Carg22408 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCCGCTCTTCCAACCAACCAATCGACAAGAATTTCATATTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCACTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGAGGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAGAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGGGAATGACGACGCGTTGAGCGATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATTAA ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCCGCTCTTCCAACCAACCAATCGACAAGAATTTCATATTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCACTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGAGGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAGAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGGGAATGACGACGCGTTGAGCGATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATTAA ATGGCCGACCAAATCAACAACCAAACACTTCAAAAGGTAACAAAATTATTGTTTTCTATCTCTTTGTTGTCCTTCTTCTTTACCCTTCCATCTTGGCTCTTCCATTCCCCAATTCTCCGCTCTTCCAACCAACCAATCGACAAGAATTTCATATTCCTTCTCTGCAACGGTCTCCTCGTTTTCCTCGCAAAATATTCCGGTCTATTCAAATCTCTCTCCACTTCCCGACCAAATTACGACGCTTTCAGTGTCTACGAGCTCGACCCTTTGTCTCCTCCAACGATGTTAGAGGACGAAAAACAAACAACAGTGTTTACAACAACAACACGAGGAAAGAACGATGAGTCTGAAGAAAGAACCATTTCGATTCCAGAAATTGGCGACGATGATGTTGAAGAACACGACGATAGAACAACCGATGAAGAAGGGAATGACGACGCGTTGAGCGATGAAGAACTTAACCGAAAATTCGATGAATTTATCAAAAGAATGAAGGAAGAAATCATTGAGGATGCTCAAAAAAACTCTAGTGGTAGTTTAATTAGTAATTAA MADQINNQTLQKVTKLLFSISLLSFFFTLPSWLFHSPILRSSNQPIDKNFIFLLCNGLLVFLAKYSGLFKSLSTSRPNYDAFSVYELDPLSPPTMLEDEKQTTVFTTTTRGKNDESEERTISIPEIGDDDVEEHDDRTTDEEGNDDALSDEELNRKFDEFIKRMKEEIIEDAQKNSSGSLISN
BLAST of Carg22408 vs. NCBI nr
Match: XP_023525692.1 (uncharacterized protein LOC111789225 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218.4 bits (555), Expect = 2.0e-53 Identity = 152/185 (82.16%), Postives = 154/185 (83.24%), Query Frame = 0
BLAST of Carg22408 vs. NCBI nr
Match: XP_022981623.1 (uncharacterized protein LOC111480689 [Cucurbita maxima]) HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44 Identity = 156/177 (88.14%), Postives = 159/177 (89.83%), Query Frame = 0
BLAST of Carg22408 vs. NCBI nr
Match: XP_022936021.1 (uncharacterized protein LOC111442742 [Cucurbita moschata]) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 104/192 (54.17%), Postives = 115/192 (59.90%), Query Frame = 0
BLAST of Carg22408 vs. NCBI nr
Match: KGN44005.1 (hypothetical protein Csa_7G098730 [Cucumis sativus]) HSP 1 Score: 95.1 bits (235), Expect = 2.6e-16 Identity = 83/181 (45.86%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of Carg22408 vs. NCBI nr
Match: XP_022975721.1 (uncharacterized protein LOC111475827 [Cucurbita maxima]) HSP 1 Score: 95.1 bits (235), Expect = 2.6e-16 Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of Carg22408 vs. TAIR10
Match: AT3G13130.1 (unknown protein) HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05 Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of Carg22408 vs. TrEMBL
Match: tr|A0A0A0K300|A0A0A0K300_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G098730 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16 Identity = 83/181 (45.86%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of Carg22408 vs. TrEMBL
Match: tr|A0A1S3CI71|A0A1S3CI71_CUCME (uncharacterized protein LOC103501239 OS=Cucumis melo OX=3656 GN=LOC103501239 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14 Identity = 109/185 (58.92%), Postives = 119/185 (64.32%), Query Frame = 0
BLAST of Carg22408 vs. TrEMBL
Match: tr|A0A2N9FA96|A0A2N9FA96_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11995 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 7.0e-10 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Carg22408 vs. TrEMBL
Match: tr|A0A1U8KX99|A0A1U8KX99_GOSHI (uncharacterized protein LOC107921743 OS=Gossypium hirsutum OX=3635 GN=LOC107921743 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.9e-09 Identity = 51/172 (29.65%), Postives = 78/172 (45.35%), Query Frame = 0
BLAST of Carg22408 vs. TrEMBL
Match: tr|A0A0D2U4X6|A0A0D2U4X6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G449500 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.9e-09 Identity = 51/172 (29.65%), Postives = 78/172 (45.35%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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