CmoCh08G001530 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G001530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor 1
LocationCmo_Chr08 : 893386 .. 893970 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACACAAACTCCCACCATTCTCAACCCACCACCACCTCCTCCGCCTCTTCTTCCGCCTCTTCCTCCGGCGAGAACGGCCGAAAGAGGCCGAGGGGTACGACGATGAGCAACATAGAGAGCGAGAGCGAATCGAGCCACTCAACGAGGAAGTACAGAGGGGTTCGTCGGAGAGCGTGGGGAAAATGGGTGTCCGAAATAAGGGAGCCAAGGAAGAAATCAAGGATATGGCTCGGTACATACTCGACCGCGGAGATGGCGGCACGAGCACACGACGCGGCGGCTCTTGCCATCAAAGGCTGTGGTGCATTCCTCAACTTCCCTGAACTCAAACACCAACTCCCCCGCCCTGCCTCCCTCTCCGCCAAGGACATCCAGGCCGCCGCCGCAGACGCAGCCACCCTCAAACCACCAATGGCGGAGGAGGAGGAGGAGGAGGAAGAGACGTGGTTTGATTTGCCGGATCTTGTGGTCGGAGGGAGTGATGGGCTGCTGCTGGCCGGCTATGATTCGCCGTGGCAGTTCGGTGGAGATCAACAACATTCATGGCATTGGGACTCTTATTCTCATACTATTCTTCCTTGA

mRNA sequence

ATGAACACAAACTCCCACCATTCTCAACCCACCACCACCTCCTCCGCCTCTTCTTCCGCCTCTTCCTCCGGCGAGAACGGCCGAAAGAGGCCGAGGGGTACGACGATGAGCAACATAGAGAGCGAGAGCGAATCGAGCCACTCAACGAGGAAGTACAGAGGGGTTCGTCGGAGAGCGTGGGGAAAATGGGTGTCCGAAATAAGGGAGCCAAGGAAGAAATCAAGGATATGGCTCGGTACATACTCGACCGCGGAGATGGCGGCACGAGCACACGACGCGGCGGCTCTTGCCATCAAAGGCTGTGGTGCATTCCTCAACTTCCCTGAACTCAAACACCAACTCCCCCGCCCTGCCTCCCTCTCCGCCAAGGACATCCAGGCCGCCGCCGCAGACGCAGCCACCCTCAAACCACCAATGGCGGAGGAGGAGGAGGAGGAGGAAGAGACGTGGTTTGATTTGCCGGATCTTGTGGTCGGAGGGAGTGATGGGCTGCTGCTGGCCGGCTATGATTCGCCGTGGCAGTTCGGTGGAGATCAACAACATTCATGGCATTGGGACTCTTATTCTCATACTATTCTTCCTTGA

Coding sequence (CDS)

ATGAACACAAACTCCCACCATTCTCAACCCACCACCACCTCCTCCGCCTCTTCTTCCGCCTCTTCCTCCGGCGAGAACGGCCGAAAGAGGCCGAGGGGTACGACGATGAGCAACATAGAGAGCGAGAGCGAATCGAGCCACTCAACGAGGAAGTACAGAGGGGTTCGTCGGAGAGCGTGGGGAAAATGGGTGTCCGAAATAAGGGAGCCAAGGAAGAAATCAAGGATATGGCTCGGTACATACTCGACCGCGGAGATGGCGGCACGAGCACACGACGCGGCGGCTCTTGCCATCAAAGGCTGTGGTGCATTCCTCAACTTCCCTGAACTCAAACACCAACTCCCCCGCCCTGCCTCCCTCTCCGCCAAGGACATCCAGGCCGCCGCCGCAGACGCAGCCACCCTCAAACCACCAATGGCGGAGGAGGAGGAGGAGGAGGAAGAGACGTGGTTTGATTTGCCGGATCTTGTGGTCGGAGGGAGTGATGGGCTGCTGCTGGCCGGCTATGATTCGCCGTGGCAGTTCGGTGGAGATCAACAACATTCATGGCATTGGGACTCTTATTCTCATACTATTCTTCCTTGA
Homology
[Close]
BLAST of CmoCh08G001530 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-29
Identity = 66/84 (78.57%), Postives = 70/84 (83.33%), Query Frame = 1 

Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           YRGVR R WGKWVSEIREPRKKSRIWLGT+ST EMAARAHDAAAL IKG  A LNFPEL 
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 112 HQLPRPASLSAKDIQAAAADAATL 136
             LPRPAS S +D+QAAAA AA +
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAAM 126

[Close]
BLAST of CmoCh08G001530 vs. Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-29
Identity = 66/82 (80.49%), Postives = 70/82 (85.37%), Query Frame = 1 

Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           +RGVR R WGKWVSEIREP+KKSRIWLGT+STAEMAARAHD AALAIKG  A LNFPEL 
Sbjct: 45  FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELA 104

Query: 112 HQLPRPASLSAKDIQAAAADAA 134
           + LPRPAS   KDIQAAAA AA
Sbjct: 105 YHLPRPASADPKDIQAAAAAAA 126

[Close]
BLAST of CmoCh08G001530 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-29
Identity = 67/101 (66.34%), Postives = 77/101 (76.24%), Query Frame = 1 

Query: 35  TMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAA 94
           T  + + + E +     YRG R R+WGKWVSEIREPRKKSRIWLGT+ TAEMAARAHD A
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 95  ALAIKGCGAFLNFPELKHQLPRPASLSAKDIQAAAADAATL 136
           AL+IKG  A LNFPEL   LPRP SLS +DIQAAAA+AA +
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of CmoCh08G001530 vs. Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.4e-29
Identity = 80/147 (54.42%), Postives = 95/147 (64.63%), Query Frame = 1 

Query: 11  TTTSSASSSASSSGENGRKRPRGTTMSNIE-------SESESSHSTRKYRGVRRRAWGKW 70
           T T S+SS  +SS ++     R     N         + S+ + +   YRGVR R+WGKW
Sbjct: 23  TATISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKW 82

Query: 71  VSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASLSAK 130
           VSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG   FLNFPEL   LPRP S S K
Sbjct: 83  VSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPK 142

Query: 131 DIQAA---AADAATLKPPMAEEEEEEE 148
           DIQAA   AA+A T   P+ +++  +E
Sbjct: 143 DIQAAATKAAEATTWHKPVIDKKLADE 169

[Close]
BLAST of CmoCh08G001530 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 9.4e-29
Identity = 84/174 (48.28%), Postives = 99/174 (56.90%), Query Frame = 1 

Query: 11  TTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREP 70
           TTTS+  S   +   N   R R    S+  S S   H    YRGVR R+WGKWVSEIR+P
Sbjct: 22  TTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPV--YRGVRMRSWGKWVSEIRQP 81

Query: 71  RKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASLSAKDIQAAAA 130
           RKK+RIWLGT+ TA+MAARAHD AAL IKG  A LNFPEL    PRPAS S  DIQ AAA
Sbjct: 82  RKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAA 141

Query: 131 DAATL--------------KPPMAE--------EEEEEEETWFDLPDLVVGGSD 163
           +AA +               PP +E        E+EE  E   +LP++  G  D
Sbjct: 142 EAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYD 193

[Close]
BLAST of CmoCh08G001530 vs. TrEMBL
Match: A0A0A0KAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 8.0e-51
Identity = 134/220 (60.91%), Postives = 146/220 (66.36%), Query Frame = 1 

Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           M TNSHHS  TT+SSA S  +++    RKR R +T S  ESES+   ST K+RGVR RAW
Sbjct: 1   MTTNSHHS--TTSSSAVSCLTATS---RKRQRSSTSSATESESDQESSTPKFRGVRLRAW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFP+LKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLKPPMAE---------EEEEEEETWFDLPDLVVGGSDGLLL----- 180
           SAKDIQAAAA AA LK              EEEEEE TWFDLPDL+V  S+G LL     
Sbjct: 121 SAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV--SNGFLLGLDEN 180

