CmaCh09G012150 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G012150
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMitochondrial import inner membrane translocase subunit tim16
LocationCma_Chr09 : 8075250 .. 8077936 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTGAATCAGGAGCGGATGTATAAACATAATTTATGTTGTTAGTTTTATCTGAAATATTCTGTATCCGTCTCCTCCGTTTGGTAATTTGATTCCAGATTGATTATGGATCATGTGTTTAATTCAAAGATTCATCTCGTTCCCAAATTTTCTCTGGCCGAAGTTTTTGTCTAGGGGAATATAATGTATCCATCTCCTTCATATTTATTCTAAACATATTGGGTTCTTGATGCTGGTTTCTTTCCCTCTGCCTTTTTAAAGCCATTTGAAATCAAGCATATTCCAAGTGTGTTTGTTTATCATGTGTCATATTATCTCTCTCTTGAGTGTACATTGATCTTTTACCAATCGAATCAGTGCTATTCTTATTTACTCCTGCTTTGTCGATAACTTCAATTTTGACAGAGGAGAGGAGTAGATATTGTATTGCATAATTTTAAAATCGTCTTATTCAGTTTGACAACTTCCTATAAGAGAGCCTCTTTGCTTGTATGTATTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAGTAAGTACACTCTTTTTATTCCACTCGTGGGTTTTTATCTCTATTGGAAGTTGGCCAATTTGCCCTCAATATTATGGTTATTGGTGTATATTTTTTTTGGATGCCTTCATTGAAACTTGACATGTAGAACAAAATAACTTGCACCTTGTCTTTGAACTATTAGAAGCTTTAATGTAAATGGGGCAAGTTTGGGGACAAGCATTTTGCCAATGAGAACAAAGCTCTGTGTGCACATAGGTTAATTTTGCTTCAGGTGATATTGGAATAGACATCATTTTTTTTTAAATGTGCTTGGTGGATGTTAACATCCTGAAGTTCTATTTTTTTTAAATGCCTTAGATTTTCTATAATTGGTCAAGAGAATATGTTATTTTGTAGCCTGTGATATGTATAAGGGTTGAGTGTTAATAGCCTGCAATATAGCATCCTGTAGTTCCATTGTAACTGCCCAAGCCACAGATATTGTCTTCTTTGGGCTTTTCCTTTTGATCTTCCCCTCAACGTTTTTAAAACTTTAAAACACGTTTGTTGGAGAGGTTTCTACACCCTTGTAAAGAATGTTTCGCTCTCCTCCTTAACCGATGTGGGATCTTACAATCCACCCTCTTTTGGGGTCCAGCGGATGCTGGCACTCGTTCCATTCTCTAATTGATGTGGGACCCCCTCAATCTACCCCTTTCAGGGCTCAGCGTCCTTGCTGGCACACTGCCTCATGTCTACCCTCTCCAGGGTTCAGCCTTCTCGTTGGCACACTGCCTCATGTCTACCCCCTCCAAGACTCAGCCTTCTCGCTGGCACACTGCCTCATGTCTACCCCCTTTAGGGCTCAGCCTCCACGTTGGCACATCGCTCGATGTTTGGCTTTGATACCATTTGTAAGAGCCCAGGCCCACCACTAGTATATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCTCCCCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCACACCCTTACAAAGAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACATCCATCCTTTACCTTTATGGTCAAGCTTGAAAGACTAAATATTATCTTCCTCATCTTTGAAAAAAATGTTTTTATTTCTCGAGCATGTGGTGTGAGAAGTGATTTACGGACCACAATTTGGTTAGAGATGCTTCGGTGTAGTTGTGTTGTAATCTATTGAACATGCACTTGGATAAATGTAGTTGTTTATACCAAGTTTGTACTTTTTAATGAGGGAGAGTTTGATATTGTAGTTGAAGATGATTATGCTGGATAACAAGTCTTTTTTCGTGTGGTGTAGATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCTCCCCGGAAACGCCTTGGGAGGAAATTGTGAAGGTCAAATATCTATTGCTTTTCACTAAAATAAGTTCCTTACCTTGTATATATCATTATGAATAGGTCTTTGACAATCCTTGTTATCTTTTCAGAAATATGACGCTTTGTTCGAAAAGAATACCCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTTTGCAAATTTAGTGTTCTTGTATAATTCTTAATTTTGTGATGGCCGGCAGCATGGCATGATTGATGAAATTGATGTATAATCTTTTCTTCCTCTTGTGGGAAAAAGTGACGTTTAAAATAGTATTTTTGATCAGGATGGCTTGAGAGCACCTAAATTTAATTTGTTTACTTCTAATAATTTGTAAACAATTATTTGTTACGCACATGCCTGAAGTAGAGCACGGTCATTGTCCGATGAAATATTGCTAATACGAGGCTCGAGTTAGAACCCTAGACTTAGAACGATTAATTCAAAAGCCTTCCTCTCATATTATTGTTGATTTAGGATTTTAATTCAATCTTCGAGCTGATCATGGCATTTTCTTTTTCTAATTAATTTTCAGTAAAAGAGTGTATATATAAAGGAACCGA

