CmaCh16G004580 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.NNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAACCATTCTTTCTCCTCACCCTCTTCCCATTTCTTGCCTCTCTCAAATGGGTTCTCTTCATTTCGTCTCTTAATCCCAAATTCCACCTTACCCGTCTGCTGGGATTTTCCAAATGGACTGAGAAACCTGTTCTTTCTCTTTAATTTTCATATTTTTCATATTTCCCATCTGGGTTTTCATTCTATGGCCGCGGTTGCTGAGAATTCCGGTGAGGCAGCGGCTGCCAAGAATTTTGATCCGCAGATGAAACCCAAATCACAATTTGATGCTAATAACCTCGCTGAAATGTTCAGTAATTTGAACCCTTTGGCTAAGGAGTTTTTCCCTTCCTCTTACTCTCATCATGATCGCCAAGATTTTCAATTCTATTATCAAAACAATACTCGATCGTCGGCCAAAGCCTTTCAGGTCGCCGATCAACTGTTGGACGGTGATATCAATCGCAGGGTATTCTCTTTTTTTCCCCCCTTGAATTCTTTAATCTGATCTGCTTTTCCTGTTCTTGTTTCGATTTGGGATTTTGGAATTCAACCCATAATTGAAATGCTGGAATTGGATTGAATTATGTTTATGTTCATGTTTAATCTGATGAATTTTATTCTGGGATGTGCTATTAGTATGATTTACTGTCGTTGACCCTGGAAATTCTTGATGATATCTACATTCAATCCATAATTTCATTGCTCGAATCGGTTCGGTCGAACTTTTTGTTTGATCTGGGACTGTTTGTTCTTACTGATTGTTTTTCAAGATAATGTGTATATGTTTAATGCTATGAAGTTTACTTGTGAATTGTTCATTGTTGTGGTTTGTTCAATTCTTCGCTACATTCCCATTTCTCATGCTATTTTGGAGAATCGTTTTCGATTGAAAAAGCTTTTGTGTTCGCCTTCCGATCATCGTTTAGATCGCCTCGGATCTGTTAGTACAACGATAGCTAGTCATTATCTGCCTGGAATGATGAAGCTAATTAAATTATTATCCGGCTCGATTCTAAAATATAATCAAAATTGATGCTTCATCATGTTGCCATAAGTTCTTATCTCTGTGTTAGGCTATTGAGACCGATAACGTTCACTTAAGGTTTGTGTTGGGCGCTTGAACTAGGATTAGTCTATCTTATGCTATTTAAGTTACTTGGATTCGTTTCGCAATTTAGTCTCTACGGTCCGCTCTATTACTATTACCAATATTTGAAGAATGCTTGTCTGAACTGTGGCTCGTCGATAAATAGAACGATAAGAACTAGGACCTTTCCTTTTTCGTAATTCTTGTAACTTATCGACCATGTTGAGATTATCGAGCTCCATTGGCATGCTTTCGTATTGGTAGACGCATGATAGCATGTAGGAATATGTTCCTTTCGTATCTCGTAACACTCTGTTTTGCTCCTATAGGAAAAGAGTTGTGATGCCTTTATAAAATCGTTTAATTTTTAGAATCATAAAAGGAATCAATCGCCGTGAATTCAATTGAATGATATCGAACTTTTTTCCATGCTACAAGTTAATACTCTCCTCTTTCTCGCTCTCTTTCAGAGACGAAGCGACTTTAATAACCAGGGGAGAAGAAGAATGAATAACAATAGATCTGTCAGGGCTCAGCAAGAGGAAAGTATAAGGAGGACTGTCTATGTATCTGATATCGATAAGGATGTGAGTATCGGTCATATCTTTACAAGCTTAGAGTCTTGTTATAATGCTCGAGATAATTTTAGAATGAGACGTTTGTTTCTAAAATCTAGGTCTCTGAAGAGGAGCTCGCCAAGGTATTCAGGGAGTTTTGTGGTTATGTAAGTATACTCCATTTCTAGAAAATTATTTCGCCTCATTTTGCAGAAAGAAAAAGTGTTTTCCGTGTACTTTGACGAGCATGAACTTCGGTCCACTGACTCGAATTAAGTATTCTCCTTCTTGAGTTCTTATGCTCGAACGAGGCGCTGATTTGGTTTATATTATTGAATATTCTCGAAACTTAATTGAAGACCTTGCTTACGTGGAAATTTTATATCGTTAAAGGTTAATGATTGCCGAATATGTGGCGATCCCCATTCAGTTCTTCGTTTTGCTTTTGTGGAGTTTGCTAATGAGCGTAAGTTCCTTCATGAATTTTTCTGAAAAAAGAAGTATATAAGTTGATCTTACATGCCACCCTGGAATGTTTTGGCAACAGATAGTGCTAGAACAGCCATAGGCCTTAGCGGGACGGTGGTCGGGTCTTATCCAGTTAAGGTATTGCCTTCAAAGACTGCCATTCTTCCTGTGAATCCTACCTTTCTCCCTAAGGTATGGCGTTTCCTGATCTCTTCCTATATGGATATATTCATATTCTCCGTACAAAAGTTCTCGTGTAAAACCTGATTCGATCTTTCGTTCTTATAATTTTATTACAGTCAAACGATGAATGGGATATGTGTACAAGAACTATCTACTGCACAAATATTGATAAGAAGGTAATTTCTTCACTTTTTCCCTAACTAAGAAGAAAATTAGTGCAATTCGTGAAAAAGAAAGGATCCATAACTTGTTCTTTAATCAATTCTTCCTGCTATGGTTTGTGGTAATCGGGGTCGGTTTTCTTAACTTCTTCGACGTGTACTAGCCTTGTGCATATAGAAAGATCAAGTCCATTACTTTTTCTTCGTATCTCTGCTCCGGTGCTGTTGATTTTCTTTTCTAGATCAAGTCTTAGATTATGCAATTACGTAAAATATTCCGACTTATTATCTGATGACACGATGGTGCTGGTGTTTCCAAATTCGATATCATTTTCTATGCTTCTTGTCCTTCCATACTCCTCGTTCGATCTCCTTCAATCTCAATCCGAGGTCGACAACTCCATGTTTTTTGTTTACAGGTATCTCAGGCTGAAGTTAAGAGTTTCTTTGAAACATCTTGTGGTGAGGTAAGATATATAGCTTATACAAAGAGGGCATATTCGTGTTGGCACGTTTTCGAAGATTTTAACCGATAAATCTTCCGTTTGAGTTTAGGTAACTCGCTTGAGGTTGTTGGGGGATCAGCTGCATTCGACCCGTATAGCGTTTGTCGAGTTTGCTATGGTAAACCTTTTCTTTGCTCTGCTTAGATATCTTGTTGGTTACTTTTTTTTTGTAAGAACAGCTTTGTTTGTTTGTGTGAACAGGCAGAGACGGCTCTTCAAGCACTGAATTGTAGTGGCATGATCTTGGGATCTCAGCCAATCAGGTCTGGTGAAGCTCTCACTGTTCTAAATATATTGGTTCATACATTTGTTCACTTACATTGTTTCATGAAAATTTGTAGGGTAAGTCCTTCTAAGACTCCGGTTCGGCCACGGGTTACTCGTCCGGGAAGCATGAAGCCATCTTGAACAGGCGAACTCTGAATGTCCCAAATGTTGGTGGTAAACTTTGATTACAGTAGTTATAAGTATAGGTTGGACAATGAAATTCAGACAAGTTGTGAATTGTTTGAAGTGTTGGTGAAACTTTTAGCTTCTGTGGCTGAACTTGTTCATAACTCTTCTTCAATTGAAGTTCTTCATATCACTGAGTTTCAATCTTAAAACTGCTATATGTTTTGGTTTCTTAAGTGTTTTTTGAGTTATTCTATGCCATTTTAGATTGATATTGTATGGCCTGATTTTTCTGCTGCTGATGCTGCTCTGCTTCCTCTATGTTCTTGAATGAAGAACCCGAACCCAACAAACACAAATTTGATTCCATTAGATCGGGAGAGTGGGTGTTGAAACTTTTCCCTAATCTACGTGTTTTAGAAAGCTCGAAAGAGAAAACCTAAAGAGAGAACAATAGTTACTAGCGGTGGACTTGAACTGTTTTAAATTCTCTCTTTCGTTTAACGGTATAAAATCGTTAGCCACATTGTACTAGCTTCAGAAAAAGATTGTTGAACTATGATGATCAGATTTTCATTCTCCGTCCAATCCTTGCAAAAAAAAAAAAAAAAATAGAAAGCAAGAACGAGAACAAAACAAGTTTCTCCATCTCTTCTACTAAAATACACTCGTTTTTCGACTTTTCAAATGTCATGATATCATGGGAATAACTGAGATTTATTAATGAAATGTATATAAACAAACGAGGAAAAGAAAAAGAGAGTAAAAACTAGAAAAGAATAAAAGAATTATATGTCAATAAGTACAAATGATACTAAGCAACAAAGATCATCCTAAGAAACATCTATCTCTATAATATGCATTCATTCACTCAGAATAAAGCTAATCAATTCTTGGCATCTCTCGCAGCACTCTTTGGAACTCCTTGAACGA NNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAACCATTCTTTCTCCTCACCCTCTTCCCATTTCTTGCCTCTCTCAAATGGGTTCTCTTCATTTCGTCTCTTAATCCCAAATTCCACCTTACCCGTCTGCTGGGATTTTCCAAATGGACTGAGAAACCTGTTCTTTCTCTTTAATTTTCATATTTTTCATATTTCCCATCTGGGTTTTCATTCTATGGCCGCGGTTGCTGAGAATTCCGGTGAGGCAGCGGCTGCCAAGAATTTTGATCCGCAGATGAAACCCAAATCACAATTTGATGCTAATAACCTCGCTGAAATGTTCAGTAATTTGAACCCTTTGGCTAAGGAGTTTTTCCCTTCCTCTTACTCTCATCATGATCGCCAAGATTTTCAATTCTATTATCAAAACAATACTCGATCGTCGGCCAAAGCCTTTCAGGTCGCCGATCAACTGTTGGACGGTGATATCAATCGCAGGAGACGAAGCGACTTTAATAACCAGGGGAGAAGAAGAATGAATAACAATAGATCTGTCAGGGCTCAGCAAGAGGAAAGTATAAGGAGGACTGTCTATGTATCTGATATCGATAAGGATGTCTCTGAAGAGGAGCTCGCCAAGGTATTCAGGGAGTTTTGTGGTTATGTTAATGATTGCCGAATATGTGGCGATCCCCATTCAGTTCTTCGTTTTGCTTTTGTGGAGTTTGCTAATGAGCATAGTGCTAGAACAGCCATAGGCCTTAGCGGGACGGTGGTCGGGTCTTATCCAGTTAAGGTATTGCCTTCAAAGACTGCCATTCTTCCTGTGAATCCTACCTTTCTCCCTAAGTCAAACGATGAATGGGATATGTGTACAAGAACTATCTACTGCACAAATATTGATAAGAAGGTATCTCAGGCTGAAGTTAAGAGTTTCTTTGAAACATCTTGTGGTGAGGTAACTCGCTTGAGGTTGTTGGGGGATCAGCTGCATTCGACCCGTATAGCGTTTGTCGAGTTTGCTATGGCAGAGACGGCTCTTCAAGCACTGAATTGTAGTGGCATGATCTTGGGATCTCAGCCAATCAGGGTAAGTCCTTCTAAGACTCCGGTTCGGCCACGGGTTACTCGTCCGGGAAGCATGAAGCCATCTTGAACAGGCGAACTCTGAATGTCCCAAATGTTGGTGGTAAACTTTGATTACAGTAGTTATAAGTATAGGTTGGACAATGAAATTCAGACAAGTTGTGAATTGTTTGAAGTGTTGGTGAAACTTTTAGCTTCTGTGGCTGAACTTGTTCATAACTCTTCTTCAATTGAAGTTCTTCATATCACTGAGTTTCAATCTTAAAACTGCTATATGTTTTGGTTTCTTAAGTGTTTTTTGAGTTATTCTATGCCATTTTAGATTGATATTGTATGGCCTGATTTTTCTGCTGCTGATGCTGCTCTGCTTCCTCTATGTTCTTGAATGAAGAACCCGAACCCAACAAACACAAATTTGATTCCATTAGATCGGGAGAGTGGGTGTTGAAACTTTTCCCTAATCTACGTGTTTTAGAAAGCTCGAAAGAGAAAACCTAAAGAGAGAACAATAGTTACTAGCGGTGGACTTGAACTGTTTTAAATTCTCTCTTTCGTTTAACGGTATAAAATCGTTAGCCACATTGTACTAGCTTCAGAAAAAGATTGTTGAACTATGATGATCAGATTTTCATTCTCCGTCCAATCCTTGCAAAAAAAAAAAAAAAAATAGAAAGCAAGAACGAGAACAAAACAAGTTTCTCCATCTCTTCTACTAAAATACACTCGTTTTTCGACTTTTCAAATGTCATGATATCATGGGAATAACTGAGATTTATTAATGAAATGTATATAAACAAACGAGGAAAAGAAAAAGAGAGTAAAAACTAGAAAAGAATAAAAGAATTATATGTCAATAAGTACAAATGATACTAAGCAACAAAGATCATCCTAAGAAACATCTATCTCTATAATATGCATTCATTCACTCAGAATAAAGCTAATCAATTCTTGGCATCTCTCGCAGCACTCTTTGGAACTCCTTGAACGA ATGGCCGCGGTTGCTGAGAATTCCGGTGAGGCAGCGGCTGCCAAGAATTTTGATCCGCAGATGAAACCCAAATCACAATTTGATGCTAATAACCTCGCTGAAATGTTCAGTAATTTGAACCCTTTGGCTAAGGAGTTTTTCCCTTCCTCTTACTCTCATCATGATCGCCAAGATTTTCAATTCTATTATCAAAACAATACTCGATCGTCGGCCAAAGCCTTTCAGGTCGCCGATCAACTGTTGGACGGTGATATCAATCGCAGGAGACGAAGCGACTTTAATAACCAGGGGAGAAGAAGAATGAATAACAATAGATCTGTCAGGGCTCAGCAAGAGGAAAGTATAAGGAGGACTGTCTATGTATCTGATATCGATAAGGATGTCTCTGAAGAGGAGCTCGCCAAGGTATTCAGGGAGTTTTGTGGTTATGTTAATGATTGCCGAATATGTGGCGATCCCCATTCAGTTCTTCGTTTTGCTTTTGTGGAGTTTGCTAATGAGCATAGTGCTAGAACAGCCATAGGCCTTAGCGGGACGGTGGTCGGGTCTTATCCAGTTAAGGTATTGCCTTCAAAGACTGCCATTCTTCCTGTGAATCCTACCTTTCTCCCTAAGTCAAACGATGAATGGGATATGTGTACAAGAACTATCTACTGCACAAATATTGATAAGAAGGTATCTCAGGCTGAAGTTAAGAGTTTCTTTGAAACATCTTGTGGTGAGGTAACTCGCTTGAGGTTGTTGGGGGATCAGCTGCATTCGACCCGTATAGCGTTTGTCGAGTTTGCTATGGCAGAGACGGCTCTTCAAGCACTGAATTGTAGTGGCATGATCTTGGGATCTCAGCCAATCAGGGTAAGTCCTTCTAAGACTCCGGTTCGGCCACGGGTTACTCGTCCGGGAAGCATGAAGCCATCTTGA MAAVAENSGEAAAAKNFDPQMKPKSQFDANNLAEMFSNLNPLAKEFFPSSYSHHDRQDFQFYYQNNTRSSAKAFQVADQLLDGDINRRRRSDFNNQGRRRMNNNRSVRAQQEESIRRTVYVSDIDKDVSEEELAKVFREFCGYVNDCRICGDPHSVLRFAFVEFANEHSARTAIGLSGTVVGSYPVKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGSQPIRVSPSKTPVRPRVTRPGSMKPS
BLAST of CmaCh16G004580 vs. Swiss-Prot
