Csa4G620590 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G620590
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	AT4g15140/dl3615c
Location	Chr4 : 19838128 .. 19840793 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAAGAAGAAATCCCCTTCTTCAATTCACAACCAAAACAAAGAAACATTCATCCTTTTCTCACCTCATCAAACACAACTCAGAAGCAGAAGAAGCAGCAGAAGAAGTTCCCAAATGAATTTGCAATCTTGGGAAGATGATGAAGAGGAGAGATTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGATAACTCTGCCTTTGATTTCGATTACTCTCAGAGTACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACAATTCCATGGATTTGGATGTAATTACCCCTATCAAGCTTCCTTCTGATTTCGAAAACGCCCCGGTGACCGCCATGGCTGGGAAGAATAGCTTCAAGAAAGCTACCTCCAACCTTAGGAAGAAGTTCCTATATAATGGCTTCAGTGTTTGTTTTGGGATTTCGAAAAGCTACAGGAAGATGAAGAACAAGAAATTGGTGTCTGATTTCTCCCCTACGCCTATACAAGGTGGTGCTTGCTATCCTAATAACAAAAAGGTTAGTTTTGATTCTTAATCGATTCCATTCTTTTAGCTTTGGAAAGCTGCAAGATCTGTGTATTGTTATTATTCTTGCTGTTCTTCGCTGTAGTTTAACTAATACTCCATGAATGTTTAGGGGTGGAGCAAGTTACTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCCACTTCTCAAATGAAACTCTATTTCTAAAACACTCATTCATAGAATCATATCATCTACAGTGTCTTTTTTTTTTTTTTTTTTTTCTTTTTCAAATTCATTTCCACTATTATGCAAGAACAGAATATATGTAATTAACTTTATTCTCTCTGTGAATCAATGCTCATTCTTATTTTCCATGATTGGTTCCATAGATCGATAGATTCTCATGAAAAAGCAGACTCAAAACATAATATCAGATAAGATATAAGATACTAAACAGAACTAGCCAACATATCATCAATCAAATTCCCAAATGAAATGTAAGAGGAACCACCAGGAACGAGAGCTTCTCTACTTTTCTTGCTAATTTCTTCCATTCTCTTCCTCACCTCCTCTGCTTCATCGCCGTCCATCAAACGATGAACTGCTCTCTCAATCTGATCTGCAGTCACCAGGGATCCACCTTCCCTGTGGTAATCCATCGTCAACTCCACTGCTAATCCTAATTCTCTAACCATCATGAAAGCGTTCAACTGTTGCTCAGCATATTGCGGCCAAGTCACGAGCGGCACCGCATGCCAAATGCTTTCCAAAACAGAGTTCCATCCGCAGTGTGAAACGAAGCCTCCAATGGCTTTGTGGGCTAAAACATCAACTTGCCGAACCCACCCACAGACTCTTCCTTTCCCTTTAACCCTCTCCTGGAATCCCTCCGGCAAGACATCGTCGGGATCGGCATAATCCGATGGAGATTCAAATTTCTTGTGCGGCGGCGGTGGCCGGCGCAAGGACCAGAGGAACCTCACTCCGCTACTTTCGAGACCGTTTGCTATTTCCACTACTTGGGGTTGGCTGAAACTTCCCCGACTACCAAAGCACAAGAACACCACTGATGACGGTGGCTGATTATCGAGCCAAACCCTAATTTCACTGCTTTGATTTTCATTTGGTGTTGGCCTATTTTCGCTTTCCAGGTCCACCACCGGCCCCACAGGATAAATCGGAGGGATTCCGTCTTCAGATAATGAACTGAAAGCATGAGGTTCAAGCTCAGCAAAGGTATTGACGATGATTCCTTTCGCTTCCTTGAATTTCCGAGCGTGAATTGCCATGGACTCGAATCCGTAGCGGTTAAACGAATAACGAGGCAAAACCCTCACCGGAACTGGGTGAGCGTAACCAGGAATTATCATATCAGCTTCCGATTCGTCGAATTTCACACCGACACATCGATCGCGGGTTTCAAGATGAAACATCGACCCGAGAAATCCAGCACAGGAAGTGAAGAAGACATACGTATTGATGCCAAGTTCATTACCCACATCGATCATGGGAGTACAGAATAGATCAACAACCAACCCAACAACCGGAACGGCAAGGTCAACAATGGCGTTTTTAACCAGCGTCCGGTAGCTCGCGATATAGAGAGAGTAGTAATGTTCGAAGGACTTGGATAAAATTTTGGGAGAAGGAGGATCGGAGGGAGGGGGGAGATGGATGATACGAATACGCGACGTGGTCGGAGCGATGGCGGGGTTAGACGGCGGCGGATCTGAGGTTCCGTCAGTGGCCGTCGGGGTGAATGGGTATTTGAAGACGAGAATGGTGGCGGTGAATCGAGGGTCACGGTTGAGGAATTGGGTAATGAATTTGATGGTGGAGACGAGATGACCGACTCCCGAGGTGGGGACGAAAACCAGCTCCGCCGTCGCCATCTAGGGAAGAGTGAATCCGTGGTGTTCCTTCTTCTACTTCTACTTCTACTTCTACTTCTTCTTAATGAACAAACTCGATTGGTTGGTAGTATTATCTTTTTCTTAATGAACAAAGTCGATTGGTTGGTAGTATTATCTTTTCGGATTTAAATAAGTTTCCGTTAAAGTTAGATGCTTCAATCACTCTCCACCAAAGTCTCGTTTTCTCATGTACTGCCAATGAACAGGTGAAACGTCACACACTTGTA

mRNA sequence

ATGAATTTGCAATCTTGGGAAGATGATGAAGAGGAGAGATTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGATAACTCTGCCTTTGATTTCGATTACTCTCAGAGTACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACAATTCCATGGATTTGGATGTAATTACCCCTATCAAGCTTCCTTCTGATTTCGAAAACGCCCCGGTGACCGCCATGGCTGGGAAGAATAGCTTCAAGAAAGCTACCTCCAACCTTAGGAAGAAGTTCCTATATAATGGCTTCAGTGTTTGTTTTGGGATTTCGAAAAGCTACAGGAAGATGAAGAACAAGAAATTGGTGTCTGATTTCTCCCCTACGCCTATACAAGGTGGTGCTTGCTATCCTAATAACAAAAAGGGGTGGAGCAAGTTACTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCCACTTCTCAAATGAAACTCTATTTCTAA

Coding sequence (CDS)

ATGAATTTGCAATCTTGGGAAGATGATGAAGAGGAGAGATTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGATAACTCTGCCTTTGATTTCGATTACTCTCAGAGTACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACAATTCCATGGATTTGGATGTAATTACCCCTATCAAGCTTCCTTCTGATTTCGAAAACGCCCCGGTGACCGCCATGGCTGGGAAGAATAGCTTCAAGAAAGCTACCTCCAACCTTAGGAAGAAGTTCCTATATAATGGCTTCAGTGTTTGTTTTGGGATTTCGAAAAGCTACAGGAAGATGAAGAACAAGAAATTGGTGTCTGATTTCTCCCCTACGCCTATACAAGGTGGTGCTTGCTATCCTAATAACAAAAAGGGGTGGAGCAAGTTACTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCCACTTCTCAAATGAAACTCTATTTCTAA

Protein sequence

MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSMDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF*

Homology

[Close]

BLAST of Csa4G620590 vs. TrEMBL
Match: A0A0A0L354_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G620590 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 4.7e-95
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM 60
           MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM
Sbjct: 1   MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM 60

Query: 61  DLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNK 120
           DLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNK
Sbjct: 61  DLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNK 120

Query: 121 KLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 172
           KLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF
Sbjct: 121 KLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 171

[Close]

BLAST of Csa4G620590 vs. TrEMBL
Match: K7LYA3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.1e-39
Identity = 95/175 (54.29%), Postives = 115/175 (65.71%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLI----KVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRP 60
           M  Q+  + EEE L+    KVVEYL P MS ELLCKFPDNSA+DFDYSQSTIWSPL+PRP
Sbjct: 82  MESQTLYEKEEEALVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPRP 141

Query: 61  YNSMDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRK 120
           Y+ MDLD+ITP KL  D        +  K S KK  S LRKKF  + F++     K   K
Sbjct: 142 YSPMDLDLITPKKLSYDM------GLGAKCSVKKVGSKLRKKFTASAFNLNLDFIKKNSK 201

Query: 121 MKNKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFK--KKKKKDPTSQMKL 170
            KNKKL SDFSPTP + GAC P   K W++ L+AA+K FK  K K++DP + + L
Sbjct: 202 SKNKKLPSDFSPTPFK-GACNPILNKRWARALKAASKQFKKWKVKRRDPIAHVML 249

[Close]