Query: 181 --------AGYDSPWQF----GGDQQHSWHWDSYSHTILP 195
                   +   S WQF      D    WH D +SHTI P
Sbjct: 181 YSSSCSSSSSSSSSWQFLVDDHEDNHFQWHSD-FSHTIFP 212

[Close]
BLAST of CmoCh08G001530 vs. TrEMBL
Match: A0A067JY82_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14613 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.3e-32
Identity = 95/196 (48.47%), Postives = 120/196 (61.22%), Query Frame = 1 

Query: 2   NTNSHHSQPTTTSSASSSASSSG---------ENG----RKRPRGTTMSNIESESESSHS 61
           +++S  S  +++SS+SSSAS+ G         ENG    +K+   T+ ++    + +++ 
Sbjct: 19  SSSSSSSPSSSSSSSSSSASNKGSRKAYFQELENGNESKKKQKMSTSSADHNETNRNNNK 78

Query: 62  TRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFP 121
             KYRGVR R+WGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  A+LNFP
Sbjct: 79  HPKYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSAYLNFP 138

Query: 122 ELKHQLPRPASLSAKDIQAAAADAA----------------------TLKPPMAEEEEEE 163
           EL H+LPRP + S KDIQAAAA AA                      T         +E 
Sbjct: 139 ELVHELPRPVTKSPKDIQAAAAKAALSETTQFQLQAEAHQLISSNTNTTSAMDNSNTQES 198

[Close]
BLAST of CmoCh08G001530 vs. TrEMBL
Match: B9T7D9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0236090 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31
Identity = 93/175 (53.14%), Postives = 112/175 (64.00%), Query Frame = 1 

Query: 8   SQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRK---------------- 67
           +Q TT+SS+  S++SS E+    P  T +++ ++ES   H   K                
Sbjct: 11  AQTTTSSSSFYSSTSSTESSIPSP--TKINSTKNESRKRHQELKKDNNERKKKVNVSTVN 70

Query: 68  ------YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFL 127
                 YRGVR R WGKWVSEIREPRKKSRIWLGTY TAEMAARAHDAAALAIKG  A L
Sbjct: 71  AGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDAAALAIKGNSAHL 130

Query: 128 NFPELKHQLPRPASLSAKDIQAAAADAATLKPPMAEEEE---EEEETWFDLPDLV 158
           NFP+L H+LPRPAS S KDIQAAAA AA L+     E     +E++ + DLPDL+
Sbjct: 131 NFPDLAHELPRPASASPKDIQAAAALAAALECKEGHESSLLTDEDDMFIDLPDLL 183

[Close]
BLAST of CmoCh08G001530 vs. TrEMBL
Match: A0A0D3FYN2_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-31
Identity = 85/154 (55.19%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 11  TTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREP 70
           ++ SS  S ++  G  G+KRPR   +          H T  YRGVR R+WGKWVSEIREP
Sbjct: 34  SSPSSVDSGSAGGGGGGKKRPRSDHLK---------HPT--YRGVRMRSWGKWVSEIREP 93

Query: 71  RKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASLSAKDIQA--- 130
           RKKSRIWLGT+ TAEMAARAHD AALAIKG  A LNFP+L H LPR AS S KD+QA   
Sbjct: 94  RKKSRIWLGTFDTAEMAARAHDVAALAIKGRTAHLNFPDLAHLLPRAASASPKDVQAKSP 153

Query: 131 ---AAADAATLKPPMAEEEEEEEETWFDLPDLVV 159
              + A AA+ +PP  + E + + T FDLPDL++
Sbjct: 154 DTCSVASAASPQPPPPDAEADPDSTLFDLPDLLL 176

