Cp4.1LG07g07370 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g07370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAuxin-responsive protein
LocationCp4.1LG07 : 6283519 .. 6285548 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAACCCATTTCTTCATTTTCTCTCACAAACTAAACCCATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCTGCAGCAGCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCTCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCGGTGGCGAACCCTCCGGTGAACGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTGAATTGGAAGTCAGTACTCTCAATTTCTCTGAATTTATTTATTTATTTATTATTTAAGAAAAAAAAATGGGATTTTTAGAATTAAAAATTTTATATAATACATTAACAAATTTTTATTTTAAAAAATTCTTAATTTTAACAAATTTGCTCTATTTATAGATGTGCTTTAAATTAGGGTAATCTAAGGAATTATTTGATAAAGGATTTAATTTTTTATTTTTAAAAACTCAGATGTTTGTTATAAAATTTCTTAATTCTTTTAGATTATTATTGAAATTTAATTTAAAATTTTAAAATACCTATAAAAACTAATAGAAACTACTCCAAATTCTAATTTTCACCTATATTATTCATAAAATAGTCTTATGGTTAGAAATTAGTAAGAGATTGAGGCCGTGAAACAAAGTCCAAAAAAGACCATATCTCCCCGTGGAGGGTCTTGTTACAAATGGTATCAGAGCATTGAGGAGGCTGTTTTCCAAAGGGTAGACACGAGGCAGTGTGCTAGGAAGGACACTGTCTCCAAAAGGGTGGATTTAGTACACGAGACAGTGTGCCAATAAGGACACTGTACCCTCGATTTAGTACACGAGGCAGTGTGCCAGTAAGGACACTGTCCCCCAAGGGGGTGGATTTAGTACACGAGGCAGCGTGCCATGTCCCGTGCCAGTAAGGACACTGGCCCCAAAGGGGATGGATTTAATGGGGTCTCACATCGATTGGAGAAAGAAACGAGTGCTAGCGAGGGGTGAGCTCTGAAGAGGGTGGATTGTAATGTCGCACATTGGTTGGGGAGGAGAATAAAACATCCTCTATAGGGGTGTGAAAATCTTTCCTAGCAAATCCAAAGACAACAATATCTGCGAGTACCTTTCCTAGCCAATCCAAAGACAACAATATCTGCGAGTGGTGGGCCTGGGTCGTTATTAGAGCATCGAGTAGGCTGTTCCCCAAAGAGGGTAGACACGAGGCAGTGTACAAGTAAAGACGCTGGTCCCAAAAGGGGTGAAATTTGGTGGGAGTCCCACATCGATTGGAGAAAAGAGTGCGAGCGAGGACGCTGAGCCCCGAAAGGGTGGATTGTGATGTCTCACATTTATAAGAGTGTGAAAACCTTCCCCTACCCAACCGTTTTAAAGCGTTCTCGAAAGGGAAAGCCAAAAAGTACAATATCTCCTAGCAGTGGACCTAAGCCGTTACAATATCAATAATGTCGTTTTTTTGTGTTTAAACGACTATGTGAATGAAGTACGGGTTGAAAATTGGCTAATTAATGCAACTTCTTCGTCTTAATCTACAAAATCTCGACCCTTTTATCGACACATGGATAGCTAATTATCACATAAATTGATTAATTTAAAAATAATGTAAATAAAGAGAATAATTAATAACATGAAATTTATGTGTGTGTGTGACAGTGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTTCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAAATTATATATTTTATGACAAACCCATCTCTATTATTTAAATATTATCTTATATAATTATCATTTCTTTCATAAAATATGAAAGAAAATAATAATATCT

mRNA sequence

CGAACCCATTTCTTCATTTTCTCTCACAAACTAAACCCATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCTGCAGCAGCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCTCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCGGTGGCGAACCCTCCGGTGAACGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTGAATTGGAATGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTTCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAAATTATATATTTTATGACAAACCCATCTCTATTATTTAAATATTATCTTATATAATTATCATTTCTTTCATAAAATATGAAAGAAAATAATAATATCT

Coding sequence (CDS)

ATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCTGCAGCAGCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCTCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCGGTGGCGAACCCTCCGGTGAACGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTGAATTGGAATGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTTCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAA

Protein sequence

MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Homology
[Close]
BLAST of Cp4.1LG07g07370 vs. Swiss-Prot
Match: IAA33_ARATH (Auxin-responsive protein IAA33 OS=Arabidopsis thaliana GN=IAA33 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-35
Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 1 

Query: 47  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQ 106
           E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D           
Sbjct: 64  EDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTD-------D 123

Query: 107 LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 161
           LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILP+K N+R+ + N
Sbjct: 124 LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]
BLAST of Cp4.1LG07g07370 vs. Swiss-Prot
Match: IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica GN=IAA9 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 1 

Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHL 117
           V V  EG AI +++ L  H+SY+ LA  L RMF  +D  G  + + +   D A    G +
Sbjct: 95  VKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAA----GPV 154

Query: 118 VAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           V YED + D +L GD+ W+DF R  KR++IL
Sbjct: 155 VTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181

[Close]
BLAST of Cp4.1LG07g07370 vs. Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 32/92 (34.78%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSG-ERQLDLANAVPGH 117
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 118 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]
BLAST of Cp4.1LG07g07370 vs. Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-08
Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 1 

Query: 31  LGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMF 90
           +G PP++  +     E+    +A    V V ++G    +++ L  HA Y  L +AL  MF
Sbjct: 63  VGWPPVRAYRRNALRED----SARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMF 122

Query: 91  VDD---DDGGGGEPSGERQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRI 149
                   GGGG+  G + +DL      ++  YED + D +L GD+ W  FV   KRIR+
Sbjct: 123 ASCLAVRGGGGGDGEGTKLVDLVTGAE-YVPTYEDKDGDWMLVGDVPWKMFVESCKRIRL 178

[Close]
BLAST of Cp4.1LG07g07370 vs. Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 1 

Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHL 117
           V V LEG A+ ++I L  H SY+SL++AL+ MF      G      E Q     +   ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205

Query: 118 VAYEDIENDLLLAGDLNWNDFVRVAKRIRI 148
           + YED E D +L GD+ W  F+   KR+ I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235

[Close]
BLAST of Cp4.1LG07g07370 vs. TrEMBL
Match: A0A0A0LH98_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G059200 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.2e-57
Identity = 121/153 (79.08%), Postives = 129/153 (84.31%), Query Frame = 1 

Query: 8   TQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAI 67
           TQSPA AAAAAEYFKM RW + ++ PP          ++ EEDFAAVIPPVTVVLEGRAI
Sbjct: 4   TQSPA-AAAAAEYFKMTRWADRRVSPP----------QQAEEDFAAVIPPVTVVLEGRAI 63

Query: 68  CQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDL 127
           CQRISLHKH SYESLAKALRRMFVDDDD   GE SGER LDL NAVPG++VAYEDIENDL
Sbjct: 64  CQRISLHKHGSYESLAKALRRMFVDDDD-NDGEDSGERGLDLTNAVPGYIVAYEDIENDL 123

Query: 128 LLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 161
           LLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Sbjct: 124 LLAGDLNWNDFVRVAKRIRILPVKANSRRGRAN 144

[Close]
BLAST of Cp4.1LG07g07370 vs. TrEMBL
Match: B9T1W9_RICCO (Auxin-responsive protein OS=Ricinus communis GN=RCOM_0306050 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.1e-40
Identity = 84/115 (73.04%), Postives = 99/115 (86.09%), Query Frame = 1 

Query: 45  EEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGE 104
           +++++  + V+PPVTVVLEGR+ICQRISLHKHASY+SLA ALR+MFVD  D GG   S +
Sbjct: 58  DDDDDLVSTVVPPVTVVLEGRSICQRISLHKHASYQSLAMALRQMFVDGGDAGGVTDS-D 117

Query: 105 RQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG 160
             LDL NAVPGHL+AYED+ENDLLLAGDLNW DFVRVAKRIRILP+K NSR+GRG
Sbjct: 118 TDLDLTNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPVKGNSRKGRG 171

[Close]
BLAST of Cp4.1LG07g07370 vs. TrEMBL
Match: A0A061GQU1_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_039219 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.4e-39
Identity = 83/114 (72.81%), Postives = 99/114 (86.84%), Query Frame = 1 

Query: 46  EEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGER 105
           ++++  ++V+PPVTVVLEGR+ICQRISLH HASY SLAKALR+MFV+ +D G   P+ E 
Sbjct: 64  DDDDLVSSVVPPVTVVLEGRSICQRISLHNHASYHSLAKALRQMFVEGNDDG---PTSEN 123

Query: 106 QLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG 160
           +LDL+NAVPGHLVAYED+ENDLLLAGDLNW DFVRVAKRIRILP K NSR+ RG
Sbjct: 124 ELDLSNAVPGHLVAYEDMENDLLLAGDLNWKDFVRVAKRIRILPAKGNSRKIRG 174

[Close]
BLAST of Cp4.1LG07g07370 vs. TrEMBL
Match: D7SQA8_VITVI (Auxin-responsive protein OS=Vitis vinifera GN=VIT_11s0052g00870 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.6e-39
Identity = 94/173 (54.34%), Postives = 111/173 (64.16%), Query Frame = 1 

Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQ------------LGPPPLQQQQMEEEEEEE 60
           MNTF    Q+        + F  RRW +                PP      ++      
Sbjct: 1   MNTFRFQHQTQ-------DSFDSRRWSQNHRPSSAGFYARRAAAPPQPSSSSIQTFPGLA 60

Query: 61  ED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQ 120
           +D   AAV+PPVTVVLEGR+IC RISLH HASY+SLA+ALR+MFVD      G   G+ +
Sbjct: 61  DDDLVAAVVPPVTVVLEGRSICHRISLHSHASYQSLARALRQMFVDGSSADVGAAGGDHE 120

Query: 121 LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG 160
           LDL+NAVPGHL+AYED+ENDLLLAGDLNW DFVRVAKRIRILP K NSR+GRG
Sbjct: 121 LDLSNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPAKRNSRKGRG 166

[Close]
BLAST of Cp4.1LG07g07370 vs. TrEMBL
Match: A0A059CS32_EUCGR (Auxin-responsive protein OS=Eucalyptus grandis GN=EUGRSUZ_C02329 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-38
Identity = 81/113 (71.68%), Postives = 96/113 (84.96%), Query Frame = 1 

Query: 47  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQ 106
           +++  AAV+PPVTV +EGR+IC RISLHKH SY+SLAKALR+MFVDD D        ++ 
Sbjct: 68  DDDLVAAVVPPVTVAIEGRSICHRISLHKHESYQSLAKALRQMFVDDAD------VPDKD 127

Query: 107 LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG 160
           L+L+NAVPGHL+AYEDIENDLLLAGDLNW DFVRVAKRIRILP+K NSR+GRG
Sbjct: 128 LNLSNAVPGHLIAYEDIENDLLLAGDLNWKDFVRVAKRIRILPVKTNSRKGRG 174

[Close]
BLAST of Cp4.1LG07g07370 vs. TAIR10
Match: AT5G57420.1 (AT5G57420.1 indole-3-acetic acid inducible 33)

HSP 1 Score: 151.0 bits (380), Expect = 6.3e-37
Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 1 

Query: 47  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQ 106
           E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D           
Sbjct: 64  EDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTD-------D 123

Query: 107 LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 161
           LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILP+K N+R+ + N
Sbjct: 124 LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]
BLAST of Cp4.1LG07g07370 vs. TAIR10
Match: AT2G33310.2 (AT2G33310.2 auxin-induced protein 13)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 32/92 (34.78%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSG-ERQLDLANAVPGH 117
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 118 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]
BLAST of Cp4.1LG07g07370 vs. TAIR10
Match: AT1G04550.2 (AT1G04550.2 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 32/93 (34.41%), Postives = 50/93 (53.76%), Query Frame = 1 

Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGER--QLDLANAVPG 117
           V V ++G  I +++ +  H+SYE+LA+ L  MF     G  G    E+   L L +    
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFF----GMTGTTCREKVKPLRLLDGSSD 186

Query: 118 HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
            ++ YED E D +L GD+ W  F+   KR+RI+
Sbjct: 187 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIM 215

[Close]
BLAST of Cp4.1LG07g07370 vs. TAIR10
Match: AT4G28640.2 (AT4G28640.2 indole-3-acetic acid inducible 11)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 32/95 (33.68%), Postives = 49/95 (51.58%), Query Frame = 1 

Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGG-EPSGERQLD---LANAV 117
           V V ++G  I ++I L+ H  YESL+  L  MF+    G    E  G  +     L +  
Sbjct: 139 VKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGS 198

Query: 118 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
            G ++ YED E D +L GD+ W  F+   +R+RI+
Sbjct: 199 SGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIM 233

[Close]
BLAST of Cp4.1LG07g07370 vs. TAIR10
Match: AT1G04250.1 (AT1G04250.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.3e-07
Identity = 34/98 (34.69%), Postives = 52/98 (53.06%), Query Frame = 1 

Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSG------ERQL-DLA 117
           V V ++G    ++I L  + SY+ L+ AL  MF     G  G   G      ER+L DL 
Sbjct: 113 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLV 172

Query: 118 NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           N+   ++ +YED + D +L GD+ W  FV   KR+R++
Sbjct: 173 NSWD-YVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLM 209

[Close]
BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: gi|659069771|ref|XP_008451708.1| (PREDICTED: auxin-responsive protein IAA33 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57
Identity = 122/153 (79.74%), Postives = 131/153 (85.62%), Query Frame = 1 

Query: 8   TQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAI 67
           TQSPAAAAAA EYFKM RW E ++GPP          ++ EEDF+AVIPPVTVVLEGRAI
Sbjct: 4   TQSPAAAAAA-EYFKMARWAERRVGPP----------QQAEEDFSAVIPPVTVVLEGRAI 63

Query: 68  CQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDL 127
           CQRISLHKH SYESLAKALRRMFVDDDD G  E SGER+LDL NAVPG++VAYEDIENDL
Sbjct: 64  CQRISLHKHGSYESLAKALRRMFVDDDDEG--EESGERRLDLTNAVPGYIVAYEDIENDL 123

Query: 128 LLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 161
           LLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Sbjct: 124 LLAGDLNWNDFVRVAKRIRILPVKANSRRGRAN 143

[Close]
BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: gi|449466673|ref|XP_004151050.1| (PREDICTED: auxin-responsive protein IAA33 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 8.9e-57
Identity = 121/153 (79.08%), Postives = 129/153 (84.31%), Query Frame = 1 

Query: 8   TQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAI 67
           TQSPA AAAAAEYFKM RW + ++ PP          ++ EEDFAAVIPPVTVVLEGRAI
Sbjct: 4   TQSPA-AAAAAEYFKMTRWADRRVSPP----------QQAEEDFAAVIPPVTVVLEGRAI 63

Query: 68  CQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDL 127
           CQRISLHKH SYESLAKALRRMFVDDDD   GE SGER LDL NAVPG++VAYEDIENDL
Sbjct: 64  CQRISLHKHGSYESLAKALRRMFVDDDD-NDGEDSGERGLDLTNAVPGYIVAYEDIENDL 123

Query: 128 LLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 161
           LLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Sbjct: 124 LLAGDLNWNDFVRVAKRIRILPVKANSRRGRAN 144

[Close]
BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: gi|255582934|ref|XP_002532238.1| (PREDICTED: auxin-responsive protein IAA33 [Ricinus communis])

HSP 1 Score: 172.9 bits (437), Expect = 4.4e-40
Identity = 84/115 (73.04%), Postives = 99/115 (86.09%), Query Frame = 1 

Query: 45  EEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGE 104
           +++++  + V+PPVTVVLEGR+ICQRISLHKHASY+SLA ALR+MFVD  D GG   S +
Sbjct: 58  DDDDDLVSTVVPPVTVVLEGRSICQRISLHKHASYQSLAMALRQMFVDGGDAGGVTDS-D 117

Query: 105 RQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG 160
             LDL NAVPGHL+AYED+ENDLLLAGDLNW DFVRVAKRIRILP+K NSR+GRG
Sbjct: 118 TDLDLTNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPVKGNSRKGRG 171

[Close]
BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: gi|590581165|ref|XP_007014272.1| (Indole-3-acetic acid inducible 33 [Theobroma cacao])

HSP 1 Score: 169.5 bits (428), Expect = 4.9e-39
Identity = 83/114 (72.81%), Postives = 99/114 (86.84%), Query Frame = 1 

Query: 46  EEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGER 105
           ++++  ++V+PPVTVVLEGR+ICQRISLH HASY SLAKALR+MFV+ +D G   P+ E 
Sbjct: 64  DDDDLVSSVVPPVTVVLEGRSICQRISLHNHASYHSLAKALRQMFVEGNDDG---PTSEN 123

Query: 106 QLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG 160
           +LDL+NAVPGHLVAYED+ENDLLLAGDLNW DFVRVAKRIRILP K NSR+ RG
Sbjct: 124 ELDLSNAVPGHLVAYEDMENDLLLAGDLNWKDFVRVAKRIRILPAKGNSRKIRG 174

[Close]
BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: gi|225446042|ref|XP_002268816.1| (PREDICTED: auxin-responsive protein IAA33 [Vitis vinifera])

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38
Identity = 94/173 (54.34%), Postives = 111/173 (64.16%), Query Frame = 1 

Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQ------------LGPPPLQQQQMEEEEEEE 60
           MNTF    Q+        + F  RRW +                PP      ++      
Sbjct: 1   MNTFRFQHQTQ-------DSFDSRRWSQNHRPSSAGFYARRAAAPPQPSSSSIQTFPGLA 60

Query: 61  ED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQ 120
           +D   AAV+PPVTVVLEGR+IC RISLH HASY+SLA+ALR+MFVD      G   G+ +
Sbjct: 61  DDDLVAAVVPPVTVVLEGRSICHRISLHSHASYQSLARALRQMFVDGSSADVGAAGGDHE 120

Query: 121 LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG 160
           LDL+NAVPGHL+AYED+ENDLLLAGDLNW DFVRVAKRIRILP K NSR+GRG
Sbjct: 121 LDLSNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPAKRNSRKGRG 166

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g07370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA33_ARATH1.1e-3565.79Auxin-responsive protein IAA33 OS=Arabidopsis thaliana GN=IAA33 PE=2 SV=1[more]
IAA9_ORYSJ3.6e-1040.66Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica GN=IAA9 PE=2 SV=1[more]
IAA13_ARATH2.6e-0834.78Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=1 SV=2[more]
IAA23_ORYSJ7.6e-0831.40Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=... [more]
IAA25_ORYSJ2.9e-0736.67Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=... [more]
BLAST of Cp4.1LG07g07370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH98_CUCSA6.2e-5779.08Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G059200 PE=3 SV=1[more]
B9T1W9_RICCO3.1e-4073.04Auxin-responsive protein OS=Ricinus communis GN=RCOM_0306050 PE=3 SV=1[more]
A0A061GQU1_THECC3.4e-3972.81Auxin-responsive protein OS=Theobroma cacao GN=TCM_039219 PE=3 SV=1[more]
D7SQA8_VITVI7.6e-3954.34Auxin-responsive protein OS=Vitis vinifera GN=VIT_11s0052g00870 PE=3 SV=1[more]
A0A059CS32_EUCGR2.2e-3871.68Auxin-responsive protein OS=Eucalyptus grandis GN=EUGRSUZ_C02329 PE=3 SV=1[more]
BLAST of Cp4.1LG07g07370 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57420.16.3e-3765.79 indole-3-acetic acid inducible 33[more]
AT2G33310.21.5e-0934.78 auxin-induced protein 13[more]
AT1G04550.22.1e-0834.41 AUX/IAA transcriptional regulator family protein[more]
AT4G28640.21.1e-0733.68 indole-3-acetic acid inducible 11[more]
AT1G04250.12.3e-0734.69 AUX/IAA transcriptional regulator family protein[more]
BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069771|ref|XP_008451708.1|1.4e-5779.74PREDICTED: auxin-responsive protein IAA33 [Cucumis melo][more]
gi|449466673|ref|XP_004151050.1|8.9e-5779.08PREDICTED: auxin-responsive protein IAA33 [Cucumis sativus][more]
gi|255582934|ref|XP_002532238.1|4.4e-4073.04PREDICTED: auxin-responsive protein IAA33 [Ricinus communis][more]
gi|590581165|ref|XP_007014272.1|4.9e-3972.81Indole-3-acetic acid inducible 33 [Theobroma cacao][more]
gi|225446042|ref|XP_002268816.1|1.1e-3854.34PREDICTED: auxin-responsive protein IAA33 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR003311AUX_IAA
IPR000270PB1_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g07370.1Cp4.1LG07g07370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 55..152
score: 15
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 34..156
score: 9.0
NoneNo IPR availablePANTHERPTHR31734:SF7AUXIN-RESPONSIVE PROTEIN IAA33coord: 34..156
score: 9.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g07370Cucsa.089360Cucumber (Gy14) v1cgycpeB0179
Cp4.1LG07g07370CmaCh12G008810Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g07370CmoCh12G008890Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g07370Cla022821Watermelon (97103) v1cpewmB814
Cp4.1LG07g07370Csa2G059200Cucumber (Chinese Long) v2cpecuB811
Cp4.1LG07g07370MELO3C004026Melon (DHL92) v3.5.1cpemeB777
Cp4.1LG07g07370ClCG11G012160Watermelon (Charleston Gray)cpewcgB723
Cp4.1LG07g07370CSPI02G06010Wild cucumber (PI 183967)cpecpiB812
Cp4.1LG07g07370Lsi11G007570Bottle gourd (USVL1VR-Ls)cpelsiB654
Cp4.1LG07g07370MELO3C004026.2Melon (DHL92) v3.6.1cpemedB913
Cp4.1LG07g07370CsaV3_2G008380Cucumber (Chinese Long) v3cpecucB1005
Cp4.1LG07g07370Bhi06G001123Wax gourdcpewgoB1018
Cp4.1LG07g07370CsGy2G006130Cucumber (Gy14) v2cgybcpeB261
Cp4.1LG07g07370Carg27566Silver-seed gourdcarcpeB0321
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g07370Cucurbita pepo (Zucchini)cpecpeB142
Cp4.1LG07g07370Cucurbita pepo (Zucchini)cpecpeB150
Cp4.1LG07g07370Cucurbita pepo (Zucchini)cpecpeB499
Cp4.1LG07g07370Cucurbita maxima (Rimu)cmacpeB163
Cp4.1LG07g07370Cucurbita maxima (Rimu)cmacpeB790
Cp4.1LG07g07370Cucurbita moschata (Rifu)cmocpeB140
Cp4.1LG07g07370Cucurbita moschata (Rifu)cmocpeB743
Cp4.1LG07g07370Wild cucumber (PI 183967)cpecpiB807
Cp4.1LG07g07370Cucumber (Chinese Long) v2cpecuB807
Cp4.1LG07g07370Bottle gourd (USVL1VR-Ls)cpelsiB681
Cp4.1LG07g07370Watermelon (Charleston Gray)cpewcgB745
Cp4.1LG07g07370Watermelon (97103) v1cpewmB820
Cp4.1LG07g07370Melon (DHL92) v3.5.1cpemeB749
Cp4.1LG07g07370Cucumber (Gy14) v2cgybcpeB145
Cp4.1LG07g07370Melon (DHL92) v3.6.1cpemedB888
Cp4.1LG07g07370Silver-seed gourdcarcpeB0089
Cp4.1LG07g07370Silver-seed gourdcarcpeB0848
Cp4.1LG07g07370Cucumber (Chinese Long) v3cpecucB0999
Cp4.1LG07g07370Wax gourdcpewgoB1071