CmoCh11G020480 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAGAATTAAATGAGGAGGTAAGGGGCTTCTCCGTTGCCGCCCTAATTGTATGCACTCTTCCAACCCTTGGACGGACCGGCGATTGCAGATTCAATTTTCCGTTACCATCGATCTCTCGACGCCGATACCAGCCGCCGCTCTGGTTAGGGTTAGCTTCCTCCTGCCTTCGACTTCTCTTCCAAACGCTATCACCAAATACTTCCCTCCCTCACTTTCACTAGTCGCTGCCCAGTGCCCTCCAAGGTATGTTAGAGAGTACACATTCGCCTTTATTTCTCTTTTCTTCTTGTTTTCTTTAAGTCGCCTTGTTGGAAAAATCCGCAGTAGAAGAACTTTTTTAATGTGAGGTTACAAGTGCCCAAACATCTTGGTAATTAGATGTTTCCGTAGTTGCGGACGGATATAGTGGCTTTATCTTCGTGATCGATTTCGGCATAATTCACATTTTTTTTCTAAGTTTCCATGAAACATTTTTGCAATTGAAAAATGTTTGATTTCCCTATCGCTGTTTGTTGGTCGACGACTACGACTATTGGCTCAATCTATGGCCACTATGAATTCTATTCCTTTTCTTTGTTACACTTGACACATAAAGAGCGAGATTAACATTGAATACAATATGTTTGCTTTTGCATCACCTGCATCAGATGCTATTTTTCCATAGTAGGTAAGGCCAATGGGTTAGAGTGAAGCTTCCTAATTGACATGGTCAAAGAAATCCTATAATTACAACAAAAAAAAAAAAAAAAAAGTTGTATCACTCAATCAGATAATATTTTAGGAAATCAATATACCAACATATAATTTCGTCGTCACTGATTTTTTCGACACCGTTATCCATTATACATGCTCATTTAGGAAATCAGATAATATTTTCTTGAGAGGCTTGGTTCACAATTCATCTGCCTTTTTCTTCCAACTGATCTTCTCATTTACTGAAACTTGAGAGGTCTTCCTTGGCTCAACAATTTACTTAGACTTGAGAGGTGTAGCTAATGTAAGTTTGGTTCTAATTGTCTCTGATCTCGCTGTTCATAGTTCTTTTGGTTTTCATATGTTATCAATCTGTTGACAAGATATCCGTTAAATTAAGTTTTGCATGTATTTGAGTTCTAGAGTGATAATTGTACTATATTGTTGTATTTTTCAAATAATAATGCTTTTTAGGTCTCATGCATACTACTGAACTTACTACTTCTATTCTTCTTTCTCCCTTTCACTTTTATCATCCCACACAGTAATATCCAGCAAGTGAATGAGAAAATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGGTAATAGCTTTCATGGTCATGGTTTAAACAAGTTAAGCAAGAAAGAAAGATCATTGCTTCTAAACATATTCAGATCATCTGTGCCAGATGAATGGATAAATAACTCCTAACAACTTCAGGGACAACTGCTTTGATCGTCGTACTCTGCCCTTCATAAGGTATTTTGATAGTTCTACTGTTCCATTGTAGTTTTCTTATTTAGGGTTTAAAAATATACTTAATTTATTATGAAATTATAAAGATAGGGGTATTATAGTTCTCTTTTATCATCCATAACAAGGCGTATAAAAATGGTCAATGGTAAGTGGTAACATGATCTTATGGAGTTGTTTCAGGATCTTATAAGGTTCACAAAGTTGGAACATGAGAATGACAGAAATGCGACTTTTATATTAGTAGGATAAGGTACTTTTGGATAATAGTCTATCATTGATGGGCTAATTTACAAATTTTGATAGCTCAAATAGTTATGATAGATTTATTCAGTTTATTCCAAATCGTTGATATATATTTTTTAAACCATGTTTAGAGTTCTGATGCGACAGCTTGTGCGGTGATTAAGAATTTGATTTCAGTTATAGATTGATTTTAATTCTTAAACGATAATAAACTTGTTTTAAATTGCAAATTGGCAATTGACCGAGTTATTAATTGTCTTTAAGCAATAGATTTTTATGGGCATCATGTTCAATATTAATTGAGTTTCTGATTCTTTTTCCAAGTTCAAACTGTAAGTTGGTGGAACAAATGAAAGTAGTTGTGTTGAATATTTTTCTAATTGTCACTAAACTATAGTAAATTGCAATTTTTTTGCTGGATTGATCAGGCCTTTTTGTTTCTTTTCAGAACCTGTTGCCAAATTGTAGATGGAGAAGAAGAGAGAAAAAGTAGATGATGAAGGGTAACCGACAATTATAGTAGACTGTTGGAAACAGGTTGTTAAAAATGTTTGGGCCAGAGGTGGAGGGCCCCTCCGGAGGTCCACCGGAGGGGCCATTCTTAAACAACAGCCCATGCTTGTTGCTCCCTGCAGATGACCCGTTTCCGTCAGGTGGCCGCCATTACTCATCACATCCAAATTCTGAACTTTAAAACATCTCTTTCTACTTTTCAAATTTTTATTGATGCTATGTAAGTGCTATTCATTACTATTTCTCTCTTCTAAAGCCAGAAGTAAATTCTTTCTTTTTTGGCCCATTTGAACAGGTAAAGACATAAATAGTCCCTTTAGTTTGGTCAAAAGTTTGAATCTTGTTCACACTGTTACGTTCTCGAGGAAAAGATGGACGCCATTAGTTTTTTGCAGTTTTGGATTTTGAAGTAATTTTGGTGTTACGAAGTTGATTTTAATTACTAACTCACTTACC GCAGAATTAAATGAGGAGGTAAGGGGCTTCTCCGTTGCCGCCCTAATTGTATGCACTCTTCCAACCCTTGGACGGACCGGCGATTGCAGATTCAATTTTCCGTTACCATCGATCTCTCGACGCCGATACCAGCCGCCGCTCTGGTTAGGGTTAGCTTCCTCCTGCCTTCGACTTCTCTTCCAAACGCTATCACCAAATACTTCCCTCCCTCACTTTCACTAGTCGCTGCCCAGTGCCCTCCAAGTAATATCCAGCAAGTGAATGAGAAAATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGGTAATAGCTTTCATGGTCATGGTTTAAACAAGTTAAGCAAGAAAGAAAGATCATTGCTTCTAAACATATTCAGATCATCTGTGCCAGATGAATGGATAAATAACTCCTAACAACTTCAGGGACAACTGCTTTGATCGTCGTACTCTGCCCTTCATAAGAACCTGTTGCCAAATTGTAGATGGAGAAGAAGAGAGAAAAAGTAGATGATGAAGGGTAACCGACAATTATAGTAGACTGTTGGAAACAGGTTGTTAAAAATGTTTGGGCCAGAGGTGGAGGGCCCCTCCGGAGGTCCACCGGAGGGGCCATTCTTAAACAACAGCCCATGCTTGTTGCTCCCTGCAGATGACCCGTTTCCGTCAGGTGGCCGCCATTACTCATCACATCCAAATTCTGAACTTTAAAACATCTCTTTCTACTTTTCAAATTTTTATTGATGCTATGTAAGTGCTATTCATTACTATTTCTCTCTTCTAAAGCCAGAAGTAAATTCTTTCTTTTTTGGCCCATTTGAACAGGTAAAGACATAAATAGTCCCTTTAGTTTGGTCAAAAGTTTGAATCTTGTTCACACTGTTACGTTCTCGAGGAAAAGATGGACGCCATTAGTTTTTTGCAGTTTTGGATTTTGAAGTAATTTTGGTGTTACGAAGTTGATTTTAATTACTAACTCACTTACC ATGCACTCTTCCAACCCTTGGACGGACCGGCGATTGCAGATTCAATTTTCCGTTACCATCGATCTCTCGACGCCGATACCAGCCGCCGCTCTGGTTAGGGTTAGCTTCCTCCTGCCTTCGACTTCTCTTCCAAACGCTATCACCAAATACTTCCCTCCCTCACTTTCACTAGTCGCTGCCCAGTGCCCTCCAAGTAATATCCAGCAAGTGAATGAGAAAATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGGTAATAGCTTTCATGGTCATGGTTTAAACAAGTTAAGCAAGAAAGAAAGATCATTGCTTCTAAACATATTCAGATCATCTGTGCCAGATGAATGGATAAATAACTCCTAA
BLAST of CmoCh11G020480 vs. TrEMBL
Match: M5XB29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012313mg PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27 Identity = 77/171 (45.03%), Postives = 107/171 (62.57%), Query Frame = 1
BLAST of CmoCh11G020480 vs. TrEMBL
Match: E0CU37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00370 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26 Identity = 81/177 (45.76%), Postives = 107/177 (60.45%), Query Frame = 1
BLAST of CmoCh11G020480 vs. TrEMBL
Match: A5AM71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007604 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25 Identity = 86/211 (40.76%), Postives = 120/211 (56.87%), Query Frame = 1
BLAST of CmoCh11G020480 vs. TrEMBL
Match: A9PJK4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 8.5e-23 Identity = 76/183 (41.53%), Postives = 107/183 (58.47%), Query Frame = 1
BLAST of CmoCh11G020480 vs. TrEMBL
Match: B9GT26_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05980g PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22 Identity = 76/183 (41.53%), Postives = 105/183 (57.38%), Query Frame = 1
BLAST of CmoCh11G020480 vs. TAIR10
Match: AT1G06500.1 (AT1G06500.1 unknown protein) HSP 1 Score: 71.2 bits (173), Expect = 9.3e-13 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 1
BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|645246608|ref|XP_008229431.1| (PREDICTED: uncharacterized protein LOC103328797 [Prunus mume]) HSP 1 Score: 130.2 bits (326), Expect = 4.8e-27 Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 1
BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|595927153|ref|XP_007215066.1| (hypothetical protein PRUPE_ppa012313mg [Prunus persica]) HSP 1 Score: 130.2 bits (326), Expect = 4.8e-27 Identity = 77/171 (45.03%), Postives = 107/171 (62.57%), Query Frame = 1
BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|731409249|ref|XP_010657121.1| (PREDICTED: protein NLP3 [Vitis vinifera]) HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26 Identity = 81/177 (45.76%), Postives = 107/177 (60.45%), Query Frame = 1
BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|470136188|ref|XP_004303879.1| (PREDICTED: uncharacterized protein LOC101310432 [Fragaria vesca subsp. vesca]) HSP 1 Score: 125.9 bits (315), Expect = 9.0e-26 Identity = 73/161 (45.34%), Postives = 102/161 (63.35%), Query Frame = 1
BLAST of CmoCh11G020480 vs. NCBI nr
Match: gi|147810074|emb|CAN71458.1| (hypothetical protein VITISV_007604 [Vitis vinifera]) HSP 1 Score: 125.2 bits (313), Expect = 1.5e-25 Identity = 86/211 (40.76%), Postives = 120/211 (56.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |