CmoCh04G016180 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTCTTCTTCTTCTTCTTCTTCCTCTTCTTTGTCCGCCATTTTCGTTCTCCTTCTCCTTCTTGTTTCTGGGTTTTGCTCTGCAACTCGGCCTGGTAAAACCATGGGACATGAGTTGAAACCCGACTTGTCGAATTTCAATTACAAGACGGGGTTCCGATATGTCGGTCAGACCTTCAGTTATCTTCCCAGAGGCGTCCCGATTCCTCCGTCAGGCCCTTCCGACCGCCACAACTCTCTGGTTGACTCTCTTCCTCCCAGTTAA ATGCTTTCTTCTTCTTCTTCTTCTTCCTCTTCTTTGTCCGCCATTTTCGTTCTCCTTCTCCTTCTTGTTTCTGGGTTTTGCTCTGCAACTCGGCCTGGTAAAACCATGGGACATGAGTTGAAACCCGACTTGTCGAATTTCAATTACAAGACGGGGTTCCGATATGTCGGTCAGACCTTCAGTTATCTTCCCAGAGGCGTCCCGATTCCTCCGTCAGGCCCTTCCGACCGCCACAACTCTCTGGTTGACTCTCTTCCTCCCAGTTAA ATGCTTTCTTCTTCTTCTTCTTCTTCCTCTTCTTTGTCCGCCATTTTCGTTCTCCTTCTCCTTCTTGTTTCTGGGTTTTGCTCTGCAACTCGGCCTGGTAAAACCATGGGACATGAGTTGAAACCCGACTTGTCGAATTTCAATTACAAGACGGGGTTCCGATATGTCGGTCAGACCTTCAGTTATCTTCCCAGAGGCGTCCCGATTCCTCCGTCAGGCCCTTCCGACCGCCACAACTCTCTGGTTGACTCTCTTCCTCCCAGTTAA
BLAST of CmoCh04G016180 vs. Swiss-Prot
Match: IDA_ARATH (Protein IDA OS=Arabidopsis thaliana GN=IDA PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 6.4e-09 Identity = 34/71 (47.89%), Postives = 41/71 (57.75%), Query Frame = 1
BLAST of CmoCh04G016180 vs. TrEMBL
Match: A0A0A0KR07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608230 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-22 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = 1
BLAST of CmoCh04G016180 vs. TrEMBL
Match: A0A0D2T2V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G187700 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.1e-11 Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 1
BLAST of CmoCh04G016180 vs. TrEMBL
Match: M5XH24_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017234mg PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.2e-11 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 1
BLAST of CmoCh04G016180 vs. TrEMBL
Match: V4TCI5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033191mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-10 Identity = 48/92 (52.17%), Postives = 58/92 (63.04%), Query Frame = 1
BLAST of CmoCh04G016180 vs. TrEMBL
Match: F6HF28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02790 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-10 Identity = 47/100 (47.00%), Postives = 59/100 (59.00%), Query Frame = 1
BLAST of CmoCh04G016180 vs. TAIR10
Match: AT1G68765.1 (AT1G68765.1 Putative membrane lipoprotein) HSP 1 Score: 61.2 bits (147), Expect = 3.6e-10 Identity = 34/71 (47.89%), Postives = 41/71 (57.75%), Query Frame = 1
BLAST of CmoCh04G016180 vs. NCBI nr
Match: gi|659091413|ref|XP_008446537.1| (PREDICTED: protein IDA [Cucumis melo]) HSP 1 Score: 114.8 bits (286), Expect = 7.8e-23 Identity = 66/96 (68.75%), Postives = 74/96 (77.08%), Query Frame = 1
BLAST of CmoCh04G016180 vs. NCBI nr
Match: gi|700196858|gb|KGN52035.1| (hypothetical protein Csa_5G608230 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 5.1e-22 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = 1
BLAST of CmoCh04G016180 vs. NCBI nr
Match: gi|694417107|ref|XP_009336645.1| (PREDICTED: protein IDA-like [Pyrus x bretschneideri]) HSP 1 Score: 78.2 bits (191), Expect = 8.1e-12 Identity = 48/96 (50.00%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of CmoCh04G016180 vs. NCBI nr
Match: gi|657994058|ref|XP_008389328.1| (PREDICTED: protein IDA [Malus domestica]) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-11 Identity = 48/96 (50.00%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of CmoCh04G016180 vs. NCBI nr
Match: gi|763783738|gb|KJB50809.1| (hypothetical protein B456_008G187700 [Gossypium raimondii]) HSP 1 Score: 76.3 bits (186), Expect = 3.1e-11 Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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