CmaCh02G005090 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G005090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_8
Location	Cma_Chr02 : 2758086 .. 2760087 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTCTTTGCTTTGTCACTTTATATAATATGAATCTCAATCTCTTCTTCTTCTTTTCCATTAATACATAGCAATAAAAAATTTCAACTCAGAGTGGGAAGAGCTCATGGCAACAACCATCCATGGCGATGAACACGATAATCAAGACGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAGGCATTATCTATGTGCGACCTTCCTGTCAAAGAAAAGCAGCAGCCTTTGCTTCTAGATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCCGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTTCGAACCCAGCTACAATTTTTCACAGATTTATTTTATTCTATTTTTTTTATTTTTTTTTTAATTTTCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTATGCTTTTTTAATTTCTTCCCATTTCAATTAATTATTTTTTTTGAAACTTGGATATTTTTTAAATTATAATCGCCAAAATCCAACCCAAATTCAAACCTCAAAATATATTACCGTTGCACAAAATAAAAAGTTAAATTAATAATAATAAATAAATAAATAAATAAAACTTTCCCACAAAAAAATATATATTGTTTTAACTTTTAAAACTGTTAATTTTATAAAAATTGAATTTTGAAAAGTTTTATTAATATTTTTAATTTTTTTAAAAATATGTTTATCGTTAACCTTAATACCCTTAAATATTTGGGTTATTATTTTTAAAATTCAAGACGAGAATCAGATTTTTTTTATGAGAATAGAAGATTGTAACGATCCAATATACTGCTAATAGATATTGTCTTTGGATCATTATCTCTAAAATGGGTCTGAGGATGTTTTTATTCTTCTCTCCAACCCAAGTTTATAGATATTTTTTAAAAGAATTGTTAAAAATATTAATAAAATTTATAATTGAAATAAAGTAATCACGATTTCCATTATATATTTTTTAAAAATAATTGATGAAATATTTTGAATTGCAGGTGTTCAAGTATTAGTAACAATTCCATCTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAATAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCAACTTTCGGGCGCCGGAGCTCCTCCCGTTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACGACCAACGGCGCCGCTTTCGAGGCGGAACCCACGGTGGGGCAGAAAACAAGAGGCACGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGTGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAAAATGAATTGAACGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACACTCATCTTGACCCCATTTTTTTTTACTTACTTCTTCCCCCACCACCATGCTTGTACCACTTTAATTATTCCTTCCCACTTACCCTTTTCAATTCACTTGTAGTGTTTTAAACCTTTTTCATTTTTAAATTTAGATGAACTAAACGATGGGATGAATCTTATCGAGACCCTAATAAGAAACATAGTTGCAAAAATTGATTCTTGTTAGAAGGGTTCGTAGGCAGGTGGGTTTAATCCAATTTAGTGGTAAAAAAACTTATGAACCACATTTTTATAACCCAATTTCTTTTTGAATTAGTTGACTTTTGGGAGTTCGAACGATGGAGAATTTGAGTTGGGGTGAGAGGG

mRNA sequence

TCATTCTTTGCTTTGTCACTTTATATAATATGAATCTCAATCTCTTCTTCTTCTTTTCCATTAATACATAGCAATAAAAAATTTCAACTCAGAGTGGGAAGAGCTCATGGCAACAACCATCCATGGCGATGAACACGATAATCAAGACGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAGGCATTATCTATGTGCGACCTTCCTGTCAAAGAAAAGCAGCAGCCTTTGCTTCTAGATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCCGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTGTTCAAGTATTAGTAACAATTCCATCTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAATAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCAACTTTCGGGCGCCGGAGCTCCTCCCGTTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACGACCAACGGCGCCGCTTTCGAGGCGGAACCCACGGTGGGGCAGAAAACAAGAGGCACGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGTGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAAAATGAATTGAACGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACACTCATCTTGACCCCATTTTTTTTTACTTACTTCTTCCCCCACCACCATGCTTGTACCACTTTAATTATTCCTTCCCACTTACCCTTTTCAATTCACTTGTAGTGTTTTAAACCTTTTTCATTTTTAAATTTAGATGAACTAAACGATGGGATGAATCTTATCGAGACCCTAATAAGAAACATAGTTGCAAAAATTGATTCTTGTTAGAAGGGTTCGTAGGCAGGTGGGTTTAATCCAATTTAGTGGTAAAAAAACTTATGAACCACATTTTTATAACCCAATTTCTTTTTGAATTAGTTGACTTTTGGGAGTTCGAACGATGGAGAATTTGAGTTGGGGTGAGAGGG

Coding sequence (CDS)

ATGGCAACAACCATCCATGGCGATGAACACGATAATCAAGACGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAGGCATTATCTATGTGCGACCTTCCTGTCAAAGAAAAGCAGCAGCCTTTGCTTCTAGATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCCGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTGTTCAAGTATTAGTAACAATTCCATCTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAATAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCAACTTTCGGGCGCCGGAGCTCCTCCCGTTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACGACCAACGGCGCCGCTTTCGAGGCGGAACCCACGGTGGGGCAGAAAACAAGAGGCACGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGTGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAAAATGAATTGAACGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACACTCATCTTGA

Protein sequence

MATTIHGDEHDNQDEEDEEEEEEEEALSMCDLPVKEKQQPLLLDENPITEDFDFNHWPPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSSSRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIPAAKKIKNWSGNIVKKRNEKGKGIGIRENELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQHSS

Homology

[Close]

BLAST of CmaCh02G005090 vs. TrEMBL
Match: A0A0A0LPT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277620 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.9e-82
Identity = 191/310 (61.61%), Postives = 223/310 (71.94%), Query Frame = 1


Query: 6   HGDEHDNQ---------DEEDEEEEEEEEALSMCDLPVKEKQQPLLLDENPITE---DFD 65
           HGDE   +         D++DEEEEEEEEALS+CDLPVKEKQQP       + E   DFD
Sbjct: 10  HGDERCEEEDKEETQIDDDDDEEEEEEEEALSLCDLPVKEKQQPTRSVSTTVVETDQDFD 69

Query: 66  FNHW--PPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFR 125
           FNHW  PP PM  ADD+FFQGH+LPLRLS SS+N+ N+  +  L  RSESMD +NMLRFR
Sbjct: 70  FNHWRPPPSPMLTADDLFFQGHMLPLRLSFSSENSQNN--NGNLWCRSESMDGNNMLRFR 129

Query: 126 NGSSSSSNSSRSHYSRCSSISNNSISIPTNSKPR-TQNNVFHSHPSPTPQIRSFSTFGRR 185
           N S+SSS SSRSHYSR SS+SNNSISIPTNSKPR + NNVFHSHPSPTPQIRSFST   R
Sbjct: 130 NESTSSS-SSRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHR 189

Query: 186 S--SSRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVD 245
           S  SSRW+FFR+GLLRTPGMELHDLKTRTT         +   KT  + LGVVSCK+SV+
Sbjct: 190 SRSSSRWEFFRLGLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGVVSCKRSVE 249

Query: 246 TIPAAKKIKNWSGNIVKKRNEKGKGIGIRENELNDNVEIREKEKEKATRLSHRRTFEWLK 298
           T+P        S N +++ N        ++N  ++ VEIREKEKEK  R+SHRRTFEWLK
Sbjct: 250 TVPTT----TGSKNRIRRENVLENN---KKNNDDNKVEIREKEKEKERRVSHRRTFEWLK 309

[Close]

BLAST of CmaCh02G005090 vs. TrEMBL
Match: A0A0D2PQT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G080000 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 137/344 (39.83%), Postives = 180/344 (52.33%), Query Frame = 1


Query: 12  NQDEED--EEEEEEEEALSMCDLPV---KEKQQPLLLDENP-------ITEDFDFNHWP- 71
           N DEE   E EEEEEEALS+CDLPV   KE+ Q    +E           EDF+F  W  
Sbjct: 15  NCDEEQKCEAEEEEEEALSLCDLPVNLIKEENQIQPRNEEDGESQAIKTEEDFNFGSWDG 74

Query: 72  ----PPPMCAADDIFFQGHLLPLRLSVSSDNT--HNHFFSKPLSARSESMDHNML-RFRN 131
                P MCAAD++FF+G +LPL +S+SSD++    H        RSES+DH  L RF +
Sbjct: 75  CLSTKPEMCAADEVFFKGQILPLCVSISSDSSLIWCHRQDSQNKPRSESIDHGSLSRFTS 134

Query: 132 GSSSSSNSSR--SHYSRCSSISN--------NSISIPTNSKPRTQNNVFHSHPSPTPQIR 191
            +SSS +SS   SHYS  SS S         NSI+  + S P    N F++HPSP PQIR
Sbjct: 135 VTSSSRSSSTGSSHYSTNSSNSTTVTAATSFNSIT-SSKSNPNKSINNFNTHPSPKPQIR 194

Query: 192 SFSTF--------GRRSSSRWDFFRVGLLRTPGMELHDLKTRTTN--------------- 251
              T          + SSS WDFFR+GL+R P +E H+LK RT N               
Sbjct: 195 LSKTRPMNISSSRNQTSSSVWDFFRLGLVRAPELEFHELKIRTNNNNNPSRNSVSRNSSC 254

Query: 252 -GAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIPAAKKIKNWSGNIVKKRNEKGKGI--GI 298
             +  + +   G   +G F G       V+T+P   KI      ++KK++EK K +    
Sbjct: 255 SSSNSQLDSIKGFLRKGLFSGCKCSVNVVETVP-LNKIAVIKSMMIKKKSEKEKAMFQAA 314

[Close]

BLAST of CmaCh02G005090 vs. TrEMBL
Match: A0A0A0KJN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G493900 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 131/350 (37.43%), Postives = 178/350 (50.86%), Query Frame = 1


Query: 18  EEEEEEEEALSMCDLP---VKEKQQPLLLDENP---------ITEDFDFNHW-------- 77
           EE +E +E+LS+CDLP   VK+     LL+  P           ++FDF           
Sbjct: 20  EEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAADDEFDFGSLGGFSNLAD 79

Query: 78  -PPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSS 137
            PPP MC AD++F+QG LLP+RLSVSSDNT    + + L              R+ +SS 
Sbjct: 80  QPPPEMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRHL--------------RSINSSG 139

Query: 138 SNSSRSHYSRCSSISNNSISIPTNSK-PRTQ-NNVFHSHPSPTPQI-------RSFSTFG 197
           S+SSRS  S  SS++NNS++I + ++ P+ +  N+FHSHPSP PQI       R  ST G
Sbjct: 140 SSSSRSQCS-SSSVTNNSLTITSAARNPQLRVPNLFHSHPSPKPQIKASPMTFRQASTGG 199

Query: 198 RR--SSSRWDFFRVGLLRTPGMELHDLK-----------TRTTNGAAFEAEP-------- 257
            R  SS  WDFFR+G+++TPGMEL DLK           +R+ +  AF   P        
Sbjct: 200 NRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKAFVPAPLSNERSVK 259

Query: 258 ----------TVGQKTRGTFLGVVSCKKSVDT--IPAAKKI---------KNWSGNIVKK 296
                      + +K+RG  LG V CK SV++   PA K +         KN       K
Sbjct: 260 VMMRKPRESVLIERKSRG-ILGGVGCKCSVESTVAPAPKAMVGVRRKGNSKNIPAQATAK 319

[Close]

BLAST of CmaCh02G005090 vs. TrEMBL
Match: A0A0D2RFS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G028600 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-31
Identity = 121/321 (37.69%), Postives = 164/321 (51.09%), Query Frame = 1


Query: 13  QDEEDEEEEEEEEALSMCDLPVKEKQQPLLLDEN----PITEDFDFNHWP--------PP 72
           +++ + E+EE+EEALS+CDLPV   ++  L +E        EDF+F  WP         P
Sbjct: 5   EEKREVEDEEQEEALSLCDLPVNLIEEKELKNEENGEPSQEEDFNFGSWPGHGGSFRSEP 64

Query: 73  PMCAADDIFFQGHLLPLRLSVSSD----NTHNHFFSKPLSARSESMDHNMLRFRNGSSSS 132
            MC AD++FFQG +LPLR SVSSD       +H  S+ LS RSESMDH  L      SSS
Sbjct: 65  EMCVADEVFFQGQILPLRHSVSSDTGFRRHDSHNMSRSLS-RSESMDHGSLSRFTSVSSS 124

Query: 133 SNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFG----RRSSS 192
           S  S SHYS  S+ S + + I  N         F++HPSP PQIRS  T      +RSSS
Sbjct: 125 STRSSSHYSTSSTNSKSGMKIRNN---------FNTHPSPKPQIRSTRTAVNSRIQRSSS 184

Query: 193 RWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIPAA 252
            WDFF++GL+R P + L DLK +  N  +     +       +   +V+   S  T   +
Sbjct: 185 MWDFFKIGLVRAPELGLQDLKMKPRNKNSVSRNSSCNSSNSSSSTKLVNNGSS--TAEVS 244

Query: 253 KKIKNWSGNIVKKRNEKGKGIGIREN-----ELNDNVEIREKEKEKAT------------ 294
           K  +  +  +V+KR     G     N      LN+N  I+  +K+K T            
Sbjct: 245 KNQQESNKGLVEKRMGLFSGCTCSVNAVETVPLNNNNNIKNSDKDKTTSHAAAAIEDKKK 304

[Close]

BLAST of CmaCh02G005090 vs. TrEMBL
Match: K7K4N7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G191400 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-30
Identity = 123/332 (37.05%), Postives = 171/332 (51.51%), Query Frame = 1


Query: 6   HGDEHDNQDEEDEEEEEEEEALSMCDLPVK----EKQQPLLLDENPIT---EDFDFNHWP 65
           H  E + ++EE+EEEE E EALS+CDLPV     E Q     D   I    EDFDF  W 
Sbjct: 13  HLKEEEEEEEEEEEEEAEIEALSLCDLPVNLVDHEVQSKAKPDSQIIEAQEEDFDFRLWG 72

Query: 66  PP-----PMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLR-FRNG 125
            P      MCAAD++FFQG +LPL LS+                R ES+DH  +R FR+ 
Sbjct: 73  GPFSTESEMCAADEVFFQGQILPLHLSLK---------------RCESLDHVSVREFRSN 132

Query: 126 SSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQN-NVFHSHPSPTPQIR-------SFS 185
           SS SS+S RS  S  SS S  + + P  SKPR QN N FH+HPSP PQ++       SFS
Sbjct: 133 SSRSSSSIRSQNSSSSSCST-ATTTPRISKPRLQNQNHFHAHPSPQPQLKVTVPRQTSFS 192

Query: 186 TFGRRSSSRWDFFRVGLLRTPGMELHDLKTRTTNGAA---FEAEPTVG-QKTRGTFLGVV 245
             GR+SS+ WDFFR+G++  P + L DLK R+TNG +        ++G   +     G V
Sbjct: 193 NHGRKSSA-WDFFRLGVVPAPEIALQDLKVRSTNGVSKNHMGRSTSIGSNNSNANANGSV 252

Query: 246 SCKKSVDTIPAAKKIKN-WSG------------NIVKKRNEKGKGIGIRENELNDNVEIR 300
               S +     KK    WSG             ++K   +        + ++ +    +
Sbjct: 253 KTSYSGNKNQVFKKFGGFWSGCKCSVETVQSGMAMIKGGIKSANTTHATKEKVIERKRQK 312

[Close]

BLAST of CmaCh02G005090 vs. TAIR10
Match: AT5G67350.1 (AT5G67350.1 unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14
Identity = 94/308 (30.52%), Postives = 137/308 (44.48%), Query Frame = 1


Query: 13  QDEEDEEEEEEEEALSMCDLPVKEKQQPLLLDENPITEDFDFNHW-------------PP 72
           +D++D EEEEEEEALS+CDLP ++ +   ++ E     D  F                P 
Sbjct: 21  EDDDDVEEEEEEEALSLCDLPNEKGELRSIVKEEDEEFDSGFEFGIGSSFRAGSDSCEPA 80

Query: 73  PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSNS 132
           P M  AD++FF+G +LPLR SVS D   N      L  RSES++      R G   S   
Sbjct: 81  PEMSTADELFFKGRILPLRHSVSLDAGLNE--PTRLITRSESVEFR----RTGIIRSDR- 140

Query: 133 SRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRR--------SS 192
                     I NN I               +S PSP PQIR  S+   R        SS
Sbjct: 141 ---------KIKNNFID--------------YSQPSPQPQIRRSSSMTARVNSIRNPKSS 200

Query: 193 SRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIPA 252
           S WDF R+GL+RTP +EL     RTT G    A+ +V + +  +     S  K + +  +
Sbjct: 201 SIWDFLRLGLVRTPEIEL-----RTTAG---NAKLSVSRNSSCSSTSTSSNSKKIGSGES 260

Query: 253 AKKIKNWS-------GNIVKKRNEKGKGIGIRENELNDNVEIREK---EKEKATRLSHRR 290
             + +  S        ++  +       I +   E  +   + EK   +KE+ + ++ +R
Sbjct: 261 RSRNRRRSFMFSDCKCSVSTETKMAPVKIKVSSGETEEKQRMMEKKTAKKEEKSAMARKR 290

[Close]

BLAST of CmaCh02G005090 vs. NCBI nr
Match: gi|778669884|ref|XP_011649316.1| (PREDICTED: homeobox protein 6-like [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81
Identity = 191/310 (61.61%), Postives = 223/310 (71.94%), Query Frame = 1


Query: 6   HGDEHDNQ---------DEEDEEEEEEEEALSMCDLPVKEKQQPLLLDENPITE---DFD 65
           HGDE   +         D++DEEEEEEEEALS+CDLPVKEKQQP       + E   DFD
Sbjct: 10  HGDERCEEEDKEETQIDDDDDEEEEEEEEALSLCDLPVKEKQQPTRSVSTTVVETDQDFD 69

Query: 66  FNHW--PPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFR 125
           FNHW  PP PM  ADD+FFQGH+LPLRLS SS+N+ N+  +  L  RSESMD +NMLRFR
Sbjct: 70  FNHWRPPPSPMLTADDLFFQGHMLPLRLSFSSENSQNN--NGNLWCRSESMDGNNMLRFR 129

Query: 126 NGSSSSSNSSRSHYSRCSSISNNSISIPTNSKPR-TQNNVFHSHPSPTPQIRSFSTFGRR 185
           N S+SSS SSRSHYSR SS+SNNSISIPTNSKPR + NNVFHSHPSPTPQIRSFST   R
Sbjct: 130 NESTSSS-SSRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSHR 189

Query: 186 S--SSRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVD 245
           S  SSRW+FFR+GLLRTPGMELHDLKTRTT         +   KT  + LGVVSCK+SV+
Sbjct: 190 SRSSSRWEFFRLGLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGVVSCKRSVE 249

Query: 246 TIPAAKKIKNWSGNIVKKRNEKGKGIGIRENELNDNVEIREKEKEKATRLSHRRTFEWLK 298
           T+P        S N +++ N        ++N  ++ VEIREKEKEK  R+SHRRTFEWLK
Sbjct: 250 TVPTT----TGSKNRIRRENVLENN---KKNNDDNKVEIREKEKEKERRVSHRRTFEWLK 309

[Close]

BLAST of CmaCh02G005090 vs. NCBI nr
Match: gi|659115855|ref|XP_008457772.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 3.8e-77
Identity = 189/309 (61.17%), Postives = 224/309 (72.49%), Query Frame = 1


Query: 6   HGDEHDNQDEE------DEEEEEEEEALSMCDLPVKEKQQPLLLDENPI--TEDFDFNHW 65
           HGDE   ++E+      D++++EEEEALS+CDLPVKEKQQP       I  TEDFDFN+W
Sbjct: 10  HGDERSCEEEDKEETQIDDDDDEEEEALSLCDLPVKEKQQPTRSVSATIVETEDFDFNNW 69

Query: 66  --PPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFRNGSS 125
             PP PM  ADD+FFQGH+LPLRLS SS+N+ N+  +  L +RSESMD +NMLRFRNGS+
Sbjct: 70  RPPPSPMLTADDLFFQGHMLPLRLSFSSENSQNN--NGNLWSRSESMDRNNMLRFRNGST 129

Query: 126 SSSNSSRSHYSRCSSISNNSISIP-TNSKPR-TQNNVFHSHPSPTPQIRSFSTFGR--RS 185
           SSS SSRSHYSR SS+SNNSISIP TN+KPR + NNVFHSHPSPTPQIRSFST     RS
Sbjct: 130 SSS-SSRSHYSRSSSLSNNSISIPTTNTKPRPSNNNVFHSHPSPTPQIRSFSTSSHRSRS 189

Query: 186 SSRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIP 245
           SSRW+FFR+GLLRTPGMELHDLKTRTT             KT  + LGVVSCK+SVDT+P
Sbjct: 190 SSRWEFFRLGLLRTPGMELHDLKTRTTTTT---TTTMTTHKTTASILGVVSCKRSVDTVP 249

Query: 246 AAKKIKNWSGNIVKKRNEKGKGIGIRENELNDNVEIR--EKEKEKATRLSHRRTFEWLKQ 298
                 N   N +++ N       + +   N+ VEIR  EKEKEK  R+SHRRTFEWLKQ
Sbjct: 250 TTTGSSN---NRIRREN-------VLKKNNNNKVEIREKEKEKEKERRVSHRRTFEWLKQ 302

[Close]

BLAST of CmaCh02G005090 vs. NCBI nr
Match: gi|823206427|ref|XP_012437092.1| (PREDICTED: uncharacterized protein LOC105763405 [Gossypium raimondii])

HSP 1 Score: 148.3 bits (373), Expect = 2.2e-32
Identity = 137/344 (39.83%), Postives = 180/344 (52.33%), Query Frame = 1


Query: 12  NQDEED--EEEEEEEEALSMCDLPV---KEKQQPLLLDENP-------ITEDFDFNHWP- 71
           N DEE   E EEEEEEALS+CDLPV   KE+ Q    +E           EDF+F  W  
Sbjct: 15  NCDEEQKCEAEEEEEEALSLCDLPVNLIKEENQIQPRNEEDGESQAIKTEEDFNFGSWDG 74

Query: 72  ----PPPMCAADDIFFQGHLLPLRLSVSSDNT--HNHFFSKPLSARSESMDHNML-RFRN 131
                P MCAAD++FF+G +LPL +S+SSD++    H        RSES+DH  L RF +
Sbjct: 75  CLSTKPEMCAADEVFFKGQILPLCVSISSDSSLIWCHRQDSQNKPRSESIDHGSLSRFTS 134

Query: 132 GSSSSSNSSR--SHYSRCSSISN--------NSISIPTNSKPRTQNNVFHSHPSPTPQIR 191
            +SSS +SS   SHYS  SS S         NSI+  + S P    N F++HPSP PQIR
Sbjct: 135 VTSSSRSSSTGSSHYSTNSSNSTTVTAATSFNSIT-SSKSNPNKSINNFNTHPSPKPQIR 194

Query: 192 SFSTF--------GRRSSSRWDFFRVGLLRTPGMELHDLKTRTTN--------------- 251
              T          + SSS WDFFR+GL+R P +E H+LK RT N               
Sbjct: 195 LSKTRPMNISSSRNQTSSSVWDFFRLGLVRAPELEFHELKIRTNNNNNPSRNSVSRNSSC 254

Query: 252 -GAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIPAAKKIKNWSGNIVKKRNEKGKGI--GI 298
             +  + +   G   +G F G       V+T+P   KI      ++KK++EK K +    
Sbjct: 255 SSSNSQLDSIKGFLRKGLFSGCKCSVNVVETVP-LNKIAVIKSMMIKKKSEKEKAMFQAA 314

[Close]

BLAST of CmaCh02G005090 vs. NCBI nr
Match: gi|700193378|gb|KGN48582.1| (hypothetical protein Csa_6G493900 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 131/350 (37.43%), Postives = 178/350 (50.86%), Query Frame = 1


