CsaV3_6G008650 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G008650
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionethylene-responsive transcription factor ERF039-like
Locationchr6 : 6942444 .. 6944085 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCACCGAAATATTCTTGATTATATTATGACAAGTAGTACCACATGGGATACAAATAACCTAGCTAGGGCTGCTGAACTGTAATCTACCTCTTATATCATATATACCCCACCATACCCCTTCTCTAAGAAAACAGCAAATTAAAATATTCCACGTCATATTTACCCAATTAATATAAAAACTAAAATCAAAATTAAAGATTAAAAATAAAAAATAAAAGCATAAAAGGCCTACACAACAACAACACACACTGTCTCTTCTCTTCTCTTCAATTCCTAAACACAACAAACCAAAAAAAAAAAAAAAAATGACTACAAACTCCCACCATTCCACCACCAGTTCCTCCGCCGTCTCCTGCCTCACAGCAACCAGCCGGAAAAGGCAAAGGAGTAGCACGAGTTCTGCCACGGAAAGCGAATCGGATCAAGAATCAAGTACCCCTAAATTCAGAGGGGTAAGGCTAAGAGCATGGGGAAAATGGGTGTCGGAAATCCGAGAACCGAGAAAGAAATCAAGAATATGGCTTGGCACTTATCCGACTGCAGAGATGGCGGCGCGTGCTCATGATGTAGCCGCACTCGCCATCAAAGGCCACCGTGCTTTCCTCAACTTCCCTCAACTCAAACACCAACTCCCTCGCCCTGCCTCCCTCTCCGCCAAAGATATTCAAGCCGCGGCCGCACAAGCCGCTGCGCTCAAACACGAACCCGAAACGCCCACATCGTGTCTAGAAGAAGGACTTGAAGAAGAAGAAGAAGAAAGTACATGGTTTGATTTGCCGGATCTAATAGTTAGCAATGGGTTCTTGTTGGGTCTTGATGAGAATTATTCTTCGTCATGTTCGTCCTCCTCCTCCTCCTCCTCGTCCTGGCAATTTCTTGTAGATGATCATGAGGACAACCATTTTCAATGGCACTCTGATTTTTCTCATACTATTTTTCCTGTTTGAGTTTTTTTCTTCTTCTTTTTTTCTTTTTGAATTAATTAAGTTCTGCTTTTTGTAATATTCTCTATTACCAAAACAAAAAAAAAAAAAAAAAGGAAAGAAAGAAGGCTGGTTGAGTTTGCTTGTTTGCTTGGACAACTTATATATATATTTATTTATTTATATTATACTTTTTTTTCTTCTTTTGGTAAGTTATTTTTTCCTTTTAATATAAATATATATTTCTTTTTCTTTTTTTACATTTTTAATATTTTAGTGTATGTGGTTAAATTTCAATAATAGATTTTAAATTATTCTTCTAATTAATGTGTTTATTTTATGGTTGATTTTTACTTTTCAAAAAGCTAGTCAAAATCCATTTATATAATTACTTTCTTCTAAAAAAATTGCTTTTTGAAAACTTGTTTTATTTTTTAATTAATGTGCGTAAACTAATATTAAGATTATAGTGAATGCATGCATGGATTAAAATAGAATGGGAGTTGAATGGTTAGTGAATAAACTATAGGGTTTTAACCCATTATAAATTTATATTTTTTTCTTTTACAAATTCTTTCACTTTGATGTTCTTTTTAATTATTGGTTTAGATTAGATTTATGGAAAGCTGATGGTCATTATTAATTTTGGTCAAAGTGGTGGGAGGATTTTTATCTTTTTGTGTATTTATAAAAGCTTTTGGGAACTTACAAATCAAT

