CmoCh02G005200 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G005200
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr02 : 2914491 .. 2916262 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGCTTTGTCACTTTATATAATATGAATCTCAATCTCTTCCTCTTCTTCTTCTTCTTTTCCATCAATACATAGCAATAAAAATTTCAACTCAGATTGGGAAGAGCTGATGGCAACAACCATCCATGGCGAAGAACACGATAAACAAGACGAAGACGAAGAAGAAGCGTTATCTTTGTGCGACCTTCCCGTCAAAGAAAAGCAGCAGCCTTCGCTTCTAAATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCACCGCCGCCGTCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCTGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTTCGAACCCAGCCACAATTGTTCATACATTTAATTTTTTTTTTTTAATTTCTTAATTTATTTAATTTTTCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGCAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTATGCTTTTTTAATTTCTCCCCATTTCAATTAATTATTTTATTTCAAACTTGGATATTTTTAAAATTATAATCTCCAAAATCCAACTCAAATTCAAACATCAAAATATATTACCGTTACACAAAATAAAAGGTTAAATTAATAATAATAAAATAAAATAAACTTTCCCAAAAAAAAATATATTGTTTTAACTTTAAAAGTTTTAATAATCTTTTAATTTTATAAAAATTGAATTTAGCAAAGTTTTATTAATATTTTTAATTTTTTTAAAAATATTTTACCCATTAACACTAATACCGTTAAAGATATTGTCCTTAGGTTTTCCCTATTTTAAAATGGCCCGATCTTAAAAGTTTGTTTTGTTCTCTTCTCCAACTAATAGATAATATTATTTTTATAAATTTATAGATATTTTTTTTTTAAATGTTAAAAATATTAATAAAAATTATATTTGAAATAAAATAATCACGGTTGGAGGATGGAAGTCCACACTAATTTAGGAAATGATCGATAAGTTAGGAATATTACCTCTATTGGTAGAGGCCAACTCTTGGGTAAGCCCAAACCAAAGCCACGAGAGCTTATGTTCAAAGAGGACATGATTGTGGAGAGTTGTGTTCATCTAATAATCACGATCTAGTTATATATTTTTAAAAAAATAATTGATGAAATATTTTGAATTGCAGGTGTTCAAGTATTAGTAACAATTCCATTTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAACAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCGACTTTCGGCCGCCGGAGCCGGAGCCGGAGCTCCTCCCGCTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCAGGGATGGAACTTCACGACCTCAAAACTCGCACCACCGTCAGCAACGCGGTACCCACGGTGGGGCAGAAAACAACCGCCTCGTTTTTGGGTGTGGTGAGCTGCAAAAAATCAGTGGAGACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGGGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAGAAGGAATTGAATGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACAATCATCTTGA

mRNA sequence

CTTTGCTTTGTCACTTTATATAATATGAATCTCAATCTCTTCCTCTTCTTCTTCTTCTTTTCCATCAATACATAGCAATAAAAATTTCAACTCAGATTGGGAAGAGCTGATGGCAACAACCATCCATGGCGAAGAACACGATAAACAAGACGAAGACGAAGAAGAAGCGTTATCTTTGTGCGACCTTCCCGTCAAAGAAAAGCAGCAGCCTTCGCTTCTAAATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCACCGCCGCCGTCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCTGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGCAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTGTTCAAGTATTAGTAACAATTCCATTTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAACAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCGACTTTCGGCCGCCGGAGCCGGAGCCGGAGCTCCTCCCGCTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCAGGGATGGAACTTCACGACCTCAAAACTCGCACCACCGTCAGCAACGCGGTACCCACGGTGGGGCAGAAAACAACCGCCTCGTTTTTGGGTGTGGTGAGCTGCAAAAAATCAGTGGAGACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGGGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAGAAGGAATTGAATGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACAATCATCTTGA

Coding sequence (CDS)