Query: 18  EEEEEEEEALSMCDLP---VKEKQQPLLLDENP---------ITEDFDFNHW-------- 77
           EE +E +E+LS+CDLP   VK+     LL+  P           ++FDF           
Sbjct: 20  EEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAADDEFDFGSLGGFSNLAD 79

Query: 78  -PPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSS 137
            PPP MC AD++F+QG LLP+RLSVSSDNT    + + L              R+ +SS 
Sbjct: 80  QPPPEMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRHL--------------RSINSSG 139

Query: 138 SNSSRSHYSRCSSISNNSISIPTNSK-PRTQ-NNVFHSHPSPTPQI-------RSFSTFG 197
           S+SSRS  S  SS++NNS++I + ++ P+ +  N+FHSHPSP PQI       R  ST G
Sbjct: 140 SSSSRSQCS-SSSVTNNSLTITSAARNPQLRVPNLFHSHPSPKPQIKASPMTFRQASTGG 199

Query: 198 RR--SSSRWDFFRVGLLRTPGMELHDLK-----------TRTTNGAAFEAEP-------- 257
            R  SS  WDFFR+G+++TPGMEL DLK           +R+ +  AF   P        
Sbjct: 200 NRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKAFVPAPLSNERSVK 259

Query: 258 ----------TVGQKTRGTFLGVVSCKKSVDT--IPAAKKI---------KNWSGNIVKK 296
                      + +K+RG  LG V CK SV++   PA K +         KN       K
Sbjct: 260 VMMRKPRESVLIERKSRG-ILGGVGCKCSVESTVAPAPKAMVGVRRKGNSKNIPAQATAK 319

[Close]

BLAST of CmaCh02G005090 vs. NCBI nr
Match: gi|778722421|ref|XP_011658482.1| (PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 131/350 (37.43%), Postives = 178/350 (50.86%), Query Frame = 1


Query: 18  EEEEEEEEALSMCDLP---VKEKQQPLLLDENP---------ITEDFDFNHW-------- 77
           EE +E +E+LS+CDLP   VK+     LL+  P           ++FDF           
Sbjct: 18  EEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAADDEFDFGSLGGFSNLAD 77

Query: 78  -PPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSS 137
            PPP MC AD++F+QG LLP+RLSVSSDNT    + + L              R+ +SS 
Sbjct: 78  QPPPEMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRHL--------------RSINSSG 137

Query: 138 SNSSRSHYSRCSSISNNSISIPTNSK-PRTQ-NNVFHSHPSPTPQI-------RSFSTFG 197
           S+SSRS  S  SS++NNS++I + ++ P+ +  N+FHSHPSP PQI       R  ST G
Sbjct: 138 SSSSRSQCS-SSSVTNNSLTITSAARNPQLRVPNLFHSHPSPKPQIKASPMTFRQASTGG 197

Query: 198 RR--SSSRWDFFRVGLLRTPGMELHDLK-----------TRTTNGAAFEAEP-------- 257
            R  SS  WDFFR+G+++TPGMEL DLK           +R+ +  AF   P        
Sbjct: 198 NRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKAFVPAPLSNERSVK 257

Query: 258 ----------TVGQKTRGTFLGVVSCKKSVDT--IPAAKKI---------KNWSGNIVKK 296
                      + +K+RG  LG V CK SV++   PA K +         KN       K
Sbjct: 258 VMMRKPRESVLIERKSRG-ILGGVGCKCSVESTVAPAPKAMVGVRRKGNSKNIPAQATAK 317

The following BLAST results are available for this feature:

BLAST of CmaCh02G005090 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh02G005090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPT6_CUCSA	7.9e-82	61.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277620 PE=4 SV=1	[more]
A0A0D2PQT2_GOSRA	1.5e-32	39.83	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G080000 PE=4 SV=1	[more]
A0A0A0KJN1_CUCSA	1.3e-31	37.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G493900 PE=4 SV=1	[more]
A0A0D2RFS0_GOSRA	1.7e-31	37.69	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G028600 PE=4 SV=1	[more]
K7K4N7_SOYBN	2.4e-30	37.05	Uncharacterized protein OS=Glycine max GN=GLYMA_01G191400 PE=4 SV=1	[more]

