CmoCh17G004950 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G004950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor 1
LocationCmo_Chr17 : 3914971 .. 3915543 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCACAACCTCCCACCATTCCGCCACCGTTTCCTCCGCCGTAACCTGCCGGAAAAGGCGGAGGACCTTAACCGAAGAATCAACCCCCAAATTCAGAGGAGTTCGCCTGAGAGCATGGGGGAAATGGGTGTCGGAAATAAGAGAGCCAAGGAAGAAATCAAGAATATGGCTCGGAACATACCCCACGGCCGAGATGGCAGCGCGTGCACACGACGTGGCTGCACTTGCCATCAAAGGCCACCGCGCCTTCCTCAATTTCCCTCAAATCAAACACCAACTCCCCCGCCCAGCCTCCCTTTCCGCCAAGGACATTCAGGCCGCCGCCGCACAGGCCGCCGCCCTCAAACACCAGCCAAACCCCACCGAATCAAGTCCCTCGGAAACGACGTCGTGTGAGGAAGAAGACACATGGTTTGATCTGCCGGATCTTGTTGTACGAGGAATAAACGATGGGTTCTTGTTGGATTTTGATTATTCGTCGTCTTCGTCGTCATCATCATGGCACTTCTCCGGAGATCACGACGACCTCCAATGGCACTCCGATTATGCTCATACCATTTTTCCCGCTTGA

mRNA sequence

ATGACCACAACCTCCCACCATTCCGCCACCGTTTCCTCCGCCGTAACCTGCCGGAAAAGGCGGAGGACCTTAACCGAAGAATCAACCCCCAAATTCAGAGGAGTTCGCCTGAGAGCATGGGGGAAATGGGTGTCGGAAATAAGAGAGCCAAGGAAGAAATCAAGAATATGGCTCGGAACATACCCCACGGCCGAGATGGCAGCGCGTGCACACGACGTGGCTGCACTTGCCATCAAAGGCCACCGCGCCTTCCTCAATTTCCCTCAAATCAAACACCAACTCCCCCGCCCAGCCTCCCTTTCCGCCAAGGACATTCAGGCCGCCGCCGCACAGGCCGCCGCCCTCAAACACCAGCCAAACCCCACCGAATCAAGTCCCTCGGAAACGACGTCGTGTGAGGAAGAAGACACATGGTTTGATCTGCCGGATCTTGTTGTACGAGGAATAAACGATGGGTTCTTGTTGGATTTTGATTATTCGTCGTCTTCGTCGTCATCATCATGGCACTTCTCCGGAGATCACGACGACCTCCAATGGCACTCCGATTATGCTCATACCATTTTTCCCGCTTGA

Coding sequence (CDS)

ATGACCACAACCTCCCACCATTCCGCCACCGTTTCCTCCGCCGTAACCTGCCGGAAAAGGCGGAGGACCTTAACCGAAGAATCAACCCCCAAATTCAGAGGAGTTCGCCTGAGAGCATGGGGGAAATGGGTGTCGGAAATAAGAGAGCCAAGGAAGAAATCAAGAATATGGCTCGGAACATACCCCACGGCCGAGATGGCAGCGCGTGCACACGACGTGGCTGCACTTGCCATCAAAGGCCACCGCGCCTTCCTCAATTTCCCTCAAATCAAACACCAACTCCCCCGCCCAGCCTCCCTTTCCGCCAAGGACATTCAGGCCGCCGCCGCACAGGCCGCCGCCCTCAAACACCAGCCAAACCCCACCGAATCAAGTCCCTCGGAAACGACGTCGTGTGAGGAAGAAGACACATGGTTTGATCTGCCGGATCTTGTTGTACGAGGAATAAACGATGGGTTCTTGTTGGATTTTGATTATTCGTCGTCTTCGTCGTCATCATCATGGCACTTCTCCGGAGATCACGACGACCTCCAATGGCACTCCGATTATGCTCATACCATTTTTCCCGCTTGA
Homology
[Close]
BLAST of CmoCh17G004950 vs. Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.6e-35
Identity = 82/134 (61.19%), Postives = 95/134 (70.90%), Query Frame = 1 

Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+
Sbjct: 38  PNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 97

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVV--- 149
           + + LPRPAS   KDIQ AAA AAA+  +  P   S + T+S   +D + DLPDL++   
Sbjct: 98  LAYHLPRPASADPKDIQEAAAAAAAVDWKA-PESPSSTVTSSPVADDAFSDLPDLLLDVN 157

