CmaCh04G013970.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTAAACCACTTTTCGAGGTGAATTTGTAAGTTACCTTATCAACTGCAGCAAACCCGATACTAGACTAAGCTCCACTCAATCTAAAAGGATCGAAGTCTGAGTAAGACCAACGCTATTGAAGCTTGACCGAAAGACTATATAGCTATTAAATAGGCGACACTCAATCACACGAGCAATTAAGAAATTAGTGCGAATAATCGAATCGAGTTATAAATTTTGGACAATAATTTTACTTTATAAGCTTTAAAAATTTGGGATATTAAATAAATACTTTGGAACAAAGAAAAAAAGAAGAAGAATATATTACTCTAATTTGGAAAGGTGGATCTTCTACTTAACCCTAATAATTACGTAAAGGCTTACGTTCTCGCAGATAAGGGTTTTCGCGCCCCCAAAATATCCTTATTATTAAAAAAGAAAAAGAAGAAAAAGAAAAAAATTGCATTTTTTTAGACAAATCCAATAAAATAATTAAATAGACAAAAATAAAAAGGAAAAATATAACTGCATATTCAACCTGAGCTTCCATTTTGGCTTTGGTGTTGAACGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCTTCTTCCCCATTTATCAACTACTCTGCAACTCTATCTCTCTTTCTATCTAGCCGCCGCCGCCGCCGCCGCCGTGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCCTCATACGTCTCGTCTCCGGAGGCACCTACGAAACGATCTCCACCGCCGCCAAAATCTCCGAACTCAGGTATCTGATCTGATTTTAATCGCTCTTTTACTGTCATTTTCAACATTTTGATTCCTACTCTCACTGTTTTGTAAGAATTGTGTATGCTTGGAGCTGTTCTTGTATGCGAGTGTTTTTGTTTCAGATCGGTTTGTTTGACGAATGTTGCAATTGCGTCTCTCTCTCTCTCTTTGTTCAACCTTCTTGTTTTTCTCATTATTTTTTGAATTTAAACCCTTGCCTTAAGTGTTTTGTTTGATTTATTTGTGCGGTCGGAGGGAATGAGAAATCGTGCAATTTCGACCTCCAATGGCCTGGACACTCCTGCTTCTTTGCCTGGAAAGCTTAGAAGAAGAGAGTCTGACTTCTGGTAGGGCTTTTTTGTTTTTGGTGTGGGGGAAGGATTAGTCTATTGAGATTTATCACAGTTGACCGAATGAATTGGGGAGCAGTTGTCATTTTCTTGAAGTGCCATTGCCACCGGTTCATCCGTCGATTGACAACAAGCGCACTGCGTCTCCTGGTGTATGTCATAATAGTCGAAAGTTCGCTATCTTTGGTGATTGGACAGCAAGTTGAAAAAGGATAAGTTTCATTTGTTCAAGCAGAGTATTTAAACTGTCTTTTAACCATTTGTTCTTCTATAATTTCATGAAGGCAGCTGAACGTTGAATGCTCTTTGGACATGACGAACTTGTTTTTCCCGTGTATTTCCATTTTAATTCCTGAAATTGCCTCAATGAGAATCTGTATGACGATTTCTTCTAATAATAGGGATAGGATGTAGATAAAACCTTTCCTCAATTCTTCTTTATCATTGATGTTTATCATTTTTTCTTTTGTGAAAACGCAGTAAATAGTCTTATGTAAAATTTGATGTGAAAGCAAGGATTCATAAGACGTTCTATATTTACCACCTACACAGGAATATGCACGATTCTTTACAATGTATAATTATGATTTATATCAAAGGCTTTAGCTCTGTCACATTCTCAACATTGTAGATTAATTTATTAATAGGATCTACATACATTTCTAATTGTTGGTGCATATATGCCGTACATTTTGCGGATATCAAGATTACTTCCTTTTCTGCTTATGAATGTTGTCTCAGTCATCCTAATTGTTATTGTCAGATAATATGGAAAAGGCTACATATATTAGGTTTCTGGTATCAAACGCTGCAGCTGGTTCTGTAATTGGGAAAGGTGGTTCAACAATTAATGATTTCCAGTCACAATCTGGTGCACGAATCCAGTTGTCACGAAATCATGAATTTTTCCCTGGAACCACTGATAGGATCATTATGGTATCTGGAACAATAAATGAAATACTGAAGGCCATGGAACTCGTTCTTGCCAAGTTGTTGAGTGAGGTAACCACTATGTAGTACAAGTTCACTCTAGAATTTAAATGTTCACTGTTTATGATTGATTAAAATTGTGTTTTCTTGTAGCTTCACGCTGAAGAAGTAGATGATGCTGAACCGAGAACAAAAGTGAGATTAATCGTTCCCCATAGTTCATGTGGTGCTATAATTGGCAAAGGAGGATCCACTATAAAGTACGATGATTATTCCTTATTTTTCTAACCCATGGTTACTAATTGCTTTATAATTTACTAGCTTAAACGGTTTATTATTAATTATAATTCGGTTAAATTATTAGTTTAGCCCAAATTGTAAAAGTGCCTAATTGATACTTGATCTTTTAATTATGTGTTTAATTATGTGTCTAATAGGTCCATACATTTTCAACTTTGTGTCTATTAGGTTTGTGAATTTTAACAAAATATTAAAATAGGTCCAGGACCTATTAGACACAAAAAGAAAAGTTTATGGATCTATTAAACGCAAAATTGAAGTTTAGACTTTTTAAAATTTAGGGATCTATTAGACACAATCTATGATTTTAAGGTTTTAAGTATATTTATTTATTCAACTTACAGATCAGAAAAATAGTTGCTAAGTGAACATTTTTTTTATAGTTCCTTGAAGGTATTTTCTATTCAAATTTGCATGAGGGTTCACTTTCCTTGCACAGATTGTTAAACAACTGCTGGCTTGTTTATCTAGGAACTTTTCCCTTCAACTCTATGTCTATATAGGTAATTGTGTAGAATGCAGATTTAGATCCTATTATGCTAGTTCTTGTTTATGCTTTTATTGAAGGAGGTACACATTCTCGTCATAATCCGTTACTTTCAAGTTTCTCAGTCATGTCCAGGAAGAAAGTACCAATTGATAGCGCTGTTTTCTATTTGAACTCCACTTAATTACTGTTAAACATGGTTCAATCTAATACAGAACAGATTCTATGCTAGTAAGGTCACTCCTTTTTTTTTTCTTCTTTTCTTTTTTAAGAAACAAAATTGTATTAAGAGAAAAAGAAAGGAAAATACATCCTAGGGGCAGGGGGTTGAGTGAAATTCCTCCCACAAAAAAGCTAAAAGAAAGAGCTTTCCAACAGTTAAAAGTTGTAGAAGGATTGTAATTTCAAAAATAATTCTTGTGACTAAAACAAAAACTCTACCAAGAAATAGTAAGCTATATACTTCAACAAGAAAGTCTCAAAGAGGATGACGTATCTTCAAAGATCGTCTGATTTCTCTCCAGCCAATATTTGCCTTTTTGGACGCTTCCACCTCAAGAAACTTCAAGGAGCCAACCATCAATAGTCTTTGACAAGTAGCCACACACACACCAAATATGTTCGCTAGGGAATTCCACCCATTGACAGCAAAGGAGTGGAGAAACCAATGGTCTAAGTTCTCTCTTCATTCCTAAGACAGAGGCAACGAATTGAGGAAAACTGAGCCCAACTTTGACTGTTTCTTTAAAGCCAATCTTGAGTATTCTAACCTCTATGGGCTAAAGACCACATATTGAATTTGTTGTTGTGACAGAGCTCTAATGTGTTAAGTTTTATCAACCCATAAATGGTGTATGTTAGATGATAATTCCTCACAGGAAGCAAGTAATGGTATTGTAACAGTGTTGTTTAAGGATTTCAATCTTGCACGTGACTTTTGATTTGGACGACAAAATGGATTGCCTTAGGTTTTCATATCATGGTTAAGGAGTAAATGTTTGAGTATCAGACTCATTGTTGTGTTCGTGAGGTTAAAAAAAAAACAAAAAAATAGGAGAGAGAGTCTGCCCATAGATAGATGATCTCAACTTGTTGAGATTTAAGTATGGAATAGAAGGTTAAAGGATGGAAATAATTGTTGCCTCTAAGATGGTTATGCTGTCTTGTCTAAGCATATTGAGTGGCATTCCTTTCGTTTCATACACACATTGATTTAATGAGTGTACCTTTCCTACACCTACAGGATATGCATAAAACAGTTGTAGTTTATCTCAGTCAGGTAATTGAAGATTCCAGAACTATATGAAGAAAATTTGTTGCGTTGGATAAATGACTCGTAAATGAATAGGAAAAAGAAAAGGGAAAAGAAGAAACATAAGGGACAGAGTTTCCATAATCAGAGGAATTTGAAATTTACATAAATCATGCTTTATTACTCTGCTTCTTTTCTTGGCTAGAAGATGACCTAATCCTTGACTTTTTAAGAGCATCAAATAATCGTTCCATTGGCTTCTGATTCAGTTTAAAATTGTTGCCAAAGATTTGGTAATTTCTCAATAATTTTTTTCATCTTAACCATCCAAGTGTTAAAATAGCCATCTTAATAATAAAAGACTCAAAGGGAATGAGTTCAATTTATGGTGGCCACATTCTTACGAATTTATTATTTTAATATCCTACTATTATCTTTCCAACCAAATGTTATAGGATCAAATCGTTATCATGTGAGAATGTATGTTCTTGCCAAACCAAACACCCATGGATATAATTTATTTTTGTTTGCATCTTTGACTTCTTCTCTATCATTTTTCATTTGTGCACAATCATTTATTTGAATTCCAACTTTATCATTTGATTTTTATGTGAACATAGTATCATTTGATCTTTGGAGTGACAGGCCAACTTTATCAGCTGCTTAAGTTTTGAGATCTTTAAAATGTCTGATCATCAGAATTTCCAGAAGAAAAACTTCTGCTTATTTCGTGTGCACTACATCAGAAAATAAGACTGACAGTGACAGTTCCGATTATGATTCAACTTATCATTCCAAAGATTTTTTTCTCAACTTGATTTGCATTAATGATTTCTAGTGGTTAGTAGTATTTGGTTTTAAAACTTGTCAGCTGGTATTATTATTATTTCTTTTTTACATGAAACAGAACTTGTCGGCTGTTACTGCTTTGGCCAAATTCCAATTATCTTTTTGGTGTTTCTTGATTTGTCTTGTAACTATACCTCCTTTGTAATTAACGCAAGTTTGGTTAGTTCCTTGGAAACTCCCAATGGAGGTTAATAGTTAGGTTATGTCTTTAGGTAACTTTCCATCTAATCGACAAAAAATCAGTCTGATTGAAAACTTGTATTCTGTCACTTATGGTTGCCTACCTTAAAAACACCCATAAAAGTGTGTTTTTGGGCACTAACGCACCAGTACCATTATGCAGGACATTTATTGAGGACTCTCAAGCTGGCATTAAGATATCACCACAAGATAATAACTATATGGGATCCACTGATAGGCTGGTGACGCTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCAAAGCTATCTGAGGATCCACATTACACCCAGTCAATGAATTATCCATTTTCATACCCGAGTATGTCTTTATTTAGCTTTTCTATTTCATTGTGGTATTATATTTTTCCGAACAAAAACTATTAAATGCTCACTTGCATTTTGTGGTTCACAAAATGTCCATCTTTTTTGGGGCACTTTCTTTCATCTGCTATATGTGATGCTGTTGTCTTATCTTTGTTATGACACGAGTAATTTATGTTTTTATGCAAATCAAACAGGTAGTGTAGTTGAAGGTTTAAATCACAACTGAAGAAAAATATTTATACTTAAGAAAAAGAAGGACAAGATGAATAACTAGTTTTCCCGCATGTAAATTCTTGCTGTTTTCGTTATTTTCCTTAGCCATTTAATCTTTTACTTGCTTTTGCTACAGCATCATACAATGCTATGAACAATGCTATGAACTCCGGATCCAACGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGTTTGTGATACCATGGCAATTTATATCGTTATTATGAGATTTTCCAGAAAGTAATTGAGAAATAATTAACGATGGTTTTATGTGGATGATAGATTATATTGTCTGAACAACATTCCCATGCCATGCGTAGTATTAACTAATATAGTTGATGTTGACGATAAAATGACTTAAATCTCATCAATGTGAGGCTTCTGTTATTTTATGACTTTCTTACATTCAAGAATTTCCTGATGCCAAAATTAGGCAGTAAATATGTTCCTTTGATACTGGATTTCTTTATCAATGAGCAAACATTCACTGCGACAAAAGGCTAAATTGCAGAACAATGTGGATTAGCTGTTCAACTTTCAGTAGGGTAAACAGAAGCGAAGTAATGAAGAAAAAGAAAAGAGTGAAAACAGGATAGCAAGTAAATGAAACCATTTATCATGGTGCAGAACTCAATTGAGCTTCATGAAAAAACCGTAGATAGCCTTCCTGTATTATGCTCTGAAAGAGAAATTTTATGCATTTTCTGTTTTTTGTTGCTGTTTAATCCATCTGTTTGTTGCTGTTTAATCCGTCCTTTCGTTGCTGTTTAATCTGTCTTTTTGTTGCTGTTTAATCTGTCTTTTTGTTGCTGTTAATCCGTCCCTGTAGATAAGTGGAATCTAGATACTGGTTTTCTCTTTTTAACAACTATGTTTCTCTCTATCCCCCCAACTAACTGCTGAAAAAGTGTTTACAATGCATGCAACTGCATGAAATGAGGACTTTATGCAATTGCACATATATATTTCTTATACTTCTCTGTGACTTTATGATATTGCTGACAGAAGATCTTTTGAAATTGTCTAGGAGGAACGGAATAACTCCTTGACTATTGGTGTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGTTTGTGTAAACCCCTCCACCTCCAACGCGTCCTATTTCCTTTCCGTGCAAGGTTGATAGTATTCAAGTCACAAATGTTACTCCATGTATTACTTTTTTACATTCAAAAGCGTTTCTTATTACAGGCTAGTGGTGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGTACAGAGGTTCTTTTGATATATTTACTCCCTTTATACTGTTGGTCTGTAAGTTCTTCATGGTAACAGTTGTATACTTGATCTGGAAAAGAAATGGGAAAATTTTAGGGAAATATGCAACTGTTACCATGAAGTCAAAGGACTCCAGTGAAGCAAAATAAAACGTAATGGATAATTATAAAAGTCTTTACATGCAGAGAACCAAAGAGAGGCATGATATGTAAAGATTCTTGTAATTATCCATTAGGTTTTATCTTGTTTGATTGGAGCCTTTCTTAGACCAGCCGACTCTTTTAGGATGTTTCTTTTTATTAAATTACAAGTTTAGTTCGTGCAATTTGAGGTCTTTTGTCTGTTCGAAACAAATACAAGTCAAAACTTAATTTCATTTTATGTCTAATAGAACCCTTTTCAATTATATGTCTAGTACATATGTGAATTTTAAATAGTTTGTAAATTTGGAATATTAGAGACTAAATTGGTACAAATCTCAAAGTTCAAGAACTAAAATTTTAATCGAACACATGCATACTTGATTGGTCCACAATTTGCAGGAAAGTAACGATTACTGGGTCACAAAGAGCAATCCGCGCTGCTGAATCGATGATTCTGCAGAAAGTAGCATATGCTTCTGAGAGGGTAATGCCTTTCAAATCCATTAACGATGCTTTGTACAGTTCTCTTACGATCTATAGCATTTTTTTCGTTATCGAATCGATGCAGGTTCTAGCACAGTGATAGAGTGGCGAAAGCTCTGAATGTTTGTAGAAGCAAGGCCGGGAGGTTTTCAGTTTTACCATTGAGGGAGAGCATGGCAATGGCAATGGAAATGAGAGGAAAAATAGAGTTAAGATTTCCTGGTACGTTGAGAGAGATACGCCATAATTTGATTGATGAGCCAAATAGAAAGATTAGCAGTGTCAAAGTTGTTTATACAATTGTAGCTTTGAATTTATTTTATATTTATGTTTTGAGCTTTATCTCTATTATATTGTTTGAACCTGCCTTCTCTTCACAACAGATTGTAGCTTCTTAG ATGGATCTTAAACCACTTTTCGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCTTCTTCCCCATTTATCAACTACTCTGCAACTCTATCTCTCTTTCTATCTAGCCGCCGCCGCCGCCGCCGCCGTGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCCTCATACGTCTCGTCTCCGGAGGCACCTACGAAACGATCTCCACCGCCGCCAAAATCTCCGAACTCAGATAATATGGAAAAGGCTACATATATTAGGTTTCTGGTATCAAACGCTGCAGCTGGTTCTGTAATTGGGAAAGGTGGTTCAACAATTAATGATTTCCAGTCACAATCTGGTGCACGAATCCAGTTGTCACGAAATCATGAATTTTTCCCTGGAACCACTGATAGGATCATTATGGTATCTGGAACAATAAATGAAATACTGAAGGCCATGGAACTCGTTCTTGCCAAGTTGTTGAGTGAGCTTCACGCTGAAGAAGTAGATGATGCTGAACCGAGAACAAAAGTGAGATTAATCGTTCCCCATAGTTCATGTGGTGCTATAATTGGCAAAGGAGGATCCACTATAAAGACATTTATTGAGGACTCTCAAGCTGGCATTAAGATATCACCACAAGATAATAACTATATGGGATCCACTGATAGGCTGGTGACGCTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCAAAGCTATCTGAGGATCCACATTACACCCAGTCAATGAATTATCCATTTTCATACCCGACATCATACAATGCTATGAACAATGCTATGAACTCCGGATCCAACGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGGAATAACTCCTTGACTATTGGTGTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGTGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGAAAGTAACGATTACTGGGTCACAAAGAGCAATCCGCGCTGCTGAATCGATGATTCTGCAGAAAGTAGCATATGCTTCTGAGAGGCACAGTGATAGAGTGGCGAAAGCTCTGAATGTTTGTAGAAGCAAGGCCGGGAGGTTTTCAGTTTTACCATTGAGGGAGAGCATGGCAATGGCAATGGAAATGAGAGGAAAAATAGAGTTAAGATTTCCTGGTACGTTGAGAGAGATACGCCATAATTTGATTGATGAGCCAAATAGAAAGATTAGCAGTGTCAAAGTTGTTTATACAATTGTAGCTTTGAATTTATTTTATATTTATGTTTTGAGCTTTATCTCTATTATATTGTTTGAACCTGCCTTCTCTTCACAACAGATTGTAGCTTCTTAG ATGGATCTTAAACCACTTTTCGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCTTCTTCCCCATTTATCAACTACTCTGCAACTCTATCTCTCTTTCTATCTAGCCGCCGCCGCCGCCGCCGCCGTGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCCTCATACGTCTCGTCTCCGGAGGCACCTACGAAACGATCTCCACCGCCGCCAAAATCTCCGAACTCAGATAATATGGAAAAGGCTACATATATTAGGTTTCTGGTATCAAACGCTGCAGCTGGTTCTGTAATTGGGAAAGGTGGTTCAACAATTAATGATTTCCAGTCACAATCTGGTGCACGAATCCAGTTGTCACGAAATCATGAATTTTTCCCTGGAACCACTGATAGGATCATTATGGTATCTGGAACAATAAATGAAATACTGAAGGCCATGGAACTCGTTCTTGCCAAGTTGTTGAGTGAGCTTCACGCTGAAGAAGTAGATGATGCTGAACCGAGAACAAAAGTGAGATTAATCGTTCCCCATAGTTCATGTGGTGCTATAATTGGCAAAGGAGGATCCACTATAAAGACATTTATTGAGGACTCTCAAGCTGGCATTAAGATATCACCACAAGATAATAACTATATGGGATCCACTGATAGGCTGGTGACGCTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTGATTGTCTCAAAGCTATCTGAGGATCCACATTACACCCAGTCAATGAATTATCCATTTTCATACCCGACATCATACAATGCTATGAACAATGCTATGAACTCCGGATCCAACGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGGAATAACTCCTTGACTATTGGTGTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGTGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGAAAGTAACGATTACTGGGTCACAAAGAGCAATCCGCGCTGCTGAATCGATGATTCTGCAGAAAGTAGCATATGCTTCTGAGAGGCACAGTGATAGAGTGGCGAAAGCTCTGAATGTTTGTAGAAGCAAGGCCGGGAGGTTTTCAGTTTTACCATTGAGGGAGAGCATGGCAATGGCAATGGAAATGAGAGGAAAAATAGAGTTAAGATTTCCTGGTACGTTGAGAGAGATACGCCATAATTTGATTGATGAGCCAAATAGAAAGATTAGCAGTGTCAAAGTTGTTTATACAATTGTAGCTTTGAATTTATTTTATATTTATGTTTTGAGCTTTATCTCTATTATATTGTTTGAACCTGCCTTCTCTTCACAACAGATTGTAGCTTCTTAG MDLKPLFESSFCERSATPSSPFINYSATLSLFLSSRRRRRRREGGGRRMESTESSYVSSPEAPTKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPRTKVRLIVPHSSCGAIIGKGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERHSDRVAKALNVCRSKAGRFSVLPLRESMAMAMEMRGKIELRFPGTLREIRHNLIDEPNRKISSVKVVYTIVALNLFYIYVLSFISIILFEPAFSSQQIVAS
BLAST of CmaCh04G013970.1 vs. Swiss-Prot
Match: BTR1_ARATH (Protein BTR1 OS=Arabidopsis thaliana GN=BTR1 PE=1 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.9e-112 Identity = 213/318 (66.98%), Postives = 265/318 (83.33%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. Swiss-Prot