BLAST of Csa4G620590 vs. TrEMBL
Match: A0A0B2QEX4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_045361 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.1e-39
Identity = 95/175 (54.29%), Postives = 115/175 (65.71%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLI----KVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRP 60
           M  Q+  + EEE L+    KVVEYL P MS ELLCKFPDNSA+DFDYSQSTIWSPL+PRP
Sbjct: 82  MESQTLYEKEEEALVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPRP 141

Query: 61  YNSMDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRK 120
           Y+ MDLD+ITP KL  D        +  K S KK  S LRKKF  + F++     K   K
Sbjct: 142 YSPMDLDLITPKKLSYDM------GLGAKCSVKKVGSKLRKKFTASAFNLNLDFIKKNSK 201

Query: 121 MKNKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFK--KKKKKDPTSQMKL 170
            KNKKL SDFSPTP + GAC P   K W++ L+AA+K FK  K K++DP + + L
Sbjct: 202 SKNKKLPSDFSPTPFK-GACNPILNKRWARALKAASKQFKKWKVKRRDPIAHVML 249

[Close]

BLAST of Csa4G620590 vs. TrEMBL
Match: C6SZU2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G004200 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.1e-39
Identity = 95/175 (54.29%), Postives = 115/175 (65.71%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLI----KVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRP 60
           M  Q+  + EEE L+    KVVEYL P MS ELLCKFPDNSA+DFDYSQSTIWSPL+PRP
Sbjct: 1   MESQTLYEKEEEALVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPRP 60

Query: 61  YNSMDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRK 120
           Y+ MDLD+ITP KL  D        +  K S KK  S LRKKF  + F++     K   K
Sbjct: 61  YSPMDLDLITPKKLSYDM------GLGAKCSVKKVGSKLRKKFTASAFNLNLDFIKKNSK 120

Query: 121 MKNKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFK--KKKKKDPTSQMKL 170
            KNKKL SDFSPTP + GAC P   K W++ L+AA+K FK  K K++DP + + L
Sbjct: 121 SKNKKLPSDFSPTPFK-GACNPILNKRWARALKAASKQFKKWKVKRRDPIAHVML 168

[Close]

BLAST of Csa4G620590 vs. TrEMBL
Match: A9PI78_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00980g PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.2e-38
Identity = 91/171 (53.22%), Postives = 123/171 (71.93%), Query Frame = 1


Query: 7   EDDEEERLI--KVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSMDLDV 66
           E++E  RLI  KVVEYLEP+MSKELL KFPDNSAFDFDY+QS+IWSPLVPR Y+ MDLD+
Sbjct: 13  EEEETARLISCKVVEYLEPVMSKELLFKFPDNSAFDFDYAQSSIWSPLVPRNYSPMDLDL 72

Query: 67  ITPIKLPSDFENAPVTAMAGKNSFKKATSNL--RKKFLYNGFSV---CFGISKSYRKM-K 126
           +TP K+   F +      + ++  KK +S++  +KK +    ++    F +S S  K+ K
Sbjct: 73  VTPTKIAFGFGSELDNKNSSRSGSKKLSSSIKKKKKMMMKKMAISTTAFNVSLSKLKIRK 132

Query: 127 NKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKL 170
           +K  VS+FSPT I+  +C P   KGW+K+L+AATKHFKK+KKKDPT+ +KL
Sbjct: 133 HKVKVSEFSPTSIK-TSCVPFPTKGWNKVLKAATKHFKKRKKKDPTAHVKL 182

[Close]

BLAST of Csa4G620590 vs. TAIR10
Match: AT4G15140.1 (AT4G15140.1 unknown protein)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-23
Identity = 70/177 (39.55%), Postives = 95/177 (53.67%), Query Frame = 1


Query: 1   MNLQSWEDDEEER------LIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVP 60
           +N +  +++EEE+        KVVEYL+P+M +ELLCKFPDNSAF FDYSQS++WSPL+P
Sbjct: 2   VNQRKLQEEEEEKENYPLITTKVVEYLQPVMCRELLCKFPDNSAFGFDYSQSSLWSPLLP 61

Query: 61  RPYNSMDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKS- 120
           R Y S           PSD ++          + K     + KK      S+     KS 
Sbjct: 62  RNYAS-----------PSDLDSDSCVC----RNLKLGEFQVGKKKKMKMMSMKKNKKKSK 121

Query: 121 YRKMKNKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKK-KKKKDPTSQMKL 170
             K+    + +D S   I    C+P   KGW+ +L+AA+KHFKK KKK+D  +  KL
Sbjct: 122 LLKLDIPSMKNDDSSPKI---GCFPLPTKGWNGVLKAASKHFKKSKKKRDSFADAKL 160

[Close]

