CsGy6G028470 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G028470
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	DUF4228 domain protein
Location	Chr6 : 27341641 .. 27345145 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACACGTTTCGAGCAGATGGGAGCTTTCAGTTCTTACGTTCCTTCTGAACCATTTTATAAGTACCCATTACCCAACTCACCAACTTCATTCCCTTCTTCTTTACCTTCTCTCTCTCTCTCTCTCAAATTTTCAGAAAAAAATAAAATAAAATCAGAAATTATTTTTCCTTCTTCTTCTTCCTCTGTCTCTGAATTTGTTTCGTATAGTAATTTCTTCTTCTTATTGTTTTGTTGGTGTGCTTTAATCGTTTAAGTGTGTGATCTGGAAAACGTCACGTCCTTTTGTTCAGAATTGAGATTCTTGACGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTCATTTACTCGTGTGTATAGTCTGTGATTAATTAATTTTTATATATATATCTATATCTATATATATATATAGCTTAAGATTAAGCTTCTACTTCAAAAACAATTAAGGCCAACTTCCCCAACGCACGCGACCCACACGCGCACTTGGGATTCTTGAGTTGAAGGATTTGGTTTAGAGATAGGGAGGTAATGGGGAACTGTCAGGCGGCGGAGGCAGCGACGGTGGTGATTCAACACCCTGGTAATCAAAAGATCGAGAGGATTTATTGGTCTGTAAGTGCACACGAGATCATGAACTCTAACCCTGGCCATTACGTTGCTCTCCTTATCACTTCCTCTACTATGAAGTCCGAAAATGGAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTCTCATCGGCCACGTCTATCGCCTTATCACTTTCGAAGGTATTTTTCTTTTTCTTTATTTTTAACAATTATATTATACACGCACACACTTACTTTTCTCGCAATGCAACAATAGAACAAGTACATTGGTTGAATAGTTTTTTAATAAATATTCTTAAAGTTGGAAGAAGAAAAACAAAACTTTAGTGCATGTCACAGGCTTTACCCATCTTTTATGCAATCTACACAATATCGGATAAAAATATGTCATACGTACAGTAGGTTTTTTTTCCTAAAGATTTATTTTATCATGTGTAAAAAAAGATGCAGCAATAAGGAAAAAAACTATGCTGCGCCTAATAATTACTCTTAAATTTAAAGGGATGTTCATTACTAAACACAATGATGAATCTGATCATATGATTCGCCTATCTCTATTTTTTTTACCACTCTCGCATATCTTTATCCTTGATATGCCGACCACACAGTTGAATTATACTTAAAAGTAAGCTATTTTGTTAAGAGTTCGAAATATAAATGAATGATTTTATTTTAAACTTATATAAAAATGGTCCTCTCTTTAATATAATATAAGGAGATAGTGAGATGGAACTTCCCAAGTAATATAATATAAGGAGATAGTGAGATCAAACTTATCAGCTTCAAAGTTAAAAGTGTTTTCTGTTATAGTTGAGTTGGACTTATTTAAACAAATAAAACGGTTATTAGAGAGACTGGAGTGGGTTGCTAACTAAATTTAATGTGTGTATTGTGTGCTAAATTGGGAATTTTCTTTCCTCTTTCAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGAAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATAAAGGGCTCAGATTCTGGTTCAAATCCGAATGCTAATTCTAAATCCCAAAATTACATGAAGGTAATCAAATACCCCATAACCCTTAATCATGCTCCAAATCCCAAAAGGGGATTTTTCCTTTTCTTTTCTTAAAAAATCCATTGGTTGGGGGTAAATATCGCGATTTATTGAATTTCGTTTTTCATGATTACACTCTGATTAAAGCCAAGAAATAAAAGAAAAAACAAAAAGTTGTTTTTTCTGAATAAAGAAGCATCTGAAATTGGTTTGAAATTTAAGGCCACAAATATCGAGGGAAAAGGCTTTTTATGGGTCACCTCATGAATCTTGTCAGGAATTGAAGTAGAGCTGTACACACCAGCGGTATTCAATTTTTATATCATCTTCAACTCAGATATATTCACTCAACCCAGTTTTTTTTTTTTTTTTTTCTTTTTCGAAAATGAAAAAAAGTTCAACTTCATTATAAATTAAGGATTAAAAAATAATAATAAATAAAAGGGGAAATTTCTTTTATCAGCTTTCGCAAGCATTCTCTGCATGCTGTCTTATAGATTTAGAAAGGAAGAAAAAAAAAGTTTGCTTAACTTAAAAGTTGAATTAATTATTCAGGGGACCAAATCATAATGGGGTTTGCCTGTATATTGAAACTAACTCATTTTCAATTTGAGTTCCATTTCCCACAGACTTCATCAACAATTTTATATTGAAATCTAGAGGTTTTAACTCTTGAGAACGTTTACAAGTGACCCTCTTTAAAAAAAAAGGACAATGATTGAATACAATTTGTCCATTGAAAAAAGTCAAAATTTCTTGTTATTTTGAAAAACTGGAGTATGCAAAGATATAGGTGCAACACAACCAATCAACACTCTAATACTTTTTCTTTTCAAAACAACACTTTCTAGCTCCTTTCTCCTTTCTCTCTTTTGCTGATATATATATTAAAAAGAAAAAAAATCTAAATAACATGGCCTTTTCTTTGATCATAATCATAAAGTAGAAAGATATTTATTTGCTTGCTCTTTACAAAGTCGACAACCAATATCTTCAAATGAACGTGAACAATCCTACTTTTTGATAATTGGAGTCAAATCAAAAACATTATGCTAAAATAATGATATTTTCTCAGCCGGAGCAGGATGCCGAACACCGCCTCGAAAACAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGACAGAGAGGTATGGGAAGACATTATGGTGGTGGAAGTCAATGGAGGCCAGCCTTACAAAGCATTGCAGAAATTGGAATTAATTGAAAAGGAAAAAAAGGGAAAGGGAAAGGGAAAGGCAATATATGAACAAAAACCAAAACAAAAAAATTGGCCTTTCGCTTTCATGATCTTCAATGAATAATTACTACAAGAAGTTAACGTCAAAATCTCAATCTTTATCTTTTATATATACCTCTTTTTATATTTTTCTATTTATTATTTAGATACGTCTCTTTGTGTATTTGCAGTAGTACTTTTATTACTTCTTTCTATCTAATTTTAAATTAGTGTACGGAACTTCATTAGTTGAGGTGCTTTAGTTTTCTTTTTTAAATGTAAATTATTGGCAATTACTTTAATGATCGTCTGCCTTAATTAACTTCCTTTTATTTCATTTTCAATTAATTGCATCATATGCCATGTTTGATAATGTGTTTAGGCTGATAACTAAGTGGGACGATATATCATACAAAATTGTATTACCAATAATGGTAGATGTTTGGTGTATTATTATTTTCATTAAATGTTTGGTGTATTAATTGCATAAATACAACCGAATTCTATGGTTTAATAAGAAATTTTTTATTTTTCTATTCCACTTGCCTTCTACCATTGTAATAAATTATTGTTAATGTGCAAGATGTTAA

mRNA sequence

TACACGTTTCGAGCAGATGGGAGCTTTCAGTTCTTACGTTCCTTCTGAACCATTTTATAAGTACCCATTACCCAACTCACCAACTTCATTCCCTTCTTCTTTACCTTCTCTCTCTCTCTCTCTCAAATTTTCAGAAAAAAATAAAATAAAATCAGAAATTATTTTTCCTTCTTCTTCTTCCTCTGTCTCTGAATTTGTTTCGTATAGTAATTTCTTCTTCTTATTGTTTTGTTGGTGTGCTTTAATCGTTTAAGTGTGTGATCTGGAAAACGTCACGTCCTTTTGTTCAGAATTGAGATTCTTGACGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTCATTTACTCGTGTGTATAGTCTGTGATTAATTAATTTTTATATATATATCTATATCTATATATATATATAGCTTAAGATTAAGCTTCTACTTCAAAAACAATTAAGGCCAACTTCCCCAACGCACGCGACCCACACGCGCACTTGGGATTCTTGAGTTGAAGGATTTGGTTTAGAGATAGGGAGGTAATGGGGAACTGTCAGGCGGCGGAGGCAGCGACGGTGGTGATTCAACACCCTGGTAATCAAAAGATCGAGAGGATTTATTGGTCTGTAAGTGCACACGAGATCATGAACTCTAACCCTGGCCATTACGTTGCTCTCCTTATCACTTCCTCTACTATGAAGTCCGAAAATGGAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTCTCATCGGCCACGTCTATCGCCTTATCACTTTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGAAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATAAAGGGCTCAGATTCTGGTTCAAATCCGAATGCTAATTCTAAATCCCAAAATTACATGAAGCCGGAGCAGGATGCCGAACACCGCCTCGAAAACAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGACAGAGAGGTATGGGAAGACATTATGGTGGTGGAAGTCAATGGAGGCCAGCCTTACAAAGCATTGCAGAAATTGGAATTAATTGAAAAGGAAAAAAAGGGAAAGGGAAAGGGAAAGGCAATATATGAACAAAAACCAAAACAAAAAAATTGGCCTTTCGCTTTCATGATCTTCAATGAATAATTACTACAAGAAGTTAACGTCAAAATCTCAATCTTTATCTTTTATATATACCTCTTTTTATATTTTTCTATTTATTATTTAGATACGTCTCTTTGTGTATTTGCAGTAGTACTTTTATTACTTCTTTCTATCTAATTTTAAATTAGTGTACGGAACTTCATTAGTTGAGGTGCTTTAGTTTTCTTTTTTAAATGTAAATTATTGGCAATTACTTTAATGATCGTCTGCCTTAATTAACTTCCTTTTATTTCATTTTCAATTAATTGCATCATATGCCATGTTTGATAATGTGTTTAGGCTGATAACTAAGTGGGACGATATATCATACAAAATTGTATTACCAATAATGGTAGATGTTTGGTGTATTATTATTTTCATTAAATGTTTGGTGTATTAATTGCATAAATACAACCGAATTCTATGGTTTAATAAGAAATTTTTTATTTTTCTATTCCACTTGCCTTCTACCATTGTAATAAATTATTGTTAATGTGCAAGATGTTAA

Coding sequence (CDS)

ATGGGGAACTGTCAGGCGGCGGAGGCAGCGACGGTGGTGATTCAACACCCTGGTAATCAAAAGATCGAGAGGATTTATTGGTCTGTAAGTGCACACGAGATCATGAACTCTAACCCTGGCCATTACGTTGCTCTCCTTATCACTTCCTCTACTATGAAGTCCGAAAATGGAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTCTCATCGGCCACGTCTATCGCCTTATCACTTTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGAAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATAAAGGGCTCAGATTCTGGTTCAAATCCGAATGCTAATTCTAAATCCCAAAATTACATGAAGCCGGAGCAGGATGCCGAACACCGCCTCGAAAACAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGACAGAGAGGTATGGGAAGACATTATGGTGGTGGAAGTCAATGGAGGCCAGCCTTACAAAGCATTGCAGAAATTGGAATTAATTGA

Protein sequence

MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSGSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEIGIN

Homology

[Close]

BLAST of CsGy6G028470 vs. NCBI nr
Match: XP_004141857.1 (PREDICTED: uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical protein Csa_6G495750 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAEI 180
           XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAEI
Sbjct: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAEI 180

Query: 181 GIN 184
           GIN
Sbjct: 181 GIN 183

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BLAST of CsGy6G028470 vs. NCBI nr
Match: XP_016899236.1 (PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 2.2e-84
Identity = 165/185 (89.19%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSST+KSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSD  
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 XXXXXXXXXXXYMK--PEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIA 180
                      YMK  PEQ+AEHRLENS+AGSS  GRGQRGMGRHYGGGSQWRPALQSIA
Sbjct: 121 SNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGRGQRGMGRHYGGGSQWRPALQSIA 180

Query: 181 EIGIN 184
           EIGIN
Sbjct: 181 EIGIN 185

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BLAST of CsGy6G028470 vs. NCBI nr
Match: XP_022963138.1 (uncharacterized protein LOC111463436 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70
Identity = 144/187 (77.01%), Postives = 156/187 (83.42%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSST+K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDX 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMKI  ++ 
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120

Query: 121 XXXXXXXXXXXXYMKPEQDAEHRLENSNAGS---SXXGRGQRGMGRHYGGGSQWRPALQS 180
                       YMK EQ+   RLEN +AGS    XX    RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGXXXXXXPRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIGIN 184
           IAE+GIN
Sbjct: 181 IAEVGIN 187

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BLAST of CsGy6G028470 vs. NCBI nr
Match: XP_022132546.1 (uncharacterized protein LOC111005379 [Momordica charantia])

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-70
Identity = 140/185 (75.68%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATV+I HPGN KI+RIYWSVSAHEIMN+NPGHYVAL++TSST+KS+ G P+
Sbjct: 1   MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPL 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           K LKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMK+K SD  
Sbjct: 61  KHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKVKDSDSA 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSS--XXGRGQRGMGRHYGGGSQWRPALQSIA 180
                        KPEQ+A  R E+S+AGSS    G G RGMGRHYGGG QWRPALQSIA
Sbjct: 121 PNPNSSEDC---TKPEQEAGRRPESSDAGSSGGVRGGGHRGMGRHYGGGGQWRPALQSIA 180

Query: 181 EIGIN 184
           E+GIN
Sbjct: 181 EVGIN 182

[Close]

BLAST of CsGy6G028470 vs. NCBI nr
Match: XP_022950406.1 (uncharacterized protein LOC111453516 [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60
Identity = 134/183 (73.22%), Postives = 140/183 (76.50%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVI HPGN KIERIYWSVSAHE+MNSNPGHYVALL+TSST  S+NG PI
Sbjct: 1   MGNCQAAEAATVVIHHPGNHKIERIYWSVSAHEVMNSNPGHYVALLLTSSTFNSQNGNPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTLLIGHVYRLI+FEDVLKEFAAKKCVKLGKLL+EGGALSVGMKIK SD  
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLISFEDVLKEFAAKKCVKLGKLLREGGALSVGMKIKPSD-- 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAEI 180
                  XXXX                    XX      MG+HYGGG QWRPALQSIAE 
Sbjct: 121 -----SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGKHYGGGCQWRPALQSIAEF 176

Query: 181 GIN 184
           GIN
Sbjct: 181 GIN 176

[Close]

BLAST of CsGy6G028470 vs. TAIR10
Match: AT5G67620.1 (unknown protein)

HSP 1 Score: 191.4 bits (485), Expect = 4.8e-49
Identity = 102/184 (55.43%), Postives = 121/184 (65.76%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATV+I HP   K+ERIYWSV+A +IM SNPGHYVA+++TS TMK+E G P+
Sbjct: 1   MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTSPTMKNEKGLPL 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTLLIGHVYRL++FE+VL EFA KKCVKLGKLLKEGG L +  K       
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLLKEGGGLDLTKK----KTK 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYG---GGSQWRPALQSI 180
                       + P  D     + ++   +    G   M R +G   GG  WRPAL SI
Sbjct: 121 HRKKKLDQETGKVNPNSDPNPNQDGADNAVAGENGGDGFMRRSHGGGRGGGGWRPALHSI 180

Query: 181 AEIG 182
            E G
Sbjct: 181 PEFG 180

[Close]

BLAST of CsGy6G028470 vs. TAIR10
Match: AT5G62900.1 (unknown protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 69/179 (38.55%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAAT VIQ P  + + R Y +V+A E++ S+PGH+VALL+ SS +       +
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSV-RFYCTVNASEVIKSHPGHHVALLL-SSAVPHGGSLRV 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
            ++KLLRP D LL+GHVYRLI+ E+V+K   AKK    GK+ K  G  SV  +       
Sbjct: 61  TRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKS---GKMKKIHGEFSVAEE------- 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAE 180
                          ++D + R+           RG    G        W+P+LQSI+E
Sbjct: 121 --EINPLTLRSESASDKDTQRRIHEKQ-------RGMMNTGGATNKVRAWQPSLQSISE 158

[Close]

BLAST of CsGy6G028470 vs. TAIR10
Match: AT5G50090.1 (unknown protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22
Identity = 72/186 (38.71%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITS---STMKSENG 60
           MGNCQA + A VVIQHP N K E++   VSA  +M  NPGH V+LLI++   S+  S +G
Sbjct: 1   MGNCQAVDTARVVIQHP-NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHG 60

Query: 61  TPIK--QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIK 120
            P++  ++KLLRP DTL++GHVYRLIT ++V+K   AKKC KL K            + K
Sbjct: 61  GPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKK------------ESK 120

Query: 121 GSDXXXXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQ 180
           GSD               K + + + +++      S   R              W+P+LQ
Sbjct: 121 GSDDKLEMVKAINS---TKLDNEDQLQMKKQEKERSRISR-------------SWQPSLQ 157

Query: 181 SIAEIG 182
           SI+E G
Sbjct: 181 SISEGG 157

[Close]

BLAST of CsGy6G028470 vs. TAIR10
Match: AT1G60010.1 (unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-18
Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLI-----------TS 60
           MGNCQA +AA +V+QHP + KI+R Y  VS  EIM   PGHYV+L+I           T+
Sbjct: 1   MGNCQAVDAAALVLQHP-DGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTT 60

Query: 61  STMKSENG-TPIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGK 101
           +  KSE       ++KLLRP + L++GH YRLIT ++V+K   AKK  K  K
Sbjct: 61  TDDKSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKK 111

[Close]

BLAST of CsGy6G028470 vs. TAIR10
Match: AT1G10530.1 (unknown protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17
Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSEN---- 60
           MGNCQA  AA +V+QHPG   I+R Y SVS  E+M   PGHYV+L+I  S  + +N    
Sbjct: 1   MGNCQAVNAAVLVLQHPGG-IIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKNIPAT 60

Query: 61  --GTPIKQLK--------LLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGK 101
             G   KQ K        LLRP + L++GH YRLIT ++V+K    KK  K  K
Sbjct: 61  EKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKK 113

[Close]

BLAST of CsGy6G028470 vs. TrEMBL
Match: tr|A0A0A0KLJ3|A0A0A0KLJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.4e-87
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAEI 180
           XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAEI
Sbjct: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIAEI 180

Query: 181 GIN 184
           GIN
Sbjct: 181 GIN 183

[Close]

BLAST of CsGy6G028470 vs. TrEMBL
Match: tr|A0A1S4DTC0|A0A1S4DTC0_CUCME (uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.5e-84
Identity = 165/185 (89.19%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSST+KSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSD  
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 XXXXXXXXXXXYMK--PEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIA 180
                      YMK  PEQ+AEHRLENS+AGSS  GRGQRGMGRHYGGGSQWRPALQSIA
Sbjct: 121 SNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGRGQRGMGRHYGGGSQWRPALQSIA 180

Query: 181 EIGIN 184
           EIGIN
Sbjct: 181 EIGIN 185

[Close]

BLAST of CsGy6G028470 vs. TrEMBL
Match: tr|A0A2I4FVT5|A0A2I4FVT5_9ROSI (uncharacterized protein LOC109002449 OS=Juglans regia OX=51240 GN=LOC109002449 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.9e-58
Identity = 126/183 (68.85%), Postives = 139/183 (75.96%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGN KIER+YWSVSAHE+M SNPGHYVALL+TS T KS+NGTP+
Sbjct: 1   MGNCQAAEAATVVIQHPGN-KIERVYWSVSAHEVMTSNPGHYVALLVTSPTAKSDNGTPL 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEG--GALSVGMKIKGSD 120
           KQLKLLRPDDTLLIGHVYRLI+FEDVLKEFAAKKCVKLGKLL+ G  G  ++  +  GSD
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLISFEDVLKEFAAKKCVKLGKLLERGGFGVETMRKESGGSD 120

Query: 121 XXXXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHYGGGSQWRPALQSIA 180
                         +K EQ   HRL  SN GS       RG+GR YGGG QWRPAL SIA
Sbjct: 121 PKSKFDNSSS----VKMEQQEVHRL-GSNGGSDSSSSSMRGVGRLYGGGGQWRPALHSIA 177

Query: 181 EIG 182
           E+G
Sbjct: 181 EVG 177

[Close]

BLAST of CsGy6G028470 vs. TrEMBL
Match: tr|A0A0L9TPC2|A0A0L9TPC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g198400 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-52
Identity = 115/182 (63.19%), Postives = 139/182 (76.37%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGN K+ERIYWS+SAH++M+SNPGHYVAL++ S T+KS+NGTP+
Sbjct: 1   MGNCQAAEAATVVIQHPGN-KVERIYWSLSAHQVMDSNPGHYVALVVPSPTLKSDNGTPM 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTL IG VYRLI+FEDVLKEFA+KKC KLGKLLKE G   V MK + +   
Sbjct: 61  KQLKLLRPDDTLHIGQVYRLISFEDVLKEFASKKCGKLGKLLKETGGHGVQMKHRDNRAS 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHY-GGGSQWRPALQSIAE 180
                        K EQ+ + R+E++ + SS      +G+GRH+ G G QW+PALQSIAE
Sbjct: 121 NPSLTSKNEYSSSKVEQEIQ-RMESNGSSSS----NNKGVGRHFVGSGGQWKPALQSIAE 176

Query: 181 IG 182
           IG
Sbjct: 181 IG 176

[Close]

BLAST of CsGy6G028470 vs. TrEMBL
Match: tr|A0A0S3R5C4|A0A0S3R5C4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G360200 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-52
Identity = 115/182 (63.19%), Postives = 139/182 (76.37%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGN K+ERIYWS+SAH++M+SNPGHYVAL++ S T+KS+NGTP+
Sbjct: 1   MGNCQAAEAATVVIQHPGN-KVERIYWSLSAHQVMDSNPGHYVALVVPSPTLKSDNGTPM 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDXX 120
           KQLKLLRPDDTL IG VYRLI+FEDVLKEFA+KKC KLGKLLKE G   V MK + +   
Sbjct: 61  KQLKLLRPDDTLHIGQVYRLISFEDVLKEFASKKCGKLGKLLKETGGHGVQMKHRDNRAS 120

Query: 121 XXXXXXXXXXXYMKPEQDAEHRLENSNAGSSXXGRGQRGMGRHY-GGGSQWRPALQSIAE 180
                        K EQ+ + R+E++ + SS      +G+GRH+ G G QW+PALQSIAE
Sbjct: 121 NPSLTSKNEYSSSKVEQEIQ-RMESNGSSSS----NNKGVGRHFVGSGGQWKPALQSIAE 176

Query: 181 IG 182
           IG
Sbjct: 181 IG 176

The following BLAST results are available for this feature:

BLAST of CsGy6G028470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141857.1	2.1e-87	100.00	PREDICTED: uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hy...	[more]
XP_016899236.1	2.2e-84	89.19	PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo]	[more]
XP_022963138.1	1.8e-70	77.01	uncharacterized protein LOC111463436 [Cucurbita moschata]	[more]
XP_022132546.1	4.1e-70	75.68	uncharacterized protein LOC111005379 [Momordica charantia]	[more]
XP_022950406.1	2.2e-60	73.22	uncharacterized protein LOC111453516 [Cucurbita moschata]	[more]

BLAST of CsGy6G028470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67620.1	4.8e-49	55.43	unknown protein	[more]
AT5G62900.1	1.7e-22	38.55	unknown protein	[more]
AT5G50090.1	2.2e-22	38.71	unknown protein	[more]
AT1G60010.1	2.6e-18	46.43	unknown protein	[more]
AT1G10530.1	2.2e-17	45.61	unknown protein	[more]

BLAST of CsGy6G028470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G028470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KLJ3\|A0A0A0KLJ3_CUCSA	1.4e-87	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1	[more]
tr\|A0A1S4DTC0\|A0A1S4DTC0_CUCME	1.5e-84	89.19	uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=...	[more]
tr\|A0A2I4FVT5\|A0A2I4FVT5_9ROSI	6.9e-58	68.85	uncharacterized protein LOC109002449 OS=Juglans regia OX=51240 GN=LOC109002449 P...	[more]
tr\|A0A0L9TPC2\|A0A0L9TPC2_PHAAN	1.9e-52	63.19	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g198400 PE...	[more]
tr\|A0A0S3R5C4\|A0A0S3R5C4_PHAAN	1.9e-52	63.19	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G028470.1	CsGy6G028470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..179 e-value: 1.6E-30 score: 106.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..169
None	No IPR available	PANTHER	PTHR33413:SF1	SUBFAMILY NOT NAMED	coord: 1..180
None	No IPR available	PANTHER	PTHR33413	FAMILY NOT NAMED	coord: 1..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G028470	Cla014037	Watermelon (97103) v1	cgybwmB468
CsGy6G028470	Csa6G495750	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G028470	MELO3C007644	Melon (DHL92) v3.5.1	cgybmeB444
CsGy6G028470	ClCG01G017670	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G028470	CSPI06G29000	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G028470	CmaCh07G006420	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G028470	CmoCh07G006500	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G028470	Lsi01G008840	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G028470	Cp4.1LG10g02050	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G028470	Cp4.1LG19g10500	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G028470	MELO3C007644.2	Melon (DHL92) v3.6.1	cgybmedB440
CsGy6G028470	CsaV3_6G044200	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G028470	Cla97C01G016830	Watermelon (97103) v2	cgybwmbB394
CsGy6G028470	Bhi03G000801	Wax gourd	cgybwgoB591
CsGy6G028470	Carg00783	Silver-seed gourd	carcgybB0418
CsGy6G028470	Carg18542	Silver-seed gourd	carcgybB0003

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G028470	Cucumber (Gy14) v2	cgybcgybB064
CsGy6G028470	Cucumber (Gy14) v2	cgybcgybB129
CsGy6G028470	Cucurbita maxima (Rimu)	cgybcmaB699
CsGy6G028470	Cucurbita maxima (Rimu)	cgybcmaB715
CsGy6G028470	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G028470	Cucurbita maxima (Rimu)	cgybcmaB843
CsGy6G028470	Cucurbita moschata (Rifu)	cgybcmoB682
CsGy6G028470	Cucurbita moschata (Rifu)	cgybcmoB699
CsGy6G028470	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G028470	Cucurbita moschata (Rifu)	cgybcmoB822
CsGy6G028470	Cucurbita pepo (Zucchini)	cgybcpeB805
CsGy6G028470	Cucurbita pepo (Zucchini)	cgybcpeB870
CsGy6G028470	Cucurbita pepo (Zucchini)	cgybcpeB876
CsGy6G028470	Cucumber (Chinese Long) v2	cgybcuB249
CsGy6G028470	Cucumber (Chinese Long) v2	cgybcuB269
CsGy6G028470	Bottle gourd (USVL1VR-Ls)	cgyblsiB425
CsGy6G028470	Bottle gourd (USVL1VR-Ls)	cgyblsiB441
CsGy6G028470	Melon (DHL92) v3.5.1	cgybmeB412
CsGy6G028470	Melon (DHL92) v3.5.1	cgybmeB443
CsGy6G028470	Melon (DHL92) v3.6.1	cgybmedB410
CsGy6G028470	Melon (DHL92) v3.6.1	cgybmedB439
CsGy6G028470	Watermelon (Charleston Gray)	cgybwcgB461
CsGy6G028470	Watermelon (97103) v1	cgybwmB432
CsGy6G028470	Wild cucumber (PI 183967)	cgybcpiB257
CsGy6G028470	Wild cucumber (PI 183967)	cgybcpiB276
CsGy6G028470	Silver-seed gourd	carcgybB0388
CsGy6G028470	Cucumber (Chinese Long) v3	cgybcucB262
CsGy6G028470	Cucumber (Chinese Long) v3	cgybcucB284
CsGy6G028470	Watermelon (97103) v2	cgybwmbB470
CsGy6G028470	Wax gourd	cgybwgoB548