CmoCh07G006500.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G006500.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF4228 domain protein
Location	Cmo_Chr07 : 2931565 .. 2933103 (+)
Sequence length	982

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTGCGCAGATAGAGCTTTCAGTTCGTACTCCAATATTACGTTCCTTCCGATCCCATTATAAGTACCCATTACCCAACTCACCAACTTCATTCCATTCTCCCCTGTTTTTTCTCTTTCCCTCAATTTTAAATTAATAAACCTTCTGGAATTCATTTGCTCTCCCGCATTTACCCTCTTCGCTGATCTGGAAAACGTCACGTCCTTTGTTCAGAACCGAGATTCTTAACGTGCGTCGTGGAGAGGGTAATCAAGGATACCGTCAGTCCTCACACTTCTTTACTCAATTTTTCATAATCTCCTTCCTCTCCTCTGTCTCATACCCTAAAACCACTGCTCTTCTCCTTAAAAAACTACACCACTTGGAATTCTTTACTTGGGAGATTAGATAGCTGCAAACAGAATGGGGAACTGCCAGGCGGCGGAGGCGGCGACGGTGGTCATTCAACACCCTGGGATTAATCCCAAGATCGAGAGGATTTATTGGTCCGTAAGTGCACACCAGATCATGAACTCCAACCCTGGCCATTACGTTGCGCTGGTTGTTACCTCGTCCACTTTGAAGACCCAAAATGGTACCCCGATCAAGCAGCTCAAACTCCTCCGCCCCGATGACACGCTTCTTATCGGCCATGTCTATCGTCTCATCACCTTCGAGGGTAATTCTTTATATTTCTCAAATATTTATTTTAAAAAAAACTATATTTTAGTTGCGTTTGTTCTTGTTTCTTTTGGTTCAGATGTATTGAAGGAATTTGCTGCAAAGAAATGCGTGAAACTGGGGAAATTGCTTAAAGAGGGAGGAGCACTCTCGATTGGGATGAAGATAAACGACACAAATTCTGCTTCAAATCCAAATTCAAATTCTAAATCCCAAAATTACATGAAGGTAATCGAATACCCATTAACCTTAATCATGCTCCAAATCCCCAAAAGTTGATTTATATAATTTCTTTTTCATGATTACACTCTGATTAAAACCAAAAATCAAAAGAAAAAAAAAAAATAACAAAAAGCTGTTTTTCTGTATAAAGAAGTATCTGAAAATGGTTTGAAATTTAAGGCCACGGATATCAAGGGAAATGCCTTTTATGGGCCACTTCAAGAACCTTGTCAGAAATTTAAGTAAGCTGTAGAGCTGTAGAGTGCAGAGGTATTCAATTATATATCATCAAGTCAAACGTATATAGTTTGGTAATGGGGTTTTGCCTGTATTTTAAATATATTTATTGGCTCGCCTTCGCTGTCTCCTTTGGTCCATATCAATATCTTCAGGAAAACGTGAACATTATTCCCACTTCTTCGTCTCATTGGGGGTCAAATCCAAACGTGATGCTGAAATAATTATTTTGAATATATGGTCAGGCGGAGCAGGAGGGGGGCCGTCGCCTGGAAAACAGAGACGCCGGCAGCCGCAGTGGTGGAAGAGGCGGAGGAGGACCCAGAGGCATGGGTAGGCATTACGGTGGTGGGGGTCAATGGCGGCCAGCCTTACAGAGCATTGCAGAAGTTGGAATTAATTGAAGAATTAAAAAGAAA

