CmaCh01G010800 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G010800
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr01 : 7966600 .. 7967148 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACCAAAACAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCGACTCTTCCAACCAACCAATCGACAAGAACTTCATGTTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCAGGTCTATTCAAATCTCTCTCCACTTCCCAACCAAATTACGACGCATTCAGTGTCTATGAGCTCGACTCTTTGTCACCTCCAACGATGTTGGAGGACGAGAAACAAACAACAGTGTCTACAACAACAATAACAACAACACGAGAAAAGAACGATGAGTCAGAAGAAAAAACCATTTCGATTTCAGAAATTGGCGACGATGAAGTTGAAGAAGACGACGATAGAACAGGTGATGAAGAAGGGAATGACGACGCGTTGAACGATGAAGAACTTAACAGAAAATTCGACGAATTTATCAAAAGAATGAAGGAAGAAATCATAGATGATGCTCAAAAGACTCTAGTAGTAGTTTAA

mRNA sequence

ATGGCCGACCAAAACAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCGACTCTTCCAACCAACCAATCGACAAGAACTTCATGTTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCAGGTCTATTCAAATCTCTCTCCACTTCCCAACCAAATTACGACGCATTCAGTGTCTATGAGCTCGACTCTTTGTCACCTCCAACGATGTTGGAGGACGAGAAACAAACAACAGTGTCTACAACAACAATAACAACAACACGAGAAAAGAACGATGAGTCAGAAGAAAAAACCATTTCGATTTCAGAAATTGGCGACGATGAAGTTGAAGAAGACGACGATAGAACAGGTGATGAAGAAGGGAATGACGACGCGTTGAACGATGAAGAACTTAACAGAAAATTCGACGAATTTATCAAAAGAATGAAGGAAGAAATCATAGATGATGCTCAAAAGACTCTAGTAGTAGTTTAA

Coding sequence (CDS)

ATGGCCGACCAAAACAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCGACTCTTCCAACCAACCAATCGACAAGAACTTCATGTTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCAGGTCTATTCAAATCTCTCTCCACTTCCCAACCAAATTACGACGCATTCAGTGTCTATGAGCTCGACTCTTTGTCACCTCCAACGATGTTGGAGGACGAGAAACAAACAACAGTGTCTACAACAACAATAACAACAACACGAGAAAAGAACGATGAGTCAGAAGAAAAAACCATTTCGATTTCAGAAATTGGCGACGATGAAGTTGAAGAAGACGACGATAGAACAGGTGATGAAGAAGGGAATGACGACGCGTTGAACGATGAAGAACTTAACAGAAAATTCGACGAATTTATCAAAAGAATGAAGGAAGAAATCATAGATGATGCTCAAAAGACTCTAGTAGTAGTTTAA

Protein sequence

MADQNNNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILDSSNQPIDKNFMFLLCNGLLVFLAKYSGLFKSLSTSQPNYDAFSVYELDSLSPPTMLEDEKQTTVSTTTITTTREKNDESEEKTISISEIGDDEVEEDDDRTGDEEGNDDALNDEELNRKFDEFIKRMKEEIIDDAQKTLVVV

Homology

[Close]

BLAST of CmaCh01G010800 vs. TrEMBL
Match: A0A0A0K300_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G098730 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.8e-24
Identity = 92/192 (47.92%), Postives = 121/192 (63.02%), Query Frame = 1


Query: 6   NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILDSSNQPIDKNFMFLLCNGLLVFLAKY 65
           ++QTL+KVTKLLFSISL SFF T   + FH       NQPIDKN MFLLCN LLVFLA Y
Sbjct: 27  SHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANY 86

Query: 66  SGLFKSLSTSQPNYD-------AFSVYELDSLSPPTML-----EDEKQTTVSTTTITTTR 125
           SGLFKSLS+S  +          F  + LD L  P+ +     E++K   +        +
Sbjct: 87  SGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQ 146

Query: 126 EKNDESEEKTISISEIGD--DEVEEDDDRTGDEEGNDDALNDEELNRKFDEFIKRMKEEI 183
           ++  E   +T+  SE G+  + ++E+++   ++E N   ++DEELNRKFDEFIKRMKEEI
Sbjct: 147 QQQAEVLGETLFGSETGELVEMIQEEEE---EDEENCGVMSDEELNRKFDEFIKRMKEEI 206

[Close]

BLAST of CmaCh01G010800 vs. TrEMBL
Match: F6I542_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00270 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-12
Identity = 68/205 (33.17%), Postives = 111/205 (54.15%), Query Frame = 1