BLAST of Csa4G620590 vs. NCBI nr
Match: gi|449456524|ref|XP_004145999.1| (PREDICTED: uncharacterized protein LOC101221004 [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 6.7e-95
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM 60
           MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM
Sbjct: 1   MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM 60

Query: 61  DLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNK 120
           DLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNK
Sbjct: 61  DLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNK 120

Query: 121 KLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 172
           KLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF
Sbjct: 121 KLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 171

[Close]

BLAST of Csa4G620590 vs. NCBI nr
Match: gi|659129334|ref|XP_008464634.1| (PREDICTED: uncharacterized protein LOC103502470 [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 153/171 (89.47%), Postives = 157/171 (91.81%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM 60
           MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM
Sbjct: 1   MNLQSWEDDEEERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSM 60

Query: 61  DLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMKNK 120
           DLDVITPIKLPSDF     T MA KNSFKKATSNL+KK L N F + FGISKSYRKMKN 
Sbjct: 61  DLDVITPIKLPSDF-----TRMAEKNSFKKATSNLKKKLLSNRFGIGFGISKSYRKMKNN 120

Query: 121 KLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 172
           KLVSDFSP+PI+GGACYPNNKKGWSKLLRAATKHFKKKKKKDPTS MKLYF
Sbjct: 121 KLVSDFSPSPIRGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSHMKLYF 166

[Close]

BLAST of Csa4G620590 vs. NCBI nr
Match: gi|351723931|ref|NP_001236528.1| (uncharacterized protein LOC100306545 [Glycine max])

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38
Identity = 95/175 (54.29%), Postives = 115/175 (65.71%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLI----KVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRP 60
           M  Q+  + EEE L+    KVVEYL P MS ELLCKFPDNSA+DFDYSQSTIWSPL+PRP
Sbjct: 1   MESQTLYEKEEEALVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPRP 60

Query: 61  YNSMDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRK 120
           Y+ MDLD+ITP KL  D        +  K S KK  S LRKKF  + F++     K   K
Sbjct: 61  YSPMDLDLITPKKLSYDM------GLGAKCSVKKVGSKLRKKFTASAFNLNLDFIKKNSK 120

Query: 121 MKNKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFK--KKKKKDPTSQMKL 170
            KNKKL SDFSPTP + GAC P   K W++ L+AA+K FK  K K++DP + + L
Sbjct: 121 SKNKKLPSDFSPTPFK-GACNPILNKRWARALKAASKQFKKWKVKRRDPIAHVML 168

[Close]

BLAST of Csa4G620590 vs. NCBI nr
Match: gi|734372363|gb|KHN19825.1| (hypothetical protein glysoja_045361 [Glycine soja])

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38
Identity = 95/175 (54.29%), Postives = 115/175 (65.71%), Query Frame = 1


Query: 1   MNLQSWEDDEEERLI----KVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRP 60
           M  Q+  + EEE L+    KVVEYL P MS ELLCKFPDNSA+DFDYSQSTIWSPL+PRP
Sbjct: 82  MESQTLYEKEEEALVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPRP 141

Query: 61  YNSMDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRK 120
           Y+ MDLD+ITP KL  D        +  K S KK  S LRKKF  + F++     K   K
Sbjct: 142 YSPMDLDLITPKKLSYDM------GLGAKCSVKKVGSKLRKKFTASAFNLNLDFIKKNSK 201

Query: 121 MKNKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFK--KKKKKDPTSQMKL 170
            KNKKL SDFSPTP + GAC P   K W++ L+AA+K FK  K K++DP + + L
Sbjct: 202 SKNKKLPSDFSPTPFK-GACNPILNKRWARALKAASKQFKKWKVKRRDPIAHVML 249

[Close]

BLAST of Csa4G620590 vs. NCBI nr
Match: gi|224089603|ref|XP_002308774.1| (hypothetical protein POPTR_0006s00980g [Populus trichocarpa])

HSP 1 Score: 165.6 bits (418), Expect = 7.5e-38
Identity = 91/171 (53.22%), Postives = 123/171 (71.93%), Query Frame = 1


Query: 7   EDDEEERLI--KVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSMDLDV 66
           E++E  RLI  KVVEYLEP+MSKELL KFPDNSAFDFDY+QS+IWSPLVPR Y+ MDLD+
Sbjct: 13  EEEETARLISCKVVEYLEPVMSKELLFKFPDNSAFDFDYAQSSIWSPLVPRNYSPMDLDL 72