Match: CID9_ARATH (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana GN=CID9 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 4.2e-92 Identity = 187/299 (62.54%), Postives = 224/299 (74.92%), Query Frame = 1
BLAST of CmaCh16G004580 vs. Swiss-Prot
Match: CID8_ARATH (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana GN=CID8 PE=1 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 5.9e-86 Identity = 177/290 (61.03%), Postives = 219/290 (75.52%), Query Frame = 1
BLAST of CmaCh16G004580 vs. Swiss-Prot
Match: CID12_ARATH (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana GN=CID12 PE=1 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.7e-80 Identity = 167/271 (61.62%), Postives = 200/271 (73.80%), Query Frame = 1
BLAST of CmaCh16G004580 vs. Swiss-Prot
Match: CID11_ARATH (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana GN=CID11 PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.8e-79 Identity = 166/276 (60.14%), Postives = 200/276 (72.46%), Query Frame = 1
BLAST of CmaCh16G004580 vs. Swiss-Prot
Match: CID10_ARATH (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana GN=CID10 PE=2 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.7e-77 Identity = 161/296 (54.39%), Postives = 203/296 (68.58%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TrEMBL
Match: A0A0A0L0A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G076250 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 1.1e-147 Identity = 266/284 (93.66%), Postives = 273/284 (96.13%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TrEMBL
Match: M5WGQ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009298mg PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 5.7e-104 Identity = 210/307 (68.40%), Postives = 245/307 (79.80%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TrEMBL
Match: A0A059BUR6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03200 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.8e-100 Identity = 207/310 (66.77%), Postives = 241/310 (77.74%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TrEMBL
Match: A0A072V9E0_MEDTR (CTC-interacting domain protein OS=Medicago truncatula GN=MTR_2g070540 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.5e-99 Identity = 200/299 (66.89%), Postives = 234/299 (78.26%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TrEMBL
Match: A0A061F9L2_THECC (CTC-interacting domain 9 OS=Theobroma cacao GN=TCM_032334 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.5e-99 Identity = 204/311 (65.59%), Postives = 243/311 (78.14%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TAIR10