mRNA sequence

ATGACTACAAACTCCCACCATTCCACCACCAGTTCCTCCGCCGTCTCCTGCCTCACAGCAACCAGCCGGAAAAGGCAAAGGAGTAGCACGAGTTCTGCCACGGAAAGCGAATCGGATCAAGAATCAAGTACCCCTAAATTCAGAGGGGTAAGGCTAAGAGCATGGGGAAAATGGGTGTCGGAAATCCGAGAACCGAGAAAGAAATCAAGAATATGGCTTGGCACTTATCCGACTGCAGAGATGGCGGCGCGTGCTCATGATGTAGCCGCACTCGCCATCAAAGGCCACCGTGCTTTCCTCAACTTCCCTCAACTCAAACACCAACTCCCTCGCCCTGCCTCCCTCTCCGCCAAAGATATTCAAGCCGCGGCCGCACAAGCCGCTGCGCTCAAACACGAACCCGAAACGCCCACATCGTGTCTAGAAGAAGGACTTGAAGAAGAAGAAGAAGAAAGTACATGGTTTGATTTGCCGGATCTAATAGTTAGCAATGGGTTCTTGTTGGGTCTTGATGAGAATTATTCTTCGTCATGTTCGTCCTCCTCCTCCTCCTCCTCGTCCTGGCAATTTCTTGTAGATGATCATGAGGACAACCATTTTCAATGGCACTCTGATTTTTCTCATACTATTTTTCCTGTTTGA

Coding sequence (CDS)

ATGACTACAAACTCCCACCATTCCACCACCAGTTCCTCCGCCGTCTCCTGCCTCACAGCAACCAGCCGGAAAAGGCAAAGGAGTAGCACGAGTTCTGCCACGGAAAGCGAATCGGATCAAGAATCAAGTACCCCTAAATTCAGAGGGGTAAGGCTAAGAGCATGGGGAAAATGGGTGTCGGAAATCCGAGAACCGAGAAAGAAATCAAGAATATGGCTTGGCACTTATCCGACTGCAGAGATGGCGGCGCGTGCTCATGATGTAGCCGCACTCGCCATCAAAGGCCACCGTGCTTTCCTCAACTTCCCTCAACTCAAACACCAACTCCCTCGCCCTGCCTCCCTCTCCGCCAAAGATATTCAAGCCGCGGCCGCACAAGCCGCTGCGCTCAAACACGAACCCGAAACGCCCACATCGTGTCTAGAAGAAGGACTTGAAGAAGAAGAAGAAGAAAGTACATGGTTTGATTTGCCGGATCTAATAGTTAGCAATGGGTTCTTGTTGGGTCTTGATGAGAATTATTCTTCGTCATGTTCGTCCTCCTCCTCCTCCTCCTCGTCCTGGCAATTTCTTGTAGATGATCATGAGGACAACCATTTTCAATGGCACTCTGATTTTTCTCATACTATTTTTCCTGTTTGA

Protein sequence

MTTNSHHSTTSSSAVSCLTATSRKRQRSSTSSATESESDQESSTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVSNGFLLGLDENYSSSCSSSSSSSSSWQFLVDDHEDNHFQWHSDFSHTIFPV
Homology
[Close]
BLAST of CsaV3_6G008650 vs. NCBI nr
Match: XP_004140628.1 (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus] >KGN46508.1 hypothetical protein Csa_6G104640 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103
           TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP
Sbjct: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103

Query: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS 163
           QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS
Sbjct: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS 163

Query: 164 NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV 214
           NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV
Sbjct: 164 NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV 213

[Close]
BLAST of CsaV3_6G008650 vs. NCBI nr
Match: XP_008460188.1 (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 155/170 (91.18%), Postives = 155/170 (91.18%), Query Frame = 0 

Query: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103
           TPKFRGVRLR WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP
Sbjct: 39  TPKFRGVRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 98

Query: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS 163
           QLKHQLPRPASLSAKDIQAAAAQAAALKHEPET TSC       EEEESTWFDLPDLIVS
Sbjct: 99  QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETATSC-----RGEEEESTWFDLPDLIVS 158

Query: 164 NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV 214
           NGFLLGLDENYS   XXXXXXXX   FLVDDHEDNHFQWHSDFSHTIFPV
Sbjct: 159 NGFLLGLDENYS-SSXXXXXXXXSWQFLVDDHEDNHFQWHSDFSHTIFPV 202

[Close]
BLAST of CsaV3_6G008650 vs. NCBI nr
Match: XP_022959279.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 1.8e-56
Identity = 126/172 (73.26%), Postives = 135/172 (78.49%), Query Frame = 0 

Query: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103
           TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP
Sbjct: 29  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 88