ATGGCAACAACCATCCATGGCGAAGAACACGATAAACAAGACGAAGACGAAGAAGAAGCGTTATCTTTGTGCGACCTTCCCGTCAAAGAAAAGCAGCAGCCTTCGCTTCTAAATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCACCGCCGCCGTCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCTGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGCAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTGTTCAAGTATTAGTAACAATTCCATTTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAACAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCGACTTTCGGCCGCCGGAGCCGGAGCCGGAGCTCCTCCCGCTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCAGGGATGGAACTTCACGACCTCAAAACTCGCACCACCGTCAGCAACGCGGTACCCACGGTGGGGCAGAAAACAACCGCCTCGTTTTTGGGTGTGGTGAGCTGCAAAAAATCAGTGGAGACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGGGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAGAAGGAATTGAATGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACAATCATCTTGA

Homology

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BLAST of CmoCh02G005200 vs. TrEMBL
Match: A0A0A0LPT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277620 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.8e-84
Identity = 195/300 (65.00%), Postives = 225/300 (75.00%), Query Frame = 1


Query: 8   EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITE---DFDFNHWPPPPSPPPMCAAD 67
           ++ D+++E+EEEALSLCDLPVKEKQQP+      + E   DFDFNHW PPPSP  M  AD
Sbjct: 27  DDDDEEEEEEEEALSLCDLPVKEKQQPTRSVSTTVVETDQDFDFNHWRPPPSP--MLTAD 86

Query: 68  DIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFRNGSSSSSSNSSRSHY 127
           D+FFQGH+LPLRLS SS+N+ N+  +  L  RSESMD +NMLRFRN S+SSSS  SRSHY
Sbjct: 87  DLFFQGHMLPLRLSFSSENSQNN--NGNLWCRSESMDGNNMLRFRNESTSSSS--SRSHY 146

Query: 128 SRCSSISNNSISIPTNSKPR-TQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFFRV 187
           SR SS+SNNSISIPTNSKPR + NNVFHSHPSPTPQIRSFST     RSRSSSRW+FFR+
Sbjct: 147 SRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSH--RSRSSSRWEFFRL 206

Query: 188 GLLRTPGMELHDLKTRTTVSNAVPT---VGQKTTASFLGVVSCKKSVETIPAAKKIKNWS 247
           GLLRTPGMELHDLKTRTT +    T      KTTAS LGVVSCK+SVET+P     KN  
Sbjct: 207 GLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGVVSCKRSVETVPTTTGSKN-- 266

Query: 248 GNIGKKRNEKGKGIGIREKELNDN-VEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQ 299
                 R  +   +   +K  +DN VEIREKEKEK  R+SHRRTFEWLKQLSHATF ++Q
Sbjct: 267 ------RIRRENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 310

[Close]

BLAST of CmoCh02G005200 vs. TrEMBL
Match: A0A0D2RFS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G028600 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.2e-33
Identity = 128/331 (38.67%), Postives = 165/331 (49.85%), Query Frame = 1


Query: 8   EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNEN----PITEDFDFNHWPPPP----SPPP 67
           E+ + +DE++EEALSLCDLPV   ++  L NE        EDF+F  WP       S P 
Sbjct: 6   EKREVEDEEQEEALSLCDLPVNLIEEKELKNEENGEPSQEEDFNFGSWPGHGGSFRSEPE 65

Query: 68  MCAADDIFFQGHLLPLRLSVSSDNTH----NHFFSKPLSARSESMDHNMLRFRNGSSSSS 127
           MC AD++FFQG +LPLR SVSSD       +H  S+ LS RSESMDH  L  R  S SSS
Sbjct: 66  MCVADEVFFQGQILPLRHSVSSDTGFRRHDSHNMSRSLS-RSESMDHGSLS-RFTSVSSS 125

Query: 128 SNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSS 187
           S  S SHYS  S+ S + + I  N         F++HPSP PQIRS  T       RSSS
Sbjct: 126 STRSSSHYSTSSTNSKSGMKIRNN---------FNTHPSPKPQIRSTRTAVNSRIQRSSS 185