Query: 67  ITPIKLPSDFENAPVTAMAGKNSFKKATSNL--RKKFLYNGFSV---CFGISKSYRKM-K 126
           +TP K+   F +      + ++  KK +S++  +KK +    ++    F +S S  K+ K
Sbjct: 73  VTPTKIAFGFGSELDNKNSSRSGSKKLSSSIKKKKKMMMKKMAISTTAFNVSLSKLKIRK 132

Query: 127 NKKLVSDFSPTPIQGGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKL 170
           +K  VS+FSPT I+  +C P   KGW+K+L+AATKHFKK+KKKDPT+ +KL
Sbjct: 133 HKVKVSEFSPTSIK-TSCVPFPTKGWNKVLKAATKHFKKRKKKDPTAHVKL 182

The following BLAST results are available for this feature:

BLAST of Csa4G620590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L354_CUCSA	4.7e-95	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G620590 PE=4 SV=1	[more]
K7LYA3_SOYBN	8.1e-39	54.29	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0B2QEX4_GLYSO	8.1e-39	54.29	Uncharacterized protein OS=Glycine soja GN=glysoja_045361 PE=4 SV=1	[more]
C6SZU2_SOYBN	8.1e-39	54.29	Uncharacterized protein OS=Glycine max GN=GLYMA_13G004200 PE=2 SV=1	[more]
A9PI78_POPTR	5.2e-38	53.22	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00980g PE=2 SV=1	[more]

BLAST of Csa4G620590 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15140.1	3.3e-23	39.55	unknown protein	[more]

BLAST of Csa4G620590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456524\|ref\|XP_004145999.1\|	6.7e-95	100.00	PREDICTED: uncharacterized protein LOC101221004 [Cucumis sativus]	[more]
gi\|659129334\|ref\|XP_008464634.1\|	1.9e-81	89.47	PREDICTED: uncharacterized protein LOC103502470 [Cucumis melo]	[more]
gi\|351723931\|ref\|NP_001236528.1\|	1.2e-38	54.29	uncharacterized protein LOC100306545 [Glycine max]	[more]
gi\|734372363\|gb\|KHN19825.1\|	1.2e-38	54.29	hypothetical protein glysoja_045361 [Glycine soja]	[more]
gi\|224089603\|ref\|XP_002308774.1\|	7.5e-38	53.22	hypothetical protein POPTR_0006s00980g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU101259	cucumber EST collection version 3.0	transcribed_cluster
CU109793	cucumber EST collection version 3.0	transcribed_cluster
CU147252	cucumber EST collection version 3.0	transcribed_cluster
CU167050	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G620590.1	Csa4G620590.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU147252	CU147252	transcribed_cluster
CU101259	CU101259	transcribed_cluster
CU167050	CU167050	transcribed_cluster
CU109793	CU109793	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34287	FAMILY NOT NAMED	coord: 15..169 score: 7.6
None	No IPR available	PANTHER	PTHR34287:SF4	SUBFAMILY NOT NAMED	coord: 15..169 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G620590	Cla023280	Watermelon (97103) v1	cuwmB349
Csa4G620590	ClCG11G016910	Watermelon (Charleston Gray)	cuwcgB279
Csa4G620590	Lsi04G019430	Bottle gourd (USVL1VR-Ls)	culsiB283
Csa4G620590	Cla97C11G222900	Watermelon (97103) v2	cuwmbB279
Csa4G620590	CSPI04G22170	Wild cucumber (PI 183967)	cpicuB181
Csa4G620590	Cucsa.058300	Cucumber (Gy14) v1	cgycuB043
Csa4G620590	CmaCh09G007000	Cucurbita maxima (Rimu)	cmacuB025
Csa4G620590	CmoCh09G006890	Cucurbita moschata (Rifu)	cmocuB016
Csa4G620590	Cp4.1LG06g05530	Cucurbita pepo (Zucchini)	cpecuB786
Csa4G620590	CsGy4G020690	Cucumber (Gy14) v2	cgybcuB166
Csa4G620590	Carg03097	Silver-seed gourd	carcuB0657

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G620590	Cucurbita pepo (Zucchini)	cpecuB565
Csa4G620590	Bottle gourd (USVL1VR-Ls)	culsiB290
Csa4G620590	Melon (DHL92) v3.6.1	cumedB304
Csa4G620590	Silver-seed gourd	carcuB0339
Csa4G620590	Wax gourd	cuwgoB419
Csa4G620590	Cucumber (Gy14) v1	cgycuB042
Csa4G620590	Cucurbita maxima (Rimu)	cmacuB474
Csa4G620590	Cucurbita moschata (Rifu)	cmocuB462
Csa4G620590	Melon (DHL92) v3.5.1	cumeB273