Match: AT3G14450.1 (AT3G14450.1 CTC-interacting domain 9) HSP 1 Score: 339.3 bits (869), Expect = 2.4e-93 Identity = 187/299 (62.54%), Postives = 224/299 (74.92%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TAIR10
Match: AT1G53650.1 (AT1G53650.1 CTC-interacting domain 8) HSP 1 Score: 318.9 bits (816), Expect = 3.3e-87 Identity = 177/290 (61.03%), Postives = 219/290 (75.52%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TAIR10
Match: AT4G10610.1 (AT4G10610.1 CTC-interacting domain 12) HSP 1 Score: 300.8 bits (769), Expect = 9.4e-82 Identity = 167/271 (61.62%), Postives = 200/271 (73.80%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TAIR10
Match: AT3G49390.1 (AT3G49390.1 CTC-interacting domain 10) HSP 1 Score: 290.8 bits (743), Expect = 9.7e-79 Identity = 161/296 (54.39%), Postives = 203/296 (68.58%), Query Frame = 1
BLAST of CmaCh16G004580 vs. TAIR10
Match: AT1G32790.2 (AT1G32790.2 CTC-interacting domain 11) HSP 1 Score: 276.9 bits (707), Expect = 1.5e-74 Identity = 155/264 (58.71%), Postives = 189/264 (71.59%), Query Frame = 1
BLAST of CmaCh16G004580 vs. NCBI nr
Match: gi|449438949|ref|XP_004137250.1| (PREDICTED: polyadenylate-binding protein-interacting protein 9 [Cucumis sativus]) HSP 1 Score: 558.1 bits (1437), Expect = 9.3e-156 Identity = 282/304 (92.76%), Postives = 290/304 (95.39%), Query Frame = 1
BLAST of CmaCh16G004580 vs. NCBI nr
Match: gi|659101793|ref|XP_008451796.1| (PREDICTED: polyadenylate-binding protein-interacting protein 9 isoform X1 [Cucumis melo]) HSP 1 Score: 557.8 bits (1436), Expect = 1.2e-155 Identity = 284/304 (93.42%), Postives = 289/304 (95.07%), Query Frame = 1
BLAST of CmaCh16G004580 vs. NCBI nr
Match: gi|700198388|gb|KGN53546.1| (hypothetical protein Csa_4G076250 [Cucumis sativus]) HSP 1 Score: 530.8 bits (1366), Expect = 1.6e-147 Identity = 266/284 (93.66%), Postives = 273/284 (96.13%), Query Frame = 1
BLAST of CmaCh16G004580 vs. NCBI nr
Match: gi|659101795|ref|XP_008451797.1| (PREDICTED: polyadenylate-binding protein-interacting protein 9 isoform X2 [Cucumis melo]) HSP 1 Score: 483.0 bits (1242), Expect = 3.8e-133 Identity = 245/264 (92.80%), Postives = 249/264 (94.32%), Query Frame = 1
BLAST of CmaCh16G004580 vs. NCBI nr
Match: gi|595864073|ref|XP_007211705.1| (hypothetical protein PRUPE_ppa009298mg [Prunus persica]) HSP 1 Score: 385.6 bits (989), Expect = 8.2e-104 Identity = 210/307 (68.40%), Postives = 245/307 (79.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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