mRNA sequence

GTTTTGCGCAGATAGAGCTTTCAGTTCGTACTCCAATATTACGTTCCTTCCGATCCCATTATAAGTACCCATTACCCAACTCACCAACTTCATTCCATTCTCCCCTGTTTTTTCTCTTTCCCTCAATTTTAAATTAATAAACCTTCTGGAATTCATTTGCTCTCCCGCATTTACCCTCTTCGCTGATCTGGAAAACGTCACGTCCTTTGTTCAGAACCGAGATTCTTAACGTGCGTCGTGGAGAGGGTAATCAAGGATACCGTCAGTCCTCACACTTCTTTACTCAATTTTTCATAATCTCCTTCCTCTCCTCTGTCTCATACCCTAAAACCACTGCTCTTCTCCTTAAAAAACTACACCACTTGGAATTCTTTACTTGGGAGATTAGATAGCTGCAAACAGAATGGGGAACTGCCAGGCGGCGGAGGCGGCGACGGTGGTCATTCAACACCCTGGGATTAATCCCAAGATCGAGAGGATTTATTGGTCCGTAAGTGCACACCAGATCATGAACTCCAACCCTGGCCATTACGTTGCGCTGGTTGTTACCTCGTCCACTTTGAAGACCCAAAATGGTACCCCGATCAAGCAGCTCAAACTCCTCCGCCCCGATGACACGCTTCTTATCGGCCATGTCTATCGTCTCATCACCTTCGAGGATGTATTGAAGGAATTTGCTGCAAAGAAATGCGTGAAACTGGGGAAATTGCTTAAAGAGGGAGGAGCACTCTCGATTGGGATGAAGATAAACGACACAAATTCTGCTTCAAATCCAAATTCAAATTCTAAATCCCAAAATTACATGAAGGCGGAGCAGGAGGGGGGCCGTCGCCTGGAAAACAGAGACGCCGGCAGCCGCAGTGGTGGAAGAGGCGGAGGAGGACCCAGAGGCATGGGTAGGCATTACGGTGGTGGGGGTCAATGGCGGCCAGCCTTACAGAGCATTGCAGAAGTTGGAATTAATTGAAGAATTAAAAAGAAA

Coding sequence (CDS)

ATGGGGAACTGCCAGGCGGCGGAGGCGGCGACGGTGGTCATTCAACACCCTGGGATTAATCCCAAGATCGAGAGGATTTATTGGTCCGTAAGTGCACACCAGATCATGAACTCCAACCCTGGCCATTACGTTGCGCTGGTTGTTACCTCGTCCACTTTGAAGACCCAAAATGGTACCCCGATCAAGCAGCTCAAACTCCTCCGCCCCGATGACACGCTTCTTATCGGCCATGTCTATCGTCTCATCACCTTCGAGGATGTATTGAAGGAATTTGCTGCAAAGAAATGCGTGAAACTGGGGAAATTGCTTAAAGAGGGAGGAGCACTCTCGATTGGGATGAAGATAAACGACACAAATTCTGCTTCAAATCCAAATTCAAATTCTAAATCCCAAAATTACATGAAGGCGGAGCAGGAGGGGGGCCGTCGCCTGGAAAACAGAGACGCCGGCAGCCGCAGTGGTGGAAGAGGCGGAGGAGGACCCAGAGGCATGGGTAGGCATTACGGTGGTGGGGGTCAATGGCGGCCAGCCTTACAGAGCATTGCAGAAGTTGGAATTAATTGA

Homology

[Close]

BLAST of CmoCh07G006500.1 vs. TrEMBL
Match: A0A0A0KLJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495750 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-79
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSST+K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMKI  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180
            SNPN+NSKSQNYMK EQ+   RLEN +AGS  GGR   G RGMGRHYGGG QWRPALQS
Sbjct: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180

Query: 181 IAEVGIN 188
           IAE+GIN
Sbjct: 181 IAEIGIN 183

[Close]

BLAST of CmoCh07G006500.1 vs. TrEMBL
Match: B9HG01_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s14870g PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.8e-58
Identity = 131/189 (69.31%), Postives = 146/189 (77.25%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG   KIERIYWSVSAH+IMNSNPGHYVALVVTS T +T+NG P
Sbjct: 1   MGNCQAAEAATVVIQHPG--NKIERIYWSVSAHEIMNSNPGHYVALVVTSPTTRTENGLP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           +KQLKLLRPDDTLLIGHVYRL++FEDVLKEFAAKKCVKLGKLLKE   L   MK  +++ 
Sbjct: 61  LKQLKLLRPDDTLLIGHVYRLVSFEDVLKEFAAKKCVKLGKLLKESRGLGGEMKRKNSSD 120