Match: NOVA1_MACFA (RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.7e-26 Identity = 77/224 (34.38%), Postives = 131/224 (58.48%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. Swiss-Prot
Match: NOVA1_RAT (RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.7e-26 Identity = 77/220 (35.00%), Postives = 130/220 (59.09%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. Swiss-Prot
Match: NOVA2_HUMAN (RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.4e-25 Identity = 85/231 (36.80%), Postives = 134/231 (58.01%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. Swiss-Prot
Match: NOVA1_MOUSE (RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 5.4e-22 Identity = 77/247 (31.17%), Postives = 129/247 (52.23%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TrEMBL
Match: A0A0A0KWP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G621940 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158 Identity = 301/315 (95.56%), Postives = 304/315 (96.51%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TrEMBL
Match: D7TM15_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g05360 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.3e-133 Identity = 255/315 (80.95%), Postives = 284/315 (90.16%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TrEMBL
Match: A0A061FNH4_THECC (Binding to TOMV RNA 1L (Long form) isoform 1 OS=Theobroma cacao GN=TCM_043373 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 4.0e-133 Identity = 251/318 (78.93%), Postives = 287/318 (90.25%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TrEMBL
Match: A0A067L9D4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01571 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 3.4e-132 Identity = 247/318 (77.67%), Postives = 285/318 (89.62%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TrEMBL
Match: A0A061FPQ0_THECC (Binding to TOMV RNA 1L (Long form) isoform 6 OS=Theobroma cacao GN=TCM_043373 PE=4 SV=1) HSP 1 Score: 478.4 bits (1230), Expect = 9.9e-132 Identity = 251/319 (78.68%), Postives = 287/319 (89.97%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TAIR10
Match: AT5G04430.2 (AT5G04430.2 binding to TOMV RNA 1L (long form)) HSP 1 Score: 394.4 bits (1012), Expect = 9.5e-110 Identity = 213/335 (63.58%), Postives = 266/335 (79.40%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TAIR10
