CmaCh06G001600 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGAATGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAATGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCCACCAACTCACAACCGCGATAATAACCCTAACCCCACCACCGGACACTCATCCTACTCCGACACGCTACTGGTACCTCCCGCCGCCGACACTAGCCGGCGGGATGCCCTTCTCGACATCGGAACGTCGTACGAGAACGTCGTAGGAAGTTCCGATGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGACGGAGAAGAGGAGGAGGAGGAGCAGCAGCCGCAGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAGCCCTCCACTGCTGACGACGGTGACTGGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA ATGGAGAAGAATGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAATGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCCACCAACTCACAACCGCGATAATAACCCTAACCCCACCACCGGACACTCATCCTACTCCGACACGCTACTGGTACCTCCCGCCGCCGACACTAGCCGGCGGGATGCCCTTCTCGACATCGGAACGTCGTACGAGAACGTCGTAGGAAGTTCCGATGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGACGGAGAAGAGGAGGAGGAGGAGCAGCAGCCGCAGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAGCCCTCCACTGCTGACGACGGTGACTGGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA ATGGAGAAGAATGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAATGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCCACCAACTCACAACCGCGATAATAACCCTAACCCCACCACCGGACACTCATCCTACTCCGACACGCTACTGGTACCTCCCGCCGCCGACACTAGCCGGCGGGATGCCCTTCTCGACATCGGAACGTCGTACGAGAACGTCGTAGGAAGTTCCGATGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGACGGAGAAGAGGAGGAGGAGGAGCAGCAGCCGCAGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAGCCCTCCACTGCTGACGACGGTGACTGGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAADTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED
BLAST of CmaCh06G001600 vs. TrEMBL
Match: A0A0A0L0X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G001720 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.8e-71 Identity = 164/247 (66.40%), Postives = 179/247 (72.47%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TrEMBL
Match: A0A0A0KGW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509590 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14 Identity = 65/153 (42.48%), Postives = 83/153 (54.25%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TrEMBL
Match: A0A067LGT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22382 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14 Identity = 80/210 (38.10%), Postives = 102/210 (48.57%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TrEMBL
Match: B9S6T8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0873820 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12 Identity = 74/223 (33.18%), Postives = 105/223 (47.09%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TrEMBL
Match: A0A0D2QT35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G198600 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.6e-12 Identity = 60/162 (37.04%), Postives = 77/162 (47.53%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TAIR10
Match: AT4G35700.1 (AT4G35700.1 zinc finger (C2H2 type) family protein) HSP 1 Score: 75.9 bits (185), Expect = 3.7e-14 Identity = 59/152 (38.82%), Postives = 73/152 (48.03%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TAIR10
Match: AT4G35610.1 (AT4G35610.1 zinc finger (C2H2 type) family protein) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 57/158 (36.08%), Postives = 76/158 (48.10%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TAIR10
Match: AT2G26940.1 (AT2G26940.1 C2H2-type zinc finger family protein) HSP 1 Score: 53.5 bits (127), Expect = 2.0e-07 Identity = 19/45 (42.22%), Postives = 32/45 (71.11%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TAIR10
Match: AT5G56200.1 (AT5G56200.1 C2H2 type zinc finger transcription factor family) HSP 1 Score: 51.2 bits (121), Expect = 9.7e-07 Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 1
BLAST of CmaCh06G001600 vs. TAIR10
Match: AT4G35280.1 (AT4G35280.1 C2H2-like zinc finger protein) HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06 Identity = 32/79 (40.51%), Postives = 38/79 (48.10%), Query Frame = 1
BLAST of CmaCh06G001600 vs. NCBI nr
Match: gi|659096552|ref|XP_008449156.1| (PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74 Identity = 171/248 (68.95%), Postives = 183/248 (73.79%), Query Frame = 1
BLAST of CmaCh06G001600 vs. NCBI nr
Match: gi|778688264|ref|XP_011652703.1| (PREDICTED: uncharacterized protein LOC105435052 [Cucumis sativus]) HSP 1 Score: 276.6 bits (706), Expect = 4.0e-71 Identity = 164/247 (66.40%), Postives = 179/247 (72.47%), Query Frame = 1
BLAST of CmaCh06G001600 vs. NCBI nr
Match: gi|778722509|ref|XP_011658503.1| (PREDICTED: zinc finger protein ZAT4-like [Cucumis sativus]) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 65/153 (42.48%), Postives = 83/153 (54.25%), Query Frame = 1
BLAST of CmaCh06G001600 vs. NCBI nr
Match: gi|643737706|gb|KDP43755.1| (hypothetical protein JCGZ_22382 [Jatropha curcas]) HSP 1 Score: 86.3 bits (212), Expect = 7.7e-14 Identity = 80/210 (38.10%), Postives = 102/210 (48.57%), Query Frame = 1
BLAST of CmaCh06G001600 vs. NCBI nr
Match: gi|659081072|ref|XP_008441135.1| (PREDICTED: zinc finger protein ZAT4 [Cucumis melo]) HSP 1 Score: 83.2 bits (204), Expect = 6.5e-13 Identity = 63/155 (40.65%), Postives = 81/155 (52.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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