Query: 188 RWDFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKI 247
            WDFF++GL+R P + L DLK +    N+V               SC  S  +  + K +
Sbjct: 186 MWDFFKIGLVRAPELGLQDLKMKPRNKNSVSRNS-----------SCNSS-NSSSSTKLV 245

Query: 248 KNWSGNIGKKRNEKGKGIGIREKE------------------LNDNVEIREKEKEKAT-- 294
            N S      +N++    G+ EK                   LN+N  I+  +K+K T  
Sbjct: 246 NNGSSTAEVSKNQQESNKGLVEKRMGLFSGCTCSVNAVETVPLNNNNNIKNSDKDKTTSH 305

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BLAST of CmoCh02G005200 vs. TrEMBL
Match: A0A061DNT4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000746 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.9e-31
Identity = 142/387 (36.69%), Postives = 190/387 (49.10%), Query Frame = 1


Query: 1   MATTIHGEEHDK--QDEDEEEALSLCDLPV---KEKQQPSLLNENP-------ITEDFDF 60
           M T ++ +E +K   +E+EEEALSLCDLPV   KE+ Q    N            EDF+F
Sbjct: 1   METAVNCDEEEKWEAEEEEEEALSLCDLPVNLIKEENQVQPGNYEDGESQAIKTEEDFNF 60

Query: 61  NHWPPPPSPPP-MCAADDIFFQGHLLPLRLSVSSDNTHNHF------FSKPLSARSESMD 120
             W    S  P MCAAD++FF+G +LPLRLSVSSD+    F       S+ LS RSESMD
Sbjct: 61  GSWGGSLSTEPQMCAADEVFFKGQILPLRLSVSSDSGLTGFRQDSQNTSRCLS-RSESMD 120

Query: 121 HNML-RFRNGSSSSSSNSSRS-HYS----------------RCSSISNNSISIPTNSKPR 180
           H  L RF + SSSS S+S+RS HYS                   S SN+S +  + SKP 
Sbjct: 121 HGSLSRFTSISSSSRSSSTRSSHYSIGSSNSITVTARNFNSNSKSNSNSSSTSNSKSKPI 180

Query: 181 TQNNVFHSHPSPTPQIRSFST--FGRRSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTV 240
              N F++HPSP PQIR   T      SR++ +S WDFFR+GL+R P +EL DLK R+  
Sbjct: 181 KIRNNFNTHPSPKPQIRLSKTRPVNVSSRNQKTSMWDFFRLGLVRAPELELQDLKVRSNN 240

Query: 241 SNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSGNIGKKRNEKGKG-----IGIR 298
           +NA     + + +      S   S  T  +  KI N SG + + + +  KG     IG+ 
Sbjct: 241 NNA----NRNSVSRNSSCNSSNSSSSTKNSTSKIVNNSGEVARNQQDLNKGFLEKRIGLF 300

[Close]

BLAST of CmoCh02G005200 vs. TrEMBL
Match: A0A0D2PQT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G080000 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.9e-31
Identity = 142/346 (41.04%), Postives = 189/346 (54.62%), Query Frame = 1


Query: 2   ATTIHGEEHDKQDEDEEEALSLCDLPV---KEKQQPSLLNENP-------ITEDFDFNHW 61
           A+    E+  + +E+EEEALSLCDLPV   KE+ Q    NE           EDF+F  W
Sbjct: 13  ASNCDEEQKCEAEEEEEEALSLCDLPVNLIKEENQIQPRNEEDGESQAIKTEEDFNFGSW 72

Query: 62  PPPPSPPP-MCAADDIFFQGHLLPLRLSVSSDNT--HNHFFSKPLSARSESMDHNML-RF 121
               S  P MCAAD++FF+G +LPL +S+SSD++    H        RSES+DH  L RF
Sbjct: 73  DGCLSTKPEMCAADEVFFKGQILPLCVSISSDSSLIWCHRQDSQNKPRSESIDHGSLSRF 132