mRNA sequence

ATGAATATTGAATCAGGAGCGGATGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCTCCCCGGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTCGAAAAGAATACCCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTTTGCAAATTTAGTGTTCTTGTATAATTCTTAATTTTGTGATGGCCGGCAGCATGGCATGATTGATGAAATTGATGTATAATCTTTTCTTCCTCTTGTGGGAAAAAGTGACGTTTAAAATAGTATTTTTGATCAGGATGGCTTGAGAGCACCTAAATTTAATTTGTTTACTTCTAATAATTTGTAAACAATTATTTGTTACGCACATGCCTGAAGTAGAGCACGGTCATTGTCCGATGAAATATTGCTAATACGAGGCTCGAGTTAGAACCCTAGACTTAGAACGATTAATTCAAAAGCCTTCCTCTCATATTATTGTTGATTTAGGATTTTAATTCAATCTTCGAGCTGATCATGGCATTTTCTTTTTCTAATTAATTTTCAGTAAAAGAGTGTATATATAAAGGAACCGA

Coding sequence (CDS)

ATGAATATTGAATCAGGAGCGGATGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCTCCCCGGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTCGAAAAGAATACCCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGA

Protein sequence

MNIESGADAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS
Homology
[Close]
BLAST of CmaCh09G012150 vs. Swiss-Prot
Match: TIM16_DANRE (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio GN=pam16 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-12
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1 

Query: 10  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 69
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 70  ILGVSPETPWEEIVKKYDALFEKNTQT--GSFYLQSKVHRAKERLE 112
           IL +S  TP EEI K Y+ LF+ N +   GSFY+QSKV RAKERL+
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106

[Close]
BLAST of CmaCh09G012150 vs. Swiss-Prot
Match: TIM16_SCHPO (Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pam16 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11
Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 1 

Query: 11  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNT---VRRASKVMTEQEARQ 70
           + +   I++GS ++++AFVQAY+Q + NA++    Q     +   VRR    MT QEA  
Sbjct: 5   RAVGRFIIVGSQVMSKAFVQAYKQMIANAAQQSTGQAAASKSSTAVRRGE--MTIQEAGS 64

Query: 71  ILGVSPETPWE-EIVKKYDALFEKN--TQTGSFYLQSKVHRAKERLETLYQSKGQD 121
           IL + PE+  E E+ K++  +FE N   + GSFYLQSKV RA E+L++    K Q+
Sbjct: 65  ILNIKPESLEEGELEKRFQKMFEINDPKKGGSFYLQSKVFRAHEKLKSELDQKIQE 118

[Close]
BLAST of CmaCh09G012150 vs. Swiss-Prot
Match: TIM16_MOUSE (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus GN=Pam16 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 1 

Query: 10  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQ 69
           AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 70  ILGVSPETPWEEIVKKYDALFEKNTQT--GSFYLQSKVHRAKERLETLYQSKGQD 121
           IL VS  +P EE+ K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]
BLAST of CmaCh09G012150 vs. Swiss-Prot
Match: TIM16_HUMAN (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens GN=PAM16 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 1 

Query: 10  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQ 69
           AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61

Query: 70  ILGVSPETPWEEIVKKYDALFEKNTQT--GSFYLQSKVHRAKERLETLYQSKGQD 121
           IL VS  +P EE+ K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115

[Close]
BLAST of CmaCh09G012150 vs. Swiss-Prot
Match: TIM16_XENTR (Mitochondrial import inner membrane translocase subunit tim16 OS=Xenopus tropicalis GN=pam16 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 1 

Query: 10  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 69
           AK LA ++VMG  ++ RAF +A RQ  A + A+     +   ++    +   ++ QEA+Q
Sbjct: 2   AKYLAQIMVMGMQVVGRAFTRALRQEFAASRAAAEARGRAGTESAAVSSLSGISLQEAQQ 61

Query: 70  ILGVSPETPWEEIVKKYDALFEKNTQT--GSFYLQSKVHRAKERLE 112
           IL VS  TP EEI K Y+ LF+ N +   GSFYLQSKV RAKERL+
Sbjct: 62  ILNVSKLTP-EEIQKNYEHLFKVNDKEVGGSFYLQSKVVRAKERLD 106

