CmoCh09G013370 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGCAGAGGGCGCCCTTCCCTTTCTTCTTCCTTTCTCTTTGCCGTCTCCAATTTCTCTTTGCCGCCGCCGCCCCTCCCTCTCTTCACTCTCTATTGTTCAACGATTTGCCGCATCGGCGCCACCCTATCCTTATCAACCTCCTCCCCTCACACCCGGACGCTAGTAGGGTGAACGTTGGGTCGGTTTCCAGTTTTGGCAACCTCCATATCACAAGGCAAGTCTGTATGATATTTTTGTTTCTAATCCAAATATTTTATTTGAGCTTTCAAGCCCTAAATAAAACCATCCGCCACTTTCTAATTGATTTTGCAGTTCTAGCGGCGTTAACGATTTCGGACCCGTTATCGAGGCCAGCCAATTAATCATGGTATCTCTCTACTTTCTTTCTCTTCTCCTCTCATTTGATGGTGGATCGATTTCTAAGATAATGAGAAAATGATATTGAATCAGGAGCGGTTGTATAAACATAATTTATTTTGTTAGTTTTATCTGAAATATTATGTATCCGTCTCCTCCGTTTGGTAATTTGTTTCCAGAATGATTATGGATTATGGGTTTAATTCAAACTTTCATTTCGTTCCCAAATTTTCTCTGGCTGAAGTTTCGTCTAGGGGAATATTGTGTATCCGTCTCCTTCATATTTATTCTGAACATATTGGGTTCTTGATGCTTGTTTCTTGCCCTCTGCGCCTTTTAAAGCCATTTGAAATCAAGCATATTCGAAGTGTGTTTGTATATCTTGTGTCATATTATCTCTCTCTTGAGTGTACATTGATCTTTTTACCAATCAAATCAGTGCTATTCTAATTAGAACTCATGTATTTACTCCTGCTTTGTCGATAACTTCAATTTTGACAGAGGAGAGGAGTAGATATTGTATTGCATAATTTTAAGATCGTCTTATTCAGTTTGAAAACTTCCCATAAGAGAGCCTCTTTGCTTGTATGTATTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAGTAAGTACACTCTTTTTATTCCACCCTTGGGTTTTTATCTCTATTGGAAGTTGGCCAATTTTTCCTCAATATTATGGTTATTGGTGTAAATTTTTTTGGATGGCTTGATTGAAACTTGACATGTAGAACAAAAGAAACTTGCGCCTTGTCTTTGAACTATTAGAAGCTTTAATGTAAATGGGGTAAGTTTGGGGACAAGCATTTTGCCAATGAGAACAAAGCTCTGTGTGCACATAGGTTAATTTTGCTTCAGGTGATATTGGAATAGACATCATTTTTTTTTTAAATGTGCTTGGGGGATGTTAACATCCTGAAGTTCTATCTTTTACATCCTTCGTCGTCTTTGAAAGCGAGAATAATGCCTTCTTAGATTTTCTATAATTGGTCAAGAGAATTTGTTATTTTTTAGCCTGTGATATGTTCAAGGGTTGAGTGTTAATGGCTTGGATTATAGCATCCTATAGTTCCATTGTAACAGCCCAAGCTCACAGATATTGTCTTCTTTGTAGGCTTTTCCTTTCGATCTTCCCCTCAAGGTTTTTAAAACTTTAAAACACCTCTGTTGAAGAGGTTTCTACACCCTTATAAAGAATGTTTTGATCTCCTTCCTAACCAATGTGGGATCTTACAATCCACCCTCTTTTGGGGTCTAGCGAACGCTGGGGCTCTTTCCCTTTTCCAATCGATGTGGGACCCCTCCAATCCATCCCCTTCGGGGCCCAGTGTTCTTGCTGGCACACTGCCTCATGTCTACCCCATTCAGGGCTCAGCCTCATTGCTGGCACATCACCTAGTGTCTGGCTCTCGTACCATTTGTAAGGGCCCAAGCCCATTGCTAGCATATATTGTCCTCTTTGGGCTTTTCCTTTTGGGCTTCTCCTCAAGGTTTTTAAAACGTGTGCGCTAGGGAGAGGTTTTCACACCCTTACAAAGAATGTTTCGTTCTCCTCTCTAACCAACATGGGATCTTACATCCATCCTTTACCTTTATGGGATCTTACATCCATCCTTTACCTTTATGGTCAAGCTTGAAAGACTAAATATTATCTTCCTCGATCTTTTGAAAAAATGTTATTATTTCTCGAGCATGTGGTGTGAGAAGTGATTTACGGACCACAATTTGGTTAGAGATGTTTCGGTGTAGTGTTGTAATCTATTGAACACGTACTTGGATAAATGTAGTTGTTTATACAAAGTTTGTACTTTTTAATGAGGGAGAGTTTGATATTGTAGTTGAAGATGATTATGCTGAATAACAAATCTTTTTTCGTGTGGTGTAGATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTGTGAAGGTCAAATATCTATTGCTTTTCACTAAAATAAGTTCCTTAGCTTGTATATATTATTACGAATAGGTGTTTGACAATCCTTGTTATCTTTTCAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTTTGCCCATTTAGTGTTCTTGTATAATTCTTAATTTTGTGATGGCCGGCAGCATGGCATGATTGATGATGAAATTGATGTATAATCTTTTCTTCCTCTTGTGGGAAAAAGTGACGTTTAAAATAGTATTTTAGATGAGGATGCCTTGAGAGCACCTAAATTTAATTTGTTTACTTCTAATAATTTGTAAACAATTATTTGTTACGCACAGGCCTGAAGTAGACCACGATCATTGTCCGATGAAATATTGCTAATACGAGGCTCGAGTTAGAACCCTAGACTTAGAACGATTAATTCAAAAGCC CAAGCAGAGGGCGCCCTTCCCTTTCTTCTTCCTTTCTCTTTGCCGTCTCCAATTTCTCTTTGCCGCCGCCGCCCCTCCCTCTCTTCACTCTCTATTGTTCAACGATTTGCCGCATCGGCGCCACCCTATCCTTATCAACCTCCTCCCCTCACACCCGGACGCTAGTAGGGTGAACGTTGGGTCGGTTTCCAGTTTTGGCAACCTCCATATCACAAGGCAATTCTAGCGGCGTTAACGATTTCGGACCCGTTATCGAGGCCAGCCAATTAATCATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTTTGCCCATTTAGTGTTCTTGTATAATTCTTAATTTTGTGATGGCCGGCAGCATGGCATGATTGATGATGAAATTGATGTATAATCTTTTCTTCCTCTTGTGGGAAAAAGTGACGTTTAAAATAGTATTTTAGATGAGGATGCCTTGAGAGCACCTAAATTTAATTTGTTTACTTCTAATAATTTGTAAACAATTATTTGTTACGCACAGGCCTGAAGTAGACCACGATCATTGTCCGATGAAATATTGCTAATACGAGGCTCGAGTTAGAACCCTAGACTTAGAACGATTAATTCAAAAGCC ATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGA
BLAST of CmoCh09G013370 vs. Swiss-Prot
Match: TIM16_DANRE (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio GN=pam16 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 6.2e-12 Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1