Query: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV- 163
           Q+KHQLPRPASLSAKDIQAAAAQAAALKH+P  PT          EEE TWFDLPDL+V 
Sbjct: 89  QIKHQLPRPASLSAKDIQAAAAQAAALKHQP-NPTESSPSETTSCEEEDTWFDLPDLVVR 148

Query: 164 --SNGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFP 213
             ++GFLL  D + S        XXXX      DH+D   QWHSD++HTIFP
Sbjct: 149 GINDGFLLDFDYSSS--------XXXXSWHFSGDHDD--LQWHSDYAHTIFP 189

[Close]
BLAST of CsaV3_6G008650 vs. NCBI nr
Match: XP_022974292.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 131/172 (76.16%), Postives = 139/172 (80.81%), Query Frame = 0 

Query: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103
           TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP
Sbjct: 29  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 88

Query: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV- 163
           Q+KHQLPRPASLSAKDIQAAAAQAAALKH+P  PT          EEE TWFDLPDL+V 
Sbjct: 89  QIKHQLPRPASLSAKDIQAAAAQAAALKHQP-NPTESSPSETTSCEEEETWFDLPDLVVR 148

Query: 164 --SNGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFP 213
             ++GFLL  D       XXXXXXXXXX     DH+D   QWHSD++HTIFP
Sbjct: 149 GINDGFLLDFD-------XXXXXXXXXXWHFSGDHDD--LQWHSDYAHTIFP 190

[Close]
BLAST of CsaV3_6G008650 vs. NCBI nr
Match: XP_023521023.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55
Identity = 131/172 (76.16%), Postives = 138/172 (80.23%), Query Frame = 0 

Query: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103
           TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP
Sbjct: 29  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 88

Query: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV- 163
           Q+KHQLPRPASLSAKDIQAAAAQAAALKH+P  PT          EEE TWFDLPDL+V 
Sbjct: 89  QIKHQLPRPASLSAKDIQAAAAQAAALKHQP-NPTESSPSETTSCEEEETWFDLPDLVVR 148

Query: 164 --SNGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFP 213
             ++GFLL  D       XXXXXXXXXX     DH+D   QWHSD+ HTIFP
Sbjct: 149 GINDGFLLDFD-------XXXXXXXXXXWHFSGDHDD--LQWHSDYPHTIFP 190

[Close]
BLAST of CsaV3_6G008650 vs. TAIR10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+
Sbjct: 38  PNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 97

Query: 105 LKHQLPRPASLSAKDIQAAAAQAAALKHE-PETPTSCLEEGLEEEEEESTWFDLPDLIV 163
           L + LPRPAS   KDIQ AAA AAA+  + PE+P+S +      ++  S   DLPDL++
Sbjct: 98  LAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSSTVTSSPVADDAFS---DLPDLLL 153

[Close]
BLAST of CsaV3_6G008650 vs. TAIR10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 5.6e-33
Identity = 75/127 (59.06%), Postives = 88/127 (69.29%), Query Frame = 0 

Query: 47  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLK 106
           +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG+  FLNFP+L 
Sbjct: 71  YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELS 130

Query: 107 HQLPRPASLSAKDIQAAAAQAAALK--HEPETPTSCLEEGLEEEEEESTWFDLPDLIVSN 166
             LPRP S S KDIQAAA +AA     H+P      +++ L +E   S          S+
Sbjct: 131 GLLPRPVSCSPKDIQAAATKAAEATTWHKP-----VIDKKLADELSHSELLSTAQSSTSS 190

Query: 167 GFLLGLD 172
            F+   D
Sbjct: 191 SFVFSSD 192

[Close]
BLAST of CsaV3_6G008650 vs. TAIR10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 7.4e-33
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A+LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 105 LKHQLPRPASLSAKDIQAAAAQAA 129
           L  +LPRP + S KDIQAAA+ AA
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAA 181

[Close]
BLAST of CsaV3_6G008650 vs. TAIR10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 6.2e-32
Identity = 65/84 (77.38%), Postives = 74/84 (88.10%), Query Frame = 0 

Query: 47  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLK 106
           +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVAAL+IKG  A LNFP+L 
Sbjct: 26  YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELA 85

