CmoCh09G006890 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACCACATGACCAACATAATGCCCAATTCAACCACTCTGCTATTCCAACGGTAACTTATCACTGTCTTCTTCCTCCTCTCTCCCTTCCTCTGCATTTCTCCACACCATTAAAGACAGATTCGAGCTTTTCAGCTGAACCAGAGCTCCGAAGAAGAAGAAGAAGAAGATCCCAAATGAATATGCGGTCATGGGAAGACGACGAGGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGACAACTCCGCCTTTGATTTTGATTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCCCGGCCTTACCAGTCCATGGATTTGGATTTGATTACCCCCATCAAGCTTCCTTCCGATTCCGAAATGGTTGCGTCGGAGAAGACGATGGCGGAGAAGAACAGCTTGAAGGAAGCTACCTCCAACCTCAAGAAGAAGCTTCTCTCCAATGGCGTCAGCATCCGTTTCGGGATCTCGAAAAGCAACAGGAAGATGAAGAAGATGAAGAACAAGAAATTGGCGGCTGATTTCTCCCCCAAACCTCTGCAACCTGCTGCTTGCTACCCACATAACAAAAAGGTGCTTAGTTTTGAGTATTGATTCTGTTTCAGTAAGATCTGGGTATATTGTTCTTGGTGTTCTTGATGTTCTTCACTGCAATTTAACTTCCAATTCCATGAATGTTCAGGCATGGAGCAAGCTGCTGAAAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGGATCCTGCATCTCAAATGAAACTCTATTTCTAAAGCAATGATTCACAGAATCATCATTTTACAGTGGTCTTATTTCATTTCCTCTGTTTTTTGAAGAACAGAATATGTGTAATTAACTTTATTCCATAGATTTGTTCCATAGATTCTCATGAAAAAGCAGACCCATAAACAAAGAGATTCATGGGATCGGATTAAGCCAACATGGTATCAATCAAATTCTGAAATGAAATGTAAGAGGAACCACCATGAATGACGGCGTTTCTACTTTTCCGGCTAATTTCTTTCATTCTCTTCCTCACCTCCTCCCCTGCT CCACCACATGACCAACATAATGCCCAATTCAACCACTCTGCTATTCCAACGGTAACTTATCACTGTCTTCTTCCTCCTCTCTCCCTTCCTCTGCATTTCTCCACACCATTAAAGACAGATTCGAGCTTTTCAGCTGAACCAGAGCTCCGAAGAAGAAGAAGAAGAAGATCCCAAATGAATATGCGGTCATGGGAAGACGACGAGGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGACAACTCCGCCTTTGATTTTGATTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCCCGGCCTTACCAGTCCATGGATTTGGATTTGATTACCCCCATCAAGCTTCCTTCCGATTCCGAAATGGTTGCGTCGGAGAAGACGATGGCGGAGAAGAACAGCTTGAAGGAAGCTACCTCCAACCTCAAGAAGAAGCTTCTCTCCAATGGCGTCAGCATCCGTTTCGGGATCTCGAAAAGCAACAGGAAGATGAAGAAGATGAAGAACAAGAAATTGGCGGCTGATTTCTCCCCCAAACCTCTGCAACCTGCTGCTTGCTACCCACATAACAAAAAGGCATGGAGCAAGCTGCTGAAAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGGATCCTGCATCTCAAATGAAACTCTATTTCTAAAGCAATGATTCACAGAATCATCATTTTACAGTGGTCTTATTTCATTTCCTCTGTTTTTTGAAGAACAGAATATGTGTAATTAACTTTATTCCATAGATTTGTTCCATAGATTCTCATGAAAAAGCAGACCCATAAACAAAGAGATTCATGGGATCGGATTAAGCCAACATGGTATCAATCAAATTCTGAAATGAAATGTAAGAGGAACCACCATGAATGACGGCGTTTCTACTTTTCCGGCTAATTTCTTTCATTCTCTTCCTCACCTCCTCCCCTGCT ATGAATATGCGGTCATGGGAAGACGACGAGGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGACAACTCCGCCTTTGATTTTGATTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCCCGGCCTTACCAGTCCATGGATTTGGATTTGATTACCCCCATCAAGCTTCCTTCCGATTCCGAAATGGTTGCGTCGGAGAAGACGATGGCGGAGAAGAACAGCTTGAAGGAAGCTACCTCCAACCTCAAGAAGAAGCTTCTCTCCAATGGCGTCAGCATCCGTTTCGGGATCTCGAAAAGCAACAGGAAGATGAAGAAGATGAAGAACAAGAAATTGGCGGCTGATTTCTCCCCCAAACCTCTGCAACCTGCTGCTTGCTACCCACATAACAAAAAGGCATGGAGCAAGCTGCTGAAAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGGATCCTGCATCTCAAATGAAACTCTATTTCTAA