Query: 122 RNGSSSS-SSNSSRSHYSRCSSISN--------NSISIPTNSKPRTQNNVFHSHPSPTPQ 181
            + +SSS SS++  SHYS  SS S         NSI+  + S P    N F++HPSP PQ
Sbjct: 133 TSVTSSSRSSSTGSSHYSTNSSNSTTVTAATSFNSIT-SSKSNPNKSINNFNTHPSPKPQ 192

Query: 182 IRSFST----FGRRSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTVSN--AVPTVGQKT 241
           IR   T            SSS WDFFR+GL+R P +E H+LK RT  +N  +  +V + +
Sbjct: 193 IRLSKTRPMNISSSRNQTSSSVWDFFRLGLVRAPELEFHELKIRTNNNNNPSRNSVSRNS 252

Query: 242 TAS-----------FL--GVVS-CKKS---VETIPAAKKIKNWSGNIGKKRNEKGKGI-- 298
           + S           FL  G+ S CK S   VET+P   KI      + KK++EK K +  
Sbjct: 253 SCSSSNSQLDSIKGFLRKGLFSGCKCSVNVVETVP-LNKIAVIKSMMIKKKSEKEKAMFQ 312

[Close]

BLAST of CmoCh02G005200 vs. TrEMBL
Match: U7DVN2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0318s00200g PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-28
Identity = 132/376 (35.11%), Postives = 183/376 (48.67%), Query Frame = 1


Query: 8   EEHDKQDEDEEEALSLCDLPVK---------EKQQPSLLNENPITEDFDFNHWPPPP--- 67
           ++ + QD++EEE+LSLCDLPV           + Q +        EDFDF  +       
Sbjct: 18  QDEEDQDQEEEESLSLCDLPVNMVKGENNQSTRDQEAHKETETNQEDFDFGPFRGGDGSL 77

Query: 68  -SPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKP------LSARSESMDHNMLRFR 127
            +   MCAADDIFFQG +LPLRLSVSS++  N F +          +RSESMDHN L   
Sbjct: 78  SNKSDMCAADDIFFQGQILPLRLSVSSESGVNKFKNDTSLNPCHCLSRSESMDHNSLGGL 137

Query: 128 NGSSSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIR-SFSTFGR 187
             S SS S+SSRSHYS  S+ ++++I+     KP  QN  F +HPSP PQIR S ++ G 
Sbjct: 138 T-SFSSRSSSSRSHYSSSSTSTSSAIASTRMIKPIIQNQ-FLTHPSPKPQIRLSSASLGN 197

Query: 188 --RSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKK- 247
              S+ R+SS WDFFR+GL+RTP +E  DLK R  VS         +++S   +  C K 
Sbjct: 198 AASSKPRNSSVWDFFRLGLVRTPEIEFQDLKVRNYVSR-----NSSSSSSNSSINKCSKI 257

Query: 248 --SVETIPAAKKIKNWSGNIGKKRNEKGKGIG---------------------IREKELN 299
             S     +++KIKN S +     N+ GK +G                     ++   LN
Sbjct: 258 NVSNGNSKSSRKIKNESRH---NSNDSGKKMGKRSLLEKRGGLLSGCSCSVSTVKPVPLN 317

[Close]

BLAST of CmoCh02G005200 vs. TAIR10
Match: AT5G67350.1 (AT5G67350.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 5.2e-16
Identity = 93/307 (30.29%), Postives = 141/307 (45.93%), Query Frame = 1


Query: 8   EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFD----------FNHWPPPPSP 67
           ++ D ++E+EEEALSLCDLP ++ +  S++ E    E+FD          F        P
Sbjct: 22  DDDDVEEEEEEEALSLCDLPNEKGELRSIVKEED--EEFDSGFEFGIGSSFRAGSDSCEP 81

Query: 68  PP-MCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSS 127
            P M  AD++FF+G +LPLR SVS D   N      L  RSES++      R G      
Sbjct: 82  APEMSTADELFFKGRILPLRHSVSLDAGLNE--PTRLITRSESVEFR----RTG------ 141