Query: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHY----GGGGQWRP 180
             NP SNS + N +K EQE  R   N  + S S  RGG    G+G HY    GGGGQW+P
Sbjct: 121 LLNPISNSDNSNSIKVEQEVNRLGSNGGSTSSSSSRGG----GVGMHYGVGAGGGGQWKP 180

Query: 181 ALQSIAEVG 186
           ALQSI+E G
Sbjct: 181 ALQSISETG 183

[Close]

BLAST of CmoCh07G006500.1 vs. TrEMBL
Match: A0A0B0NA22_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02103 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-57
Identity = 129/189 (68.25%), Postives = 148/189 (78.31%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG   KIERIYWSVSA++IM SNPGHYVALVVTS T+K +NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPG--NKIERIYWSVSANEIMGSNPGHYVALVVTSPTMKNENGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           +KQLKLL+PDDTLLIG VYRL++FEDVLKEFAAKKCVKLGKLLKE G L +GM++     
Sbjct: 61  VKQLKLLKPDDTLLIGQVYRLVSFEDVLKEFAAKKCVKLGKLLKENGGLGLGMELKKKKK 120

Query: 121 ---ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPA 180
               +   S S + + +K EQE  R      +G   GG GGGG R +GRH+GGGGQWRPA
Sbjct: 121 DLPRTKLGSESGNCSGVKVEQEVNR---VGTSGGGGGGGGGGGSRYIGRHHGGGGQWRPA 180

Query: 181 LQSIAEVGI 187
           LQSIAE+GI
Sbjct: 181 LQSIAEIGI 184

[Close]

BLAST of CmoCh07G006500.1 vs. TrEMBL
Match: A0A0D2QML8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G031100 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-57
Identity = 129/189 (68.25%), Postives = 148/189 (78.31%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG   KIERIYWSVSA++IM SNPGHYVALVVTS T+K +NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPG--NKIERIYWSVSANEIMGSNPGHYVALVVTSPTMKNENGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           +KQLKLL+PDDTLLIG VYRL++FEDVLKEFAAKKCVKLGKLLKE G L +GM++    +
Sbjct: 61  VKQLKLLKPDDTLLIGQVYRLVSFEDVLKEFAAKKCVKLGKLLKENGGLGLGMELKKKRT 120

Query: 121 ---ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPA 180
               +   S S + + +K EQE  R          SGG GGGG R +GRH+GGGGQWRPA
Sbjct: 121 DLPRTKLGSESGNCSGVKVEQEVNR-------VGTSGGGGGGGSRYIGRHHGGGGQWRPA 180

Query: 181 LQSIAEVGI 187
           LQSIAE+GI
Sbjct: 181 LQSIAEIGI 180

[Close]

BLAST of CmoCh07G006500.1 vs. TrEMBL
Match: A0A0D2MIR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G031100 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-56
Identity = 123/186 (66.13%), Postives = 144/186 (77.42%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG   KIERIYWSVSA++IM SNPGHYVALVVTS T+K +NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPG--NKIERIYWSVSANEIMGSNPGHYVALVVTSPTMKNENGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           +KQLKLL+PDDTLLIG VYRL++FEDVLKEFAAKKCVKLGKLLKE G L +GM++    +
Sbjct: 61  VKQLKLLKPDDTLLIGQVYRLVSFEDVLKEFAAKKCVKLGKLLKENGGLGLGMELKKKRT 120

Query: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180
                     +  + +E      ++  +    SGG GGGG R +GRH+GGGGQWRPALQS
Sbjct: 121 -------DLPRTKLGSESGNCSGVKEVNRVGTSGGGGGGGSRYIGRHHGGGGQWRPALQS 177

Query: 181 IAEVGI 187
           IAE+GI
Sbjct: 181 IAEIGI 177

[Close]

BLAST of CmoCh07G006500.1 vs. TAIR10
Match: AT5G67620.1 (AT5G67620.1 unknown protein)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-48
Identity = 112/197 (56.85%), Postives = 126/197 (63.96%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATV+I HP  N K+ERIYWSV+A  IM SNPGHYVA+VVTS T+K + G P
Sbjct: 1   MGNCQAAEAATVLIHHPAEN-KVERIYWSVTASDIMKSNPGHYVAVVVTSPTMKNEKGLP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMK------ 120
           +KQLKLLRPDDTLLIGHVYRL++FE+VL EFA KKCVKLGKLLKEGG L +  K      
Sbjct: 61  LKQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLLKEGGGLDLTKKKTKHRK 120

