CmaCh04G013970 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G013970
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRNA-binding protein Nova-1
LocationCma_Chr04 : 7133207 .. 7141262 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTAAACCACTTTTCGAGGTGAATTTGTAAGTTACCTTATCAACTGCAGCAAACCCGATACTAGACTAAGCTCCACTCAATCTAAAAGGATCGAAGTCTGAGTAAGACCAACGCTATTGAAGCTTGACCGAAAGACTATATAGCTATTAAATAGGCGACACTCAATCACACGAGCAATTAAGAAATTAGTGCGAATAATCGAATCGAGTTATAAATTTTGGACAATAATTTTACTTTATAAGCTTTAAAAATTTGGGATATTAAATAAATACTTTGGAACAAAGAAAAAAAGAAGAAGAATATATTACTCTAATTTGGAAAGGTGGATCTTCTACTTAACCCTAATAATTACGTAAAGGCTTACGTTCTCGCAGATAAGGGTTTTCGCGCCCCCAAAATATCCTTATTATTAAAAAAGAAAAAGAAGAAAAAGAAAAAAATTGCATTTTTTTAGACAAATCCAATAAAATAATTAAATAGACAAAAATAAAAAGGAAAAATATAACTGCATATTCAACCTGAGCTTCCATTTTGGCTTTGGTGTTGAACGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCTTCTTCCCCATTTATCAACTACTCTGCAACTCTATCTCTCTTTCTATCTAGCCGCCGCCGCCGCCGCCGCCGTGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCCTCATACGTCTCGTCTCCGGAGGCACCTACGAAACGATCTCCACCGCCGCCAAAATCTCCGAACTCAGGTATCTGATCTGATTTTAATCGCTCTTTTACTGTCATTTTCAACATTTTGATTCCTACTCTCACTGTTTTGTAAGAATTGTGTATGCTTGGAGCTGTTCTTGTATGCGAGTGTTTTTGTTTCAGATCGGTTTGTTTGACGAATGTTGCAATTGCGTCTCTCTCTCTCTCTTTGTTCAACCTTCTTGTTTTTCTCATTATTTTTTGAATTTAAACCCTTGCCTTAAGTGTTTTGTTTGATTTATTTGTGCGGTCGGAGGGAATGAGAAATCGTGCAATTTCGACCTCCAATGGCCTGGACACTCCTGCTTCTTTGCCTGGAAAGCTTAGAAGAAGAGAGTCTGACTTCTGGTAGGGCTTTTTTGTTTTTGGTGTGGGGGAAGGATTAGTCTATTGAGATTTATCACAGTTGACCGAATGAATTGGGGAGCAGTTGTCATTTTCTTGAAGTGCCATTGCCACCGGTTCATCCGTCGATTGACAACAAGCGCACTGCGTCTCCTGGTGTATGTCATAATAGTCGAAAGTTCGCTATCTTTGGTGATTGGACAGCAAGTTGAAAAAGGATAAGTTTCATTTGTTCAAGCAGAGTATTTAAACTGTCTTTTAACCATTTGTTCTTCTATAATTTCATGAAGGCAGCTGAACGTTGAATGCTCTTTGGACATGACGAACTTGTTTTTCCCGTGTATTTCCATTTTAATTCCTGAAATTGCCTCAATGAGAATCTGTATGACGATTTCTTCTAATAATAGGGATAGGATGTAGATAAAACCTTTCCTCAATTCTTCTTTATCATTGATGTTTATCATTTTTTCTTTTGTGAAAACGCAGTAAATAGTCTTATGTAAAATTTGATGTGAAAGCAAGGATTCATAAGACGTTCTATATTTACCACCTACACAGGAATATGCACGATTCTTTACAATGTATAATTATGATTTATATCAAAGGCTTTAGCTCTGTCACATTCTCAACATTGTAGATTAATTTATTAATAGGATCTACATACATTTCTAATTGTTGGTGCATATATGCCGTACATTTTGCGGATATCAAGATTACTTCCTTTTCTGCTTATGAATGTTGTCTCAGTCATCCTAATTGTTATTGTCAGATAATATGGAAAAGGCTACATATATTAGGTTTCTGGTATCAAACGCTGCAGCTGGTTCTGTAATTGGGAAAGGTGGTTCAACAATTAATGATTTCCAGTCACAATCTGGTGCACGAATCCAGTTGTCACGAAATCATGAATTTTTCCCTGGAACCACTGATAGGATCATTATGGTATCTGGAACAATAAATGAAATACTGAAGGCCATGGAACTCGTTCTTGCCAAGTTGTTGAGTGAGGTAACCACTATGTAGTACAAGTTCACTCTAGAATTTAAATGTTCACTGTTTATGATTGATTAAAATTGTGTTTTCTTGTAGCTTCACGCTGAAGAAGTAGATGATGCTGAACCGAGAACAAAAGTGAGATTAATCGTTCCCCATAGTTCATGTGGTGCTATAATTGGCAAAGGAGGATCCACTATAAAGTACGATGATTATTCCTTATTTTTCTAACCCATGGTTACTAATTGCTTTATAATTTACTAGCTTAAACGGTTTATTATTAATTATAATTCGGTTAAATTATTAGTTTAGCCCAAATTGTAAAAGTGCCTAATTGATACTTGATCTTTTAATTATGTGTTTAATTATGTGTCTAATAGGTCCATACATTTTCAACTTTGTGTCTATTAGGTTTGTGAATTTTAACAAAATATTAAAATAGGTCCAGGACCTATTAGACACAAAAAGAAAAGTTTATGGATCTATTAAACGCAAAATTGAAGTTTAGACTTTTTAAAATTTAGGGATCTATTAGACACAATCTATGATTTTAAGGTTTTAAGTATATTTATTTATTCAACTTACAGATCAGAAAAATAGTTGCTAAGTGAACATTTTTTTTATAGTTCCTTGAAGGTATTTTCTATTCAAATTTGCATGAGGGTTCACTTTCCTTGCACAGATTGTTAAACAACTGCTGGCTTGTTTATCTAGGAACTTTTCCCTTCAACTCTATGTCTATATAGGTAATTGTGTAGAATGCAGATTTAGATCCTATTATGCTAGTTCTTGTTTATGCTTTTATTGAAGGAGGTACACATTCTCGTCATAATCCGTTACTTTCAAGTTTCTCAGTCATGTCCAGGAAGAAAGTACCAATTGATAGCGCTGTTTTCTATTTGAACTCCACTTAATTACTGTTAAACATGGTTCAATCTAATACAGAACAGATTCTATGCTAGTAAGGTCACTCCTTTTTTTTTTCTTCTTTTCTTTTTTAAGAAACAAAATTGTATTAAGAGAAAAAGAAAGGAAAATACATCCTAGGGGCAGGGGGTTGAGTGAAATTCCTCCCACAAAAAAGCTAAAAGAAAGAGCTTTCCAACAGTTAAAAGTTGTAGAAGGATTGTAATTTCAAAAATAATTCTTGTGACTAAAACAAAAACTCTACCAAGAAATAGTAAGCTATATACTTCAACAAGAAAGTCTCAAAGAGGATGACGTATCTTCAAAGATCGTCTGATTTCTCTCCAGCCAATATTTGCCTTTTTGGACGCTTCCACCTCAAGAAACTTCAAGGAGCCAACCATCAATAGTCTTTGACAAGTAGCCACACACACACCAAATATGTTCGCTAGGGAATTCCACCCATTGACAGCAAAGGAGTGGAGAAACCAATGGTCTAAGTTCTCTCTTCATTCCTAAGACAGAGGCAACGAATTGAGGAAAACTGAGCCCAACTTTGACTGTTTCTTTAAAGCCAATCTTGAGTATTCTAACCTCTATGGGCTAAAGACCACATATTGAATTTGTTGTTGTGACAGAGCTCTAATGTGTTAAGTTTTATCAACCCATAAATGGTGTATGTTAGATGATAATTCCTCACAGGAAGCAAGTAATGGTATTGTAACAGTGTTGTTTAAGGATTTCAATCTTGCACGTGACTTTTGATTTGGACGACAAAATGGATTGCCTTAGGTTTTCATATCATGGTTAAGGAGTAAATGTTTGAGTATCAGACTCATTGTTGTGTTCGTGAGGTTAAAAAAAAAACAAAAAAATAGGAGAGAGAGTCTGCCCATAGATAGATGATCTCAACTTGTTGAGATTTAAGTATGGAATAGAAGGTTAAAGGATGGAAATAATTGTTGCCTCTAAGATGGTTATGCTGTCTTGTCTAAGCATATTGAGTGGCATTCCTTTCGTTTCATACACACATTGATTTAATGAGTGTACCTTTCCTACACCTACAGGATATGCATAAAACAGTTGTAGTTTATCTCAGTCAGGTAATTGAAGATTCCAGAACTATATGAAGAAAATTTGTTGCGTTGGATAAATGACTCGTAAATGAATAGGAAAAAGAAAAGGGAAAAGAAGAAACATAAGGGACAGAGTTTCCATAATCAGAGGAATTTGAAATTTACATAAATCATGCTTTATTACTCTGCTTCTTTTCTTGGCTAGAAGATGACCTAATCCTTGACTTTTTAAGAGCATCAAATAATCGTTCCATTGGCTTCTGATTCAGTTTAAAATTGTTGCCAAAGATTTGGTAATTTCTCAATAATTTTTTTCATCTTAACCATCCAAGTGTTAAAATAGCCATCTTAATAATAAAAGACTCAAAGGGAATGAGTTCAATTTATGGTGGCCACATTCTTACGAATTTATTATTTTAATATCCTACTATTATCTTTCCAACCAAATGTTATAGGATCAAATCGTTATCATGTGAGAATGTATGTTCTTGCCAAACCAAACACCCATGGATATAATTTATTTTTGTTTGCATCTTTGACTTCTTCTCTATCATTTTTCATTTGTGCACAATCATTTATTTGAATTCCAACTTTATCATTTGATTTTTATGTGAACATAGTATCATTTGATCTTTGGAGTGACAGGCCAACTTTATCAGCTGCTTAAGTTTTGAGATCTTTAAAATGTCTGATCATCAGAATTTCCAGAAGAAAAACTTCTGCTTATTTCGTGTGCACTACATCAGAAAATAAGACTGACAGTGACAGTTCCGATTATGATTCAACTTATCATTCCAAAGATTTTTTTCTCAACTTGATTTGCATTAATGATTTCTAGTGGTTAGTAGTATTTGGTTTTAAAACTTGTCAGCTGGTATTATTATTATTTCTTTTTTACATGAAACAGAACTTGTCGGCTGTTACTGCTTTGGCCAAATTCCAATTATCTTTTTGGTGTTTCTTGATTTGTCTTGTAACTATACCTCCTTTGTAATTAACGCAAGTTTGGTTAGTTCCTTGGAAACTCCCAATGGAGGTTAATAGTTAGGTTATGTCTTTAGGTAACTTTCCATCTAATCGACAAAAAATCAGTCTGATTGAAAACTTGTATTCTGTCACTTATGGTTGCCTACCTTAAAAACACCCATAAAAGTGTGTTTTTGGGCACTAACGCACCAGTACCATTATGCAGGACATTTATTGAGGACTCTCAAGCTGGCATTAAGATATCACCACAAGATAATAACTATATGGGATCCACTGATAGGCTGGTGACGCTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCAAAGCTATCTGAGGATCCACATTACACCCAGTCAATGAATTATCCATTTTCATACCCGAGTATGTCTTTATTTAGCTTTTCTATTTCATTGTGGTATTATATTTTTCCGAACAAAAACTATTAAATGCTCACTTGCATTTTGTGGTTCACAAAATGTCCATCTTTTTTGGGGCACTTTCTTTCATCTGCTATATGTGATGCTGTTGTCTTATCTTTGTTATGACACGAGTAATTTATGTTTTTATGCAAATCAAACAGGTAGTGTAGTTGAAGGTTTAAATCACAACTGAAGAAAAATATTTATACTTAAGAAAAAGAAGGACAAGATGAATAACTAGTTTTCCCGCATGTAAATTCTTGCTGTTTTCGTTATTTTCCTTAGCCATTTAATCTTTTACTTGCTTTTGCTACAGCATCATACAATGCTATGAACAATGCTATGAACTCCGGATCCAACGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGTTTGTGATACCATGGCAATTTATATCGTTATTATGAGATTTTCCAGAAAGTAATTGAGAAATAATTAACGATGGTTTTATGTGGATGATAGATTATATTGTCTGAACAACATTCCCATGCCATGCGTAGTATTAACTAATATAGTTGATGTTGACGATAAAATGACTTAAATCTCATCAATGTGAGGCTTCTGTTATTTTATGACTTTCTTACATTCAAGAATTTCCTGATGCCAAAATTAGGCAGTAAATATGTTCCTTTGATACTGGATTTCTTTATCAATGAGCAAACATTCACTGCGACAAAAGGCTAAATTGCAGAACAATGTGGATTAGCTGTTCAACTTTCAGTAGGGTAAACAGAAGCGAAGTAATGAAGAAAAAGAAAAGAGTGAAAACAGGATAGCAAGTAAATGAAACCATTTATCATGGTGCAGAACTCAATTGAGCTTCATGAAAAAACCGTAGATAGCCTTCCTGTATTATGCTCTGAAAGAGAAATTTTATGCATTTTCTGTTTTTTGTTGCTGTTTAATCCATCTGTTTGTTGCTGTTTAATCCGTCCTTTCGTTGCTGTTTAATCTGTCTTTTTGTTGCTGTTTAATCTGTCTTTTTGTTGCTGTTAATCCGTCCCTGTAGATAAGTGGAATCTAGATACTGGTTTTCTCTTTTTAACAACTATGTTTCTCTCTATCCCCCCAACTAACTGCTGAAAAAGTGTTTACAATGCATGCAACTGCATGAAATGAGGACTTTATGCAATTGCACATATATATTTCTTATACTTCTCTGTGACTTTATGATATTGCTGACAGAAGATCTTTTGAAATTGTCTAGGAGGAACGGAATAACTCCTTGACTATTGGTGTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGTTTGTGTAAACCCCTCCACCTCCAACGCGTCCTATTTCCTTTCCGTGCAAGGTTGATAGTATTCAAGTCACAAATGTTACTCCATGTATTACTTTTTTACATTCAAAAGCGTTTCTTATTACAGGCTAGTGGTGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGTACAGAGGTTCTTTTGATATATTTACTCCCTTTATACTGTTGGTCTGTAAGTTCTTCATGGTAACAGTTGTATACTTGATCTGGAAAAGAAATGGGAAAATTTTAGGGAAATATGCAACTGTTACCATGAAGTCAAAGGACTCCAGTGAAGCAAAATAAAACGTAATGGATAATTATAAAAGTCTTTACATGCAGAGAACCAAAGAGAGGCATGATATGTAAAGATTCTTGTAATTATCCATTAGGTTTTATCTTGTTTGATTGGAGCCTTTCTTAGACCAGCCGACTCTTTTAGGATGTTTCTTTTTATTAAATTACAAGTTTAGTTCGTGCAATTTGAGGTCTTTTGTCTGTTCGAAACAAATACAAGTCAAAACTTAATTTCATTTTATGTCTAATAGAACCCTTTTCAATTATATGTCTAGTACATATGTGAATTTTAAATAGTTTGTAAATTTGGAATATTAGAGACTAAATTGGTACAAATCTCAAAGTTCAAGAACTAAAATTTTAATCGAACACATGCATACTTGATTGGTCCACAATTTGCAGGAAAGTAACGATTACTGGGTCACAAAGAGCAATCCGCGCTGCTGAATCGATGATTCTGCAGAAAGTAGCATATGCTTCTGAGAGGGTAATGCCTTTCAAATCCATTAACGATGCTTTGTACAGTTCTCTTACGATCTATAGCATTTTTTTCGTTATCGAATCGATGCAGGTTCTAGCACAGTGATAGAGTGGCGAAAGCTCTGAATGTTTGTAGAAGCAAGGCCGGGAGGTTTTCAGTTTTACCATTGAGGGAGAGCATGGCAATGGCAATGGAAATGAGAGGAAAAATAGAGTTAAGATTTCCTGGTACGTTGAGAGAGATACGCCATAATTTGATTGATGAGCCAAATAGAAAGATTAGCAGTGTCAAAGTTGTTTATACAATTGTAGCTTTGAATTTATTTTATATTTATGTTTTGAGCTTTATCTCTATTATATTGTTTGAACCTGCCTTCTCTTCACAACAGATTGTAGCTTCTTAG

mRNA sequence

ATGGATCTTAAACCACTTTTCGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCTTCTTCCCCATTTATCAACTACTCTGCAACTCTATCTCTCTTTCTATCTAGCCGCCGCCGCCGCCGCCGCCGTGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCCTCATACGTCTCGTCTCCGGAGGCACCTACGAAACGATCTCCACCGCCGCCAAAATCTCCGAACTCAGATAATATGGAAAAGGCTACATATATTAGGTTTCTGGTATCAAACGCTGCAGCTGGTTCTGTAATTGGGAAAGGTGGTTCAACAATTAATGATTTCCAGTCACAATCTGGTGCACGAATCCAGTTGTCACGAAATCATGAATTTTTCCCTGGAACCACTGATAGGATCATTATGGTATCTGGAACAATAAATGAAATACTGAAGGCCATGGAACTCGTTCTTGCCAAGTTGTTGAGTGAGCTTCACGCTGAAGAAGTAGATGATGCTGAACCGAGAACAAAAGTGAGATTAATCGTTCCCCATAGTTCATGTGGTGCTATAATTGGCAAAGGAGGATCCACTATAAAGACATTTATTGAGGACTCTCAAGCTGGCATTAAGATATCACCACAAGATAATAACTATATGGGATCCACTGATAGGCTGGTGACGCTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCAAAGCTATCTGAGGATCCACATTACACCCAGTCAATGAATTATCCATTTTCATACCCGACATCATACAATGCTATGAACAATGCTATGAACTCCGGATCCAACGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGGAATAACTCCTTGACTATTGGTGTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGTGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGAAAGTAACGATTACTGGGTCACAAAGAGCAATCCGCGCTGCTGAATCGATGATTCTGCAGAAAGTAGCATATGCTTCTGAGAGGCACAGTGATAGAGTGGCGAAAGCTCTGAATGTTTGTAGAAGCAAGGCCGGGAGGTTTTCAGTTTTACCATTGAGGGAGAGCATGGCAATGGCAATGGAAATGAGAGGAAAAATAGAGTTAAGATTTCCTGGTACGTTGAGAGAGATACGCCATAATTTGATTGATGAGCCAAATAGAAAGATTAGCAGTGTCAAAGTTGTTTATACAATTGTAGCTTTGAATTTATTTTATATTTATGTTTTGAGCTTTATCTCTATTATATTGTTTGAACCTGCCTTCTCTTCACAACAGATTGTAGCTTCTTAG

Coding sequence (CDS)

ATGGATCTTAAACCACTTTTCGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCTTCTTCCCCATTTATCAACTACTCTGCAACTCTATCTCTCTTTCTATCTAGCCGCCGCCGCCGCCGCCGCCGTGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCCTCATACGTCTCGTCTCCGGAGGCACCTACGAAACGATCTCCACCGCCGCCAAAATCTCCGAACTCAGATAATATGGAAAAGGCTACATATATTAGGTTTCTGGTATCAAACGCTGCAGCTGGTTCTGTAATTGGGAAAGGTGGTTCAACAATTAATGATTTCCAGTCACAATCTGGTGCACGAATCCAGTTGTCACGAAATCATGAATTTTTCCCTGGAACCACTGATAGGATCATTATGGTATCTGGAACAATAAATGAAATACTGAAGGCCATGGAACTCGTTCTTGCCAAGTTGTTGAGTGAGCTTCACGCTGAAGAAGTAGATGATGCTGAACCGAGAACAAAAGTGAGATTAATCGTTCCCCATAGTTCATGTGGTGCTATAATTGGCAAAGGAGGATCCACTATAAAGACATTTATTGAGGACTCTCAAGCTGGCATTAAGATATCACCACAAGATAATAACTATATGGGATCCACTGATAGGCTGGTGACGCTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCAAAGCTATCTGAGGATCCACATTACACCCAGTCAATGAATTATCCATTTTCATACCCGACATCATACAATGCTATGAACAATGCTATGAACTCCGGATCCAACGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGGAATAACTCCTTGACTATTGGTGTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGTGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGAAAGTAACGATTACTGGGTCACAAAGAGCAATCCGCGCTGCTGAATCGATGATTCTGCAGAAAGTAGCATATGCTTCTGAGAGGCACAGTGATAGAGTGGCGAAAGCTCTGAATGTTTGTAGAAGCAAGGCCGGGAGGTTTTCAGTTTTACCATTGAGGGAGAGCATGGCAATGGCAATGGAAATGAGAGGAAAAATAGAGTTAAGATTTCCTGGTACGTTGAGAGAGATACGCCATAATTTGATTGATGAGCCAAATAGAAAGATTAGCAGTGTCAAAGTTGTTTATACAATTGTAGCTTTGAATTTATTTTATATTTATGTTTTGAGCTTTATCTCTATTATATTGTTTGAACCTGCCTTCTCTTCACAACAGATTGTAGCTTCTTAG

Protein sequence

MDLKPLFESSFCERSATPSSPFINYSATLSLFLSSRRRRRRREGGGRRMESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPRTKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERHSDRVAKALNVCRSKAGRFSVLPLRESMAMAMEMRGKIELRFPGTLREIRHNLIDEPNRKISSVKVVYTIVALNLFYIYVLSFISIILFEPAFSSQQIVAS
BLAST of CmaCh04G013970 vs. Swiss-Prot
Match: BTR1_ARATH (Protein BTR1 OS=Arabidopsis thaliana GN=BTR1 PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.9e-112
Identity = 213/318 (66.98%), Postives = 265/318 (83.33%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTES    SPE   KRSP P  S  +D+ EK T+IRFLVSNAAAGSVIGKGGSTI +F
Sbjct: 1   MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           Q++SGARIQLSRN EFFPGTTDRIIM+SG+I E++  +EL+L KL SELHAE+ ++ EPR
Sbjct: 61  QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
            ++RL+VP+SSCG IIGKGG+TIK+FIE+S+AGIKISP DN + G +DRLVTLSGT EEQ
Sbjct: 121 RRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNS 288
           MRA DLI++KL+ED HY+Q+++ P+SY   YN++N A N     G+GG++QN+KEE + +
Sbjct: 181 MRAIDLILAKLTEDDHYSQNVHSPYSYAAGYNSVNYAPN-----GSGGKYQNHKEEASTT 240

Query: 289 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348
           +TIGV+D HIGLV+GRGGRNI+EI+Q +GARIKISDRGDFMSGTTDRKV+ITG QRAI+ 
Sbjct: 241 VTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQ 300

Query: 349 AESMILQKVAYASERHSD 367
           AE+MI QKV  A+ER +D
Sbjct: 301 AETMIKQKVDSATERTTD 313

BLAST of CmaCh04G013970 vs. Swiss-Prot
Match: NOVA1_MACFA (RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.7e-26
Identity = 77/224 (34.38%), Postives = 131/224 (58.48%), Query Frame = 1

Query: 59  SPEAPTKRSPPPPKSPNSDNMEKATY-IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQ 118
           S + P +  P    +  ++  E   Y ++ L+ + AAGS+IGKGG TI   Q ++GA I+
Sbjct: 25  SRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 84

Query: 119 LSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSEL-----HAEEVDDAEPRT--- 178
           LS++ +F+PGTT+R+ ++ GT+ E L A+   +A+ + E+       E V   +P+T   
Sbjct: 85  LSKSKDFYPGTTERVCLIQGTV-EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVN 144

Query: 179 -----KVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGT 238
                +V++IVP+S+ G IIGKGG+T+K  +E S A +++S Q  + +   +R+VT+SG 
Sbjct: 145 PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS-QKPDGINLQERVVTVSGE 204

Query: 239 IEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNS 269
            E+  +A +LI+ K+ EDP     +N  ++  T   A +N   S
Sbjct: 205 PEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGS 246

BLAST of CmaCh04G013970 vs. Swiss-Prot
Match: NOVA1_RAT (RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.7e-26
Identity = 77/220 (35.00%), Postives = 130/220 (59.09%), Query Frame = 1

Query: 59  SPEAPTKRSPPPPKSPNSDNMEKATY-IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQ 118
           S + P +  P    +  ++  E   Y ++ L+ + AAGS+IGKGG TI   Q ++GA I+
Sbjct: 24  SRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 83

Query: 119 LSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSEL-----HAEEVDDAEPRT--- 178
           LS++ +F+PGTT+R+ ++ GTI E L A+   +A+ + E+       E V   +P+T   
Sbjct: 84  LSKSKDFYPGTTERVCLIQGTI-EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVN 143

Query: 179 -----KVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGT 238
                +V++IVP+S+ G IIGKGG+T+K  +E S A +++S Q  + +   +R+VT+SG 
Sbjct: 144 PDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS-QKPDGINLQERVVTVSGE 203

Query: 239 IEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNN 265
            E+  +A +LI+ K+ EDP     +N  ++  T   A +N
Sbjct: 204 PEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSN 241

BLAST of CmaCh04G013970 vs. Swiss-Prot
Match: NOVA2_HUMAN (RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-25
Identity = 85/231 (36.80%), Postives = 134/231 (58.01%), Query Frame = 1

Query: 60  PEAPTKRSPP---PPK---SPNSDNMEKATY-IRFLVSNAAAGSVIGKGGSTINDFQSQS 119
           PEAP  R  P   PP+   +  S+  E+  Y ++ L+ + AAGS+IGKGG TI   Q ++
Sbjct: 3   PEAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKET 62