Query: 150 -RGINDGFLLDFDY 160
               NDGF   F Y
Sbjct: 158 DHNKNDGFWDSFPY 170

[Close]
BLAST of CmoCh17G004950 vs. Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-33
Identity = 85/153 (55.56%), Postives = 99/153 (64.71%), Query Frame = 1 

Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREP+KKSRIWLGT+ TAEMAARAHDVAALAIKG  A LNFP+
Sbjct: 43  PNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPE 102

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAAL----------KHQPNPTESSPSETTSCE-EEDTW 149
           + + LPRPAS   KDIQAAAA AAA              P+PT +  S        +D +
Sbjct: 103 LAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAF 162

Query: 150 FDLPDLVVRGIN---DGFLLDFDYSSSSSSSSW 169
            DLPDL++  +N   DGF   F Y     S S+
Sbjct: 163 SDLPDLLL-NVNHNIDGFWDSFPYEEPFLSQSY 194

[Close]
BLAST of CmoCh17G004950 vs. Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 75/118 (63.56%), Postives = 90/118 (76.27%), Query Frame = 1 

Query: 19  KRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 78
           KRR+T   +  P +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI
Sbjct: 87  KRRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 146

Query: 79  KGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEED 137
           KG  A+LNFP++  +LPRP + S KDIQAAA+  AA+  Q +  + S SE     E +
Sbjct: 147 KGTTAYLNFPKLAGELPRPVTNSPKDIQAAAS-LAAVNWQDSVNDVSNSEVAEIVEAE 203

[Close]
BLAST of CmoCh17G004950 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.4e-31
Identity = 88/176 (50.00%), Postives = 110/176 (62.50%), Query Frame = 1 

Query: 5   SHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTA 64
           SH S T  S+    K+++  T+E    +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTA
Sbjct: 4   SHGSDTECSS----KKKKEKTKEKGV-YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTA 63

Query: 65  EMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTES 124
           EMAARAHDVAAL+IKG  A LNFP++   LPRP SLS +DIQAAAA+AA +  +  P   
Sbjct: 64  EMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHL 123

Query: 125 SPSET---TSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDL 178
               T   T C+ E         + +  +         SSSSSSSS   SG+  D+
Sbjct: 124 QDDSTPLQTRCDTEK--------IEKWSSSSSSASSSSSSSSSSSSSMLSGELGDI 166

[Close]
BLAST of CmoCh17G004950 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 1 

Query: 18  RKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 77
           +K +R       P +RGVR+R WGKWVSEIREPRKKSRIWLGT+PT EMAARAHDVAAL+
Sbjct: 37  KKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALS 96

Query: 78  IKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEEDT 137
           IKG  A LNFP++    PRP SLS +DIQ AA +AA ++    PT S  S T+S     +
Sbjct: 97  IKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME----PTTSFSSSTSSSSSLSS 156

Query: 138 WFDLPDLVV 147
              L  LV+
Sbjct: 157 TSSLESLVL 161

[Close]
BLAST of CmoCh17G004950 vs. TrEMBL
Match: A0A0A0KAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.9e-66
Identity = 151/215 (70.23%), Postives = 162/215 (75.35%), Query Frame = 1 

Query: 1   MTTTSHHSATVSSAVTC-----RKRRRTLT----------EESTPKFRGVRLRAWGKWVS 60
           MTT SHHS T SSAV+C     RKR+R+ T          E STPKFRGVRLRAWGKWVS
Sbjct: 1   MTTNSHHSTTSSSAVSCLTATSRKRQRSSTSSATESESDQESSTPKFRGVRLRAWGKWVS 60

Query: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDI 120
           EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KHQLPRPASLSAKDI
Sbjct: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDI 120

Query: 121 QAAAAQAAALKHQP-NPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFD------ 180
           QAAAAQAAALKH+P  PT          EEE TWFDLPDL+V   ++GFLL  D      
Sbjct: 121 QAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV---SNGFLLGLDENYSSS 180

Query: 181 -YSSSSSSSSWHF-SGDHDD--LQWHSDYAHTIFP 190
             SSSSSSSSW F   DH+D   QWHSD++HTIFP
Sbjct: 181 CSSSSSSSSSWQFLVDDHEDNHFQWHSDFSHTIFP 212

[Close]
BLAST of CmoCh17G004950 vs. TrEMBL
Match: A0A067JY82_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14613 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-36
Identity = 91/157 (57.96%), Postives = 110/157 (70.06%), Query Frame = 1 

Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           PK+RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG+ A+LNFP+
Sbjct: 80  PKYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSAYLNFPE 139

Query: 90  IKHQLPRPASLSAKDIQAAAAQAA-------ALKHQPNPTESSPSETTSC-------EEE 149
           + H+LPRP + S KDIQAAAA+AA        L+ + +   SS + TTS        E +
Sbjct: 140 LVHELPRPVTKSPKDIQAAAAKAALSETTQFQLQAEAHQLISSNTNTTSAMDNSNTQESD 199

Query: 150 DTWFDLPDLVVRGI---NDGFLLDFDYSSSSSSSSWH 170
           DT FDLPDL + G+   ++GF           S SWH
Sbjct: 200 DTLFDLPDLFIDGVDLKSNGF--------CQYSPSWH 228

[Close]
BLAST of CmoCh17G004950 vs. TrEMBL
Match: A0A0D2QYV4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G165300 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.2e-36
Identity = 95/172 (55.23%), Postives = 114/172 (66.28%), Query Frame = 1 

Query: 18  RKRRRTLTEESTPK---FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 77
           +KR+R+    +  K   FRGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA
Sbjct: 70  KKRQRSTCGNNDSKHGTFRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 129

Query: 78  ALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAA----------------LKHQ 137
           ALAIKG  A+LNFP+I  QLPRPA+ S KDIQAAA+QAAA                + H+
Sbjct: 130 ALAIKGPSAYLNFPEIAKQLPRPATTSPKDIQAAASQAAASTFLDTRQCNVQTEAGVSHE 189

Query: 138 PNPTESSPSETTSCEEEDTWFDLPDLVV--RGINDGFLLDFDYSSSSSSSSW 169
                   S + S +++DT FDLPDL++     NDGF        S SSS+W
Sbjct: 190 ELHNTQESSSSPSIDDDDTLFDLPDLMIDTADRNDGF-------CSYSSSAW 234

[Close]
BLAST of CmoCh17G004950 vs. TrEMBL
Match: A0A068UMC9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028837001 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 9.3e-36
Identity = 98/180 (54.44%), Postives = 116/180 (64.44%), Query Frame = 1 

Query: 18  RKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 77
           RK+ +   +E  P +RGVR R WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA
Sbjct: 95  RKKHKNGDDEKHPTYRGVRKRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 154

Query: 78  IKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAAL----------KHQP-------- 137
           IKGH A+LNFP++ H+LPRPA+ S KDIQAAAA+AAA           + +P        
Sbjct: 155 IKGHSAYLNFPRLAHELPRPATTSPKDIQAAAAKAAAATFPGENGGGAEAEPIQAELTNC 214

Query: 138 ---------NPTESSPSETTSCEEEDTWFDLPDLV--VRGINDGFLLDFDYSSSSSSSSW 169
                    N  ESS S +T  + +DT+FDLPDL   V G  D   LD  ++    SSSW
Sbjct: 215 HSSTDFSLHNMQESSNSASTDDDIDDTFFDLPDLSFDVTGATDH--LD-GFNCFHGSSSW 271

[Close]
BLAST of CmoCh17G004950 vs. TrEMBL
Match: V5RF18_COFAR (ERF transcription factor 04 OS=Coffea arabica PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35
Identity = 98/180 (54.44%), Postives = 115/180 (63.89%), Query Frame = 1 

Query: 18  RKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 77
           RK+ +   +E  P +RGVR R WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA
Sbjct: 110 RKKHKNGDDEKHPTYRGVRKRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 169

Query: 78  IKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAAL----------KHQP-------- 137
           IKGH A+LNFP + H+LPRPA+ S KDIQAAAA+AAA           + +P        
Sbjct: 170 IKGHSAYLNFPHLAHELPRPATTSPKDIQAAAAKAAAATFPGENGGGAEAEPIQAELTNC 229

Query: 138 ---------NPTESSPSETTSCEEEDTWFDLPDLV--VRGINDGFLLDFDYSSSSSSSSW 169
                    N  ESS S +T  + +DT+FDLPDL   V G  D   LD  ++    SSSW
Sbjct: 230 HSSTDFSLHNMQESSNSPSTDDDIDDTFFDLPDLSFDVTGATDH--LD-GFNCFHGSSSW 286

[Close]
BLAST of CmoCh17G004950 vs. TAIR10
Match: AT4G16750.1 (AT4G16750.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 148.3 bits (373), Expect = 4.8e-36
Identity = 82/134 (61.19%), Postives = 95/134 (70.90%), Query Frame = 1 

Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A LNFP+
Sbjct: 38  PNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 97

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVV--- 149
           + + LPRPAS   KDIQ AAA AAA+  +  P   S + T+S   +D + DLPDL++   
Sbjct: 98  LAYHLPRPASADPKDIQEAAAAAAAVDWKA-PESPSSTVTSSPVADDAFSDLPDLLLDVN 157

Query: 150 -RGINDGFLLDFDY 160
               NDGF   F Y
Sbjct: 158 DHNKNDGFWDSFPY 170

[Close]
BLAST of CmoCh17G004950 vs. TAIR10
Match: AT2G35700.1 (AT2G35700.1 ERF family protein 38)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 85/153 (55.56%), Postives = 99/153 (64.71%), Query Frame = 1 

Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           P FRGVR+R WGKWVSEIREP+KKSRIWLGT+ TAEMAARAHDVAALAIKG  A LNFP+
Sbjct: 43  PNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPE 102

Query: 90  IKHQLPRPASLSAKDIQAAAAQAAAL----------KHQPNPTESSPSETTSCE-EEDTW 149
           + + LPRPAS   KDIQAAAA AAA              P+PT +  S        +D +
Sbjct: 103 LAYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAF 162

Query: 150 FDLPDLVVRGIN---DGFLLDFDYSSSSSSSSW 169
            DLPDL++  +N   DGF   F Y     S S+
Sbjct: 163 SDLPDLLL-NVNHNIDGFWDSFPYEEPFLSQSY 194

[Close]
BLAST of CmoCh17G004950 vs. TAIR10
Match: AT2G44940.1 (AT2G44940.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-33
Identity = 75/118 (63.56%), Postives = 90/118 (76.27%), Query Frame = 1 

Query: 19  KRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 78
           KRR+T   +  P +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI
Sbjct: 87  KRRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 146

Query: 79  KGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEED 137
           KG  A+LNFP++  +LPRP + S KDIQAAA+  AA+  Q +  + S SE     E +
Sbjct: 147 KGTTAYLNFPKLAGELPRPVTNSPKDIQAAAS-LAAVNWQDSVNDVSNSEVAEIVEAE 203

[Close]
BLAST of CmoCh17G004950 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32
Identity = 88/176 (50.00%), Postives = 110/176 (62.50%), Query Frame = 1 

Query: 5   SHHSATVSSAVTCRKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTA 64
           SH S T  S+    K+++  T+E    +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTA
Sbjct: 4   SHGSDTECSS----KKKKEKTKEKGV-YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTA 63

Query: 65  EMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTES 124
           EMAARAHDVAAL+IKG  A LNFP++   LPRP SLS +DIQAAAA+AA +  +  P   
Sbjct: 64  EMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHL 123

Query: 125 SPSET---TSCEEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSWHFSGDHDDL 178
               T   T C+ E         + +  +         SSSSSSSS   SG+  D+
Sbjct: 124 QDDSTPLQTRCDTEK--------IEKWSSSSSSASSSSSSSSSSSSSMLSGELGDI 166

[Close]
BLAST of CmoCh17G004950 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-31
Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 1 

Query: 18  RKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 77
           +K +R       P +RGVR+R WGKWVSEIREPRKKSRIWLGT+PT EMAARAHDVAAL+
Sbjct: 37  KKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALS 96

Query: 78  IKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAALKHQPNPTESSPSETTSCEEEDT 137
           IKG  A LNFP++    PRP SLS +DIQ AA +AA ++    PT S  S T+S     +
Sbjct: 97  IKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME----PTTSFSSSTSSSSSLSS 156

Query: 138 WFDLPDLVV 147
              L  LV+
Sbjct: 157 TSSLESLVL 161

[Close]
BLAST of CmoCh17G004950 vs. NCBI nr
Match: gi|449445736|ref|XP_004140628.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 5.5e-66
Identity = 151/215 (70.23%), Postives = 162/215 (75.35%), Query Frame = 1 

Query: 1   MTTTSHHSATVSSAVTC-----RKRRRTLT----------EESTPKFRGVRLRAWGKWVS 60
           MTT SHHS T SSAV+C     RKR+R+ T          E STPKFRGVRLRAWGKWVS
Sbjct: 1   MTTNSHHSTTSSSAVSCLTATSRKRQRSSTSSATESESDQESSTPKFRGVRLRAWGKWVS 60

Query: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDI 120
           EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KHQLPRPASLSAKDI
Sbjct: 61  EIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDI 120

Query: 121 QAAAAQAAALKHQP-NPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFD------ 180
           QAAAAQAAALKH+P  PT          EEE TWFDLPDL+V   ++GFLL  D      
Sbjct: 121 QAAAAQAAALKHEPETPTSCLEEGLEEEEEESTWFDLPDLIV---SNGFLLGLDENYSSS 180

Query: 181 -YSSSSSSSSWHF-SGDHDD--LQWHSDYAHTIFP 190
             SSSSSSSSW F   DH+D   QWHSD++HTIFP
Sbjct: 181 CSSSSSSSSSWQFLVDDHEDNHFQWHSDFSHTIFP 212

[Close]
BLAST of CmoCh17G004950 vs. NCBI nr
Match: gi|659120426|ref|XP_008460188.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 9.4e-66
Identity = 148/208 (71.15%), Postives = 159/208 (76.44%), Query Frame = 1 

Query: 1   MTTTSHHSATVSSAVTCRKRRRTLT----------EESTPKFRGVRLRAWGKWVSEIREP 60
           MTT SHHS T SSA T RKR+R+ T          E STPKFRGVRLR WGKWVSEIREP
Sbjct: 1   MTTNSHHSTTSSSATTSRKRQRSSTSSATESESDQEISTPKFRGVRLRTWGKWVSEIREP 60

Query: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAA 120
           RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ+KHQLPRPASLSAKDIQAAAA
Sbjct: 61  RKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQLKHQLPRPASLSAKDIQAAAA 120

Query: 121 QAAALKHQPNPTESSPSETTSCEEEDTWFDLPDLVVRGINDGFLLDFD------YSSSSS 180
           QAAALKH+P    S   E    EEE TWFDLPDL+V   ++GFLL  D       SSSSS
Sbjct: 121 QAAALKHEPETATSCRGE----EEESTWFDLPDLIV---SNGFLLGLDENYSSSCSSSSS 180

Query: 181 SSSWHF-SGDHDD--LQWHSDYAHTIFP 190
           S+SW F   DH+D   QWHSD++HTIFP
Sbjct: 181 STSWQFLVDDHEDNHFQWHSDFSHTIFP 201

[Close]
BLAST of CmoCh17G004950 vs. NCBI nr
Match: gi|802700333|ref|XP_012083682.1| (PREDICTED: ethylene-responsive transcription factor ERF034 [Jatropha curcas])

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 91/157 (57.96%), Postives = 110/157 (70.06%), Query Frame = 1 

Query: 30  PKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRAFLNFPQ 89
           PK+RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG+ A+LNFP+
Sbjct: 80  PKYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSAYLNFPE 139

Query: 90  IKHQLPRPASLSAKDIQAAAAQAA-------ALKHQPNPTESSPSETTSC-------EEE 149
           + H+LPRP + S KDIQAAAA+AA        L+ + +   SS + TTS        E +
Sbjct: 140 LVHELPRPVTKSPKDIQAAAAKAALSETTQFQLQAEAHQLISSNTNTTSAMDNSNTQESD 199

Query: 150 DTWFDLPDLVVRGI---NDGFLLDFDYSSSSSSSSWH 170
           DT FDLPDL + G+   ++GF           S SWH
Sbjct: 200 DTLFDLPDLFIDGVDLKSNGF--------CQYSPSWH 228

[Close]
BLAST of CmoCh17G004950 vs. NCBI nr
Match: gi|823151036|ref|XP_012475346.1| (PREDICTED: ethylene-responsive transcription factor ERF034-like [Gossypium raimondii])

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-36
Identity = 95/172 (55.23%), Postives = 114/172 (66.28%), Query Frame = 1 

Query: 18  RKRRRTLTEESTPK---FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 77
           +KR+R+    +  K   FRGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA
Sbjct: 70  KKRQRSTCGNNDSKHGTFRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVA 129

Query: 78  ALAIKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAA----------------LKHQ 137
           ALAIKG  A+LNFP+I  QLPRPA+ S KDIQAAA+QAAA                + H+
Sbjct: 130 ALAIKGPSAYLNFPEIAKQLPRPATTSPKDIQAAASQAAASTFLDTRQCNVQTEAGVSHE 189

