CmoCh07G006500 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTGCGCAGATAGAGCTTTCAGTTCGTACTCCAATATTACGTTCCTTCCGATCCCATTATAAGTACCCATTACCCAACTCACCAACTTCATTCCATTCTCCCCTGTTTTTTCTCTTTCCCTCAATTTTAAATTAATAAACCTTCTGGAATTCATTTGCTCTCCCGCATTTACCCTCTTCGCTGATCTGGAAAACGTCACGTCCTTTGTTCAGAACCGAGATTCTTAACGTGCGTCGTGGAGAGGGTAATCAAGGATACCGTCAGTCCTCACACTTCTTTACTCAATTTTTCATAATCTCCTTCCTCTCCTCTGTCTCATACCCTAAAACCACTGCTCTTCTCCTTAAAAAACTACACCACTTGGAATTCTTTACTTGGGAGATTAGATAGCTGCAAACAGAATGGGGAACTGCCAGGCGGCGGAGGCGGCGACGGTGGTCATTCAACACCCTGGGATTAATCCCAAGATCGAGAGGATTTATTGGTCCGTAAGTGCACACCAGATCATGAACTCCAACCCTGGCCATTACGTTGCGCTGGTTGTTACCTCGTCCACTTTGAAGACCCAAAATGGTACCCCGATCAAGCAGCTCAAACTCCTCCGCCCCGATGACACGCTTCTTATCGGCCATGTCTATCGTCTCATCACCTTCGAGGGTAATTCTTTATATTTCTCAAATATTTATTTTAAAAAAAACTATATTTTAGTTGCGTTTGTTCTTGTTTCTTTTGGTTCAGATGTATTGAAGGAATTTGCTGCAAAGAAATGCGTGAAACTGGGGAAATTGCTTAAAGAGGGAGGAGCACTCTCGATTGGGATGAAGATAAACGACACAAATTCTGCTTCAAATCCAAATTCAAATTCTAAATCCCAAAATTACATGAAGGTAATCGAATACCCATTAACCTTAATCATGCTCCAAATCCCCAAAAGTTGATTTATATAATTTCTTTTTCATGATTACACTCTGATTAAAACCAAAAATCAAAAGAAAAAAAAAAAATAACAAAAAGCTGTTTTTCTGTATAAAGAAGTATCTGAAAATGGTTTGAAATTTAAGGCCACGGATATCAAGGGAAATGCCTTTTATGGGCCACTTCAAGAACCTTGTCAGAAATTTAAGTAAGCTGTAGAGCTGTAGAGTGCAGAGGTATTCAATTATATATCATCAAGTCAAACGTATATAGTTTGGTAATGGGGTTTTGCCTGTATTTTAAATATATTTATTGGCTCGCCTTCGCTGTCTCCTTTGGTCCATATCAATATCTTCAGGAAAACGTGAACATTATTCCCACTTCTTCGTCTCATTGGGGGTCAAATCCAAACGTGATGCTGAAATAATTATTTTGAATATATGGTCAGGCGGAGCAGGAGGGGGGCCGTCGCCTGGAAAACAGAGACGCCGGCAGCCGCAGTGGTGGAAGAGGCGGAGGAGGACCCAGAGGCATGGGTAGGCATTACGGTGGTGGGGGTCAATGGCGGCCAGCCTTACAGAGCATTGCAGAAGTTGGAATTAATTGAAGAATTAAAAAGAAA GTTTTGCGCAGATAGAGCTTTCAGTTCGTACTCCAATATTACGTTCCTTCCGATCCCATTATAAGTACCCATTACCCAACTCACCAACTTCATTCCATTCTCCCCTGTTTTTTCTCTTTCCCTCAATTTTAAATTAATAAACCTTCTGGAATTCATTTGCTCTCCCGCATTTACCCTCTTCGCTGATCTGGAAAACGTCACGTCCTTTGTTCAGAACCGAGATTCTTAACGTGCGTCGTGGAGAGGGTAATCAAGGATACCGTCAGTCCTCACACTTCTTTACTCAATTTTTCATAATCTCCTTCCTCTCCTCTGTCTCATACCCTAAAACCACTGCTCTTCTCCTTAAAAAACTACACCACTTGGAATTCTTTACTTGGGAGATTAGATAGCTGCAAACAGAATGGGGAACTGCCAGGCGGCGGAGGCGGCGACGGTGGTCATTCAACACCCTGGGATTAATCCCAAGATCGAGAGGATTTATTGGTCCGTAAGTGCACACCAGATCATGAACTCCAACCCTGGCCATTACGTTGCGCTGGTTGTTACCTCGTCCACTTTGAAGACCCAAAATGGTACCCCGATCAAGCAGCTCAAACTCCTCCGCCCCGATGACACGCTTCTTATCGGCCATGTCTATCGTCTCATCACCTTCGAGGATGTATTGAAGGAATTTGCTGCAAAGAAATGCGTGAAACTGGGGAAATTGCTTAAAGAGGGAGGAGCACTCTCGATTGGGATGAAGATAAACGACACAAATTCTGCTTCAAATCCAAATTCAAATTCTAAATCCCAAAATTACATGAAGGCGGAGCAGGAGGGGGGCCGTCGCCTGGAAAACAGAGACGCCGGCAGCCGCAGTGGTGGAAGAGGCGGAGGAGGACCCAGAGGCATGGGTAGGCATTACGGTGGTGGGGGTCAATGGCGGCCAGCCTTACAGAGCATTGCAGAAGTTGGAATTAATTGAAGAATTAAAAAGAAA ATGGGGAACTGCCAGGCGGCGGAGGCGGCGACGGTGGTCATTCAACACCCTGGGATTAATCCCAAGATCGAGAGGATTTATTGGTCCGTAAGTGCACACCAGATCATGAACTCCAACCCTGGCCATTACGTTGCGCTGGTTGTTACCTCGTCCACTTTGAAGACCCAAAATGGTACCCCGATCAAGCAGCTCAAACTCCTCCGCCCCGATGACACGCTTCTTATCGGCCATGTCTATCGTCTCATCACCTTCGAGGATGTATTGAAGGAATTTGCTGCAAAGAAATGCGTGAAACTGGGGAAATTGCTTAAAGAGGGAGGAGCACTCTCGATTGGGATGAAGATAAACGACACAAATTCTGCTTCAAATCCAAATTCAAATTCTAAATCCCAAAATTACATGAAGGCGGAGCAGGAGGGGGGCCGTCGCCTGGAAAACAGAGACGCCGGCAGCCGCAGTGGTGGAAGAGGCGGAGGAGGACCCAGAGGCATGGGTAGGCATTACGGTGGTGGGGGTCAATGGCGGCCAGCCTTACAGAGCATTGCAGAAGTTGGAATTAATTGA
BLAST of CmoCh07G006500 vs. TrEMBL
Match: A0A0A0KLJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495750 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 1.8e-79 Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TrEMBL
