CmoCh01G011260 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCCACTCTTCCAACCAACCGATCGACAAGAATTTCATGTTCCTTCTCTGCAACGGTCTCCTCGTTTTTCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCACTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGAGGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAAAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGAGAATGACGATGCGTTGAGCAATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATTAA ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCCACTCTTCCAACCAACCGATCGACAAGAATTTCATGTTCCTTCTCTGCAACGGTCTCCTCGTTTTTCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCACTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGAGGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAAAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGAGAATGACGATGCGTTGAGCAATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATTAA ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCCACTCTTCCAACCAACCGATCGACAAGAATTTCATGTTCCTTCTCTGCAACGGTCTCCTCGTTTTTCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCACTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGAGGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAAAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGAGAATGACGATGCGTTGAGCAATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATTAA
BLAST of CmoCh01G011260 vs. TrEMBL
Match: A0A0A0K300_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G098730 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23 Identity = 84/180 (46.67%), Postives = 105/180 (58.33%), Query Frame = 1
BLAST of CmoCh01G011260 vs. TrEMBL
Match: A0A0D2U4Y7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449400 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 9.6e-14 Identity = 68/196 (34.69%), Postives = 103/196 (52.55%), Query Frame = 1
BLAST of CmoCh01G011260 vs. TrEMBL
Match: F6I542_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00270 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 8.1e-13 Identity = 72/207 (34.78%), Postives = 110/207 (53.14%), Query Frame = 1
BLAST of CmoCh01G011260 vs. TrEMBL
Match: A0A0D2QYQ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449600 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11 Identity = 74/218 (33.94%), Postives = 108/218 (49.54%), Query Frame = 1
BLAST of CmoCh01G011260 vs. TrEMBL
Match: A5ASY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041931 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 9.9e-11 Identity = 71/207 (34.30%), Postives = 110/207 (53.14%), Query Frame = 1
BLAST of CmoCh01G011260 vs. TAIR10
Match: AT3G13130.1 (AT3G13130.1 unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09 Identity = 62/200 (31.00%), Postives = 101/200 (50.50%), Query Frame = 1
BLAST of CmoCh01G011260 vs. NCBI nr
Match: gi|659126056|ref|XP_008462992.1| (PREDICTED: bromo and FHA domain-containing protein DDB_G0267958 isoform X1 [Cucumis melo]) HSP 1 Score: 120.9 bits (302), Expect = 2.3e-24 Identity = 91/185 (49.19%), Postives = 110/185 (59.46%), Query Frame = 1
BLAST of CmoCh01G011260 vs. NCBI nr
Match: gi|659126058|ref|XP_008462993.1| (PREDICTED: uncharacterized protein LOC103501239 isoform X2 [Cucumis melo]) HSP 1 Score: 119.0 bits (297), Expect = 8.6e-24 Identity = 87/183 (47.54%), Postives = 108/183 (59.02%), Query Frame = 1
BLAST of CmoCh01G011260 vs. NCBI nr
Match: gi|700188772|gb|KGN44005.1| (hypothetical protein Csa_7G098730 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23 Identity = 84/180 (46.67%), Postives = 105/180 (58.33%), Query Frame = 1
BLAST of CmoCh01G011260 vs. NCBI nr
Match: gi|763796020|gb|KJB63016.1| (hypothetical protein B456_009G449400 [Gossypium raimondii]) HSP 1 Score: 85.1 bits (209), Expect = 1.4e-13 Identity = 68/196 (34.69%), Postives = 103/196 (52.55%), Query Frame = 1
BLAST of CmoCh01G011260 vs. NCBI nr
Match: gi|823222514|ref|XP_012443974.1| (PREDICTED: histone acetyltransferase KAT6B-like isoform X6 [Gossypium raimondii]) HSP 1 Score: 82.4 bits (202), Expect = 8.9e-13 Identity = 70/201 (34.83%), Postives = 102/201 (50.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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