[Close]
BLAST of CmoCh08G001530 vs. TrEMBL
Match: S8E1X8_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05091 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-31
Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = 1 

Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           YRGVR+R+WGKWV EIREP+KKSRIWLGTY TAEMAARAHD AALAIKG  A LNFP L 
Sbjct: 2   YRGVRKRSWGKWVCEIREPKKKSRIWLGTYETAEMAARAHDVAALAIKGRSAHLNFPALA 61

Query: 112 HQLPRPASLSAKDIQAAAADAATLKPPMAEEEEEEEETWFDLPDL 157
            +LPRPAS S +DIQAAAA AA +    +    E+++ +FDLPDL
Sbjct: 62  EELPRPASTSRRDIQAAAAKAAFIGSESSGSGREDDDAFFDLPDL 106

[Close]
BLAST of CmoCh08G001530 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 8.2e-31
Identity = 66/84 (78.57%), Postives = 70/84 (83.33%), Query Frame = 1 

Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           YRGVR R WGKWVSEIREPRKKSRIWLGT+ST EMAARAHDAAAL IKG  A LNFPEL 
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 112 HQLPRPASLSAKDIQAAAADAATL 136
             LPRPAS S +D+QAAAA AA +
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAAM 126

[Close]
BLAST of CmoCh08G001530 vs. TAIR10
Match: AT2G35700.1 (AT2G35700.1 ERF family protein 38)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 66/82 (80.49%), Postives = 70/82 (85.37%), Query Frame = 1 

Query: 52  YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELK 111
           +RGVR R WGKWVSEIREP+KKSRIWLGT+STAEMAARAHD AALAIKG  A LNFPEL 
Sbjct: 45  FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELA 104

Query: 112 HQLPRPASLSAKDIQAAAADAA 134
           + LPRPAS   KDIQAAAA AA
Sbjct: 105 YHLPRPASADPKDIQAAAAAAA 126

[Close]
BLAST of CmoCh08G001530 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 67/101 (66.34%), Postives = 77/101 (76.24%), Query Frame = 1 

Query: 35  TMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAA 94
           T  + + + E +     YRG R R+WGKWVSEIREPRKKSRIWLGT+ TAEMAARAHD A
Sbjct: 9   TECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVA 68

Query: 95  ALAIKGCGAFLNFPELKHQLPRPASLSAKDIQAAAADAATL 136
           AL+IKG  A LNFPEL   LPRP SLS +DIQAAAA+AA +
Sbjct: 69  ALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of CmoCh08G001530 vs. TAIR10
Match: AT2G44940.1 (AT2G44940.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-30
Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 1 

Query: 8   SQPTTTSSASSSASSS---GENGRKRPRGTTMSNIESESESSHST------RK------- 67
           S PTT+SS+SSS +S+    +N +++    ++S++ S  +           RK       
Sbjct: 38  SSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKH 97

Query: 68  --YRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPE 127
             YRGVR R+WGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  A+LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 128 LKHQLPRPASLSAKDIQAAAADAA 134
           L  +LPRP + S KDIQAAA+ AA
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAA 181

[Close]
BLAST of CmoCh08G001530 vs. TAIR10
Match: AT3G16280.1 (AT3G16280.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-30
Identity = 84/174 (48.28%), Postives = 99/174 (56.90%), Query Frame = 1 

Query: 11  TTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAWGKWVSEIREP 70
           TTTS+  S   +   N   R R    S+  S S   H    YRGVR R+WGKWVSEIR+P
Sbjct: 22  TTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPV--YRGVRMRSWGKWVSEIRQP 81

Query: 71  RKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASLSAKDIQAAAA 130
           RKK+RIWLGT+ TA+MAARAHD AAL IKG  A LNFPEL    PRPAS S  DIQ AAA
Sbjct: 82  RKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAA 141