Match: B9HG01_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s14870g PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 3.8e-58 Identity = 131/189 (69.31%), Postives = 146/189 (77.25%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TrEMBL
Match: A0A0B0NA22_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02103 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.4e-57 Identity = 129/189 (68.25%), Postives = 148/189 (78.31%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TrEMBL
Match: A0A0D2QML8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G031100 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.4e-57 Identity = 129/189 (68.25%), Postives = 148/189 (78.31%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TrEMBL
Match: A0A0D2MIR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G031100 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.6e-56 Identity = 123/186 (66.13%), Postives = 144/186 (77.42%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TAIR10
Match: AT5G67620.1 (AT5G67620.1 unknown protein) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-48 Identity = 112/197 (56.85%), Postives = 126/197 (63.96%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TAIR10
Match: AT5G50090.1 (AT5G50090.1 unknown protein) HSP 1 Score: 101.3 bits (251), Expect = 6.7e-22 Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TAIR10
Match: AT5G62900.1 (AT5G62900.1 unknown protein) HSP 1 Score: 95.5 bits (236), Expect = 3.7e-20 Identity = 72/184 (39.13%), Postives = 101/184 (54.89%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TAIR10
Match: AT1G60010.1 (AT1G60010.1 unknown protein) HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17 Identity = 67/195 (34.36%), Postives = 95/195 (48.72%), Query Frame = 1
BLAST of CmoCh07G006500 vs. TAIR10
Match: AT1G10530.1 (AT1G10530.1 unknown protein) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16 Identity = 50/115 (43.48%), Postives = 66/115 (57.39%), Query Frame = 1
BLAST of CmoCh07G006500 vs. NCBI nr
Match: gi|659079727|ref|XP_008440410.1| (PREDICTED: uncharacterized protein LOC103484864 isoform X2 [Cucumis melo]) HSP 1 Score: 305.4 bits (781), Expect = 6.6e-80 Identity = 159/187 (85.03%), Postives = 169/187 (90.37%), Query Frame = 1
BLAST of CmoCh07G006500 vs. NCBI nr
Match: gi|449448206|ref|XP_004141857.1| (PREDICTED: uncharacterized protein LOC101222947 [Cucumis sativus]) HSP 1 Score: 303.5 bits (776), Expect = 2.5e-79 Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 1
BLAST of CmoCh07G006500 vs. NCBI nr
Match: gi|659079725|ref|XP_008440409.1| (PREDICTED: uncharacterized protein LOC103484864 isoform X1 [Cucumis melo]) HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78 Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 1
BLAST of CmoCh07G006500 vs. NCBI nr
Match: gi|1000953439|ref|XP_002525287.2| (PREDICTED: uncharacterized protein LOC8283380 [Ricinus communis]) HSP 1 Score: 233.4 bits (594), Expect = 3.2e-58 Identity = 133/200 (66.50%), Postives = 153/200 (76.50%), Query Frame = 1
BLAST of CmoCh07G006500 vs. NCBI nr
Match: gi|224095029|ref|XP_002310335.1| (hypothetical protein POPTR_0007s14870g [Populus trichocarpa]) HSP 1 Score: 232.6 bits (592), Expect = 5.5e-58 Identity = 131/189 (69.31%), Postives = 146/189 (77.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |