CmoCh07G001270 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G001270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transcription factor bHLH144, putative
Location	Cmo_Chr07 : 697827 .. 698525 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTCATGCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAACCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTTCCCAAAATTTCATCATCTTTGACCACACGGACGATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAACTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATTGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGTCTCGGGAGCTTGGAGAACTAA

mRNA sequence

ATGGACTTCATGCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAACCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTTCCCAAAATTTCATCATCTTTGACCACACGGACGATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAACTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATTGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGTCTCGGGAGCTTGGAGAACTAA

Coding sequence (CDS)

ATGGACTTCATGCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAACCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTTCCCAAAATTTCATCATCTTTGACCACACGGACGATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAACTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATTGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGTCTCGGGAGCTTGGAGAACTAA

Homology

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BLAST of CmoCh07G001270 vs. Swiss-Prot
Match: BH144_ARATH (Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-32
Identity = 93/233 (39.91%), Postives = 135/233 (57.94%), Query Frame = 1


Query: 27  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQNFIIFDHTDDRSQIMFHPAICNK 86
           H      S++ ++ PP  K   P++ VE QPS +C +NF+IFD T DRSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 87  L------------------GGPTANYE--DREIPSPLMEDEDDIDALLSLED--EDHEDV 146
           L                  GG   NY   ++E+ S   ED ++IDALLS ++  E+++D 
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYEENDDN 138

Query: 147 DGSED----DEINSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGD 206
           +G ED    +E+++AR S  +YGN + +S  SSY      N +      + S+ SS +  
Sbjct: 139 EGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNNDG 198

Query: 207 MKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
             + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 KGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of CmoCh07G001270 vs. TrEMBL
Match: A0A0A0KLX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522710 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.2e-99
Identity = 193/249 (77.51%), Postives = 212/249 (85.14%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLN YLK+A  PTA QGD +HMQIPLSSAFPSVLPPGRKNLGPFN VEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTAN----------------YEDREIPSPLM 120
           C QNFIIFDHTD+RSQIMFHPA+ NKL GPTAN                +EDREI SPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 120

Query: 121 EDEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSS-YSSKPRKNQSV 180
           ED DDIDALLSLE+E+HED+DGSEDDE+++ARS LNYGN+SPDSSSSS YSSKPRKN S 
Sbjct: 121 EDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 181 NPVHTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQ 233
           NPVH + SSGSSC+ D+KQLKLKKMV+KLREILPGGYQMTT  VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 240

[Close]

BLAST of CmoCh07G001270 vs. TrEMBL
Match: A5AUF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036406 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.6e-51
Identity = 125/243 (51.44%), Postives = 161/243 (66.26%), Query Frame = 1


Query: 4   MQSDLNCYLKEAMLPTANQGDGDHM-QIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICS 63
           MQ D     ++ MLP AN+   D+M   P+ SAF +V PPG K+LGPF+ VEFQPS++C 
Sbjct: 46  MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 105

Query: 64  QNFIIFDHTDDRSQIMFHPAICNKLGGPTA---------NYEDREI-------PSPLMED 123
           +NFIIFD TD RSQIMFHPAI  K   P+          N E REI        S L ED
Sbjct: 106 KNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKED 165

Query: 124 EDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPV 183
            +DIDALLSLE+ED E+ D   ++E+++AR+  NYG+   D + SSY SKPRK +  + +
Sbjct: 166 SEDIDALLSLEEEDQEEYD---EEEVSTARTHGNYGSNCED-TCSSYGSKPRKIKLSSSI 225

Query: 184 HTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELG 230
             + SSGSSC+ + K+ K+KKMVK LR I+PG  QM T  VLDEAV+YLKSLK EVQ+LG
Sbjct: 226 LKSSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLG 284

[Close]

BLAST of CmoCh07G001270 vs. TrEMBL
Match: F6HMI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g02940 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.6e-51
Identity = 125/243 (51.44%), Postives = 161/243 (66.26%), Query Frame = 1


