|449456317|ref|XP_004145896.1| (PREDICTED: uncharacterized protein LOC101214502 [Cucumis sativus])

HSP 1 Score: 571.2 bits (1471), Expect = 1.2e-159
Identity = 293/351 (83.48%), Postives = 312/351 (88.89%), Query Frame = 1 

Query: 1   MATTLISGLSSNLKLPFLSAISS--SHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNVLSH 60
           MATTLI+ LSSNLKLP LSAISS  S FR  TQ  PFSNSP  +QTLWLNPTRN NV+SH
Sbjct: 1   MATTLIASLSSNLKLPLLSAISSSPSTFRRQTQTVPFSNSP--IQTLWLNPTRNCNVISH 60

Query: 61  NRTGFLISRKLESFTVFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFI 120
           NR+GFLISRKLESFTVFA D EAQSD R ESTMPERFRYL KE  DPPVRWPFFVAL F+
Sbjct: 61  NRSGFLISRKLESFTVFAADFEAQSDDREESTMPERFRYLAKEGSDPPVRWPFFVALPFL 120

Query: 121 LYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRS 180
           LYAWRAVLFEL NWRK V+++ GFV  +LKGALALILYVIGDPITS+IRGIETAFYTIRS
Sbjct: 121 LYAWRAVLFELGNWRKIVVNLVGFVVSLLKGALALILYVIGDPITSVIRGIETAFYTIRS 180

Query: 181 FYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISE 240
           F+S IVAYAP+ ELTTIIILASTVLAISEASAPDSV SQPYLLT+SGLAGYAAVRGYISE
Sbjct: 181 FHSSIVAYAPVSELTTIIILASTVLAISEASAPDSVRSQPYLLTLSGLAGYAAVRGYISE 240

Query: 241 PFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKK 300
           PFFWTILLCVYG+S FVKKRNDV+S LP AAVFAAIGEPWVRILAMGSFLALAI HHWK 
Sbjct: 241 PFFWTILLCVYGYSSFVKKRNDVSSALPAAAVFAAIGEPWVRILAMGSFLALAITHHWKN 300

Query: 301 VSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
           +SQG+KED  EDEK VY+ D+PLPLLGVALAIGI  AAKWAGYRHLTWMIV
Sbjct: 301 LSQGKKED--EDEKGVYRWDIPLPLLGVALAIGIHGAAKWAGYRHLTWMIV 347

[Close]
BLAST of Cla004947 vs. NCBI nr
Match: gi|694332981|ref|XP_009357101.1| (PREDICTED: uncharacterized protein LOC103947859 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 402.9 bits (1034), Expect = 5.7e-109
Identity = 213/336 (63.39%), Postives = 249/336 (74.11%), Query Frame = 1 

Query: 18  LSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNV--LSHNRTGFLISRKLE--SFT 77
           +++ S    RP  Q   F NS  K Q L  NP +       S N  GFL  RKL   +  
Sbjct: 20  VASFSPPRIRPHIQTISFRNS-LKFQCL--NPIQAQKFPGFSGNTNGFLFDRKLRVCASA 79

Query: 78  VFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWRAVLFELANWR 137
              G   A+ + +GESTMPERFRYLTKEAPDPPVRWP+FVAL F++YAWRAVL ELANW+
Sbjct: 80  KNEGVDAAEDESKGESTMPERFRYLTKEAPDPPVRWPWFVALVFLIYAWRAVLLELANWK 139

Query: 138 KAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSGIVAYAPIPELT 197
           KA + +  FVGY+LK  LALI + IGDPITS+IR IET  Y IRSFYSGIVAYAPIPELT
Sbjct: 140 KAAVGVVRFVGYLLKLILALIFHFIGDPITSVIRFIETTLYAIRSFYSGIVAYAPIPELT 199

Query: 198 TIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFWTILLCVYGFSR 257
           T+IILAS VLAI+EA  P++V+ QP+LLT SG+ GYAAV GYISEPFFWTIL+  YG+SR
Sbjct: 200 TVIILASIVLAIAEAVVPNAVNCQPFLLTASGVVGYAAVAGYISEPFFWTILVGFYGYSR 259

Query: 258 FVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQGQKEDEVEDEKA 317
            VKKR+DVTS LP AAV AAIGEPWVR+L + S+LALAI+HH KKVS+ ++E  V D K 
Sbjct: 260 LVKKRDDVTSALPAAAVMAAIGEPWVRVLVIASYLALAIFHHSKKVSEKKEEIVVTDRK- 319

Query: 318 VYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
                +P+PLLG  LAIGIR AAKWAGYRHLTWMIV
Sbjct: 320 -----LPMPLLGAGLAIGIRLAAKWAGYRHLTWMIV 346

[Close]
BLAST of Cla004947 vs. NCBI nr
Match: gi|694332979|ref|XP_009357100.1| (PREDICTED: uncharacterized protein LOC103947859 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 400.6 bits (1028), Expect = 2.8e-108
Identity = 212/336 (63.10%), Postives = 248/336 (73.81%), Query Frame = 1 

Query: 18  LSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNV--LSHNRTGFLISRKLE--SFT 77
           +++ S    RP  Q   F NS  K Q L  NP +       S N  GFL  RKL   +  
Sbjct: 20  VASFSPPRIRPHIQTISFRNS-LKFQCL--NPIQAQKFPGFSGNTNGFLFDRKLRVCASA 79

Query: 78  VFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWRAVLFELANWR 137
              G   A+ + +GESTMPERFRYLTKEAPDPPVRWP+ VAL F++YAWRAVL ELANW+
Sbjct: 80  KNEGVDAAEDESKGESTMPERFRYLTKEAPDPPVRWPWLVALVFLIYAWRAVLLELANWK 139