Query: 121 ------INDTNSASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHY 180
                     N  S+PN N    +   A + GG     R   S  GGRGGGG        
Sbjct: 121 KKLDQETGKVNPNSDPNPNQDGADNAVAGENGGDGFMRR---SHGGGRGGGG-------- 180

Query: 181 GGGGQWRPALQSIAEVG 186
                WRPAL SI E G
Sbjct: 181 -----WRPALHSIPEFG 180

[Close]

BLAST of CmoCh07G006500.1 vs. TAIR10
Match: AT5G50090.1 (AT5G50090.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 6.7e-22
Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQN--- 60
           MGNCQA + A VVIQHP  N K E++   VSA  +M  NPGH V+L+++++ L + +   
Sbjct: 1   MGNCQAVDTARVVIQHP--NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGH 60

Query: 61  GTPIK--QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKI 120
           G P++  ++KLLRP DTL++GHVYRLIT ++V+K   AKKC KL K  K         K+
Sbjct: 61  GGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDD-----KL 120

Query: 121 NDTNSASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWR 180
               + ++   +++ Q  MK +++   R+      SRS                    W+
Sbjct: 121 EMVKAINSTKLDNEDQLQMKKQEKERSRI------SRS--------------------WQ 157

Query: 181 PALQSIAEVG 186
           P+LQSI+E G
Sbjct: 181 PSLQSISEGG 157

[Close]

BLAST of CmoCh07G006500.1 vs. TAIR10
Match: AT5G62900.1 (AT5G62900.1 unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.7e-20
Identity = 72/184 (39.13%), Postives = 101/184 (54.89%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAAT VIQ P  + K  R Y +V+A +++ S+PGH+VAL++ SS +       
Sbjct: 1   MGNCQAAEAATTVIQQP--DGKSVRFYCTVNASEVIKSHPGHHVALLL-SSAVPHGGSLR 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIG-MKINDTN 120
           + ++KLLRP D LL+GHVYRLI+ E+V+K   AKK    GK+ K  G  S+   +IN   
Sbjct: 61  VTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKS---GKMKKIHGEFSVAEEEINPLT 120

Query: 121 SASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQ 180
             S   S+  +Q          RR+  +  G  + G      R           W+P+LQ
Sbjct: 121 LRSESASDKDTQ----------RRIHEKQRGMMNTGGATNKVRA----------WQPSLQ 158

Query: 181 SIAE 184
           SI+E
Sbjct: 181 SISE 158

[Close]

BLAST of CmoCh07G006500.1 vs. TAIR10
Match: AT1G60010.1 (AT1G60010.1 unknown protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17
Identity = 67/195 (34.36%), Postives = 95/195 (48.72%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVT-------SSTL 60
           MGNCQA +AA +V+QHP  + KI+R Y  VS  +IM   PGHYV+L++        ++T 
Sbjct: 1   MGNCQAVDAAALVLQHP--DGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTT 60

Query: 61  KTQNGTPIK-----QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGA 120
            T + +  K     ++KLLRP + L++GH YRLIT ++V+K   AKK  K  K   E   
Sbjct: 61  TTDDKSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKKHQSE--- 120

Query: 121 LSIGMKINDTNSASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHY 180
                        S       S+  +  E +  + LE +D   RS        R      
Sbjct: 121 ------------TSKEKKKPSSEKKIDEESDKNQNLETKDEKQRSVLTNSASSRSK---- 170

Query: 181 GGGGQWRPALQSIAE 184
                WRP+LQSI+E
Sbjct: 181 ----TWRPSLQSISE 170

[Close]