Query: 128 NSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRS----R 187
                              I  + +    N + +S PSP PQIR  S+   R  S    +
Sbjct: 142 -------------------IIRSDRKIKNNFIDYSQPSPQPQIRRSSSMTARVNSIRNPK 201

Query: 188 SSSRWDFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAA 247
           SSS WDF R+GL+RTP +EL     RTT  NA  +V + ++ S     S  K + +  + 
Sbjct: 202 SSSIWDFLRLGLVRTPEIEL-----RTTAGNAKLSVSRNSSCSSTSTSSNSKKIGSGESR 261

Query: 248 KKIKNWS-------GNIGKKRNEKGKGIGIREKELNDNVEIREK---EKEKATRLSHRRT 290
            + +  S        ++  +       I +   E  +   + EK   +KE+ + ++ +RT
Sbjct: 262 SRNRRRSFMFSDCKCSVSTETKMAPVKIKVSSGETEEKQRMMEKKTAKKEEKSAMARKRT 290

[Close]

BLAST of CmoCh02G005200 vs. NCBI nr
Match: gi|778669884|ref|XP_011649316.1| (PREDICTED: homeobox protein 6-like [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 5.4e-84
Identity = 195/300 (65.00%), Postives = 225/300 (75.00%), Query Frame = 1


Query: 8   EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITE---DFDFNHWPPPPSPPPMCAAD 67
           ++ D+++E+EEEALSLCDLPVKEKQQP+      + E   DFDFNHW PPPSP  M  AD
Sbjct: 27  DDDDEEEEEEEEALSLCDLPVKEKQQPTRSVSTTVVETDQDFDFNHWRPPPSP--MLTAD 86

Query: 68  DIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFRNGSSSSSSNSSRSHY 127
           D+FFQGH+LPLRLS SS+N+ N+  +  L  RSESMD +NMLRFRN S+SSSS  SRSHY
Sbjct: 87  DLFFQGHMLPLRLSFSSENSQNN--NGNLWCRSESMDGNNMLRFRNESTSSSS--SRSHY 146

Query: 128 SRCSSISNNSISIPTNSKPR-TQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFFRV 187
           SR SS+SNNSISIPTNSKPR + NNVFHSHPSPTPQIRSFST     RSRSSSRW+FFR+
Sbjct: 147 SRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSH--RSRSSSRWEFFRL 206

Query: 188 GLLRTPGMELHDLKTRTTVSNAVPT---VGQKTTASFLGVVSCKKSVETIPAAKKIKNWS 247
           GLLRTPGMELHDLKTRTT +    T      KTTAS LGVVSCK+SVET+P     KN  
Sbjct: 207 GLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGVVSCKRSVETVPTTTGSKN-- 266

Query: 248 GNIGKKRNEKGKGIGIREKELNDN-VEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQ 299
                 R  +   +   +K  +DN VEIREKEKEK  R+SHRRTFEWLKQLSHATF ++Q
Sbjct: 267 ------RIRRENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 310

[Close]

BLAST of CmoCh02G005200 vs. NCBI nr
Match: gi|659115855|ref|XP_008457772.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 8.7e-82
Identity = 193/295 (65.42%), Postives = 223/295 (75.59%), Query Frame = 1


Query: 11  DKQDEDEEEALSLCDLPVKEKQQPSLLNENPI--TEDFDFNHWPPPPSPPPMCAADDIFF 70
           D  D++EEEALSLCDLPVKEKQQP+      I  TEDFDFN+W PPPSP  M  ADD+FF
Sbjct: 27  DDDDDEEEEALSLCDLPVKEKQQPTRSVSATIVETEDFDFNNWRPPPSP--MLTADDLFF 86

Query: 71  QGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFRNGSSSSSSNSSRSHYSRCS 130
           QGH+LPLRLS SS+N+ N+  +  L +RSESMD +NMLRFRNGS+SSSS  SRSHYSR S
Sbjct: 87  QGHMLPLRLSFSSENSQNN--NGNLWSRSESMDRNNMLRFRNGSTSSSS--SRSHYSRSS 146