Query: 4   MQSDLNCYLKEAMLPTANQGDGDHM-QIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICS 63
           MQ D     ++ MLP AN+   D+M   P+ SAF +V PPG K+LGPF+ VEFQPS++C 
Sbjct: 1   MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 60

Query: 64  QNFIIFDHTDDRSQIMFHPAICNKLGGPTA---------NYEDREI-------PSPLMED 123
           +NFIIFD TD RSQIMFHPAI  K   P+          N E REI        S L ED
Sbjct: 61  KNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKED 120

Query: 124 EDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPV 183
            +DIDALLSLE+ED E+ D   ++E+++AR+  NYG+   D + SSY SKPRK +  + +
Sbjct: 121 SEDIDALLSLEEEDQEEYD---EEEVSTARTHGNYGSNCED-TCSSYGSKPRKIKLSSSI 180

Query: 184 HTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELG 230
             + SSGSSC+ + K+ K+KKMVK LR I+PG  QM T  VLDEAV+YLKSLK EVQ+LG
Sbjct: 181 LKSSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLG 239

[Close]

BLAST of CmoCh07G001270 vs. TrEMBL
Match: B9S150_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0633820 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-50
Identity = 121/244 (49.59%), Postives = 164/244 (67.21%), Query Frame = 1


Query: 4   MQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQ 63
           MQSD +   K+A+   ANQ   ++M +P++S+FP+  P   K+L P + +EFQPSE+C +
Sbjct: 1   MQSDQHFRRKKAVPHFANQRGNNYMHVPVASSFPAAPPTAAKHLMPVHGIEFQPSEVCPK 60

Query: 64  NFIIFDHTDDRSQIMFHPAICNKLGGP---------TANYEDREIP------SPLMEDED 123
           NFIIFD TD RSQIMFHP + ++  GP           NYE   +       S L ED D
Sbjct: 61  NFIIFDQTDHRSQIMFHPTVAHRFNGPGLNMHASYFQENYEREAVDDTGREMSSLKEDSD 120

Query: 124 DIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHT 183
           DIDALLSLE+E+ ++ D   ++E+++AR+  NYG+ SPD S S+Y SKPRK  S + V  
Sbjct: 121 DIDALLSLEEEEQDECD---EEEVSTARTYGNYGSSSPD-SCSTYGSKPRKTGS-SSVQK 180

Query: 184 ALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLG 233
           +  SGSSC  + K+ K+KKMVK LR I+PGG QM T  VLDEAV+YLKSLK EVQ++G+G
Sbjct: 181 SPGSGSSCSTERKRQKMKKMVKALRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKIGVG 239

[Close]

BLAST of CmoCh07G001270 vs. TrEMBL
Match: B9I102_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s02710g PE=4 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 6.8e-49
Identity = 121/245 (49.39%), Postives = 158/245 (64.49%), Query Frame = 1


Query: 4   MQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQ 63
           M SD     KEAM P  NQ D ++M  P+++ F +V P   K+L P + +EFQ SEIC +
Sbjct: 1   MHSDRYFRSKEAMPPLTNQVDNNNMHFPVATTFAAVQPLAAKHLMPVHGIEFQSSEICPR 60

Query: 64  NFIIFDHTDDRSQIMFHPAICNKLGGPTANYE----------------DREIPSPLMEDE 123
           NFIIFD  D RSQ+M++PA+ +  GGP  N                  +REI S L ED 
Sbjct: 61  NFIIFDQADHRSQVMYNPAVAHNHGGPDFNIHATYIQENFERTDTYNVEREISSSLKEDS 120

Query: 124 DDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVH 183
           DDIDAL+SLE+E+ E+ DG   +E+++AR+  NYG+ SPD S SSY +KP KN S   V 
Sbjct: 121 DDIDALMSLEEEEPEECDG---EEVSTARTCRNYGSSSPD-SCSSYGAKPMKNGS--SVQ 180

Query: 184 TALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGL 233
              SSGSS + + K+ K+K MVK LR I+PGG QM T  VLDEAV+YLKSLK EVQ+LG+
Sbjct: 181 KCSSSGSSSNSERKRQKMKTMVKTLRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKLGV 239

[Close]

BLAST of CmoCh07G001270 vs. TAIR10
Match: AT1G29950.1 (AT1G29950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33
Identity = 93/233 (39.91%), Postives = 135/233 (57.94%), Query Frame = 1


Query: 27  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQNFIIFDHTDDRSQIMFHPAICNK 86
           H      S++ ++ PP  K   P++ VE QPS +C +NF+IFD T DRSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 87  L------------------GGPTANYE--DREIPSPLMEDEDDIDALLSLED--EDHEDV 146
           L                  GG   NY   ++E+ S   ED ++IDALLS ++  E+++D 
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYEENDDN 138

Query: 147 DGSED----DEINSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGD 206
           +G ED    +E+++AR S  +YGN + +S  SSY      N +      + S+ SS +  
Sbjct: 139 EGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNNDG 198

Query: 207 MKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 233
             + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 KGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: gi|659078302|ref|XP_008439654.1| (PREDICTED: transcription factor bHLH144 [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 2.1e-99
Identity = 195/249 (78.31%), Postives = 210/249 (84.34%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLN YLK+A  PTA QGD +HMQIPLSSAFPSVLPPGRKNLGPFN VEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTAN----------------YEDREIPSPLM 120
           C QNFIIFDHTD+RSQIMFHPAI NKL GPTAN                YEDREI SPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 121 EDEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSS-YSSKPRKNQSV 180
           ED DDIDALLSLE+E+HE +DGSEDDE+++ARS LNYGN+SPDSSSSS YSSKPRKN S 
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 181 NPVHTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQ 233
           NPVH + SSGSSC  DMKQLKLKKMV+KLREILPGGYQMTT  VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: gi|449433686|ref|XP_004134628.1| (PREDICTED: transcription factor bHLH144 [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 4.6e-99
Identity = 193/249 (77.51%), Postives = 212/249 (85.14%), Query Frame = 1


Query: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60
           MDFMQSDLN YLK+A  PTA QGD +HMQIPLSSAFPSVLPPGRKNLGPFN VEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTAN----------------YEDREIPSPLM 120
           C QNFIIFDHTD+RSQIMFHPA+ NKL GPTAN                +EDREI SPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 120

Query: 121 EDEDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSS-YSSKPRKNQSV 180
           ED DDIDALLSLE+E+HED+DGSEDDE+++ARS LNYGN+SPDSSSSS YSSKPRKN S 
Sbjct: 121 EDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 181 NPVHTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQ 233
           NPVH + SSGSSC+ D+KQLKLKKMV+KLREILPGGYQMTT  VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 240

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: gi|147767796|emb|CAN76054.1| (hypothetical protein VITISV_036406 [Vitis vinifera])

HSP 1 Score: 209.1 bits (531), Expect = 8.0e-51
Identity = 125/243 (51.44%), Postives = 161/243 (66.26%), Query Frame = 1


Query: 4   MQSDLNCYLKEAMLPTANQGDGDHM-QIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICS 63
           MQ D     ++ MLP AN+   D+M   P+ SAF +V PPG K+LGPF+ VEFQPS++C 
Sbjct: 46  MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 105

Query: 64  QNFIIFDHTDDRSQIMFHPAICNKLGGPTA---------NYEDREI-------PSPLMED 123
           +NFIIFD TD RSQIMFHPAI  K   P+          N E REI        S L ED
Sbjct: 106 KNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKED 165

Query: 124 EDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPV 183
            +DIDALLSLE+ED E+ D   ++E+++AR+  NYG+   D + SSY SKPRK +  + +
Sbjct: 166 SEDIDALLSLEEEDQEEYD---EEEVSTARTHGNYGSNCED-TCSSYGSKPRKIKLSSSI 225

Query: 184 HTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELG 230
             + SSGSSC+ + K+ K+KKMVK LR I+PG  QM T  VLDEAV+YLKSLK EVQ+LG
Sbjct: 226 LKSSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLG 284

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: gi|225463438|ref|XP_002275393.1| (PREDICTED: transcription factor bHLH144 [Vitis vinifera])

HSP 1 Score: 209.1 bits (531), Expect = 8.0e-51
Identity = 125/243 (51.44%), Postives = 161/243 (66.26%), Query Frame = 1


Query: 4   MQSDLNCYLKEAMLPTANQGDGDHM-QIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICS 63
           MQ D     ++ MLP AN+   D+M   P+ SAF +V PPG K+LGPF+ VEFQPS++C 
Sbjct: 1   MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 60

Query: 64  QNFIIFDHTDDRSQIMFHPAICNKLGGPTA---------NYEDREI-------PSPLMED 123
           +NFIIFD TD RSQIMFHPAI  K   P+          N E REI        S L ED
Sbjct: 61  KNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKED 120

Query: 124 EDDIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPV 183
            +DIDALLSLE+ED E+ D   ++E+++AR+  NYG+   D + SSY SKPRK +  + +
Sbjct: 121 SEDIDALLSLEEEDQEEYD---EEEVSTARTHGNYGSNCED-TCSSYGSKPRKIKLSSSI 180

Query: 184 HTALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELG 230
             + SSGSSC+ + K+ K+KKMVK LR I+PG  QM T  VLDEAV+YLKSLK EVQ+LG
Sbjct: 181 LKSSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLG 239

[Close]

BLAST of CmoCh07G001270 vs. NCBI nr
Match: gi|1000965523|ref|XP_015575001.1| (PREDICTED: transcription factor bHLH144 [Ricinus communis])

HSP 1 Score: 207.6 bits (527), Expect = 2.3e-50
Identity = 121/244 (49.59%), Postives = 164/244 (67.21%), Query Frame = 1


Query: 4   MQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICSQ 63
           MQSD +   K+A+   ANQ   ++M +P++S+FP+  P   K+L P + +EFQPSE+C +
Sbjct: 1   MQSDQHFRRKKAVPHFANQRGNNYMHVPVASSFPAAPPTAAKHLMPVHGIEFQPSEVCPK 60

Query: 64  NFIIFDHTDDRSQIMFHPAICNKLGGP---------TANYEDREIP------SPLMEDED 123
           NFIIFD TD RSQIMFHP + ++  GP           NYE   +       S L ED D
Sbjct: 61  NFIIFDQTDHRSQIMFHPTVAHRFNGPGLNMHASYFQENYEREAVDDTGREMSSLKEDSD 120

Query: 124 DIDALLSLEDEDHEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHT 183
           DIDALLSLE+E+ ++ D   ++E+++AR+  NYG+ SPD S S+Y SKPRK  S + V  
Sbjct: 121 DIDALLSLEEEEQDECD---EEEVSTARTYGNYGSSSPD-SCSTYGSKPRKTGS-SSVQK 180

Query: 184 ALSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLG 233
           +  SGSSC  + K+ K+KKMVK LR I+PGG QM T  VLDEAV+YLKSLK EVQ++G+G
Sbjct: 181 SPGSGSSCSTERKRQKMKKMVKALRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKIGVG 239

The following BLAST results are available for this feature:

BLAST of CmoCh07G001270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH144_ARATH	3.7e-32	39.91	Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144 PE=1 SV=1	[more]

BLAST of CmoCh07G001270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLX4_CUCSA	3.2e-99	77.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522710 PE=4 SV=1	[more]
A5AUF1_VITVI	5.6e-51	51.44	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036406 PE=4 SV=1	[more]
F6HMI0_VITVI	5.6e-51	51.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g02940 PE=4 SV=...	[more]
B9S150_RICCO	1.6e-50	49.59	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0633820 PE=4 SV=1	[more]
B9I102_POPTR	6.8e-49	49.39	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s02710g PE=4 SV=2	[more]