BLAST of CmoCh07G006500.1 vs. TAIR10
Match: AT1G10530.1 (AT1G10530.1 unknown protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16
Identity = 50/115 (43.48%), Postives = 66/115 (57.39%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLK------ 60
           MGNCQA  AA +V+QHPG    I+R Y SVS  ++M   PGHYV+L++  S  +      
Sbjct: 1   MGNCQAVNAAVLVLQHPG--GIIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKNIPA 60

Query: 61  TQNGTPIKQLK--------LLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGK 102
           T+ G   KQ K        LLRP + L++GH YRLIT ++V+K    KK  K  K
Sbjct: 61  TEKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKK 113

[Close]

BLAST of CmoCh07G006500.1 vs. NCBI nr
Match: gi|659079727|ref|XP_008440410.1| (PREDICTED: uncharacterized protein LOC103484864 isoform X2 [Cucumis melo])

HSP 1 Score: 305.4 bits (781), Expect = 6.6e-80
Identity = 159/187 (85.03%), Postives = 169/187 (90.37%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSSTLK++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMKI  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180
            SNPN+NSKSQNYMK EQ    RLEN DAGS  GGR   G RGMGRHYGGG QWRPALQS
Sbjct: 121 GSNPNANSKSQNYMKPEQNAEHRLENSDAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180

Query: 181 IAEVGIN 188
           IAE+GIN
Sbjct: 181 IAEIGIN 183

[Close]

BLAST of CmoCh07G006500.1 vs. NCBI nr
Match: gi|449448206|ref|XP_004141857.1| (PREDICTED: uncharacterized protein LOC101222947 [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 2.5e-79
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSST+K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMKI  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180
            SNPN+NSKSQNYMK EQ+   RLEN +AGS  GGR   G RGMGRHYGGG QWRPALQS
Sbjct: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180

Query: 181 IAEVGIN 188
           IAE+GIN
Sbjct: 181 IAEIGIN 183

[Close]

BLAST of CmoCh07G006500.1 vs. NCBI nr
Match: gi|659079725|ref|XP_008440409.1| (PREDICTED: uncharacterized protein LOC103484864 isoform X1 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78
Identity = 159/189 (84.13%), Postives = 170/189 (89.95%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSSTLK++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMKI  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNSNSKSQNYMKA--EQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPAL 180
            SNPN+NSKSQNYMK+  EQ    RLEN DAGS  GGR   G RGMGRHYGGG QWRPAL
Sbjct: 121 GSNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGR---GQRGMGRHYGGGSQWRPAL 180

Query: 181 QSIAEVGIN 188
           QSIAE+GIN
Sbjct: 181 QSIAEIGIN 185

[Close]

BLAST of CmoCh07G006500.1 vs. NCBI nr
Match: gi|1000953439|ref|XP_002525287.2| (PREDICTED: uncharacterized protein LOC8283380 [Ricinus communis])

HSP 1 Score: 233.4 bits (594), Expect = 3.2e-58
Identity = 133/200 (66.50%), Postives = 153/200 (76.50%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG   KIERIYWSVSAHQIMNSNPGHYVA+VV S T KT+NG P
Sbjct: 1   MGNCQAAEAATVVIQHPG--NKIERIYWSVSAHQIMNSNPGHYVAMVVPSPTTKTENGLP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           +KQLKLLRPDDTLLIG VYRLI+FEDVLKEFA+KKCVKLGKLLK+ G L +G+++  +  
Sbjct: 61  VKQLKLLRPDDTLLIGQVYRLISFEDVLKEFASKKCVKLGKLLKQRGGLGVGVEMKRSKC 120

Query: 121 AS------NPNSNSKSQNY---MKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHY--- 180
           +S      NPNS SKS+N+   +K EQE  R   N  + S SG RG     G+GRHY   
Sbjct: 121 SSALTLNPNPNSVSKSENFSSHVKVEQEVNRLASNGGSTSSSGSRG-----GVGRHYGGV 180

Query: 181 ---GGGGQWRPALQSIAEVG 186
              GGGGQW+PALQSI+E+G
Sbjct: 181 GGGGGGGQWKPALQSISEIG 193

[Close]

BLAST of CmoCh07G006500.1 vs. NCBI nr
Match: gi|224095029|ref|XP_002310335.1| (hypothetical protein POPTR_0007s14870g [Populus trichocarpa])