Query: 131 SISNNSISIPT-NSKPR-TQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFFRVGLL 190
           S+SNNSISIPT N+KPR + NNVFHSHPSPTPQIRSFST   RSRS  SSRW+FFR+GLL
Sbjct: 147 SLSNNSISIPTTNTKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRS--SSRWEFFRLGLL 206

Query: 191 RTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSGNIGKK 250
           RTPGMELHDLKTRTT +        KTTAS LGVVSCK+SV+T+P      N   N  ++
Sbjct: 207 RTPGMELHDLKTRTTTTTTTTMTTHKTTASILGVVSCKRSVDTVPTTTGSSN---NRIRR 266

Query: 251 RNEKGKGIGIREKELNDNVEIREKEKEKAT--RLSHRRTFEWLKQLSHATFADQQ 299
            N       + +K  N+ VEIREKEKEK    R+SHRRTFEWLKQLSHATF ++Q
Sbjct: 267 EN-------VLKKNNNNKVEIREKEKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 303

[Close]

BLAST of CmoCh02G005200 vs. NCBI nr
Match: gi|823139478|ref|XP_012469599.1| (PREDICTED: probable membrane-associated kinase regulator 1 [Gossypium raimondii])

HSP 1 Score: 149.8 bits (377), Expect = 7.5e-33
Identity = 128/331 (38.67%), Postives = 165/331 (49.85%), Query Frame = 1


Query: 8   EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNEN----PITEDFDFNHWPPPP----SPPP 67
           E+ + +DE++EEALSLCDLPV   ++  L NE        EDF+F  WP       S P 
Sbjct: 6   EKREVEDEEQEEALSLCDLPVNLIEEKELKNEENGEPSQEEDFNFGSWPGHGGSFRSEPE 65

Query: 68  MCAADDIFFQGHLLPLRLSVSSDNTH----NHFFSKPLSARSESMDHNMLRFRNGSSSSS 127
           MC AD++FFQG +LPLR SVSSD       +H  S+ LS RSESMDH  L  R  S SSS
Sbjct: 66  MCVADEVFFQGQILPLRHSVSSDTGFRRHDSHNMSRSLS-RSESMDHGSLS-RFTSVSSS 125

Query: 128 SNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSS 187
           S  S SHYS  S+ S + + I  N         F++HPSP PQIRS  T       RSSS
Sbjct: 126 STRSSSHYSTSSTNSKSGMKIRNN---------FNTHPSPKPQIRSTRTAVNSRIQRSSS 185

Query: 188 RWDFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKI 247
            WDFF++GL+R P + L DLK +    N+V               SC  S  +  + K +
Sbjct: 186 MWDFFKIGLVRAPELGLQDLKMKPRNKNSVSRNS-----------SCNSS-NSSSSTKLV 245

Query: 248 KNWSGNIGKKRNEKGKGIGIREKE------------------LNDNVEIREKEKEKAT-- 294
            N S      +N++    G+ EK                   LN+N  I+  +K+K T  
Sbjct: 246 NNGSSTAEVSKNQQESNKGLVEKRMGLFSGCTCSVNAVETVPLNNNNNIKNSDKDKTTSH 305

[Close]

BLAST of CmoCh02G005200 vs. NCBI nr
Match: gi|590705501|ref|XP_007047456.1| (Uncharacterized protein TCM_000746 [Theobroma cacao])

HSP 1 Score: 143.3 bits (360), Expect = 7.0e-31
Identity = 142/387 (36.69%), Postives = 190/387 (49.10%), Query Frame = 1


Query: 1   MATTIHGEEHDK--QDEDEEEALSLCDLPV---KEKQQPSLLNENP-------ITEDFDF 60
           M T ++ +E +K   +E+EEEALSLCDLPV   KE+ Q    N            EDF+F
Sbjct: 1   METAVNCDEEEKWEAEEEEEEALSLCDLPVNLIKEENQVQPGNYEDGESQAIKTEEDFNF 60

Query: 61  NHWPPPPSPPP-MCAADDIFFQGHLLPLRLSVSSDNTHNHF------FSKPLSARSESMD 120
             W    S  P MCAAD++FF+G +LPLRLSVSSD+    F       S+ LS RSESMD
Sbjct: 61  GSWGGSLSTEPQMCAADEVFFKGQILPLRLSVSSDSGLTGFRQDSQNTSRCLS-RSESMD 120

Query: 121 HNML-RFRNGSSSSSSNSSRS-HYS----------------RCSSISNNSISIPTNSKPR 180
           H  L RF + SSSS S+S+RS HYS                   S SN+S +  + SKP 
Sbjct: 121 HGSLSRFTSISSSSRSSSTRSSHYSIGSSNSITVTARNFNSNSKSNSNSSSTSNSKSKPI 180

Query: 181 TQNNVFHSHPSPTPQIRSFST--FGRRSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTV 240
              N F++HPSP PQIR   T      SR++ +S WDFFR+GL+R P +EL DLK R+  
Sbjct: 181 KIRNNFNTHPSPKPQIRLSKTRPVNVSSRNQKTSMWDFFRLGLVRAPELELQDLKVRSNN 240

Query: 241 SNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSGNIGKKRNEKGKG-----IGIR 298
           +NA     + + +      S   S  T  +  KI N SG + + + +  KG     IG+ 
Sbjct: 241 NNA----NRNSVSRNSSCNSSNSSSSTKNSTSKIVNNSGEVARNQQDLNKGFLEKRIGLF 300

[Close]

BLAST of CmoCh02G005200 vs. NCBI nr
Match: gi|823206427|ref|XP_012437092.1| (PREDICTED: uncharacterized protein LOC105763405 [Gossypium raimondii])

HSP 1 Score: 143.3 bits (360), Expect = 7.0e-31
Identity = 142/346 (41.04%), Postives = 189/346 (54.62%), Query Frame = 1


Query: 2   ATTIHGEEHDKQDEDEEEALSLCDLPV---KEKQQPSLLNENP-------ITEDFDFNHW 61
           A+    E+  + +E+EEEALSLCDLPV   KE+ Q    NE           EDF+F  W
Sbjct: 13  ASNCDEEQKCEAEEEEEEALSLCDLPVNLIKEENQIQPRNEEDGESQAIKTEEDFNFGSW 72

Query: 62  PPPPSPPP-MCAADDIFFQGHLLPLRLSVSSDNT--HNHFFSKPLSARSESMDHNML-RF 121
               S  P MCAAD++FF+G +LPL +S+SSD++    H        RSES+DH  L RF
Sbjct: 73  DGCLSTKPEMCAADEVFFKGQILPLCVSISSDSSLIWCHRQDSQNKPRSESIDHGSLSRF 132

Query: 122 RNGSSSS-SSNSSRSHYSRCSSISN--------NSISIPTNSKPRTQNNVFHSHPSPTPQ 181
            + +SSS SS++  SHYS  SS S         NSI+  + S P    N F++HPSP PQ
Sbjct: 133 TSVTSSSRSSSTGSSHYSTNSSNSTTVTAATSFNSIT-SSKSNPNKSINNFNTHPSPKPQ 192

Query: 182 IRSFST----FGRRSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTVSN--AVPTVGQKT 241
           IR   T            SSS WDFFR+GL+R P +E H+LK RT  +N  +  +V + +
Sbjct: 193 IRLSKTRPMNISSSRNQTSSSVWDFFRLGLVRAPELEFHELKIRTNNNNNPSRNSVSRNS 252

Query: 242 TAS-----------FL--GVVS-CKKS---VETIPAAKKIKNWSGNIGKKRNEKGKGI-- 298
           + S           FL  G+ S CK S   VET+P   KI      + KK++EK K +  
Sbjct: 253 SCSSSNSQLDSIKGFLRKGLFSGCKCSVNVVETVP-LNKIAVIKSMMIKKKSEKEKAMFQ 312