BLAST of CmoCh09G006890 vs. TrEMBL
Match: A0A0A0L354_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G620590 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 1.8e-65 Identity = 140/176 (79.55%), Postives = 150/176 (85.23%), Query Frame = 1
BLAST of CmoCh09G006890 vs. TrEMBL
Match: M5X853_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024004mg PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34 Identity = 91/185 (49.19%), Postives = 126/185 (68.11%), Query Frame = 1
BLAST of CmoCh09G006890 vs. TrEMBL
Match: G7J826_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g082070 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.4e-32 Identity = 92/182 (50.55%), Postives = 116/182 (63.74%), Query Frame = 1
BLAST of CmoCh09G006890 vs. TrEMBL
Match: I3T681_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31 Identity = 90/181 (49.72%), Postives = 116/181 (64.09%), Query Frame = 1
BLAST of CmoCh09G006890 vs. TrEMBL
Match: C6SZU2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G004200 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.7e-31 Identity = 89/172 (51.74%), Postives = 112/172 (65.12%), Query Frame = 1
BLAST of CmoCh09G006890 vs. TAIR10
Match: AT4G15140.1 (AT4G15140.1 unknown protein) HSP 1 Score: 99.8 bits (247), Expect = 1.8e-21 Identity = 74/177 (41.81%), Postives = 97/177 (54.80%), Query Frame = 1
BLAST of CmoCh09G006890 vs. NCBI nr
Match: gi|449456524|ref|XP_004145999.1| (PREDICTED: uncharacterized protein LOC101221004 [Cucumis sativus]) HSP 1 Score: 256.9 bits (655), Expect = 2.5e-65 Identity = 140/176 (79.55%), Postives = 150/176 (85.23%), Query Frame = 1
BLAST of CmoCh09G006890 vs. NCBI nr
Match: gi|659129334|ref|XP_008464634.1| (PREDICTED: uncharacterized protein LOC103502470 [Cucumis melo]) HSP 1 Score: 252.7 bits (644), Expect = 4.8e-64 Identity = 138/176 (78.41%), Postives = 147/176 (83.52%), Query Frame = 1
BLAST of CmoCh09G006890 vs. NCBI nr
Match: gi|595953295|ref|XP_007216499.1| (hypothetical protein PRUPE_ppa024004mg [Prunus persica]) HSP 1 Score: 154.5 bits (389), Expect = 1.8e-34 Identity = 91/185 (49.19%), Postives = 126/185 (68.11%), Query Frame = 1
BLAST of CmoCh09G006890 vs. NCBI nr
Match: gi|645247014|ref|XP_008229631.1| (PREDICTED: uncharacterized protein LOC103328981 [Prunus mume]) HSP 1 Score: 150.6 bits (379), Expect = 2.5e-33 Identity = 93/183 (50.82%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of CmoCh09G006890 vs. NCBI nr
Match: gi|657976522|ref|XP_008380146.1| (PREDICTED: uncharacterized protein LOC103443138 [Malus domestica]) HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32 Identity = 96/187 (51.34%), Postives = 121/187 (64.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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