Query: 120 GARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSEL-----HAEEVDDAEP 179
           GA I+LS++ +F+PGTT+R+ +V GT  E L A+   +A+ + E+       E V+  +P
Sbjct: 63  GATIKLSKSKDFYPGTTERVCLVQGTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQP 122

Query: 180 RT--------KVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLV 239
           +T        + +LIVP+S+ G IIGKGG+T+K  +E S A +++S Q    +   +R+V
Sbjct: 123 QTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS-QKPEGINLQERVV 182

Query: 240 TLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGS 271
           T+SG  E+  +A   IV K+ EDP  +  +N   SY      + N+  +GS
Sbjct: 183 TVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN--ISYANVAGPVANSNPTGS 229

BLAST of CmaCh04G013970 vs. Swiss-Prot
Match: NOVA1_MOUSE (RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 5.4e-22
Identity = 77/247 (31.17%), Postives = 129/247 (52.23%), Query Frame = 1

Query: 59  SPEAPTKRSPPPPKSPNSDNMEKATY-IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQ 118
           S + P +  P    +  ++  E   Y ++ L+ + AAGS+IGKGG TI   Q ++GA I+
Sbjct: 25  SRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 84

Query: 119 LSRNHEFFPGTTDRIIMVSGTIN----------EILKAMELVLAK--------------- 178
           LS++ +F+PGTT+R+ ++ GTI           E ++ M   +AK               
Sbjct: 85  LSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNP 144

Query: 179 ------LLSELHAEEVDDAEPRT-----KVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAG 238
                 L S     +   ++P T     +V++IVP+S+ G IIGKGG+T+K  +E S A 
Sbjct: 145 DRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAW 204

Query: 239 IKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNA 269
           +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP     +N  ++  T   A
Sbjct: 205 VQLS-QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVA 264

BLAST of CmaCh04G013970 vs. TrEMBL
Match: A0A0A0KWP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G621940 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158
Identity = 301/315 (95.56%), Postives = 304/315 (96.51%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTESSYVSSPEAP KRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QSQSGARIQLSRNHEFFPGTTDRIIMVSG+INEILKAMELVLAKLLSELHAEE DD EPR
Sbjct: 61  QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           TKVRLIVPHSSCGAIIGKGGSTIK+FIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQ
Sbjct: 121 TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNS 288
           MRATDLIVSKLSEDPHYTQSMNYPFSYPTS+NAMN   N    GGTGGRFQNNKEERNNS
Sbjct: 181 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNG---GGTGGRFQNNKEERNNS 240

Query: 289 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348
           LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA
Sbjct: 241 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 300

Query: 349 AESMILQKVAYASER 364
           AESMILQKVAYASER
Sbjct: 301 AESMILQKVAYASER 312

BLAST of CmaCh04G013970 vs. TrEMBL
Match: D7TM15_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g05360 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 2.3e-133
Identity = 255/315 (80.95%), Postives = 284/315 (90.16%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MES ES+YVSSPE P KRS PP +SP SD MEK+TYIRFLVSNAAAGSVIGKGGSTINDF
Sbjct: 49  MESPESAYVSSPEVPPKRSSPP-RSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 108

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QSQSGARIQLSRNHEFFPGT+DRIIM+SG  NEI+KAMEL+LAKLLSE+H E+ D+A+PR
Sbjct: 109 QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPR 168

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           +KVRLIVP+SSCG IIGKGGSTIK+FIEDSQA IKISPQDNNY+G TDRLVTL G++EEQ
Sbjct: 169 SKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQ 228

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNS 288
           MRA DLI+SKL+EDPHYTQ MN PFSY  +YN+MN   N     G GG+FQNNKE+R+NS
Sbjct: 229 MRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPN-----GAGGKFQNNKEDRSNS 288

Query: 289 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348
           +TIGV+D HIGLVVGRGGRNI++ISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA
Sbjct: 289 VTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348

Query: 349 AESMILQKVAYASER 364
           AESMI+QKVA ASER
Sbjct: 349 AESMIMQKVASASER 357

BLAST of CmaCh04G013970 vs. TrEMBL
Match: A0A061FNH4_THECC (Binding to TOMV RNA 1L (Long form) isoform 1 OS=Theobroma cacao GN=TCM_043373 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 4.0e-133
Identity = 251/318 (78.93%), Postives = 287/318 (90.25%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTESSYVSSPEA  KRSPPPPKSP S+  EK TYIRFLVSNAAAGSVIGKGGSTI +F
Sbjct: 1   MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QS+SGARIQLSRNHEFFPGT+DRIIM+SGTI+E+LKAMEL+LAKLL+EL+ E+ DD EPR
Sbjct: 61  QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           TKVRLIVP+SSCG+IIGKGG+TIK+FIEDSQAGIKISPQDNN+ G  DRLVTL+GT++EQ
Sbjct: 121 TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNS 288
           MRA DLI+SKLSEDPHY Q+M+ PFSY  +YN+M+   N     G GG+FQN+KE+R+NS
Sbjct: 181 MRAIDLILSKLSEDPHYLQAMHAPFSYAATYNSMSYPSN-----GAGGKFQNHKEDRSNS 240

Query: 289 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348
           +TIGV+DGHIGLV+GRGGRNI+EISQ SGARIKISDRGDFMSGTTDRKVTITGSQRAIR 
Sbjct: 241 VTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQ 300

Query: 349 AESMILQKVAYASERHSD 367
           AESMI+QKVAYA++R  D
Sbjct: 301 AESMIMQKVAYATDRVMD 313

BLAST of CmaCh04G013970 vs. TrEMBL
Match: A0A067L9D4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01571 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 3.4e-132
Identity = 247/318 (77.67%), Postives = 285/318 (89.62%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTESSYVSSPEAP KRSPPPPKSP S+++E+ TYIRFLVSNAAAGSVIGKGG+TI DF
Sbjct: 1   MESTESSYVSSPEAPRKRSPPPPKSPTSESIERPTYIRFLVSNAAAGSVIGKGGATITDF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QSQSGARIQLSRN+EFFPGT+DRIIM+SGT++E+LKA+EL+LAKLL+ELH E+ DD +P+
Sbjct: 61  QSQSGARIQLSRNYEFFPGTSDRIIMISGTLDEVLKAVELILAKLLNELHTEDGDDIDPK 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           TKVRLIVP+SSCG+IIGKGGS IK+FIE+SQAGIKISPQDNN+ G  DRLVTL+GT+EEQ
Sbjct: 121 TKVRLIVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTLNGTLEEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNS 288
           MRA DLI+SKL EDPHY+Q+M+ PFSY  +YN+MN   N     G GG+FQN+KE+R NS
Sbjct: 181 MRAIDLILSKLVEDPHYSQTMHAPFSYAVAYNSMNYGPNGA---GPGGKFQNSKEDRTNS 240

Query: 289 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348
           +TIG++D HIGLVVGRGGRNI+EISQ SGARIKISDRGDFMSGT DRK+TITGSQRAIRA
Sbjct: 241 VTIGIADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKITITGSQRAIRA 300

Query: 349 AESMILQKVAYASERHSD 367
           AE MI QKVAYASER  D
Sbjct: 301 AEGMIRQKVAYASERGGD 315

BLAST of CmaCh04G013970 vs. TrEMBL
Match: A0A061FPQ0_THECC (Binding to TOMV RNA 1L (Long form) isoform 6 OS=Theobroma cacao GN=TCM_043373 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 9.9e-132
Identity = 251/319 (78.68%), Postives = 287/319 (89.97%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTESSYVSSPEA  KRSPPPPKSP S+  EK TYIRFLVSNAAAGSVIGKGGSTI +F
Sbjct: 1   MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QS+SGARIQLSRNHEFFPGT+DRIIM+SGTI+E+LKAMEL+LAKLL+EL+ E+ DD EPR
Sbjct: 61  QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           TKVRLIVP+SSCG+IIGKGG+TIK+FIEDSQAGIKISPQDNN+ G  DRLVTL+GT++EQ
Sbjct: 121 TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSY-PTSYNAMNNAMNSGSNGGTGGRFQNNKEERNN 288
           MRA DLI+SKLSEDPHY Q+M+ PFSY   +YN+M+   N     G GG+FQN+KE+R+N
Sbjct: 181 MRAIDLILSKLSEDPHYLQAMHAPFSYAAATYNSMSYPSN-----GAGGKFQNHKEDRSN 240

Query: 289 SLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIR 348
           S+TIGV+DGHIGLV+GRGGRNI+EISQ SGARIKISDRGDFMSGTTDRKVTITGSQRAIR
Sbjct: 241 SVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIR 300

Query: 349 AAESMILQKVAYASERHSD 367
            AESMI+QKVAYA++R  D
Sbjct: 301 QAESMIMQKVAYATDRVMD 314

BLAST of CmaCh04G013970 vs. TAIR10
Match: AT5G04430.2 (AT5G04430.2 binding to TOMV RNA 1L (long form))

HSP 1 Score: 394.4 bits (1012), Expect = 9.5e-110
Identity = 213/335 (63.58%), Postives = 266/335 (79.40%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTES    SPE   KRSP P  S  +D+ EK T+IRFLVSNAAAGSVIGKGGSTI +F
Sbjct: 1   MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           Q++SGARIQLSRN EFFPGTTDRIIM+SG+I E++  +EL+L KL SELHAE+ ++ EPR
Sbjct: 61  QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
            ++RL+VP+SSCG IIGKGG+TIK+FIE+S+AGIKISP DN + G +DRLVTLSGT EEQ
Sbjct: 121 RRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSY-----------------PTSYNAMNNAMNSGSN 288
           MRA DLI++KL+ED HY+Q+++ P+SY                 P+   A  N++N   N
Sbjct: 181 MRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPN 240

Query: 289 GGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSG 348
            G+GG++QN+KEE + ++TIGV+D HIGLV+GRGGRNI+EI+Q +GARIKISDRGDFMSG
Sbjct: 241 -GSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSG 300

Query: 349 TTDRKVTITGSQRAIRAAESMILQKVAYASERHSD 367
           TTDRKV+ITG QRAI+ AE+MI QKV  A+ER +D
Sbjct: 301 TTDRKVSITGPQRAIQQAETMIKQKVDSATERTTD 334

BLAST of CmaCh04G013970 vs. TAIR10
Match: AT1G33680.1 (AT1G33680.1 KH domain-containing protein)

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-14
Identity = 57/165 (34.55%), Postives = 90/165 (54.55%), Query Frame = 1

Query: 81  KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTIN 140
           ++T  R  V ++  G++IGKGG  +   Q  SGA+IQ+ R+ E  P +  R + + GT++
Sbjct: 230 QSTTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVS 289

Query: 141 EILKAMELVLAKLLSELHAEEVDDAEPR---TKVRLIVPHSSCGAIIGKGGSTIKTFIED 200
            I KA +L+ A +++E+ A  V     R    ++ + VP    G IIG+GG TIK     
Sbjct: 290 CIEKAEKLINA-VIAEVEAGGVPALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTK 349

Query: 201 SQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSED 243
           S+A I++ PQ N    S +R V +SG   +   AT LI   + +D
Sbjct: 350 SRARIQLIPQ-NEGDASKERTVRISGDKRQIDIATALIKDVMYQD 392

BLAST of CmaCh04G013970 vs. TAIR10
Match: AT4G10070.1 (AT4G10070.1 KH domain-containing protein)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-12
Identity = 59/200 (29.50%), Postives = 97/200 (48.50%), Query Frame = 1

Query: 72  KSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDR 131
           KS    +  ++T  R  V ++  G +IGKGG TI   Q  SGA+IQ+ R+ E  P +  R
Sbjct: 165 KSQKEVDGTQSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALR 224

Query: 132 IIMVSGTINEILKAMELVLAKLLSELHA----EEVDDAEPRT-------KVRLIVPHSSC 191
            + + G++   +++ E +++ +++E  A      V    P T       ++ + VP+   
Sbjct: 225 PVEIIGSV-ACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKV 284

Query: 192 GAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLS 251
           G IIG+GG TIK     S A  ++ PQ     G  +R V +SG   +   ATD+I   ++
Sbjct: 285 GLIIGRGGETIKNMQTRSGARTQLIPQHAEGDGLKERTVRISGDKMQIDIATDMIKDVMN 344

Query: 252 EDPHYTQSMNYPFSYPTSYN 261
           ++         P SY   YN
Sbjct: 345 QNAR-------PSSYSGGYN 356

BLAST of CmaCh04G013970 vs. TAIR10
Match: AT3G04610.1 (AT3G04610.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-10
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 1

Query: 83  TYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG----- 142
           T  R LV     GS+IG+ G  I     ++ ARI++       PGTT+R +MVSG     
Sbjct: 187 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGP---PGTTERAVMVSGKEEPE 246

Query: 143 -TINEILKAMELVLAKLLSELHAEEVDDAEPRTKV--RLIVPHSSCGAIIGKGGSTIKTF 202
            ++   +  +  V  +++  L  E    A P +KV  RL+VP S  G++IGK G T+K  
Sbjct: 247 SSLPPSMDGLLRVHMRIVDGLDGE-ASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAI 306

Query: 203 IEDSQAGIKISPQDN--NYMGSTDRLVTLSGTIEEQMRATDLIVSKL 240
            E S   +++   ++   +    DR+V + G      RA +LI S L
Sbjct: 307 QEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349

BLAST of CmaCh04G013970 vs. TAIR10
Match: AT5G46190.1 (AT5G46190.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-10
Identity = 90/368 (24.46%), Postives = 153/368 (41.58%), Query Frame = 1

Query: 72  KSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDR 131
           K  N D++      R L  +   GSVIGK G  IN  + ++ ARI++    + FPG ++R
Sbjct: 35  KIDNKDDL--VVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSER 94

Query: 132 IIMVSGTINE------------------------ILKAMELVLAKLLSELHAEEVDDAEP 191
           +I +  +++E                        +LK  + ++A L +     ++D  + 
Sbjct: 95  VITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDF 154

Query: 192 RTKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGST-----DRLVTLS 251
           R + RL+VP S C  +IGK GS IK     ++A +K+  +D +    T     D +V +S
Sbjct: 155 R-ECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMIS 214

Query: 252 GTIEEQMRATDLI------VSKLSEDPHYTQSMNYPFS---------YPTS--YNAMNNA 311
           G  E   +A   +      VS   + P  T     P S         YP +  Y + ++ 
Sbjct: 215 GETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSI 274

Query: 312 MNSGSNGGT--GGRFQNNKEERNNSLTIG-------------------------VSDGHI 367
              G+N  +  G   Q   E   N + +                           S   I
Sbjct: 275 FQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKI 334

BLAST of CmaCh04G013970 vs. NCBI nr
Match: gi|659091924|ref|XP_008446807.1| (PREDICTED: RNA-binding protein Nova-2 [Cucumis melo])

HSP 1 Score: 571.2 bits (1471), Expect = 1.6e-159
Identity = 303/315 (96.19%), Postives = 306/315 (97.14%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTESSYVSSPEAP KRSPPPPKSPNSDNM+KATYIRFLVSNAAAGSVIGKGGSTINDF
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSDNMDKATYIRFLVSNAAAGSVIGKGGSTINDF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QSQSGARIQLSRNHEFFPGTTDRIIMVSG+INEILKAMELVLAKLLSELHAEE DD EPR
Sbjct: 61  QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           TKVRLIVPHSSCGAIIGKGGSTIK+FIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQ
Sbjct: 121 TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNS 288
           MRATDLIVSKLSEDPHYTQSMNYPFSYPTSY    NAMN GSNGGTGGRFQNNKEERNNS
Sbjct: 181 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSY----NAMNYGSNGGTGGRFQNNKEERNNS 240

Query: 289 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348
           LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA
Sbjct: 241 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 300

Query: 349 AESMILQKVAYASER 364
           AESMILQKVAYASER
Sbjct: 301 AESMILQKVAYASER 311

BLAST of CmaCh04G013970 vs. NCBI nr
Match: gi|778706457|ref|XP_011655857.1| (PREDICTED: RNA-binding protein Nova-2 isoform X2 [Cucumis sativus])

HSP 1 Score: 567.8 bits (1462), Expect = 1.8e-158
Identity = 301/315 (95.56%), Postives = 304/315 (96.51%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTESSYVSSPEAP KRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QSQSGARIQLSRNHEFFPGTTDRIIMVSG+INEILKAMELVLAKLLSELHAEE DD EPR
Sbjct: 61  QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           TKVRLIVPHSSCGAIIGKGGSTIK+FIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQ
Sbjct: 121 TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNS 288
           MRATDLIVSKLSEDPHYTQSMNYPFSYPTS+NAMN   N    GGTGGRFQNNKEERNNS
Sbjct: 181 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNG---GGTGGRFQNNKEERNNS 240

Query: 289 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 348
           LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA
Sbjct: 241 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA 300

Query: 349 AESMILQKVAYASER 364
           AESMILQKVAYASER
Sbjct: 301 AESMILQKVAYASER 312

BLAST of CmaCh04G013970 vs. NCBI nr
Match: gi|449449385|ref|XP_004142445.1| (PREDICTED: RNA-binding protein Nova-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 559.7 bits (1441), Expect = 4.8e-156
Identity = 301/325 (92.62%), Postives = 304/325 (93.54%), Query Frame = 1

Query: 49  MESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 108
           MESTESSYVSSPEAP KRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 60

Query: 109 QSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPR 168
           QSQSGARIQLSRNHEFFPGTTDRIIMVSG+INEILKAMELVLAKLLSELHAEE DD EPR
Sbjct: 61  QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPR 120

Query: 169 TKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQ 228
           TKVRLIVPHSSCGAIIGKGGSTIK+FIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQ
Sbjct: 121 TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQ 180

Query: 229 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNK------ 288
           MRATDLIVSKLSEDPHYTQSMNYPFSYPTS+NAMN   N G   GTGGRFQNNK      
Sbjct: 181 MRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGG---GTGGRFQNNKPDTRSS 240

Query: 289 ----EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVT 348
               EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVT
Sbjct: 241 EIVQEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVT 300

Query: 349 ITGSQRAIRAAESMILQKVAYASER 364
           ITGSQRAIRAAESMILQKVAYASER
Sbjct: 301 ITGSQRAIRAAESMILQKVAYASER 322

BLAST of CmaCh04G013970 vs. NCBI nr
Match: gi|1009119990|ref|XP_015876680.1| (PREDICTED: protein BTR1 isoform X6 [Ziziphus jujuba])

HSP 1 Score: 516.2 bits (1328), Expect = 6.1e-143
Identity = 273/334 (81.74%), Postives = 296/334 (88.62%), Query Frame = 1

Query: 37  RRRRRREGGGR----RMESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNA 96
           +    +EGGG      MESTESSYVSSPEAP KRSPPPPKSP SD+MEK TY++FLVSNA
Sbjct: 2   KEEENKEGGGEGERGEMESTESSYVSSPEAPRKRSPPPPKSPTSDSMEKPTYLKFLVSNA 61

Query: 97  AAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAK 156
           AAGSVIGKGG+TI DFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEI+KAM+L+LAK
Sbjct: 62  AAGSVIGKGGATITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEIIKAMDLILAK 121

Query: 157 LLSELHAEEVDDAEPRTKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYM 216
           LLSELH EE DDAE RTKVRLIVP+SSCG IIGKGGSTIK+FIEDSQAGIKISPQDNNY 
Sbjct: 122 LLSELHTEESDDAELRTKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQAGIKISPQDNNYF 181

Query: 217 GSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNG 276
           G  DRLVTL+GT+EEQ+RA DLI+SKL+EDPHY QSMN PFSYP  YNAM+   N     
Sbjct: 182 GLNDRLVTLTGTLEEQLRAIDLIISKLAEDPHYVQSMNAPFSYPAPYNAMSYGPN----- 241

Query: 277 GTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGT 336
           G GG+FQN KE+RNNS+TIGV+DGHIGLVVGRGGRNI+EISQASGARIKISDRGDFMSGT
Sbjct: 242 GAGGKFQNTKEDRNNSVTIGVADGHIGLVVGRGGRNIMEISQASGARIKISDRGDFMSGT 301

Query: 337 TDRKVTITGSQRAIRAAESMILQKVAYASERHSD 367
           TDRKVTITGSQRAIRAAESMI+QKVAYASER  D
Sbjct: 302 TDRKVTITGSQRAIRAAESMIMQKVAYASERVMD 330

BLAST of CmaCh04G013970 vs. NCBI nr
Match: gi|1009119988|ref|XP_015876679.1| (PREDICTED: protein BTR1 isoform X5 [Ziziphus jujuba])

HSP 1 Score: 511.5 bits (1316), Expect = 1.5e-141
Identity = 273/335 (81.49%), Postives = 296/335 (88.36%), Query Frame = 1

Query: 37  RRRRRREGGGR----RMESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNA 96
           +    +EGGG      MESTESSYVSSPEAP KRSPPPPKSP SD+MEK TY++FLVSNA
Sbjct: 2   KEEENKEGGGEGERGEMESTESSYVSSPEAPRKRSPPPPKSPTSDSMEKPTYLKFLVSNA 61

Query: 97  AAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAK 156
           AAGSVIGKGG+TI DFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEI+KAM+L+LAK
Sbjct: 62  AAGSVIGKGGATITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEIIKAMDLILAK 121

Query: 157 LLSELHAEEVDDAEPRTKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYM 216
           LLSELH EE DDAE RTKVRLIVP+SSCG IIGKGGSTIK+FIEDSQAGIKISPQDNNY 
Sbjct: 122 LLSELHTEESDDAELRTKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQAGIKISPQDNNYF 181

Query: 217 GSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNG 276
           G  DRLVTL+GT+EEQ+RA DLI+SKL+EDPHY QSMN PFSYP  YNAM+   N     
Sbjct: 182 GLNDRLVTLTGTLEEQLRAIDLIISKLAEDPHYVQSMNAPFSYPAPYNAMSYGPN----- 241

Query: 277 GTGGRFQNNK-EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSG 336
           G GG+FQN K E+RNNS+TIGV+DGHIGLVVGRGGRNI+EISQASGARIKISDRGDFMSG
Sbjct: 242 GAGGKFQNTKQEDRNNSVTIGVADGHIGLVVGRGGRNIMEISQASGARIKISDRGDFMSG 301

Query: 337 TTDRKVTITGSQRAIRAAESMILQKVAYASERHSD 367
           TTDRKVTITGSQRAIRAAESMI+QKVAYASER  D
Sbjct: 302 TTDRKVTITGSQRAIRAAESMIMQKVAYASERVMD 331

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BTR1_ARATH1.9e-11266.98Protein BTR1 OS=Arabidopsis thaliana GN=BTR1 PE=1 SV=1[more]
NOVA1_MACFA4.7e-2634.38RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2 SV=1[more]
NOVA1_RAT4.7e-2635.00RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1 PE=2 SV=1[more]
NOVA2_HUMAN1.4e-2536.80RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1[more]
NOVA1_MOUSE5.4e-2231.17RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KWP6_CUCSA1.2e-15895.56Uncharacterized protein OS=Cucumis sativus GN=Csa_5G621940 PE=4 SV=1[more]
D7TM15_VITVI2.3e-13380.95Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g05360 PE=4 SV=... [more]
A0A061FNH4_THECC4.0e-13378.93Binding to TOMV RNA 1L (Long form) isoform 1 OS=Theobroma cacao GN=TCM_043373 PE... [more]
A0A067L9D4_JATCU3.4e-13277.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01571 PE=4 SV=1[more]
A0A061FPQ0_THECC9.9e-13278.68Binding to TOMV RNA 1L (Long form) isoform 6 OS=Theobroma cacao GN=TCM_043373 PE... [more]
Match NameE-valueIdentityDescription
AT5G04430.29.5e-11063.58 binding to TOMV RNA 1L (long form)[more]
AT1G33680.12.6e-1434.55 KH domain-containing protein[more]
AT4G10070.12.4e-1229.50 KH domain-containing protein[more]
AT3G04610.11.0e-1031.74 RNA-binding KH domain-containing protein[more]
AT5G46190.11.3e-1024.46 RNA-binding KH domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|659091924|ref|XP_008446807.1|1.6e-15996.19PREDICTED: RNA-binding protein Nova-2 [Cucumis melo][more]
gi|778706457|ref|XP_011655857.1|1.8e-15895.56PREDICTED: RNA-binding protein Nova-2 isoform X2 [Cucumis sativus][more]
gi|449449385|ref|XP_004142445.1|4.8e-15692.62PREDICTED: RNA-binding protein Nova-2 isoform X1 [Cucumis sativus][more]
gi|1009119990|ref|XP_015876680.1|6.1e-14381.74PREDICTED: protein BTR1 isoform X6 [Ziziphus jujuba][more]
gi|1009119988|ref|XP_015876679.1|1.5e-14181.49PREDICTED: protein BTR1 isoform X5 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046719 regulation by virus of viral protein levels in host cell
biological_process GO:0008380 RNA splicing
biological_process GO:0009735 response to cytokinin
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G013970.1CmaCh04G013970.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 81..154
score: 1.1E-11coord: 285..358
score: 5.3E-14coord: 167..240
score: 8.6
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 84..155
score: 1.7E-19coord: 168..243
score: 1.6E-19coord: 289..361
score: 1.3
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 171..236
score: 5.2E-12coord: 85..150
score: 1.3E-13coord: 290..354
score: 8.9
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 168..235
score: 15.493coord: 82..149
score: 16.353coord: 286..353
score: 17
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 288..360
score: 2.34E-16coord: 83..156
score: 2.92E-17coord: 170..244
score: 1.33
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 43..429
score: 8.2E
NoneNo IPR availablePANTHERPTHR10288:SF142PASILLA, ISOFORM Dcoord: 43..429
score: 8.2E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G013970CmaCh18G009220Cucurbita maxima (Rimu)cmacmaB402