[Close]
BLAST of CmaCh09G012150 vs. TrEMBL
Match: A0A0A0LW69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G185100 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-49
Identity = 106/115 (92.17%), Postives = 111/115 (96.52%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ ETPWEE+ KKYDALFE+N QTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 62  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of CmaCh09G012150 vs. TrEMBL
Match: A0A067LED2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23812 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-42
Identity = 94/115 (81.74%), Postives = 103/115 (89.57%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETIQNT+R+ SKVMTEQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTIRKGSKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ ET WEEIVKKYD LFE+N + GSFYLQSKVHRAKE LE +++ KG+  PS
Sbjct: 62  LGVTEETAWEEIVKKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHRGKGEGTPS 116

[Close]
BLAST of CmaCh09G012150 vs. TrEMBL
Match: A0A0A0LSD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011490 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-42
Identity = 94/115 (81.74%), Postives = 103/115 (89.57%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILA+LIV GS ++ RA  QAY+QA+ NAS SGVAQETI+NTVRRASKVMTEQEARQI
Sbjct: 2   AAKILAHLIVSGSVVIGRAVAQAYQQAIRNASNSGVAQETIRNTVRRASKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ E PWEEIVKKYDALFE+N QTGSFYLQSKVHRAKERLETL+ SKGQD PS
Sbjct: 62  LGVTEEMPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLHHSKGQDGPS 116

[Close]
BLAST of CmaCh09G012150 vs. TrEMBL
Match: C6T494_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.6e-42
Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILANLIVMG GILARA VQAYRQALTNASK+GVAQETIQNT+RRASKVMTEQEARQI
Sbjct: 2   AAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTMRRASKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ ETPWEEI+KKYD LFE N + GSFYLQSKVHRAKE LE + Q K Q  PS
Sbjct: 62  LGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQGTPS 116

[Close]
BLAST of CmaCh09G012150 vs. TrEMBL
Match: A0A0R0KTM7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G080100 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.6e-42
Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILANLIVMG GILARA VQAYRQALTNASK+GVAQETIQNT+RRASKVMTEQEARQI
Sbjct: 3   AAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTMRRASKVMTEQEARQI 62

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ ETPWEEI+KKYD LFE N + GSFYLQSKVHRAKE LE + Q K Q  PS
Sbjct: 63  LGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQGTPS 117

[Close]
BLAST of CmaCh09G012150 vs. TAIR10
Match: AT3G59280.1 (AT3G59280.1 Protein Transporter, Pam16)

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-38
Identity = 81/115 (70.43%), Postives = 95/115 (82.61%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           A ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQI
Sbjct: 2   AGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ +T WEEI++KYD LFE N + GSFYLQSKVHRAKE LE +Y+S+G   PS
Sbjct: 62  LGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of CmaCh09G012150 vs. TAIR10
Match: AT5G61880.1 (AT5G61880.1 Protein Transporter, Pam16)

HSP 1 Score: 131.3 bits (329), Expect = 4.0e-31
Identity = 72/107 (67.29%), Postives = 87/107 (81.31%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQI
Sbjct: 2   AARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQ 116
           LGV+ ++ W+EI+KKYD LFE+N Q GSFYLQSKVHRAKE LET YQ
Sbjct: 62  LGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of CmaCh09G012150 vs. NCBI nr
Match: gi|659127284|ref|XP_008463624.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-49
Identity = 107/115 (93.04%), Postives = 111/115 (96.52%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ ETPWEE+VKKYDALFE+N QTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 62  LGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of CmaCh09G012150 vs. NCBI nr
Match: gi|449443552|ref|XP_004139541.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-49
Identity = 106/115 (92.17%), Postives = 111/115 (96.52%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ ETPWEE+ KKYDALFE+N QTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 62  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of CmaCh09G012150 vs. NCBI nr
Match: gi|659106003|ref|XP_008453226.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like isoform X1 [Cucumis melo])

HSP 1 Score: 181.4 bits (459), Expect = 9.5e-43
Identity = 96/115 (83.48%), Postives = 103/115 (89.57%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAK+LA+LIV GS I+ RA  QAY+QAL NASKSGVAQETIQNTVRRASKVMTEQEARQI
Sbjct: 2   AAKVLAHLIVSGSVIIGRAIAQAYQQALRNASKSGVAQETIQNTVRRASKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ E PWEEIVKKYD+LFE+N QTGSFYLQSKVHRAKERLETLY SK QD PS
Sbjct: 62  LGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS 116

[Close]
BLAST of CmaCh09G012150 vs. NCBI nr
Match: gi|802559894|ref|XP_012066242.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas])

HSP 1 Score: 179.5 bits (454), Expect = 3.6e-42
Identity = 94/115 (81.74%), Postives = 103/115 (89.57%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETIQNT+R+ SKVMTEQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTIRKGSKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ ET WEEIVKKYD LFE+N + GSFYLQSKVHRAKE LE +++ KG+  PS
Sbjct: 62  LGVTEETAWEEIVKKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHRGKGEGTPS 116