Query: 138 PNPTESSPSETTSCEEEDTWFDLPDLVV--RGINDGFLLDFDYSSSSSSSSW 169
                   S + S +++DT FDLPDL++     NDGF        S SSS+W
Sbjct: 190 ELHNTQESSSSPSIDDDDTLFDLPDLMIDTADRNDGF-------CSYSSSAW 234

[Close]
BLAST of CmoCh17G004950 vs. NCBI nr
Match: gi|502103052|ref|XP_004492188.1| (PREDICTED: ethylene-responsive transcription factor ERF034 [Cicer arietinum])

HSP 1 Score: 159.1 bits (401), Expect = 7.8e-36
Identity = 96/179 (53.63%), Postives = 115/179 (64.25%), Query Frame = 1 

Query: 18  RKRRRTLTEESTPKFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 77
           +KR R   +   P +RGVR+RAWGK+VSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA
Sbjct: 43  KKRERKQNDTKHPTYRGVRMRAWGKYVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 102

Query: 78  IKGHRAFLNFPQIKHQLPRPASLSAKDIQAAAAQAAA-----LKHQPNPTE--------- 137
           IKGH A+LNFP +   LPRP++ S KDIQAAAA+AAA     +K Q N  +         
Sbjct: 103 IKGHSAYLNFPNLAQNLPRPSTTSPKDIQAAAAKAAATIFVEIKDQQNQEDQDSSSTLSL 162

Query: 138 -------SSPSETTSC-------EEEDTWFDLPDLVVRGINDGFLLDFDYSSSSSSSSW 169
                  +SPS TT+        +++DT FDLPDL++   N  F        S SSSSW
Sbjct: 163 ENVRESSNSPSSTTTVTTATTDDDDDDTLFDLPDLLLDDKNGLF--------SYSSSSW 213

The following BLAST results are available for this feature:
BLAST of CmoCh17G004950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF39_ARATH8.6e-3561.19Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF38_ARATH2.1e-3355.56Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF34_ARATH1.8e-3263.56Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF42_ARATH3.4e-3150.00Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04... [more]
DREB3_ARATH2.2e-3056.59Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB... [more]
BLAST of CmoCh17G004950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAN0_CUCSA3.9e-6670.23Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104640 PE=4 SV=1[more]
A0A067JY82_JATCU1.9e-3657.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14613 PE=4 SV=1[more]
A0A0D2QYV4_GOSRA3.2e-3655.23Uncharacterized protein OS=Gossypium raimondii GN=B456_004G165300 PE=4 SV=1[more]
A0A068UMC9_COFCA9.3e-3654.44Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028837001 PE=4 SV=1[more]
V5RF18_COFAR1.2e-3554.44ERF transcription factor 04 OS=Coffea arabica PE=2 SV=1[more]
BLAST of CmoCh17G004950 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16750.14.8e-3661.19 Integrase-type DNA-binding superfamily protein[more]
AT2G35700.11.2e-3455.56 ERF family protein 38[more]
AT2G44940.11.0e-3363.56 Integrase-type DNA-binding superfamily protein[more]
AT2G25820.11.9e-3250.00 Integrase-type DNA-binding superfamily protein[more]
AT5G11590.11.2e-3156.59 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh17G004950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445736|ref|XP_004140628.1|5.5e-6670.23PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus... [more]
gi|659120426|ref|XP_008460188.1|9.4e-6671.15PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis melo][more]
gi|802700333|ref|XP_012083682.1|2.7e-3657.96PREDICTED: ethylene-responsive transcription factor ERF034 [Jatropha curcas][more]
gi|823151036|ref|XP_012475346.1|4.6e-3655.23PREDICTED: ethylene-responsive transcription factor ERF034-like [Gossypium raimo... [more]
gi|502103052|ref|XP_004492188.1|7.8e-3653.63PREDICTED: ethylene-responsive transcription factor ERF034 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G004950.1CmoCh17G004950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 54..70
score: 9.8E-10coord: 32..43
score: 9.8
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 31..89
score: 5.6
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 30..81
score: 1.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 31..94
score: 4.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 31..88
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 31..88
score: 3.14
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 18..182
score: 9.4
NoneNo IPR availablePANTHERPTHR31985:SF11ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF035coord: 18..182
score: 9.4