BLAST of CmaCh02G005090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67350.1	2.2e-14	30.52	unknown protein	[more]

BLAST of CmaCh02G005090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669884\|ref\|XP_011649316.1\|	1.1e-81	61.61	PREDICTED: homeobox protein 6-like [Cucumis sativus]	[more]
gi\|659115855\|ref\|XP_008457772.1\|	3.8e-77	61.17	PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis me...	[more]
gi\|823206427\|ref\|XP_012437092.1\|	2.2e-32	39.83	PREDICTED: uncharacterized protein LOC105763405 [Gossypium raimondii]	[more]
gi\|700193378\|gb\|KGN48582.1\|	1.8e-31	37.43	hypothetical protein Csa_6G493900 [Cucumis sativus]	[more]
gi\|778722421\|ref\|XP_011658482.1\|	1.8e-31	37.43	PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G005090.1	CmaCh02G005090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 257..277 score: -coord: 5..25 scor
None	No IPR available	PANTHER	PTHR33922	FAMILY NOT NAMED	coord: 1..300 score: 1.3
None	No IPR available	PANTHER	PTHR33922:SF2	SUBFAMILY NOT NAMED	coord: 1..300 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G005090	CmoCh02G005200	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G005090	Cp4.1LG05g11710	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G005090	CsGy6G028110	Cucumber (Gy14) v2	cgybcmaB816
CmaCh02G005090	Carg25146	Silver-seed gourd	carcmaB0573

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G005090	Melon (DHL92) v3.6.1	cmamedB618
CmaCh02G005090	Cucumber (Chinese Long) v3	cmacucB0703
CmaCh02G005090	Cucumber (Chinese Long) v3	cmacucB0705
CmaCh02G005090	Cucumber (Chinese Long) v3	cmacucB0748
CmaCh02G005090	Watermelon (97103) v2	cmawmbB635
CmaCh02G005090	Wax gourd	cmawgoB0768
CmaCh02G005090	Wax gourd	cmawgoB0752
CmaCh02G005090	Wax gourd	cmawgoB0759
CmaCh02G005090	Cucurbita maxima (Rimu)	cmacmaB469
CmaCh02G005090	Cucumber (Gy14) v1	cgycmaB0228
CmaCh02G005090	Cucumber (Gy14) v1	cgycmaB0118
CmaCh02G005090	Cucumber (Gy14) v1	cgycmaB1018
CmaCh02G005090	Cucurbita moschata (Rifu)	cmacmoB606
CmaCh02G005090	Wild cucumber (PI 183967)	cmacpiB587
CmaCh02G005090	Wild cucumber (PI 183967)	cmacpiB595
CmaCh02G005090	Wild cucumber (PI 183967)	cmacpiB631
CmaCh02G005090	Cucumber (Chinese Long) v2	cmacuB582
CmaCh02G005090	Cucumber (Chinese Long) v2	cmacuB590
CmaCh02G005090	Cucumber (Chinese Long) v2	cmacuB626
CmaCh02G005090	Melon (DHL92) v3.5.1	cmameB534
CmaCh02G005090	Melon (DHL92) v3.5.1	cmameB538
CmaCh02G005090	Melon (DHL92) v3.5.1	cmameB584
CmaCh02G005090	Watermelon (Charleston Gray)	cmawcgB520
CmaCh02G005090	Watermelon (Charleston Gray)	cmawcgB530
CmaCh02G005090	Watermelon (Charleston Gray)	cmawcgB545
CmaCh02G005090	Watermelon (97103) v1	cmawmB570
CmaCh02G005090	Watermelon (97103) v1	cmawmB596
CmaCh02G005090	Cucurbita pepo (Zucchini)	cmacpeB626
CmaCh02G005090	Bottle gourd (USVL1VR-Ls)	cmalsiB552
CmaCh02G005090	Bottle gourd (USVL1VR-Ls)	cmalsiB567
CmaCh02G005090	Cucumber (Gy14) v2	cgybcmaB231
CmaCh02G005090	Cucumber (Gy14) v2	cgybcmaB233