Query: 131 DAATL--------------KPPMAE--------EEEEEEETWFDLPDLVVGGSD 163
           +AA +               PP +E        E+EE  E   +LP++  G  D
Sbjct: 142 EAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYD 193

[Close]
BLAST of CmoCh08G001530 vs. NCBI nr
Match: gi|449445736|ref|XP_004140628.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 134/220 (60.91%), Postives = 146/220 (66.36%), Query Frame = 1 

Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           M TNSHHS  TT+SSA S  +++    RKR R +T S  ESES+   ST K+RGVR RAW
Sbjct: 1   MTTNSHHS--TTSSSAVSCLTATS---RKRQRSSTSSATESESDQESSTPKFRGVRLRAW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFP+LKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLKPPMAE---------EEEEEEETWFDLPDLVVGGSDGLLL----- 180
           SAKDIQAAAA AA LK              EEEEEE TWFDLPDL+V  S+G LL     
Sbjct: 121 SAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV--SNGFLLGLDEN 180

Query: 181 --------AGYDSPWQF----GGDQQHSWHWDSYSHTILP 195
                   +   S WQF      D    WH D +SHTI P
Sbjct: 181 YSSSCSSSSSSSSSWQFLVDDHEDNHFQWHSD-FSHTIFP 212

[Close]
BLAST of CmoCh08G001530 vs. NCBI nr
Match: gi|659120426|ref|XP_008460188.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo])

HSP 1 Score: 205.3 bits (521), Expect = 9.7e-50
Identity = 132/214 (61.68%), Postives = 144/214 (67.29%), Query Frame = 1 

Query: 1   MNTNSHHSQPTTTSSASSSASSSGENGRKRPRGTTMSNIESESESSHSTRKYRGVRRRAW 60
           M TNSHHS  TT+SSA++S        RKR R +T S  ESES+   ST K+RGVR R W
Sbjct: 1   MTTNSHHS--TTSSSATTS--------RKRQRSSTSSATESESDQEISTPKFRGVRLRTW 60

Query: 61  GKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPASL 120
           GKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  AFLNFP+LKHQLPRPASL
Sbjct: 61  GKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASL 120

Query: 121 SAKDIQAAAADAATLK--PPMAE--EEEEEEETWFDLPDLVVGGSDGLLL---------- 180
           SAKDIQAAAA AA LK  P  A     EEEE TWFDLPDL+V  S+G LL          
Sbjct: 121 SAKDIQAAAAQAAALKHEPETATSCRGEEEESTWFDLPDLIV--SNGFLLGLDENYSSSC 180

Query: 181 --AGYDSPWQF----GGDQQHSWHWDSYSHTILP 195
             +   + WQF      D    WH D +SHTI P
Sbjct: 181 SSSSSSTSWQFLVDDHEDNHFQWHSD-FSHTIFP 201

[Close]
BLAST of CmoCh08G001530 vs. NCBI nr
Match: gi|951005531|ref|XP_014508177.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Vigna radiata var. radiata])

HSP 1 Score: 146.7 bits (369), Expect = 4.1e-32
Identity = 101/215 (46.98%), Postives = 126/215 (58.60%), Query Frame = 1 

Query: 3   TNSHHSQPTTTSSASSSASSSGENGRKRPRGT----TMSNIESESESSHSTRKYRGVRRR 62
           ++S  S  T+TSS+SSS+SSS    +++P  T    T     + +  +H T  YRGVR R
Sbjct: 18  SSSSFSITTSTSSSSSSSSSSSSVDQQQPTNTKDKKTKKTNVNTNHGNHPT--YRGVRMR 77

Query: 63  AWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFPELKHQLPRPA 122
            WGKWVSEIREPRKKSRIWLGT+ T +MAARAHD AAL IKG  AFLNFPEL  +LPRP 
Sbjct: 78  QWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAFLNFPELAAELPRPT 137

Query: 123 SLSAKDIQAAAADAATL--KPPMAEEEEE------------------EEETWFDLPDLVV 182
           + S KDIQ AAA AA L  +P   E E E                  E++T+ DLPDL +
Sbjct: 138 TNSPKDIQVAAAKAAALDFRPRSHEAESELSRGGSISNSSSNSSLKSEDDTFMDLPDLSL 197

Query: 183 GGSDGLLLAGYDSPWQFGGDQ-----QHSWHWDSY 189
             S G+    Y S W   G +     +  + W+SY
Sbjct: 198 DLSHGVDEFHYSSAWLVAGSELGFRLEEPFLWESY 230

[Close]
BLAST of CmoCh08G001530 vs. NCBI nr
Match: gi|802700333|ref|XP_012083682.1| (PREDICTED: ethylene-responsive transcription factor ERF034 [Jatropha curcas])

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 95/196 (48.47%), Postives = 120/196 (61.22%), Query Frame = 1 

Query: 2   NTNSHHSQPTTTSSASSSASSSG---------ENG----RKRPRGTTMSNIESESESSHS 61
           +++S  S  +++SS+SSSAS+ G         ENG    +K+   T+ ++    + +++ 
Sbjct: 19  SSSSSSSPSSSSSSSSSSASNKGSRKAYFQELENGNESKKKQKMSTSSADHNETNRNNNK 78

Query: 62  TRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALAIKGCGAFLNFP 121
             KYRGVR R+WGKWVSEIREPRKKSRIWLGTY TAEMAARAHD AALAIKG  A+LNFP
Sbjct: 79  HPKYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSAYLNFP 138

Query: 122 ELKHQLPRPASLSAKDIQAAAADAA----------------------TLKPPMAEEEEEE 163
           EL H+LPRP + S KDIQAAAA AA                      T         +E 
Sbjct: 139 ELVHELPRPVTKSPKDIQAAAAKAALSETTQFQLQAEAHQLISSNTNTTSAMDNSNTQES 198

[Close]
BLAST of CmoCh08G001530 vs. NCBI nr
Match: gi|970057373|ref|XP_015055334.1| (PREDICTED: ethylene-responsive transcription factor ERF034-like [Solanum pennellii])

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 84/153 (54.90%), Postives = 98/153 (64.05%), Query Frame = 1 

Query: 38  NIESESESSHSTRKYRGVRRRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDAAALA 97
           +I+ + +  H T  YRGVR+R WGKWVSEIREPRKKSRIWLGTYSTAEMAARAHD AALA
Sbjct: 51  DIQVDHDDKHPT--YRGVRKRNWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDVAALA 110

Query: 98  IKGCGAFLNFPELKHQLPRPASLSAKDIQAAAADAATLK------PPMAEEEEEEEETWF 157
           IKG  A+LNFP L  QLPRP S S KDIQ AAA AA  K        +     ++++T+ 
Sbjct: 111 IKGHSAYLNFPYLTDQLPRPTSTSPKDIQIAAAKAAATKFSRNVAESITSPSTDKDDTFL 170

Query: 158 DLPDLVVGGSDGLLLAGYD-SPWQFGGDQQHSW 184
           DLPDL +   D +    Y  S W   G     W
Sbjct: 171 DLPDLSINKVDQIDSYCYPISTWHLVGADVGFW 201