The following BLAST results are available for this feature:

BLAST of CmoCh02G005200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh02G005200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPT6_CUCSA	3.8e-84	65.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277620 PE=4 SV=1	[more]
A0A0D2RFS0_GOSRA	5.2e-33	38.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G028600 PE=4 SV=1	[more]
A0A061DNT4_THECC	4.9e-31	36.69	Uncharacterized protein OS=Theobroma cacao GN=TCM_000746 PE=4 SV=1	[more]
A0A0D2PQT2_GOSRA	4.9e-31	41.04	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G080000 PE=4 SV=1	[more]
U7DVN2_POPTR	2.3e-28	35.11	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0318s00200g PE=4 SV=1	[more]

BLAST of CmoCh02G005200 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67350.1	5.2e-16	30.29	unknown protein	[more]

BLAST of CmoCh02G005200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669884\|ref\|XP_011649316.1\|	5.4e-84	65.00	PREDICTED: homeobox protein 6-like [Cucumis sativus]	[more]
gi\|659115855\|ref\|XP_008457772.1\|	8.7e-82	65.42	PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis me...	[more]
gi\|823139478\|ref\|XP_012469599.1\|	7.5e-33	38.67	PREDICTED: probable membrane-associated kinase regulator 1 [Gossypium raimondii]	[more]
gi\|590705501\|ref\|XP_007047456.1\|	7.0e-31	36.69	Uncharacterized protein TCM_000746 [Theobroma cacao]	[more]
gi\|823206427\|ref\|XP_012437092.1\|	7.0e-31	41.04	PREDICTED: uncharacterized protein LOC105763405 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G005200.1	CmoCh02G005200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 257..277 scor
None	No IPR available	PANTHER	PTHR33922	FAMILY NOT NAMED	coord: 8..300 score: 1.5
None	No IPR available	PANTHER	PTHR33922:SF2	SUBFAMILY NOT NAMED	coord: 8..300 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G005200	CmaCh02G005090	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G005200	Cp4.1LG05g11710	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G005200	CsGy6G028110	Cucumber (Gy14) v2	cgybcmoB795
CmoCh02G005200	Carg25146	Silver-seed gourd	carcmoB0556

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G005200	Cucumber (Gy14) v2	cgybcmoB223
CmoCh02G005200	Melon (DHL92) v3.6.1	cmomedB607
CmoCh02G005200	Cucumber (Chinese Long) v3	cmocucB0682
CmoCh02G005200	Cucumber (Chinese Long) v3	cmocucB0690
CmoCh02G005200	Cucumber (Chinese Long) v3	cmocucB0737
CmoCh02G005200	Watermelon (97103) v2	cmowmbB607
CmoCh02G005200	Wax gourd	cmowgoB0742
CmoCh02G005200	Wax gourd	cmowgoB0759
CmoCh02G005200	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G005200	Cucumber (Gy14) v1	cgycmoB0224
CmoCh02G005200	Cucumber (Gy14) v1	cgycmoB1017
CmoCh02G005200	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G005200	Wild cucumber (PI 183967)	cmocpiB576
CmoCh02G005200	Wild cucumber (PI 183967)	cmocpiB623
CmoCh02G005200	Cucumber (Chinese Long) v2	cmocuB571
CmoCh02G005200	Cucumber (Chinese Long) v2	cmocuB617
CmoCh02G005200	Melon (DHL92) v3.5.1	cmomeB528
CmoCh02G005200	Melon (DHL92) v3.5.1	cmomeB575
CmoCh02G005200	Watermelon (Charleston Gray)	cmowcgB518
CmoCh02G005200	Watermelon (Charleston Gray)	cmowcgB542
CmoCh02G005200	Watermelon (97103) v1	cmowmB565
CmoCh02G005200	Watermelon (97103) v1	cmowmB589
CmoCh02G005200	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G005200	Bottle gourd (USVL1VR-Ls)	cmolsiB537