CmaCh08G001780 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAACCGATACTACAAGAGCGCGGTAGAAAATCCCTCACCTCTTCCATAGAAGTTTCAAGTGAAACTGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATACACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGGTACGCAAGATTTACGGTTTTGATTTCCGAAACACAAACTTAGAAATTCTTATCGCTACGCCTTTTGTAATTTATTTTTCGAAATCGTCGTTTGATTGAGGTTTTTGAGTTGTTGCTTCGTATTTCTTTGATTTCTTCTTCGTATGTTTCGATTGTGAGTTTCTGGAATTTCTTTCATTACGCACTGTTAGGAAATCTCAATTTATGGAGGAAAATTGAATTCGAATCTGGATTGTTGTTGTTAAATCATTTGAAATCCACCTAGATTTGGCCTTCTGAACTTGCTCATGATCATATCACGCTTCCAAATCCTGTCTCTGCTTCTTTGGATAGTAAATTTGAAAACCAAATTCATTTTCCTCAACACCGACAGATAGAATCGCTGAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAAGCGAAATCTAAGAACTCCGTTAAGGAGGAGATCGATGATGATGATGATGATGAGGAGGAGTTTAGTAAAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCTTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTATTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCCCTCTCCAAATCCCAGAACTTCCTCATGTGGGTTTGCGATAATTTTGGATTTGATGATGGAAAACATTGGTTCTTGACCTACAAAGGAAGATGGGGGTTAGACAACAATTTTTCAAACGGTGCTGATGAAGAAACATGGAGAGATTTGCTTGGAGGAATCCCCAGATTATGTAATTATTATATTTGTTTGGTTTTATGGAAAATTTGCTTTGTAATTTAGGGGTCAGAGATTATCTTTTGAGGGAAAAAACAATCAAAATTAAAGTGAAAGAACCATTTTTTCTCCTTTTGAGAAAATGATTGCTTATAGTTTTGAGGTCTTTTCCCTTTTATCTGAAAAAAAATAAATAAATAAAAAT ATGGCGGAACCGATACTACAAGAGCGCGGTAGAAAATCCCTCACCTCTTCCATAGAAGTTTCAAGTGAAACTGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATACACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAAGCGAAATCTAAGAACTCCGTTAAGGAGGAGATCGATGATGATGATGATGATGAGGAGGAGTTTAGTAAAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCTTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTATTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCCCTCTCCAAATCCCAGAACTTCCTCATGTGGGTTTGCGATAATTTTGGATTTGATGATGGAAAACATTGGTTCTTGACCTACAAAGGAAGATGGGGGTTAGACAACAATTTTTCAAACGGTGCTGATGAAGAAACATGGAGAGATTTGCTTGGAGGAATCCCCAGATTATGTAATTATTATATTTGTTTGGTTTTATGGAAAATTTGCTTTGTAATTTAGGGGTCAGAGATTATCTTTTGAGGGAAAAAACAATCAAAATTAAAGTGAAAGAACCATTTTTTCTCCTTTTGAGAAAATGATTGCTTATAGTTTTGAGGTCTTTTCCCTTTTATCTGAAAAAAAATAAATAAATAAAAAT ATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATACACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACAAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAAGCGAAATCTAAGAACTCCGTTAAGGAGGAGATCGATGATGATGATGATGATGAGGAGGAGTTTAGTAAAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCTTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTATTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCCCTCTCCAAATCCCAGAACTTCCTCATGTGGGTTTGCGATAA MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTKEGTKEGTKEGTESEELASALDNLKAKSKNSVKEEIDDDDDDEEEFSKEDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIIENSPKQEHDEASMLPPLQIPELPHVGLR
BLAST of CmaCh08G001780 vs. TrEMBL
Match: A0A0A0K9P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.9e-56 Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 1
BLAST of CmaCh08G001780 vs. TrEMBL
Match: B9GZP0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16920g PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 8.3e-27 Identity = 86/205 (41.95%), Postives = 130/205 (63.41%), Query Frame = 1
BLAST of CmaCh08G001780 vs. TrEMBL
Match: B9RMD0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079710 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.3e-23 Identity = 81/200 (40.50%), Postives = 122/200 (61.00%), Query Frame = 1
BLAST of CmaCh08G001780 vs. TrEMBL
Match: A0A151U8P7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019860 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.8e-22 Identity = 83/207 (40.10%), Postives = 123/207 (59.42%), Query Frame = 1
BLAST of CmaCh08G001780 vs. TrEMBL
Match: V4VFJ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032798mg PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.1e-22 Identity = 76/201 (37.81%), Postives = 122/201 (60.70%), Query Frame = 1
BLAST of CmaCh08G001780 vs. TAIR10
Match: AT1G27300.1 (AT1G27300.1 unknown protein) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20 Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 1
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|659119785|ref|XP_008459843.1| (PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo]) HSP 1 Score: 229.6 bits (584), Expect = 5.0e-57 Identity = 133/206 (64.56%), Postives = 163/206 (79.13%), Query Frame = 1
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|449445758|ref|XP_004140639.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 4.2e-56 Identity = 134/205 (65.37%), Postives = 160/205 (78.05%), Query Frame = 1
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|778711893|ref|XP_011656811.1| (PREDICTED: uncharacterized protein LOC101222559 isoform X1 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55 Identity = 134/207 (64.73%), Postives = 162/207 (78.26%), Query Frame = 1
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|743818967|ref|XP_011020766.1| (PREDICTED: uncharacterized protein LOC105123023 [Populus euphratica]) HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27 Identity = 86/205 (41.95%), Postives = 130/205 (63.41%), Query Frame = 1
BLAST of CmaCh08G001780 vs. NCBI nr
Match: gi|224072572|ref|XP_002303788.1| (hypothetical protein POPTR_0003s16920g [Populus trichocarpa]) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 86/205 (41.95%), Postives = 130/205 (63.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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