BLAST of CmoCh07G001270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29950.1	2.1e-33	39.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmoCh07G001270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078302\|ref\|XP_008439654.1\|	2.1e-99	78.31	PREDICTED: transcription factor bHLH144 [Cucumis melo]	[more]
gi\|449433686\|ref\|XP_004134628.1\|	4.6e-99	77.51	PREDICTED: transcription factor bHLH144 [Cucumis sativus]	[more]
gi\|147767796\|emb\|CAN76054.1\|	8.0e-51	51.44	hypothetical protein VITISV_036406 [Vitis vinifera]	[more]
gi\|225463438\|ref\|XP_002275393.1\|	8.0e-51	51.44	PREDICTED: transcription factor bHLH144 [Vitis vinifera]	[more]
gi\|1000965523\|ref\|XP_015575001.1\|	2.3e-50	49.59	PREDICTED: transcription factor bHLH144 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G001270.1	CmoCh07G001270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 184..225 score: 6.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 184..226 score: 2.8
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 16..226 score: 6.4
None	No IPR available	PANTHER	PTHR12565:SF155	TRANSCRIPTION FACTOR BHLH144	coord: 16..226 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G001270	Cucsa.047570	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G001270	CmaCh03G013840	Cucurbita maxima (Rimu)	cmacmoB672
CmoCh07G001270	CmaCh07G001260	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G001270	Cla009755	Watermelon (97103) v1	cmowmB816
CmoCh07G001270	Csa6G522710	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G001270	MELO3C007151	Melon (DHL92) v3.5.1	cmomeB782
CmoCh07G001270	CSPI06G36100	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G001270	Lsi01G001670	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G001270	MELO3C007151.2	Melon (DHL92) v3.6.1	cmomedB886
CmoCh07G001270	CsaV3_6G051560	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G001270	Cla97C01G024370	Watermelon (97103) v2	cmowmbB849
CmoCh07G001270	Bhi03G000053	Wax gourd	cmowgoB1062
CmoCh07G001270	Carg15398	Silver-seed gourd	carcmoB0745
CmoCh07G001270	Carg23073	Silver-seed gourd	carcmoB1281

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G001270	CmoCh03G013770	Cucurbita moschata (Rifu)	cmocmoB459

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G001270	Watermelon (97103) v2	cmowmbB857
CmoCh07G001270	Wax gourd	cmowgoB1074
CmoCh07G001270	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh07G001270	Cucurbita moschata (Rifu)	cmocmoB350
CmoCh07G001270	Cucumber (Gy14) v1	cgycmoB0620
CmoCh07G001270	Cucurbita maxima (Rimu)	cmacmoB240
CmoCh07G001270	Cucurbita maxima (Rimu)	cmacmoB429
CmoCh07G001270	Wild cucumber (PI 183967)	cmocpiB844
CmoCh07G001270	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G001270	Cucumber (Chinese Long) v2	cmocuB834
CmoCh07G001270	Melon (DHL92) v3.5.1	cmomeB771
CmoCh07G001270	Watermelon (Charleston Gray)	cmowcgB760
CmoCh07G001270	Watermelon (97103) v1	cmowmB809
CmoCh07G001270	Cucurbita pepo (Zucchini)	cmocpeB798
CmoCh07G001270	Cucurbita pepo (Zucchini)	cmocpeB801
CmoCh07G001270	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G001270	Cucurbita pepo (Zucchini)	cmocpeB818
CmoCh07G001270	Bottle gourd (USVL1VR-Ls)	cmolsiB783
CmoCh07G001270	Cucumber (Gy14) v2	cgybcmoB132
CmoCh07G001270	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G001270	Melon (DHL92) v3.6.1	cmomedB875
CmoCh07G001270	Silver-seed gourd	carcmoB0210
CmoCh07G001270	Silver-seed gourd	carcmoB1083
CmoCh07G001270	Cucumber (Chinese Long) v3	cmocucB0988