BLAST of CmoCh09G013370 vs. Swiss-Prot
Match: TIM16_SCHPO (Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pam16 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 1
BLAST of CmoCh09G013370 vs. Swiss-Prot
Match: TIM16_MOUSE (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus GN=Pam16 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.4e-10 Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 1
BLAST of CmoCh09G013370 vs. Swiss-Prot
Match: TIM16_HUMAN (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens GN=PAM16 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 4.5e-10 Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 1
BLAST of CmoCh09G013370 vs. Swiss-Prot
Match: TIM16_XENTR (Mitochondrial import inner membrane translocase subunit tim16 OS=Xenopus tropicalis GN=pam16 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 7.6e-10 Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = 1
BLAST of CmoCh09G013370 vs. TrEMBL
Match: A0A0A0LW69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G185100 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 8.1e-51 Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 1
BLAST of CmoCh09G013370 vs. TrEMBL
Match: A0A067LED2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23812 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 9.6e-44 Identity = 97/116 (83.62%), Postives = 105/116 (90.52%), Query Frame = 1
BLAST of CmoCh09G013370 vs. TrEMBL
Match: A0A0A0LSD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011490 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.6e-43 Identity = 97/116 (83.62%), Postives = 105/116 (90.52%), Query Frame = 1
BLAST of CmoCh09G013370 vs. TrEMBL
Match: C6T494_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 2.1e-43 Identity = 98/116 (84.48%), Postives = 103/116 (88.79%), Query Frame = 1
BLAST of CmoCh09G013370 vs. TrEMBL
Match: I1MP46_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G164700 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 3.7e-43 Identity = 97/116 (83.62%), Postives = 103/116 (88.79%), Query Frame = 1
BLAST of CmoCh09G013370 vs. TAIR10
Match: AT3G59280.1 (AT3G59280.1 Protein Transporter, Pam16) HSP 1 Score: 160.6 bits (405), Expect = 5.8e-40 Identity = 84/116 (72.41%), Postives = 97/116 (83.62%), Query Frame = 1
BLAST of CmoCh09G013370 vs. TAIR10
Match: AT5G61880.1 (AT5G61880.1 Protein Transporter, Pam16) HSP 1 Score: 135.6 bits (340), Expect = 2.0e-32 Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 1
BLAST of CmoCh09G013370 vs. NCBI nr
Match: gi|659127284|ref|XP_008463624.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 8.9e-51 Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 1
BLAST of CmoCh09G013370 vs. NCBI nr
Match: gi|449443552|ref|XP_004139541.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 1.2e-50 Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 1
BLAST of CmoCh09G013370 vs. NCBI nr
Match: gi|659106003|ref|XP_008453226.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like isoform X1 [Cucumis melo]) HSP 1 Score: 186.0 bits (471), Expect = 3.6e-44 Identity = 99/116 (85.34%), Postives = 105/116 (90.52%), Query Frame = 1
BLAST of CmoCh09G013370 vs. NCBI nr
Match: gi|802559894|ref|XP_012066242.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas]) HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43 Identity = 97/116 (83.62%), Postives = 105/116 (90.52%), Query Frame = 1
BLAST of CmoCh09G013370 vs. NCBI nr
Match: gi|778656004|ref|XP_011660201.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 2.4e-43 Identity = 97/116 (83.62%), Postives = 105/116 (90.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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