CmaCh03G013840 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G013840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transcription factor bHLH144, putative
Location	Cma_Chr03 : 8761183 .. 8761932 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTTATGCAGAGTGACCTCAACTGCTACCTCAAAAACACGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTACTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGTAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTATGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCTTATAGTTCAGAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCTGCAACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTACCAAATGACAACAGTCACTGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTTGGAGTCGGGGGCTTGGAGAACTAA

mRNA sequence

ATGGACTTTATGCAGAGTGACCTCAACTGCTACCTCAAAAACACGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTACTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGTAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTATGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCTTATAGTTCAGAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCTGCAACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTACCAAATGACAACAGTCACTGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTTGGAGTCGGGGGCTTGGAGAACTAA

Coding sequence (CDS)

ATGGACTTTATGCAGAGTGACCTCAACTGCTACCTCAAAAACACGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTACTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGTAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTATGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCTTATAGTTCAGAACCCAGGAAGAATCAGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCTGCAACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTACCAAATGACAACAGTCACTGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTTGGAGTCGGGGGCTTGGAGAACTAA

Protein sequence

MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPLMEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

Homology

[Close]

BLAST of CmaCh03G013840 vs. Swiss-Prot
Match: BH144_ARATH (Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 105/252 (41.67%), Postives = 150/252 (59.52%), Query Frame = 1


Query: 12  LKNTMLPT-ANQGGDNHMQIPLSS--AFPSVLPTGRNNLGPFNTVEFQPSEVCPQNFIIF 71
           ++N   P  +++ GD +M  P +S  ++ ++ P       P++ VE QPS VCP+NF+IF
Sbjct: 1   MQNNQFPHFSDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIF 60

Query: 72  DHTDNRSQIMFHPAIANKLSG-PTANMCSKYIQKNFYVNDEHNDDS---REISSPLMEDL 131
           D T +RSQ+M+HP + +KL   P+ N  +   Q N YV   + +     +E+SS   ED 
Sbjct: 61  DQTYDRSQVMYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDP 120

Query: 132 DDIDALLSLED--EDHEDIDGYED----EEISTAR-SHLNYGNQSPDSSSSYSSEPRKNQ 191
           ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  S       N 
Sbjct: 121 NEIDALLSADEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNN 180

Query: 192 SFNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKD 250
           + +    LS S  SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK 
Sbjct: 181 NNSRKQSLSGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKI 240

[Close]

BLAST of CmaCh03G013840 vs. TrEMBL
Match: A0A0A0KLX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522710 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 6.9e-116
Identity = 221/251 (88.05%), Postives = 233/251 (92.83%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLN YLK    PTA QG DNHMQIPLSSAFPSVLP GR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPA+ANKLSGPTANMCSKYIQKNF VND+H++D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHED-REISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSS--YSSEPRKNQS 180
           MEDLDDIDALLSLE+E+HED+DG ED+E+STARSHLNYGNQSPDSSSS  YSS+PRKN S
Sbjct: 121 MEDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 180

Query: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
           FNPVHK SSSG SSCNSD+KQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKSSSSG-SSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 249

[Close]

BLAST of CmaCh03G013840 vs. TrEMBL
Match: W9RTH8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002862 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.8e-63
Identity = 138/249 (55.42%), Postives = 180/249 (72.29%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           M   Q+D   Y +    P   Q G+N+M IP++ AF + LP G  ++  F+ +EFQPSEV
Sbjct: 332 MQVCQNDNQFYPEMKAPPLEYQMGNNYMHIPVAPAFGADLPPGPMHMKHFHGIEFQPSEV 391

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CP+NFIIFD TD+RSQIMFHPAIA+K S P  NM + Y+  NF    E N ++REISS L
Sbjct: 392 CPRNFIIFDQTDHRSQIMFHPAIAHKFSSPGLNMGTAYVPSNFG-GKETNIEAREISSTL 451

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN 180
            ED DDIDALLSLE+E+ +    Y++EE+STAR++ NYG+ SP+S S+Y S+ +KN+S +
Sbjct: 452 REDSDDIDALLSLEEEEQK----YDEEEVSTARTYGNYGSSSPESCSNYGSKTKKNRSSS 511

Query: 181 PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240
            +H+ S    SSCN + K+ K+KKMVR L+ I+PGG QMTTVTVLDEAV+YLKSLK EVQ
Sbjct: 512 SIHRSSDGASSSCNDERKRQKMKKMVRALKGIVPGGNQMTTVTVLDEAVQYLKSLKVEVQ 571

Query: 241 KLGVGGLEN 250
           KLGVG L +
Sbjct: 572 KLGVGNLRD 575

[Close]

BLAST of CmaCh03G013840 vs. TrEMBL
Match: A0A126G8M8_MORAL (Basic helix-loop-helix 144-like protein transcript variant 1 OS=Morus alba PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.4e-62
Identity = 135/246 (54.88%), Postives = 180/246 (73.17%), Query Frame = 1


Query: 4   MQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEVCPQ 63
           MQ+D   Y +    P   Q G+N+M IP++ A+ + LP G  ++  F+ +EFQPSEVCP+
Sbjct: 1   MQNDNQFYPEMKAPPLEYQMGNNYMHIPVAPAYGADLPPGPMHMKHFHGIEFQPSEVCPR 60

Query: 64  NFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPLMED 123
           NFIIFD TD+RSQIMFHPAIA+K S P  NM + Y+  NF    E N ++REISS L ED
Sbjct: 61  NFIIFDQTDHRSQIMFHPAIAHKFSSPGLNMGTAYVPGNFG-GKERNIEAREISSTLRED 120

Query: 124 LDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFNPVH 183
            DDIDALLSLE+++ +    Y++EE+STAR++ NYG+ SP+S S+Y S+ +KN+S + +H
Sbjct: 121 SDDIDALLSLEEDEQK----YDEEEVSTARTYGNYGSSSPESCSNYGSKTKKNRSSSSIH 180

Query: 184 KLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLG 243
           + S    SSCN + K+ K+KKMVR L+ I+PGG QMTTVTVLDEAV+YLKSLK EVQKLG
Sbjct: 181 RSSDGASSSCNDERKRQKMKKMVRALKGIVPGGNQMTTVTVLDEAVQYLKSLKVEVQKLG 240

Query: 244 VGGLEN 250
           VG + +
Sbjct: 241 VGNIRD 241

[Close]

BLAST of CmaCh03G013840 vs. TrEMBL
Match: A0A126G8R8_MORAL (Basic helix-loop-helix 144-like protein transcript variant 1 OS=Morus alba PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.5e-62
Identity = 135/246 (54.88%), Postives = 180/246 (73.17%), Query Frame = 1


Query: 4   MQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEVCPQ 63
           MQ+D   Y +    P   Q G+N+M IP++ A+ + LP G  ++  F+ +EFQPSEVCP+
Sbjct: 1   MQNDNQFYPEMKAPPLEYQMGNNYMHIPVAPAYGADLPPGPMHMKHFHGIEFQPSEVCPR 60

Query: 64  NFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPLMED 123
           NFIIFD TD+RSQIMFHPAIA+K S P  NM + Y+  NF    E + ++REISS L ED
Sbjct: 61  NFIIFDQTDHRSQIMFHPAIAHKFSSPGLNMGTAYVPGNFG-GKERSIEAREISSTLRED 120

Query: 124 LDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFNPVH 183
            DDIDALLSLE+++ +    Y++EE+STAR++ NYG+ SP+S S+Y S+ +KN+S + +H
Sbjct: 121 SDDIDALLSLEEDEQK----YDEEEVSTARTYGNYGSSSPESCSNYGSKTKKNRSSSSIH 180

Query: 184 KLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLG 243
           + S    SSCN + K+ K+KKMVR L+ I+PGG QMTTVTVLDEAV+YLKSLK EVQKLG
Sbjct: 181 RSSDGASSSCNDERKRQKMKKMVRALKGIVPGGNQMTTVTVLDEAVQYLKSLKVEVQKLG 240

Query: 244 VGGLEN 250
           VG L +
Sbjct: 241 VGNLRD 241

[Close]

BLAST of CmaCh03G013840 vs. TrEMBL
Match: M5WH37_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010624mg PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.8e-62
Identity = 135/246 (54.88%), Postives = 180/246 (73.17%), Query Frame = 1


Query: 4   MQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEVCPQ 63
           MQ D          P ANQ G+N+M IP++SA  +VLP    ++ PF+ VEFQ S++CP+
Sbjct: 1   MQRDQQFDPNKAAPPFANQVGNNYMHIPVASARGAVLPHEAKHIKPFHGVEFQTSDICPK 60

Query: 64  NFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPLMED 123
           NFIIFD TD+RSQIMF+PAIA+K++GP  N+C+ YIQ N  +N+ +N+D RE SS L ED
Sbjct: 61  NFIIFDQTDHRSQIMFNPAIAHKITGPAFNICAAYIQDNLGLNEGNNED-RETSSSLKED 120

Query: 124 LDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFNPVH 183
            DDIDALLSLE+   E+++ Y++EE+STAR+H NYG+ SPDS S+Y  + +KN+  + + 
Sbjct: 121 SDDIDALLSLEE---EELEEYDEEEVSTARTHGNYGSMSPDSCSNYGLKTKKNRQCSSLG 180

Query: 184 KLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLG 243
           K S  G SSCNS+ K+ K+KKMVR LR I+PGG +M TV VLDEAV+YLKSLK E+Q LG
Sbjct: 181 KSSGIGSSSCNSERKRQKMKKMVRVLRGIVPGGNEMNTVDVLDEAVQYLKSLKVELQNLG 240

Query: 244 VGGLEN 250
           V  L +
Sbjct: 241 VENLND 242

[Close]

BLAST of CmaCh03G013840 vs. TAIR10
Match: AT1G29950.1 (AT1G29950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 105/252 (41.67%), Postives = 150/252 (59.52%), Query Frame = 1


Query: 12  LKNTMLPT-ANQGGDNHMQIPLSS--AFPSVLPTGRNNLGPFNTVEFQPSEVCPQNFIIF 71
           ++N   P  +++ GD +M  P +S  ++ ++ P       P++ VE QPS VCP+NF+IF
Sbjct: 1   MQNNQFPHFSDEVGDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIF 60

Query: 72  DHTDNRSQIMFHPAIANKLSG-PTANMCSKYIQKNFYVNDEHNDDS---REISSPLMEDL 131
           D T +RSQ+M+HP + +KL   P+ N  +   Q N YV   + +     +E+SS   ED 
Sbjct: 61  DQTYDRSQVMYHPELTHKLMNTPSLNNLASTFQ-NEYVGGSYGNYGNYEQEVSSSYQEDP 120

Query: 132 DDIDALLSLED--EDHEDIDGYED----EEISTAR-SHLNYGNQSPDSSSSYSSEPRKNQ 191
           ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  S       N 
Sbjct: 121 NEIDALLSADEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNN 180

Query: 192 SFNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKD 250
           + +    LS S  SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK 
Sbjct: 181 NNSRKQSLSGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKI 240

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: gi|449433686|ref|XP_004134628.1| (PREDICTED: transcription factor bHLH144 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 1.0e-115
Identity = 221/251 (88.05%), Postives = 233/251 (92.83%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLN YLK    PTA QG DNHMQIPLSSAFPSVLP GR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPA+ANKLSGPTANMCSKYIQKNF VND+H++D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHED-REISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSS--YSSEPRKNQS 180
           MEDLDDIDALLSLE+E+HED+DG ED+E+STARSHLNYGNQSPDSSSS  YSS+PRKN S
Sbjct: 121 MEDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 180

Query: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
           FNPVHK SSSG SSCNSD+KQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKSSSSG-SSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 249

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: gi|659078302|ref|XP_008439654.1| (PREDICTED: transcription factor bHLH144 [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 3.8e-115
Identity = 222/251 (88.45%), Postives = 231/251 (92.03%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           MDFMQSDLN YLK    PTA QG DNHMQIPLSSAFPSVLP GR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND H +D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYED-REISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSS--YSSEPRKNQS 180
           MEDLDDIDALLSLE+E+HE +DG ED+E+STARSHLNYGNQSPDSSSS  YSS+PRKN S
Sbjct: 121 MEDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 180

Query: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
           FNPVHK SSSG SSC+SDMKQLK+KKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKSSSSG-SSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 249

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: gi|703102956|ref|XP_010097603.1| (hypothetical protein L484_002862 [Morus notabilis])

HSP 1 Score: 248.8 bits (634), Expect = 9.8e-63
Identity = 138/249 (55.42%), Postives = 180/249 (72.29%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60
           M   Q+D   Y +    P   Q G+N+M IP++ AF + LP G  ++  F+ +EFQPSEV
Sbjct: 332 MQVCQNDNQFYPEMKAPPLEYQMGNNYMHIPVAPAFGADLPPGPMHMKHFHGIEFQPSEV 391

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120
           CP+NFIIFD TD+RSQIMFHPAIA+K S P  NM + Y+  NF    E N ++REISS L
Sbjct: 392 CPRNFIIFDQTDHRSQIMFHPAIAHKFSSPGLNMGTAYVPSNFG-GKETNIEAREISSTL 451

Query: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFN 180
            ED DDIDALLSLE+E+ +    Y++EE+STAR++ NYG+ SP+S S+Y S+ +KN+S +
Sbjct: 452 REDSDDIDALLSLEEEEQK----YDEEEVSTARTYGNYGSSSPESCSNYGSKTKKNRSSS 511

Query: 181 PVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240
            +H+ S    SSCN + K+ K+KKMVR L+ I+PGG QMTTVTVLDEAV+YLKSLK EVQ
Sbjct: 512 SIHRSSDGASSSCNDERKRQKMKKMVRALKGIVPGGNQMTTVTVLDEAVQYLKSLKVEVQ 571

Query: 241 KLGVGGLEN 250
           KLGVG L +
Sbjct: 572 KLGVGNLRD 575

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: gi|923553833|gb|ALB35155.1| (basic helix-loop-helix 144-like protein transcript variant 1 [Morus alba])

HSP 1 Score: 246.5 bits (628), Expect = 4.9e-62
Identity = 135/246 (54.88%), Postives = 180/246 (73.17%), Query Frame = 1


Query: 4   MQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEVCPQ 63
           MQ+D   Y +    P   Q G+N+M IP++ A+ + LP G  ++  F+ +EFQPSEVCP+
Sbjct: 1   MQNDNQFYPEMKAPPLEYQMGNNYMHIPVAPAYGADLPPGPMHMKHFHGIEFQPSEVCPR 60

Query: 64  NFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPLMED 123
           NFIIFD TD+RSQIMFHPAIA+K S P  NM + Y+  NF    E N ++REISS L ED
Sbjct: 61  NFIIFDQTDHRSQIMFHPAIAHKFSSPGLNMGTAYVPGNFG-GKERNIEAREISSTLRED 120

Query: 124 LDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFNPVH 183
            DDIDALLSLE+++ +    Y++EE+STAR++ NYG+ SP+S S+Y S+ +KN+S + +H
Sbjct: 121 SDDIDALLSLEEDEQK----YDEEEVSTARTYGNYGSSSPESCSNYGSKTKKNRSSSSIH 180

Query: 184 KLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLG 243
           + S    SSCN + K+ K+KKMVR L+ I+PGG QMTTVTVLDEAV+YLKSLK EVQKLG
Sbjct: 181 RSSDGASSSCNDERKRQKMKKMVRALKGIVPGGNQMTTVTVLDEAVQYLKSLKVEVQKLG 240

Query: 244 VGGLEN 250
           VG + +
Sbjct: 241 VGNIRD 241

[Close]

BLAST of CmaCh03G013840 vs. NCBI nr
Match: gi|923553857|gb|ALB35157.1| (basic helix-loop-helix 144-like protein transcript variant 1 [Morus alba])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 135/246 (54.88%), Postives = 180/246 (73.17%), Query Frame = 1


Query: 4   MQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEVCPQ 63
           MQ+D   Y +    P   Q G+N+M IP++ A+ + LP G  ++  F+ +EFQPSEVCP+
Sbjct: 1   MQNDNQFYPEMKAPPLEYQMGNNYMHIPVAPAYGADLPPGPMHMKHFHGIEFQPSEVCPR 60

Query: 64  NFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPLMED 123
           NFIIFD TD+RSQIMFHPAIA+K S P  NM + Y+  NF    E + ++REISS L ED
Sbjct: 61  NFIIFDQTDHRSQIMFHPAIAHKFSSPGLNMGTAYVPGNFG-GKERSIEAREISSTLRED 120

Query: 124 LDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSSYSSEPRKNQSFNPVH 183
            DDIDALLSLE+++ +    Y++EE+STAR++ NYG+ SP+S S+Y S+ +KN+S + +H
Sbjct: 121 SDDIDALLSLEEDEQK----YDEEEVSTARTYGNYGSSSPESCSNYGSKTKKNRSSSSIH 180

Query: 184 KLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLG 243
           + S    SSCN + K+ K+KKMVR L+ I+PGG QMTTVTVLDEAV+YLKSLK EVQKLG
Sbjct: 181 RSSDGASSSCNDERKRQKMKKMVRALKGIVPGGNQMTTVTVLDEAVQYLKSLKVEVQKLG 240

Query: 244 VGGLEN 250
           VG L +
Sbjct: 241 VGNLRD 241

The following BLAST results are available for this feature:

BLAST of CmaCh03G013840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH144_ARATH	3.3e-34	41.67	Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144 PE=1 SV=1	[more]

BLAST of CmaCh03G013840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLX4_CUCSA	6.9e-116	88.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522710 PE=4 SV=1	[more]
W9RTH8_9ROSA	6.8e-63	55.42	Uncharacterized protein OS=Morus notabilis GN=L484_002862 PE=4 SV=1	[more]
A0A126G8M8_MORAL	3.4e-62	54.88	Basic helix-loop-helix 144-like protein transcript variant 1 OS=Morus alba PE=4 ...	[more]
A0A126G8R8_MORAL	7.5e-62	54.88	Basic helix-loop-helix 144-like protein transcript variant 1 OS=Morus alba PE=2 ...	[more]
M5WH37_PRUPE	9.8e-62	54.88	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010624mg PE=4 SV=1	[more]

BLAST of CmaCh03G013840 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29950.1	1.8e-35	41.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmaCh03G013840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433686\|ref\|XP_004134628.1\|	1.0e-115	88.05	PREDICTED: transcription factor bHLH144 [Cucumis sativus]	[more]
gi\|659078302\|ref\|XP_008439654.1\|	3.8e-115	88.45	PREDICTED: transcription factor bHLH144 [Cucumis melo]	[more]
gi\|703102956\|ref\|XP_010097603.1\|	9.8e-63	55.42	hypothetical protein L484_002862 [Morus notabilis]	[more]
gi\|923553833\|gb\|ALB35155.1\|	4.9e-62	54.88	basic helix-loop-helix 144-like protein transcript variant 1 [Morus alba]	[more]
gi\|923553857\|gb\|ALB35157.1\|	1.1e-61	54.88	basic helix-loop-helix 144-like protein transcript variant 1 [Morus alba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G013840.1	CmaCh03G013840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 201..242 score: 2.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 186..235 score: 8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 201..243 score: 3.2
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 16..243 score: 6.3
None	No IPR available	PANTHER	PTHR12565:SF155	TRANSCRIPTION FACTOR BHLH144	coord: 16..243 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G013840	Cucsa.047570	Cucumber (Gy14) v1	cgycmaB0045
CmaCh03G013840	Cla009755	Watermelon (97103) v1	cmawmB628
CmaCh03G013840	Csa6G522710	Cucumber (Chinese Long) v2	cmacuB678
CmaCh03G013840	MELO3C007151	Melon (DHL92) v3.5.1	cmameB618
CmaCh03G013840	CSPI06G36100	Wild cucumber (PI 183967)	cmacpiB686
CmaCh03G013840	CmoCh07G001270	Cucurbita moschata (Rifu)	cmacmoB672
CmaCh03G013840	MELO3C007151.2	Melon (DHL92) v3.6.1	cmamedB704
CmaCh03G013840	CsaV3_6G051560	Cucumber (Chinese Long) v3	cmacucB0807
CmaCh03G013840	Cla97C01G024370	Watermelon (97103) v2	cmawmbB667
CmaCh03G013840	Bhi03G000053	Wax gourd	cmawgoB0789

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G013840	Cucurbita maxima (Rimu)	cmacmaB232
CmaCh03G013840	Cucurbita maxima (Rimu)	cmacmaB397
CmaCh03G013840	Cucurbita maxima (Rimu)	cmacmaB528
CmaCh03G013840	Cucumber (Gy14) v1	cgycmaB0618
CmaCh03G013840	Cucurbita moschata (Rifu)	cmacmoB638
CmaCh03G013840	Cucurbita moschata (Rifu)	cmacmoB644
CmaCh03G013840	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G013840	Wild cucumber (PI 183967)	cmacpiB655
CmaCh03G013840	Cucumber (Chinese Long) v2	cmacuB650
CmaCh03G013840	Melon (DHL92) v3.5.1	cmameB592
CmaCh03G013840	Watermelon (Charleston Gray)	cmawcgB576
CmaCh03G013840	Watermelon (Charleston Gray)	cmawcgB583
CmaCh03G013840	Watermelon (97103) v1	cmawmB622
CmaCh03G013840	Cucurbita pepo (Zucchini)	cmacpeB653
CmaCh03G013840	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G013840	Cucurbita pepo (Zucchini)	cmacpeB667
CmaCh03G013840	Cucurbita pepo (Zucchini)	cmacpeB675
CmaCh03G013840	Bottle gourd (USVL1VR-Ls)	cmalsiB602
CmaCh03G013840	Bottle gourd (USVL1VR-Ls)	cmalsiB606
CmaCh03G013840	Cucumber (Gy14) v2	cgybcmaB127
CmaCh03G013840	Cucumber (Gy14) v2	cgybcmaB830
CmaCh03G013840	Melon (DHL92) v3.6.1	cmamedB677
CmaCh03G013840	Silver-seed gourd	carcmaB0763
CmaCh03G013840	Silver-seed gourd	carcmaB1111
CmaCh03G013840	Cucumber (Chinese Long) v3	cmacucB0776
CmaCh03G013840	Watermelon (97103) v2	cmawmbB682
CmaCh03G013840	Wax gourd	cmawgoB0808