The following BLAST results are available for this feature:
BLAST of CmoCh08G001530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF37_ARATH1.5e-2978.57Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF38_ARATH1.9e-2980.49Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF42_ARATH3.2e-2966.34Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04... [more]
ERF35_ARATH9.4e-2954.42Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF36_ARATH9.4e-2948.28Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03... [more]
BLAST of CmoCh08G001530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAN0_CUCSA8.0e-5160.91Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104640 PE=4 SV=1[more]
A0A067JY82_JATCU8.3e-3248.47Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14613 PE=4 SV=1[more]
B9T7D9_RICCO1.4e-3153.14DNA binding protein, putative OS=Ricinus communis GN=RCOM_0236090 PE=4 SV=1[more]
A0A0D3FYN2_9ORYZ1.8e-3155.19Uncharacterized protein OS=Oryza barthii PE=4 SV=1[more]
S8E1X8_9LAMI3.1e-3168.57Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05091 PE=4 SV=1[more]
BLAST of CmoCh08G001530 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G77200.18.2e-3178.57 Integrase-type DNA-binding superfamily protein[more]
AT2G35700.11.1e-3080.49 ERF family protein 38[more]
AT2G25820.11.8e-3066.34 Integrase-type DNA-binding superfamily protein[more]
AT2G44940.15.3e-3055.56 Integrase-type DNA-binding superfamily protein[more]
AT3G16280.15.3e-3048.28 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh08G001530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445736|ref|XP_004140628.1|1.1e-5060.91PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus... [more]
gi|659120426|ref|XP_008460188.1|9.7e-5061.68PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo][more]
gi|951005531|ref|XP_014508177.1|4.1e-3246.98PREDICTED: ethylene-responsive transcription factor ERF039-like [Vigna radiata v... [more]
gi|802700333|ref|XP_012083682.1|1.2e-3148.47PREDICTED: ethylene-responsive transcription factor ERF034 [Jatropha curcas][more]
gi|970057373|ref|XP_015055334.1|1.6e-3154.90PREDICTED: ethylene-responsive transcription factor ERF034-like [Solanum pennell... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G001530.1CmoCh08G001530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 52..63
score: 8.9E-11coord: 74..90
score: 8.9
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 50..109
score: 3.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 51..100
score: 3.3
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 51..114
score: 6.2
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 51..108
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 51..108
score: 3.07
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 33..164
score: 9.1
NoneNo IPR availablePANTHERPTHR31985:SF3ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF019-RELATEDcoord: 33..164
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G001530CmaCh08G001540Cucurbita maxima (Rimu)cmacmoB913
CmoCh08G001530Csa6G104640Cucumber (Chinese Long) v2cmocuB897
CmoCh08G001530CSPI06G08270Wild cucumber (PI 183967)cmocpiB911
CmoCh08G001530CsaV3_6G008650Cucumber (Chinese Long) v3cmocucB1065
CmoCh08G001530Carg04979Silver-seed gourdcarcmoB0119
CmoCh08G001530Carg26728Silver-seed gourdcarcmoB0189
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G001530CmoCh17G004950Cucurbita moschata (Rifu)cmocmoB323
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G001530Wild cucumber (PI 183967)cmocpiB895
CmoCh08G001530Cucumber (Chinese Long) v2cmocuB882
CmoCh08G001530Melon (DHL92) v3.5.1cmomeB803
CmoCh08G001530Watermelon (Charleston Gray)cmowcgB802
CmoCh08G001530Watermelon (97103) v1cmowmB864
CmoCh08G001530Cucurbita pepo (Zucchini)cmocpeB836
CmoCh08G001530Cucurbita pepo (Zucchini)cmocpeB851
CmoCh08G001530Bottle gourd (USVL1VR-Ls)cmolsiB800
CmoCh08G001530Cucumber (Gy14) v2cgybcmoB430
CmoCh08G001530Cucumber (Gy14) v2cgybcmoB848
CmoCh08G001530Melon (DHL92) v3.6.1cmomedB906
CmoCh08G001530Cucumber (Chinese Long) v3cmocucB1043
CmoCh08G001530Cucumber (Chinese Long) v3cmocucB1049
CmoCh08G001530Watermelon (97103) v2cmowmbB899
CmoCh08G001530Wax gourdcmowgoB1088
CmoCh08G001530Wax gourdcmowgoB1098
CmoCh08G001530Cucurbita moschata (Rifu)cmocmoB313
CmoCh08G001530Cucumber (Gy14) v1cgycmoB0311
CmoCh08G001530Cucurbita maxima (Rimu)cmacmoB368