[Close]
BLAST of CmaCh09G012150 vs. NCBI nr
Match: gi|778656004|ref|XP_011660201.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 6.1e-42
Identity = 94/115 (81.74%), Postives = 103/115 (89.57%), Query Frame = 1 

Query: 9   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 68
           AAKILA+LIV GS ++ RA  QAY+QA+ NAS SGVAQETI+NTVRRASKVMTEQEARQI
Sbjct: 2   AAKILAHLIVSGSVVIGRAVAQAYQQAIRNASNSGVAQETIRNTVRRASKVMTEQEARQI 61

Query: 69  LGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 124
           LGV+ E PWEEIVKKYDALFE+N QTGSFYLQSKVHRAKERLETL+ SKGQD PS
Sbjct: 62  LGVTEEMPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLHHSKGQDGPS 116

The following BLAST results are available for this feature:
BLAST of CmaCh09G012150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIM16_DANRE2.3e-1248.11Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio GN=... [more]
TIM16_SCHPO7.3e-1139.66Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharom... [more]
TIM16_MOUSE1.2e-1042.61Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus GN... [more]
TIM16_HUMAN1.6e-1042.61Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens GN... [more]
TIM16_XENTR2.1e-1045.28Mitochondrial import inner membrane translocase subunit tim16 OS=Xenopus tropica... [more]
BLAST of CmaCh09G012150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW69_CUCSA2.1e-4992.17Uncharacterized protein OS=Cucumis sativus GN=Csa_1G185100 PE=4 SV=1[more]
A0A067LED2_JATCU2.5e-4281.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23812 PE=4 SV=1[more]
A0A0A0LSD2_CUCSA4.3e-4281.74Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011490 PE=4 SV=1[more]
C6T494_SOYBN5.6e-4282.61Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A0R0KTM7_SOYBN5.6e-4282.61Uncharacterized protein OS=Glycine max GN=GLYMA_02G080100 PE=4 SV=1[more]
BLAST of CmaCh09G012150 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59280.11.5e-3870.43 Protein Transporter, Pam16[more]
AT5G61880.14.0e-3167.29 Protein Transporter, Pam16[more]
BLAST of CmaCh09G012150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127284|ref|XP_008463624.1|2.3e-4993.04PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
gi|449443552|ref|XP_004139541.1|3.0e-4992.17PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
gi|659106003|ref|XP_008453226.1|9.5e-4383.48PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like is... [more]
gi|802559894|ref|XP_012066242.1|3.6e-4281.74PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatrop... [more]
gi|778656004|ref|XP_011660201.1|6.1e-4281.74PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like [C... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005341Tim16
IPR013785Aldolase_TIM
Vocabulary: Cellular Component
TermDefinition
GO:0005744mitochondrial inner membrane presequence translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G012150.1CmaCh09G012150.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 8..117
score: 2.0
IPR013785Aldolase-type TIM barrelGENE3DG3DSA:3.20.20.70coord: 3..51
score: 4.
NoneNo IPR availablePANTHERPTHR12388:SF1SUBFAMILY NOT NAMEDcoord: 8..117
score: 2.0
NoneNo IPR availablePFAMPF03656Pam16coord: 13..118
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh09G012150CmoCh09G013370Cucurbita moschata (Rifu)cmacmoB029
CmaCh09G012150Cp4.1LG06g10170Cucurbita pepo (Zucchini)cmacpeB062
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G012150Cucumber (Chinese Long) v3cmacucB0037
CmaCh09G012150Watermelon (97103) v2cmawmbB036
CmaCh09G012150Wax gourdcmawgoB0010
CmaCh09G012150Wax gourdcmawgoB0011
CmaCh09G012150Wax gourdcmawgoB0012
CmaCh09G012150Cucumber (Gy14) v1cgycmaB0087
CmaCh09G012150Cucumber (Gy14) v1cgycmaB0658
CmaCh09G012150Wild cucumber (PI 183967)cmacpiB030
CmaCh09G012150Wild cucumber (PI 183967)cmacpiB031
CmaCh09G012150Cucumber (Chinese Long) v2cmacuB030
CmaCh09G012150Melon (DHL92) v3.5.1cmameB010
CmaCh09G012150Melon (DHL92) v3.5.1cmameB011
CmaCh09G012150Watermelon (Charleston Gray)cmawcgB030
CmaCh09G012150Watermelon (97103) v1cmawmB016
CmaCh09G012150Bottle gourd (USVL1VR-Ls)cmalsiB033
CmaCh09G012150Cucumber (Gy14) v2cgybcmaB579
CmaCh09G012150Cucumber (Gy14) v2cgybcmaB580
CmaCh09G012150Melon (DHL92) v3.6.1cmamedB011
CmaCh09G012150Melon (DHL92) v3.6.1cmamedB012