HSP 1 Score: 232.6 bits (592), Expect = 5.5e-58
Identity = 131/189 (69.31%), Postives = 146/189 (77.25%), Query Frame = 1


Query: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60
           MGNCQAAEAATVVIQHPG   KIERIYWSVSAH+IMNSNPGHYVALVVTS T +T+NG P
Sbjct: 1   MGNCQAAEAATVVIQHPG--NKIERIYWSVSAHEIMNSNPGHYVALVVTSPTTRTENGLP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120
           +KQLKLLRPDDTLLIGHVYRL++FEDVLKEFAAKKCVKLGKLLKE   L   MK  +++ 
Sbjct: 61  LKQLKLLRPDDTLLIGHVYRLVSFEDVLKEFAAKKCVKLGKLLKESRGLGGEMKRKNSSD 120

Query: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHY----GGGGQWRP 180
             NP SNS + N +K EQE  R   N  + S S  RGG    G+G HY    GGGGQW+P
Sbjct: 121 LLNPISNSDNSNSIKVEQEVNRLGSNGGSTSSSSSRGG----GVGMHYGVGAGGGGQWKP 180

Query: 181 ALQSIAEVG 186
           ALQSI+E G
Sbjct: 181 ALQSISETG 183

The following BLAST results are available for this feature:

BLAST of CmoCh07G006500.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh07G006500.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLJ3_CUCSA	1.8e-79	83.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495750 PE=4 SV=1	[more]
B9HG01_POPTR	3.8e-58	69.31	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s14870g PE=4 SV=1	[more]
A0A0B0NA22_GOSAR	1.4e-57	68.25	Uncharacterized protein OS=Gossypium arboreum GN=F383_02103 PE=4 SV=1	[more]
A0A0D2QML8_GOSRA	1.4e-57	68.25	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G031100 PE=4 SV=1	[more]
A0A0D2MIR0_GOSRA	3.6e-56	66.13	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G031100 PE=4 SV=1	[more]

BLAST of CmoCh07G006500.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67620.1	1.1e-48	56.85	unknown protein	[more]
AT5G50090.1	6.7e-22	37.37	unknown protein	[more]
AT5G62900.1	3.7e-20	39.13	unknown protein	[more]
AT1G60010.1	1.0e-17	34.36	unknown protein	[more]
AT1G10530.1	1.4e-16	43.48	unknown protein	[more]

BLAST of CmoCh07G006500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079727\|ref\|XP_008440410.1\|	6.6e-80	85.03	PREDICTED: uncharacterized protein LOC103484864 isoform X2 [Cucumis melo]	[more]
gi\|449448206\|ref\|XP_004141857.1\|	2.5e-79	83.96	PREDICTED: uncharacterized protein LOC101222947 [Cucumis sativus]	[more]
gi\|659079725\|ref\|XP_008440409.1\|	1.2e-78	84.13	PREDICTED: uncharacterized protein LOC103484864 isoform X1 [Cucumis melo]	[more]
gi\|1000953439\|ref\|XP_002525287.2\|	3.2e-58	66.50	PREDICTED: uncharacterized protein LOC8283380 [Ricinus communis]	[more]
gi\|224095029\|ref\|XP_002310335.1\|	5.5e-58	69.31	hypothetical protein POPTR_0007s14870g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh07G006500	CmoCh07G006500	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006500.1	CmoCh07G006500.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006500.1.exon.3	CmoCh07G006500.1.exon.3	exon
CmoCh07G006500.1.exon.2	CmoCh07G006500.1.exon.2	exon
CmoCh07G006500.1.exon.1	CmoCh07G006500.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006500.1.five_prime_UTR.1	CmoCh07G006500.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006500.1.CDS.1	CmoCh07G006500.1.CDS.1	CDS
CmoCh07G006500.1.CDS.2	CmoCh07G006500.1.CDS.2	CDS
CmoCh07G006500.1.CDS.3	CmoCh07G006500.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006500.1.three_prime_UTR.1	CmoCh07G006500.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..183 score: 1.0
None	No IPR available	PANTHER	PTHR33413	FAMILY NOT NAMED	coord: 1..185 score: 1.5