Query: 138 KAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSGIVAYAPIPELT 197
           KA + +  FVGY+LK  LALI + IGDPITS+IR IET  Y IRSFYSGIVAYAPIPELT
Sbjct: 140 KAAVGVVRFVGYLLKLILALIFHFIGDPITSVIRFIETTLYAIRSFYSGIVAYAPIPELT 199

Query: 198 TIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFWTILLCVYGFSR 257
           T+IILAS VLAI+EA  P++V+ QP+LLT SG+ GYAAV GYISEPFFWTIL+  YG+SR
Sbjct: 200 TVIILASIVLAIAEAVVPNAVNCQPFLLTASGVVGYAAVAGYISEPFFWTILVGFYGYSR 259

Query: 258 FVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQGQKEDEVEDEKA 317
            VKKR+DVTS LP AAV AAIGEPWVR+L + S+LALAI+HH KKVS+ ++E  V D K 
Sbjct: 260 LVKKRDDVTSALPAAAVMAAIGEPWVRVLVIASYLALAIFHHSKKVSEKKEEIVVTDRK- 319

Query: 318 VYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
                +P+PLLG  LAIGIR AAKWAGYRHLTWMIV
Sbjct: 320 -----LPMPLLGAGLAIGIRLAAKWAGYRHLTWMIV 346

[Close]
BLAST of Cla004947 vs. NCBI nr
Match: gi|703096399|ref|XP_010095833.1| (hypothetical protein L484_022189 [Morus notabilis])

HSP 1 Score: 400.2 bits (1027), Expect = 3.7e-108
Identity = 215/347 (61.96%), Postives = 262/347 (75.50%), Query Frame = 1 

Query: 12  NLKLPFLSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNV--LSHNRTGFLISRKL 71
           NLK    S I++  FR  ++   FS+SP K+Q+   NP    N+   S  R   L  RK 
Sbjct: 17  NLKFTCRSPITT-RFR--SRFVTFSSSPTKLQSF--NPLSADNLDGFSGKRPELLFGRKF 76

Query: 72  ESFTVFAGDS-------EAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAW 131
                   D        E + + RGEST+PERFRYLT+EAPD P+RWP+FVA+AF++YAW
Sbjct: 77  WVCLAAKNDDKGDEIDEEGEKEARGESTLPERFRYLTEEAPDLPLRWPWFVAVAFLIYAW 136

Query: 132 RAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSG 191
           R VLFEL NW+KA ++I  F GY+LK  LAL+++ IGDPITS+IR +ETA YT+R++YSG
Sbjct: 137 RTVLFELYNWKKAAIAIVRFAGYLLKLLLALMIHFIGDPITSLIRCVETALYTVRAYYSG 196

Query: 192 IVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFW 251
           IVAYAP+PELTTIIIL+S VLAI+EA+ PDSVSSQP++LTISGL GYAAVRGYISEPFFW
Sbjct: 197 IVAYAPVPELTTIIILSSAVLAIAEATVPDSVSSQPHILTISGLIGYAAVRGYISEPFFW 256

Query: 252 TILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQG 311
           T+L+ +Y FSR VKKR+DV++ LPVAAV AAIGEPWVR+LAM S+LALAI HH KK+ +G
Sbjct: 257 TLLVGLYTFSRLVKKRDDVSAALPVAAVLAAIGEPWVRVLAMASYLALAISHHSKKLREG 316

Query: 312 QKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMIV 350
            KE EV     V  R +PLPLLGVALAIGIR AAKWAGYRHLTWM+V
Sbjct: 317 -KEKEV-----VAARKLPLPLLGVALAIGIRIAAKWAGYRHLTWMVV 352

The following BLAST results are available for this feature:
BLAST of Cla004947 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM42_CUCSA8.4e-16083.48Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141030 PE=4 SV=1[more]
W9R094_9ROSA2.6e-10861.96Uncharacterized protein OS=Morus notabilis GN=L484_022189 PE=4 SV=1[more]
A0A0D2VAK8_GOSRA3.4e-10860.51Uncharacterized protein OS=Gossypium raimondii GN=B456_013G073800 PE=4 SV=1[more]
M5X5M3_PRUPE3.4e-10862.39Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008067mg PE=4 SV=1[more]
A0A0B0P998_GOSAR9.1e-10665.58Uncharacterized protein OS=Gossypium arboreum GN=F383_25029 PE=4 SV=1[more]
BLAST of Cla004947 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074285|ref|XP_008437523.1|1.2e-16786.61PREDICTED: uncharacterized protein LOC103482911 [Cucumis melo][more]
gi|449456317|ref|XP_004145896.1|1.2e-15983.48PREDICTED: uncharacterized protein LOC101214502 [Cucumis sativus][more]
gi|694332981|ref|XP_009357101.1|5.7e-10963.39PREDICTED: uncharacterized protein LOC103947859 isoform X2 [Pyrus x bretschneide... [more]
gi|694332979|ref|XP_009357100.1|2.8e-10863.10PREDICTED: uncharacterized protein LOC103947859 isoform X1 [Pyrus x bretschneide... [more]
gi|703096399|ref|XP_010095833.1|3.7e-10861.96hypothetical protein L484_022189 [Morus notabilis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071840 cellular component organization or biogenesis
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0009409 response to cold
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU52011watermelon EST collection version 2.0transcribed_cluster
WMU73020watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla004947Cla004947.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU73020WMU73020transcribed_cluster
WMU52011WMU52011transcribed_cluster