Query: 107 HQLPRPASLSAKDIQAAAAQAAAL 131
             LPRP SLS +DIQAAAA+AA +
Sbjct: 86  DFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of CsaV3_6G008650 vs. TAIR10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-31
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P +RGVR+R+WGKWVSEIREPRKKSRIWLGT+PTAEMA RAHDVAA++IKG  A LNFP+
Sbjct: 17  PVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPE 76

Query: 105 LKHQLPRPASLSAKDIQAAAAQAAAL 131
           L   LPRP SLS +D++AAA +AA +
Sbjct: 77  LSKLLPRPVSLSPRDVRAAATKAALM 102

[Close]
BLAST of CsaV3_6G008650 vs. Swiss-Prot
Match: sp|Q9SUK8|ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.1e-33
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+
Sbjct: 38  PNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 97

Query: 105 LKHQLPRPASLSAKDIQAAAAQAAALKHE-PETPTSCLEEGLEEEEEESTWFDLPDLIV 163
           L + LPRPAS   KDIQ AAA AAA+  + PE+P+S +      ++  S   DLPDL++
Sbjct: 98  LAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSSTVTSSPVADDAFS---DLPDLLL 153

[Close]
BLAST of CsaV3_6G008650 vs. Swiss-Prot
Match: sp|Q9M210|ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 75/127 (59.06%), Postives = 88/127 (69.29%), Query Frame = 0 

Query: 47  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLK 106
           +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG+  FLNFP+L 
Sbjct: 71  YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELS 130

Query: 107 HQLPRPASLSAKDIQAAAAQAAALK--HEPETPTSCLEEGLEEEEEESTWFDLPDLIVSN 166
             LPRP S S KDIQAAA +AA     H+P      +++ L +E   S          S+
Sbjct: 131 GLLPRPVSCSPKDIQAAATKAAEATTWHKP-----VIDKKLADELSHSELLSTAQSSTSS 190

Query: 167 GFLLGLD 172
            F+   D
Sbjct: 191 SFVFSSD 192

[Close]
BLAST of CsaV3_6G008650 vs. Swiss-Prot
Match: sp|Q8LBQ7|ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A+LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 105 LKHQLPRPASLSAKDIQAAAAQAA 129
           L  +LPRP + S KDIQAAA+ AA
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAA 181

[Close]
BLAST of CsaV3_6G008650 vs. Swiss-Prot
Match: sp|Q52QU1|ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 65/84 (77.38%), Postives = 74/84 (88.10%), Query Frame = 0 

Query: 47  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLK 106
           +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVAAL+IKG  A LNFP+L 
Sbjct: 26  YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELA 85

Query: 107 HQLPRPASLSAKDIQAAAAQAAAL 131
             LPRP SLS +DIQAAAA+AA +
Sbjct: 86  DFLPRPVSLSQQDIQAAAAEAALM 109

[Close]
BLAST of CsaV3_6G008650 vs. Swiss-Prot
Match: sp|Q9M080|ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.6e-30
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P +RGVR+R+WGKWVSEIREPRKKSRIWLGT+PTAEMA RAHDVAA++IKG  A LNFP+
Sbjct: 17  PVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPE 76

Query: 105 LKHQLPRPASLSAKDIQAAAAQAAAL 131
           L   LPRP SLS +D++AAA +AA +
Sbjct: 77  LSKLLPRPVSLSPRDVRAAATKAALM 102

[Close]
BLAST of CsaV3_6G008650 vs. TrEMBL
Match: tr|A0A0A0KAN0|A0A0A0KAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.9e-83
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103
           TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP
Sbjct: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103

Query: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS 163
           QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS
Sbjct: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS 163

Query: 164 NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV 214
           NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV
Sbjct: 164 NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV 213

[Close]
BLAST of CsaV3_6G008650 vs. TrEMBL
Match: tr|A0A1S3CBH6|A0A1S3CBH6_CUCME (ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=LOC103499073 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 9.4e-75
Identity = 155/170 (91.18%), Postives = 155/170 (91.18%), Query Frame = 0 

Query: 44  TPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 103
           TPKFRGVRLR WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP
Sbjct: 39  TPKFRGVRLRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFP 98

Query: 104 QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIVS 163
           QLKHQLPRPASLSAKDIQAAAAQAAALKHEPET TSC       EEEESTWFDLPDLIVS
Sbjct: 99  QLKHQLPRPASLSAKDIQAAAAQAAALKHEPETATSC-----RGEEEESTWFDLPDLIVS 158

Query: 164 NGFLLGLDENYSXXXXXXXXXXXXXXFLVDDHEDNHFQWHSDFSHTIFPV 214
           NGFLLGLDENYS   XXXXXXXX   FLVDDHEDNHFQWHSDFSHTIFPV
Sbjct: 159 NGFLLGLDENYS-SSXXXXXXXXSWQFLVDDHEDNHFQWHSDFSHTIFPV 202

[Close]
BLAST of CsaV3_6G008650 vs. TrEMBL
Match: tr|A0A1L6CAW3|A0A1L6CAW3_9ROSI (AP2/ERF domain-containing transcription factor OS=Vernicia montana OX=316732 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.6e-36
Identity = 86/134 (64.18%), Postives = 97/134 (72.39%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P +RGVR R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAL IKG+ A LNFP+
Sbjct: 69  PTYRGVRKRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALTIKGNSAHLNFPE 128

Query: 105 LKHQLPRPASLSAKDIQAAAAQAAAL---KH--------------EPETPTSCLEEGLEE 162
           L H+LPRPAS S KDIQAAAA AA L   KH              EP +P S  E    +
Sbjct: 129 LAHELPRPASTSPKDIQAAAALAATLNNYKHSSINNGDVSKVIELEPHSPNSTEESLRND 188

[Close]
BLAST of CsaV3_6G008650 vs. TrEMBL
Match: tr|A0A067JY82|A0A067JY82_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14613 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.3e-35
Identity = 86/141 (60.99%), Postives = 101/141 (71.63%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           PK+RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG+ A+LNFP+
Sbjct: 80  PKYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSAYLNFPE 139

Query: 105 LKHQLPRPASLSAKDIQAAAAQAA----------ALKHE---PETPTSCLEEGLEEEEEE 164
           L H+LPRP + S KDIQAAAA+AA          A  H+     T T+   +    +E +
Sbjct: 140 LVHELPRPVTKSPKDIQAAAAKAALSETTQFQLQAEAHQLISSNTNTTSAMDNSNTQESD 199

Query: 165 STWFDLPDLIV------SNGF 167
            T FDLPDL +      SNGF
Sbjct: 200 DTLFDLPDLFIDGVDLKSNGF 220

[Close]
BLAST of CsaV3_6G008650 vs. TrEMBL
Match: tr|A0A2I0AZX3|A0A2I0AZX3_9ASPA (Ethylene-responsive transcription factor ERF034 OS=Apostasia shenzhenica OX=1088818 GN=ERF034 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34
Identity = 81/125 (64.80%), Postives = 96/125 (76.80%), Query Frame = 0 

Query: 45  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 104
           P +RGVR+R WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A+LNFP 
Sbjct: 49  PTYRGVRMRTWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGQSAYLNFPD 108

Query: 105 LKHQLPRPASLSAKDIQAAAAQAAAL-----KHEP--ETPTSCLEEGLEEEEEESTWFDL 163
           L HQLPRPA+ S KDIQ AAA+AAA      +H P    P+S      + +++++  FDL
Sbjct: 109 LAHQLPRPATASPKDIQFAAAKAAAAPKSDGRHSPADRAPSS---PTADNDDDDAALFDL 168

The following BLAST results are available for this feature:
BLAST of CsaV3_6G008650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140628.12.9e-83100.00PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus... [more]
XP_008460188.11.4e-7491.18PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo][more]
XP_022959279.11.8e-5673.26ethylene-responsive transcription factor ERF039-like [Cucurbita moschata][more]
XP_022974292.11.1e-5576.16ethylene-responsive transcription factor ERF039-like [Cucurbita maxima][more]
XP_023521023.11.9e-5576.16ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo... [more]
BLAST of CsaV3_6G008650 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16750.13.9e-3464.71Integrase-type DNA-binding superfamily protein[more]
AT3G60490.15.6e-3359.06Integrase-type DNA-binding superfamily protein[more]
AT2G44940.17.4e-3379.76Integrase-type DNA-binding superfamily protein[more]
AT2G25820.16.2e-3277.38Integrase-type DNA-binding superfamily protein[more]
AT4G32800.13.1e-3172.09Integrase-type DNA-binding superfamily protein[more]
BLAST of CsaV3_6G008650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SUK8|ERF39_ARATH7.1e-3364.71Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9M210|ERF35_ARATH1.0e-3159.06Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q8LBQ7|ERF34_ARATH1.3e-3179.76Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q52QU1|ERF42_ARATH1.1e-3077.38Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9M080|ERF43_ARATH5.6e-3072.09Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of CsaV3_6G008650 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KAN0|A0A0A0KAN0_CUCSA1.9e-83100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=4 SV=1[more]
tr|A0A1S3CBH6|A0A1S3CBH6_CUCME9.4e-7591.18ethylene-responsive transcription factor ERF039-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A1L6CAW3|A0A1L6CAW3_9ROSI8.6e-3664.18AP2/ERF domain-containing transcription factor OS=Vernicia montana OX=316732 PE=... [more]
tr|A0A067JY82|A0A067JY82_JATCU3.3e-3560.99Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14613 PE=4 SV=1[more]
tr|A0A2I0AZX3|A0A2I0AZX3_9ASPA2.8e-3464.80Ethylene-responsive transcription factor ERF034 OS=Apostasia shenzhenica OX=1088... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G008650.1CsaV3_6G008650.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 47..58
score: 63.48
coord: 69..85
score: 66.1
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 46..109
e-value: 1.7E-35
score: 133.9
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 45..96
e-value: 2.4E-13
score: 50.0
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 46..103
score: 22.893
IPR001471AP2/ERF domainCDDcd00018AP2coord: 45..103
e-value: 5.49306E-31
score: 108.898
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 46..105
e-value: 1.9E-28
score: 100.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 6..189
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 46..104

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G008650CSPI06G08270Wild cucumber (PI 183967)cpicucB364
CsaV3_6G008650Cucsa.121080Cucumber (Gy14) v1cgycucB159
CsaV3_6G008650CmaCh08G001540Cucurbita maxima (Rimu)cmacucB1083
CsaV3_6G008650CmoCh08G001530Cucurbita moschata (Rifu)cmocucB1065
CsaV3_6G008650CmoCh17G004950Cucurbita moschata (Rifu)cmocucB0437
CsaV3_6G008650CsGy6G008350Cucumber (Gy14) v2cgybcucB298
CsaV3_6G008650Carg04979Silver-seed gourdcarcucB0100
CsaV3_6G008650Carg26728Silver-seed gourdcarcucB0157
CsaV3_6G008650Cla006719Watermelon (97103) v1cucwmB567
CsaV3_6G008650MELO3C022281Melon (DHL92) v3.5.1cucmeB435
CsaV3_6G008650Lsi09G016880Bottle gourd (USVL1VR-Ls)cuclsiB420
CsaV3_6G008650MELO3C022281.2Melon (DHL92) v3.6.1cucmedB425
CsaV3_6G008650Cla97C06G111840Watermelon (97103) v2cucwmbB494
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G008650Silver-seed gourdcarcucB0096
CsaV3_6G008650Silver-seed gourdcarcucB1009
CsaV3_6G008650Cucurbita maxima (Rimu)cmacucB0445
CsaV3_6G008650Cucurbita maxima (Rimu)cmacucB1067
CsaV3_6G008650Cucurbita moschata (Rifu)cmocucB1049
CsaV3_6G008650Cucurbita pepo (Zucchini)cpecucB0173
CsaV3_6G008650Cucurbita pepo (Zucchini)cpecucB0397
CsaV3_6G008650Bottle gourd (USVL1VR-Ls)cuclsiB424
CsaV3_6G008650Watermelon (Charleston Gray)cucwcgB497
CsaV3_6G008650Watermelon (Charleston Gray)cucwcgB504
CsaV3_6G008650Watermelon (97103) v1cucwmB570
CsaV3_6G008650Watermelon (97103) v2cucwmbB487
CsaV3_6G008650Wax gourdcucwgoB551