CmaCh12G008810 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACACCTTCCACTCTCACACACAATCCCCCGCCGCCGCTGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCTCCGCTGCAGCAGCAGCAGCAGCAGATGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCTAAGGCCCTTAGAAGGATGTTCGTTGACGACGATGACGGCGGCTGCGGCAGCGGTGGCGGTGGCGAACCCTCCGGTGACCGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTCAATTGGAAGTCAGTACTCTCAATTTCTCTCGATTTATTTATTTATTTATTATTTAAGAAAAAATGGGATTTTTACAATTAAAATTTTATATAATACATTAACAAATTTTTATTTGTTCTTAATAATGGAATTTTATTTTAAAAAATTCTAAAATTTAACAAATTTGCTCTATTTATAGATGTGCTTTAAATTAGGGTAATCTAAGGAATTATTTGATAAAGGATTTAATTTTTATTTTTAAAAACTAGATGTTTGTTATAAAATTCCTTAATTCTATTATTGAAATTTAATTTATGATTTTAAAATATCTATAAAAACTAATAGAAACTCCTCCAAATTTGAATTTCCACCCATATTAATCAAAACCTCTAATAAAATAACAGGGTGGAAATCTTCCCATAGCAAACGTGATCGAAATAAAACAATATCTACTAGTTATGGGCAATATCTACTAGTTATGGGTCTAGGTCGTTACAAATGGTATCAAAAGTAGGGAGGAGACTATTCCCCACAAAGGTAGACAGAGAGGGTGTGCCAATAAAATAAGGACTAGCAAGGACGCTGGGCCCAAAATAGGTGGATTTGATGGGGTCTTACATTGATTGGAGAAAAGAAAGAGTGCTAGCCCCATTGATTGGAGAAAAGAACGAAGGTCAGCGAGCGTTCTGAGCTCTAAAGGGGTAGCGAGAGCCCTGAGCTCTAAAAGGGTGAATTGTGATATCCCACGTTTGTTGGGGACTCATTGAGCTCTGAAGGGGTGGATTGTGATGTCTCACGTTTGTTGGGGACTCATTGAGCTCTAAAGGGGGTGGATTGTGATGTCCCACGTTTGTTGGGGACTCGTTGAGCTCTGAAGGGGGTGGATTGTGATGTCCACATTAGTTGGGGACTCTCTAAGCTCTGAAGGGGGTGGATTGTGACCTCCCACATTGGTGGAGAGGAGAACAAAACACCTTTATAAGGAAGAAGACAATGTCTGCCCGCGTGGACCCGGACCGTTACAATATCAATCTTTTATCGACACATGGATAGCTAATTATCACGTAAATTGATTAATTTAAAAATGGGAAGTAATTATTATTATTATTATCATTATTTTTTGGTGAAAAAATAATGTAAATAAAGAGAATAATTAATAACATGAAATTCATGTGTATGTGTGGCAGTGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAATAAAAGCAAATTCAAGGAGGCGAAGAGGAAATAATTAAATTATATATTTTATGAGAAACCCATCT ATGAACACCTTCCACTCTCACACACAATCCCCCGCCGCCGCTGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCTCCGCTGCAGCAGCAGCAGCAGCAGATGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCTAAGGCCCTTAGAAGGATGTTCGTTGACGACGATGACGGCGGCTGCGGCAGCGGTGGCGGTGGCGAACCCTCCGGTGACCGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTCAATTGGAATGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAATAAAAGCAAATTCAAGGAGGCGAAGAGGAAATAATTAAATTATATATTTTATGAGAAACCCATCT ATGAACACCTTCCACTCTCACACACAATCCCCCGCCGCCGCTGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCTCCGCTGCAGCAGCAGCAGCAGCAGATGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCTAAGGCCCTTAGAAGGATGTTCGTTGACGACGATGACGGCGGCTGCGGCAGCGGTGGCGGTGGCGAACCCTCCGGTGACCGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTCAATTGGAATGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAATAAAAGCAAATTCAAGGAGGCGAAGAGGAAATAATTAA MNTFHSHTQSPAAAAAAEYFKMRRWPETQLGPPPPLQQQQQQMEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGNN
BLAST of CmaCh12G008810 vs. Swiss-Prot
Match: IAA33_ARATH (Auxin-responsive protein IAA33 OS=Arabidopsis thaliana GN=IAA33 PE=2 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-35 Identity = 76/119 (63.87%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of CmaCh12G008810 vs. Swiss-Prot
Match: IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica GN=IAA9 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 1
BLAST of CmaCh12G008810 vs. Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08 Identity = 38/112 (33.93%), Postives = 55/112 (49.11%), Query Frame = 1
BLAST of CmaCh12G008810 vs. Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08 Identity = 38/112 (33.93%), Postives = 55/112 (49.11%), Query Frame = 1
BLAST of CmaCh12G008810 vs. Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08 Identity = 50/162 (30.86%), Postives = 78/162 (48.15%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TrEMBL
Match: A0A0A0LH98_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G059200 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.1e-56 Identity = 119/156 (76.28%), Postives = 127/156 (81.41%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TrEMBL
Match: U5GBB1_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0006s18260g PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.7e-39 Identity = 86/121 (71.07%), Postives = 97/121 (80.17%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TrEMBL
Match: D7SQA8_VITVI (Auxin-responsive protein OS=Vitis vinifera GN=VIT_11s0052g00870 PE=3 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 5.9e-39 Identity = 96/177 (54.24%), Postives = 114/177 (64.41%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TrEMBL
Match: B9T1W9_RICCO (Auxin-responsive protein OS=Ricinus communis GN=RCOM_0306050 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38 Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TrEMBL
Match: A0A061GQU1_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_039219 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38 Identity = 82/120 (68.33%), Postives = 100/120 (83.33%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TAIR10
Match: AT5G57420.1 (AT5G57420.1 indole-3-acetic acid inducible 33) HSP 1 Score: 149.8 bits (377), Expect = 1.4e-36 Identity = 76/119 (63.87%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TAIR10
Match: AT2G33310.2 (AT2G33310.2 auxin-induced protein 13) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08 Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TAIR10
Match: AT5G65670.1 (AT5G65670.1 indole-3-acetic acid inducible 9) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08 Identity = 29/98 (29.59%), Postives = 52/98 (53.06%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TAIR10
Match: AT1G04550.2 (AT1G04550.2 AUX/IAA transcriptional regulator family protein) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 35/118 (29.66%), Postives = 56/118 (47.46%), Query Frame = 1
BLAST of CmaCh12G008810 vs. TAIR10
Match: AT3G04730.1 (AT3G04730.1 indoleacetic acid-induced protein 16) HSP 1 Score: 52.4 bits (124), Expect = 3.1e-07 Identity = 34/102 (33.33%), Postives = 53/102 (51.96%), Query Frame = 1
BLAST of CmaCh12G008810 vs. NCBI nr
Match: gi|659069771|ref|XP_008451708.1| (PREDICTED: auxin-responsive protein IAA33 [Cucumis melo]) HSP 1 Score: 229.6 bits (584), Expect = 4.0e-57 Identity = 120/156 (76.92%), Postives = 129/156 (82.69%), Query Frame = 1
BLAST of CmaCh12G008810 vs. NCBI nr
Match: gi|449466673|ref|XP_004151050.1| (PREDICTED: auxin-responsive protein IAA33 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 4.5e-56 Identity = 119/156 (76.28%), Postives = 127/156 (81.41%), Query Frame = 1
BLAST of CmaCh12G008810 vs. NCBI nr
Match: gi|566176869|ref|XP_006381794.1| (hypothetical protein POPTR_0006s18260g [Populus trichocarpa]) HSP 1 Score: 169.9 bits (429), Expect = 3.8e-39 Identity = 86/121 (71.07%), Postives = 97/121 (80.17%), Query Frame = 1
BLAST of CmaCh12G008810 vs. NCBI nr
Match: gi|225446042|ref|XP_002268816.1| (PREDICTED: auxin-responsive protein IAA33 [Vitis vinifera]) HSP 1 Score: 168.7 bits (426), Expect = 8.5e-39 Identity = 96/177 (54.24%), Postives = 114/177 (64.41%), Query Frame = 1
BLAST of CmaCh12G008810 vs. NCBI nr
Match: gi|255582934|ref|XP_002532238.1| (PREDICTED: auxin-responsive protein IAA33 [Ricinus communis]) HSP 1 Score: 167.9 bits (424), Expect = 1.4e-38 Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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