Query: 1   MADQNNNQTLQKVTKLLFSISLLSFFFTLPSWL-FHSPILDSSNQP-------IDKNFMF 60
           +++   +Q L+KV +LL S+S+ SFFF+  +WL F S   + S+ P       I++N +F
Sbjct: 12  LSEFTKSQFLKKVAQLLLSVSVFSFFFSYSTWLSFLSHSFNLSSFPFQLLTHTINRNCIF 71

Query: 61  LLCNGLLVFLAKYSGLFKSLSTSQPNYDAFSVYELDSLSPPTMLEDEKQTTVSTTTITTT 120
           LLCNG+LVFLA+ SGL +S S+   + D + + +     P  +L D++ TT +T    + 
Sbjct: 72  LLCNGILVFLARNSGLIRSSSSGFDHADEYLIKKTGDRLP--LLLDKEATTETTEPPESA 131

Query: 121 REKNDESEEKTISISEIGDDEVEEDDDRTGD--------------------------EEG 172
            +  +E ++K     E  ++ +EED+++  D                          EE 
Sbjct: 132 ADDQEERDKKYFFKEEETENLIEEDEEQEVDHGTSLLEDENPKKSSLESSLFIAEEEEEE 191

[Close]

BLAST of CmaCh01G010800 vs. TrEMBL
Match: A5ASY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041931 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11
Identity = 68/205 (33.17%), Postives = 110/205 (53.66%), Query Frame = 1


Query: 1   MADQNNNQTLQKVTKLLFSISLLSFFFTLPSWL-FHSPILDSSNQP-------IDKNFMF 60
           +++   +Q L+KV +LL S+S+ SFFF+  +WL F S   + S+ P       I++N +F
Sbjct: 12  LSEFTKSQFLKKVAQLLLSVSVFSFFFSYSTWLSFLSHSFNLSSFPFQLLTHTINRNCIF 71

Query: 61  LLCNGLLVFLAKYSGLFKSLSTSQPNYDAFSVYELDSLSPPTMLEDEKQTTVSTTTITTT 120
           LLCNG+LVFLA+ SGL  S S+   + D + + +     P  +L D++ TT +T    + 
Sbjct: 72  LLCNGILVFLARNSGLIISSSSGFDHADEYLIKKTGDRLP--LLLDKEATTETTEPPESA 131

Query: 121 REKNDESEEKTISISEIGDDEVEEDDDRTGD--------------------------EEG 172
            +  +E ++K     E  ++ +EED+++  D                          EE 
Sbjct: 132 ADDQEERDKKYFFKEEETENLIEEDEEQEVDHGTSLLEDENPKKSSLESSLFIEEEEEEE 191

[Close]

BLAST of CmaCh01G010800 vs. TrEMBL
Match: A0A0D2QYQ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449600 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-11
Identity = 74/214 (34.58%), Postives = 112/214 (52.34%), Query Frame = 1


Query: 11  QKVTKLLFSISLLSFFFTLP---------SWLFHSPI-LDSSNQPIDKNFMFLLCNGLLV 70
           + +T+LL S+S+ S FF+           S+ FH+ +     +  IDKNF+FLLCNGLLV
Sbjct: 24  RNLTQLLLSVSIFSLFFSHSYCLSLFHSFSFTFHNTLAFKFISHNIDKNFIFLLCNGLLV 83

Query: 71  FLAKYSGLFKS------LSTSQPNYDAFSVY---------ELDSLSPPTMLEDEK----- 130
           FLAK+SGL  S      LS    N+ +F  Y          LD+ +P   LE E+     
Sbjct: 84  FLAKFSGLISSSSQQSNLSDDHYNHQSFKSYTYIPQTESTRLDTSTPLLELEKEENAGFV 143

Query: 131 ----------QTTVSTTTITTTREKNDESEEKTISISEIGDDEVEEDDDRTGDE--EGND 183
                     +  V     + T E  +E EE+    ++I + E  E ++   +E  EGN 
Sbjct: 144 EGEEKGSSIDEPFVEDNEESETYEPEEEEEEEEEEEADIEESETYEPEEEEEEELMEGN- 203

[Close]

BLAST of CmaCh01G010800 vs. TrEMBL
Match: A0A0D2U4X6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449500 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.4e-10
Identity = 61/182 (33.52%), Postives = 98/182 (53.85%), Query Frame = 1


Query: 4   QNNNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILDSS----------NQPIDKNFMFL 63
           Q+ +Q  +K+T+LL S+S+ S FF+    LFHS  L+S+          +  I+KNF+FL
Sbjct: 11  QSLSQFHRKLTRLLLSVSIFSLFFSHS--LFHS--LNSTFHDTLAFKFLSHNIEKNFIFL 70

Query: 64  LCNGLLVFLAKYSGLFKSLSTSQPNYDAFSVYELDSLSPPTMLEDEKQTTVSTTTITTTR 123
           LCNGLLVFLAK+SGL  S S    ++ +F  YE  + +  T L+ +        T    +
Sbjct: 71  LCNGLLVFLAKFSGLISSSSKHNNDHQSFKSYEYVTQTESTSLDPK--------TPLLEK 130

Query: 124 EKNDESEEKTISISEIGDDEVEEDDDRTGDEEGNDDALNDEELNRKFDEFIKRMKEEIID 176
           E+N   +E+ +  + + +  VEE                   +N++FDEFI+++KEE+  
Sbjct: 131 EENAGLDEEELKRASVDEPFVEE-------------------MNKRFDEFIRKVKEELST 161

[Close]

BLAST of CmaCh01G010800 vs. TAIR10
Match: AT3G13130.1 (AT3G13130.1 unknown protein)

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09
Identity = 59/200 (29.50%), Postives = 103/200 (51.50%), Query Frame = 1


Query: 3   DQNNNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILDSSNQPIDKNFMFLLCNGLLVFL 62
           DQ   + L+K+TK +     +    T   +  +  ++      +DKN+MFLLCNGL+V +
Sbjct: 2   DQIKPEFLKKLTKFIAVSMWILSLLTSHDFYLYRFMIQLVTHAVDKNYMFLLCNGLVVVV 61

Query: 63  AKYSGLF---KSLSTSQPNYD-AFSVYELDSLSPPTMLEDEKQTTVSTTTI--------- 122
           AK SGL    K +     N D  F   + +S +    LE +    + T +          
Sbjct: 62  AKCSGLVASSKPIEKIWSNTDKTFDYGDFESYTTILELEYKSDHGIGTESFLAEEVTVEE 121

Query: 123 TTTREKNDESEEKTISISEIGDDEVEEDDDRTG-----DEEGNDDAL--NDEELNRKFDE 182
            T  ++ +++EE+    + + D++ EE+    G     +EEGN   +   +EE+N+KFDE
Sbjct: 122 DTKHQETEDNEEEDDDDNTLADNDGEEECGLRGGSINEEEEGNVGVMTSTEEEMNKKFDE 181

[Close]

BLAST of CmaCh01G010800 vs. NCBI nr
Match: gi|659126056|ref|XP_008462992.1| (PREDICTED: bromo and FHA domain-containing protein DDB_G0267958 isoform X1 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-26
Identity = 98/194 (50.52%), Postives = 124/194 (63.92%), Query Frame = 1


Query: 6   NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILDSSNQPIDKNFMFLLCNGLLVFLAKY 65
           ++ TL+KVTKLLFS+SL SFFFT   + FH       NQPIDKN MFLLCN LLVFLA Y
Sbjct: 26  SHPTLKKVTKLLFSLSLFSFFFTNLPFHFHISS-HFFNQPIDKNSMFLLCNALLVFLANY 85

Query: 66  SGLFKSLSTSQPNYDA---FSVYELDSLSPPTMLE----DEKQTTVSTTTITTTREKNDE 125
           SGLFKSLS+S  + D    F  + LD L  P+       +EK+      T +  +++ +E
Sbjct: 86  SGLFKSLSSSPKHLDTNFRFFDFGLDLLQKPSSTHSETPEEKKDDAQQNTPSFEQQEEEE 145

Query: 126 SEEKTISISEIGD-------DEVEEDD--DRTGDEEGNDDALNDEELNRKFDEFIKRMKE 183
           +  + +  SE G+       +E EEDD  +   +EEGN   ++DEELNRKFDEFIKRMKE
Sbjct: 146 ALGERLFGSETGEVVEMIQAEEEEEDDEEEEEEEEEGNCGVMSDEELNRKFDEFIKRMKE 205

[Close]

BLAST of CmaCh01G010800 vs. NCBI nr
Match: gi|659126058|ref|XP_008462993.1| (PREDICTED: uncharacterized protein LOC103501239 isoform X2 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 5.4e-26
Identity = 95/185 (51.35%), Postives = 120/185 (64.86%), Query Frame = 1


Query: 6   NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILDSSNQPIDKNFMFLLCNGLLVFLAKY 65
           ++ TL+KVTKLLFS+SL SFFFT   + FH       NQPIDKN MFLLCN LLVFLA Y
Sbjct: 26  SHPTLKKVTKLLFSLSLFSFFFTNLPFHFHISS-HFFNQPIDKNSMFLLCNALLVFLANY 85

Query: 66  SGLFKSLSTSQPNYDA---FSVYELDSLSPPTMLE----DEKQTTVSTTTITTTREKNDE 125
           SGLFKSLS+S  + D    F  + LD L  P+       +EK+      T +  +++ +E
Sbjct: 86  SGLFKSLSSSPKHLDTNFRFFDFGLDLLQKPSSTHSETPEEKKDDAQQNTPSFEQQEEEE 145

Query: 126 SEEKTISISEIGDDEVEEDDDRTGDEEGNDDALNDEELNRKFDEFIKRMKEEII-DDAQK 183
           +  + +  SE G + VE   +   +EEGN   ++DEELNRKFDEFIKRMKEEII DDA +
Sbjct: 146 ALGERLFGSETG-EVVEMIQEEEEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPR 205

[Close]

BLAST of CmaCh01G010800 vs. NCBI nr
Match: gi|700188772|gb|KGN44005.1| (hypothetical protein Csa_7G098730 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 92/192 (47.92%), Postives = 121/192 (63.02%), Query Frame = 1


Query: 6   NNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILDSSNQPIDKNFMFLLCNGLLVFLAKY 65
           ++QTL+KVTKLLFSISL SFF T   + FH       NQPIDKN MFLLCN LLVFLA Y
Sbjct: 27  SHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANY 86

Query: 66  SGLFKSLSTSQPNYD-------AFSVYELDSLSPPTML-----EDEKQTTVSTTTITTTR 125
           SGLFKSLS+S  +          F  + LD L  P+ +     E++K   +        +
Sbjct: 87  SGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQ 146

Query: 126 EKNDESEEKTISISEIGD--DEVEEDDDRTGDEEGNDDALNDEELNRKFDEFIKRMKEEI 183
           ++  E   +T+  SE G+  + ++E+++   ++E N   ++DEELNRKFDEFIKRMKEEI
Sbjct: 147 QQQAEVLGETLFGSETGELVEMIQEEEE---EDEENCGVMSDEELNRKFDEFIKRMKEEI 206

[Close]

BLAST of CmaCh01G010800 vs. NCBI nr
Match: gi|823222514|ref|XP_012443974.1| (PREDICTED: histone acetyltransferase KAT6B-like isoform X6 [Gossypium raimondii])

HSP 1 Score: 79.3 bits (194), Expect = 7.5e-12
Identity = 75/199 (37.69%), Postives = 111/199 (55.78%), Query Frame = 1


Query: 11  QKVTKLLFSISLLSFFFTLP---------SWLFHSPI-LDSSNQPIDKNFMFLLCNGLLV 70
           + +T+LL S+S+ S FF+           S+ FH+ +     +  IDKNF+FLLCNGLLV
Sbjct: 24  RNLTQLLLSVSIFSLFFSHSYCLSLFHSFSFTFHNTLAFKFISHNIDKNFIFLLCNGLLV 83

Query: 71  FLAKYSGLFKSLSTSQPNYDAFSVYELDSLSPPTMLEDEKQTTVSTTTITTTREKND--- 130
           FLAK+SGL    S+SQ +  +   Y   S    T +   + T + T+T     EK +   
Sbjct: 84  FLAKFSGLIS--SSSQQSNLSDDHYNHQSFKSYTYIPQTESTRLDTSTPLLELEKEENAG 143

Query: 131 --ESEEKTISI----------SEIGDDEVEEDDDRTGDE--EGNDDALNDEELNRKFDEF 183
             E EEK  SI          SE  + E EE+++   +E  EGN + L+ EE+N++FDEF
Sbjct: 144 FVEGEEKGSSIDEPFVEDNEESETYEPEEEEEEEEEEEELMEGN-NVLSTEEMNKRFDEF 203

[Close]

BLAST of CmaCh01G010800 vs. NCBI nr
Match: gi|731433208|ref|XP_010644555.1| (PREDICTED: uncharacterized protein LOC104877619 [Vitis vinifera])

HSP 1 Score: 79.3 bits (194), Expect = 7.5e-12
Identity = 68/205 (33.17%), Postives = 111/205 (54.15%), Query Frame = 1


Query: 1   MADQNNNQTLQKVTKLLFSISLLSFFFTLPSWL-FHSPILDSSNQP-------IDKNFMF 60
           +++   +Q L+KV +LL S+S+ SFFF+  +WL F S   + S+ P       I++N +F
Sbjct: 12  LSEFTKSQFLKKVAQLLLSVSVFSFFFSYSTWLSFLSHSFNLSSFPFQLLTHTINRNCIF 71

Query: 61  LLCNGLLVFLAKYSGLFKSLSTSQPNYDAFSVYELDSLSPPTMLEDEKQTTVSTTTITTT 120
           LLCNG+LVFLA+ SGL +S S+   + D + + +     P  +L D++ TT +T    + 
Sbjct: 72  LLCNGILVFLARNSGLIRSSSSGFDHADEYLIKKTGDRLP--LLLDKEATTETTEPPESA 131

Query: 121 REKNDESEEKTISISEIGDDEVEEDDDRTGD--------------------------EEG 172
            +  +E ++K     E  ++ +EED+++  D                          EE 
Sbjct: 132 ADDQEERDKKYFFKEEETENLIEEDEEQEVDHGTSLLEDENPKKSSLESSLFIAEEEEEE 191

The following BLAST results are available for this feature:

BLAST of CmaCh01G010800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G010800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K300_CUCSA	7.8e-24	47.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G098730 PE=4 SV=1	[more]
F6I542_VITVI	5.2e-12	33.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00270 PE=4 SV=...	[more]
A5ASY1_VITVI	2.0e-11	33.17	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041931 PE=4 SV=1	[more]
A0A0D2QYQ2_GOSRA	4.4e-11	34.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449600 PE=4 SV=1	[more]
A0A0D2U4X6_GOSRA	6.4e-10	33.52	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449500 PE=4 SV=1	[more]

BLAST of CmaCh01G010800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13130.1	3.7e-09	29.50	unknown protein	[more]

BLAST of CmaCh01G010800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126056\|ref\|XP_008462992.1\|	1.8e-26	50.52	PREDICTED: bromo and FHA domain-containing protein DDB_G0267958 isoform X1 [Cucu...	[more]
gi\|659126058\|ref\|XP_008462993.1\|	5.4e-26	51.35	PREDICTED: uncharacterized protein LOC103501239 isoform X2 [Cucumis melo]	[more]
gi\|700188772\|gb\|KGN44005.1\|	1.1e-23	47.92	hypothetical protein Csa_7G098730 [Cucumis sativus]	[more]
gi\|823222514\|ref\|XP_012443974.1\|	7.5e-12	37.69	PREDICTED: histone acetyltransferase KAT6B-like isoform X6 [Gossypium raimondii]	[more]
gi\|731433208\|ref\|XP_010644555.1\|	7.5e-12	33.17	PREDICTED: uncharacterized protein LOC104877619 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G010800.1	CmaCh01G010800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34947	FAMILY NOT NAMED	coord: 1..182 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G010800	Csa7G098730	Cucumber (Chinese Long) v2	cmacuB498
CmaCh01G010800	MELO3C024925	Melon (DHL92) v3.5.1	cmameB401
CmaCh01G010800	CmoCh01G011260	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G010800	Cp4.1LG02g00430	Cucurbita pepo (Zucchini)	cmacpeB490
CmaCh01G010800	MELO3C024925.2	Melon (DHL92) v3.6.1	cmamedB455
CmaCh01G010800	Bhi09G001467	Wax gourd	cmawgoB0616
CmaCh01G010800	Carg22408	Silver-seed gourd	carcmaB1224
CmaCh01G010800	Carg12870	Silver-seed gourd	carcmaB1245

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G010800	Cucumber (Chinese Long) v3	cmacucB0585
CmaCh01G010800	Watermelon (97103) v2	cmawmbB514
CmaCh01G010800	Cucurbita maxima (Rimu)	cmacmaB052
CmaCh01G010800	Cucurbita moschata (Rifu)	cmacmoB436
CmaCh01G010800	Melon (DHL92) v3.5.1	cmameB395
CmaCh01G010800	Watermelon (Charleston Gray)	cmawcgB380
CmaCh01G010800	Watermelon (97103) v1	cmawmB410
CmaCh01G010800	Cucurbita pepo (Zucchini)	cmacpeB508
CmaCh01G010800	Bottle gourd (USVL1VR-Ls)	cmalsiB409
CmaCh01G010800	Cucumber (Gy14) v2	cgybcmaB928