Match: AT1G33680.1 (AT1G33680.1 KH domain-containing protein) HSP 1 Score: 77.4 bits (189), Expect = 2.6e-14 Identity = 57/165 (34.55%), Postives = 90/165 (54.55%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TAIR10
Match: AT4G10070.1 (AT4G10070.1 KH domain-containing protein) HSP 1 Score: 70.9 bits (172), Expect = 2.4e-12 Identity = 59/200 (29.50%), Postives = 97/200 (48.50%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TAIR10
Match: AT3G04610.1 (AT3G04610.1 RNA-binding KH domain-containing protein) HSP 1 Score: 65.5 bits (158), Expect = 1.0e-10 Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. TAIR10
Match: AT5G46190.1 (AT5G46190.1 RNA-binding KH domain-containing protein) HSP 1 Score: 65.1 bits (157), Expect = 1.3e-10 Identity = 90/368 (24.46%), Postives = 153/368 (41.58%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. NCBI nr
Match: gi|659091924|ref|XP_008446807.1| (PREDICTED: RNA-binding protein Nova-2 [Cucumis melo]) HSP 1 Score: 571.2 bits (1471), Expect = 1.6e-159 Identity = 303/315 (96.19%), Postives = 306/315 (97.14%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. NCBI nr
Match: gi|778706457|ref|XP_011655857.1| (PREDICTED: RNA-binding protein Nova-2 isoform X2 [Cucumis sativus]) HSP 1 Score: 567.8 bits (1462), Expect = 1.8e-158 Identity = 301/315 (95.56%), Postives = 304/315 (96.51%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. NCBI nr
Match: gi|449449385|ref|XP_004142445.1| (PREDICTED: RNA-binding protein Nova-2 isoform X1 [Cucumis sativus]) HSP 1 Score: 559.7 bits (1441), Expect = 4.8e-156 Identity = 301/325 (92.62%), Postives = 304/325 (93.54%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. NCBI nr
Match: gi|1009119990|ref|XP_015876680.1| (PREDICTED: protein BTR1 isoform X6 [Ziziphus jujuba]) HSP 1 Score: 516.2 bits (1328), Expect = 6.1e-143 Identity = 273/334 (81.74%), Postives = 296/334 (88.62%), Query Frame = 1
BLAST of CmaCh04G013970.1 vs. NCBI nr
Match: gi|1009119988|ref|XP_015876679.1| (PREDICTED: protein BTR1 isoform X5 [Ziziphus jujuba]) HSP 1 Score: 511.5 bits (1316), Expect = 1.5e-141 Identity = 273/335 (81.49%), Postives = 296/335 (88.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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