CmaCh02G000020 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATACCCAAGCCCAACCCAACTCGTCTCCCTCACTTCAACTCTCTCTCTCTCTCTCATCTTACACCGCCGGCAACTTCTCGAATTGCTTCTCTGCAATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAACATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAGTATTTCCTTCTTTTTCATTTTCTATCGTTTCACTTTAGATCGCATTTTCCCTTCACGAGATCGCCAAAAAAGAAAAAAAAAGATGATTTCATTTTGGTTCTTTAATTACTTTAGTTTTGACTGTCATTGGTCGCTTATCTTTTTGGCTTGACATGAAAGAGAGAGGATTCTGCTCAGCTGCATCAATTTATATTGCACGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTGAGGTCTTATTCCTTCAGTTTTATTATTAGATCATCGAGATACCTCTTTTTTCTTCTATTTCCTTTGAAATTCCCTTTAGATTCTTTTTCTTGGTGCGTTTTTTGCAGGTTCTTGAAAGCAGTCGATAGATTCAATGATCTGGTGGTGTCTGTTTATGTAACCGCTGGCCATATCCTTTAATATCGAGGGGGGTTTTACGGGAACAATGTGATGGGAATTGAGTCAAATTTCATCAATTTATTCACTTTTAAAAGATAACTCTAAATTAATAGAAGTTTTACTAGAGCTTTCCCCCGCCTCTTTGGTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATTAATGATTGCCCTTCTCTCTTTTTCCCGGTCCAATATTTGTTCTCGAGAATCTATACCCTCACCACCCCGATTGCATTACTGAAGTATTTATACTGATAAAACGGTTCCAATCCTTTTTTAAGATATTGCAGGCAAAAATTTTCATTGTAATGGGATCAATGTTGTACTATGATTCTGGAATTCTATATACATTTGAGAGATTAAATTCAGTTTATAGTTCCTATTATTTCCTTTTCTGGTTTTTCTTTGACTATTCACTACATACGCGATTGATGTTACTTCATGACTCTCGCAATGATGATGGAATCAAGAGTTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGGTAAGTTTGACATGTTTCTTAGGTATTATTATTATTATTATTGCTATTTTGGAAGGTTTAATGCTTGATTTACTATGGTATATTACTTAGGTTGAGTGAACTGTACCTCATTTGATTAGATCCCACTAGATAGAGTTCATTCTTTTCCCTCAAATATACTGAATTTTGACATTTGGAATGGTACAGTTGTTAAATAAATAAATAAATTGTATCCCTTGAGTCTTAACTGTATATATTGATCAAAAAGAGTAAGTGGTTGATTTGTTATGAGTTCAGGTTGTCATCTTGAGTTTGCATGAAGCTTGAGATAGGGGTGGCAAGGATGGTTCATTTTTTTGATCCCTTGTTGTTTGGTCGTGTCAGGATGCTCAGATTCATGGCTCCTCTAGATTCCTTTAATGTGTTATTATTGTCTCTGTAGCACAGGATTGTGAACTATTTCTTCTAAGGAAATTAATTGGCTTTGGAAATAAAATCGATAGAATGATTTGAAATCGTGTAGTAAAGTTACAAAATATTGTTAATAATTTATCGAGTGGATTTACGTGTTTGTCCCATGAATTTGTTGAGGTGCACTAAGAGGGTCCGGACACTCACAGATATATGAAGAAAAAAAAAATCTAATGGGTTAAAGATAAGATTTCATCATCATAATTTAATTGCTGAAAGAACTATTTGTAGAAAAGCTATGTTTGGAACATACCAGATTTAATATCCTCTAACAGTGTACTTCAGCATTATGCTCGACTTGATTACATCACATTGAACAAAATGTAAGTGATAAAGATTTCCCGGTAACTTGTCTGTCATCTTCTCCTGATATATGATTCAATTAGCCAATCAAACTTTGAATTCTTGATGCTTTCTTGAATAGTAAGAAAGTGGTGTCAAGAGGGGAGTGTAATTGTTGTTCTGCTGATTTCTATCTGCTGTCATAATAGTATGATCCGGAGTACCACCCATCCCCAGCACTACGTACTTTTCCATTGGAAAAAATTTACCAATCAATGTATGGTATGCCTTTAATCAGCTATTCTGCTAATGAAATTAAATATTTCCTTGATTATTCTACATTGAGTTTCCAATACGAGAACTTCTGTGACTCCTCTCCTTCATTTATTATTATTTTCTCTTTTGGTTTTTTAGTGCACTGTTAGTTGGTATTCCTATCAAGTTTTGTAAGTTTCATCTAGTTAGGATTTCAAAACCTTTAATTCACGTTTAGCACTACATTAGATAAAAGGTTTGACACTTTGGTTTGGTCTCCGTTAGTCTACTCTGTACTATATTTGAAACTTAGTGAATGATGTAACATTGTTGTTGCAAAGATTTTGACGAGAGTGATTAAATTTTGTGGAATATTTTTATATTATTTATCCATTCCATTTGACAGGAAAGGAAAAGGAGACTTAGCTCTTGATTCCTGGCAATTTCCGTAGTACATACTTTCTCACAGCAAAGATATTAAACTCTTTCCAGGAAAAAATTTCCTAGAAAGTCCTTGGGAAATTTGATTAGAGCCTCACCTCTTCTTTTCCTATGTTATGTGCATGTATAAGTACACTATTTCCAATTTTTGGAAACTCTATCACCACTGTCAACCTTTTTGTGAGAATTTCGACTGAAGTTATTAAACTTTGGATAATTGTTCCAGTTATGTGTATATAAAAAAATTTATTTCCTTGGATGTCTTTCAGCTTTAAATCAAATTTACTTGAATTTCATCTATCGGATGAAATCAAAGTTAATTAGTTCAAGACAATTAAACGTCGGTTAACCATTTGTTAGTTGATGGGCTCTGGTCTTTTTTGTACTCCCCATGTTTCCAATGAATGACTGTGACCTGAACCTTGTTGTCTTCCAAATTCTTTTTCTCTATTGTTGCTACGGGAATTCATTTGGTGGCAATTGTCAGTTTGATAATGCTCATGATGTTAAATGGCTTTGTGAATTTGCAGACTATACTTAATCCCCTCTACTTGCCTGGATCCCGCATCACATCTTCACATTTCGACACAAAAGTTCGTGCACTTGCGAGGAAGTATCTCTAG ATACCCAAGCCCAACCCAACTCGTCTCCCTCACTTCAACTCTCTCTCTCTCTCTCATCTTACACCGCCGGCAACTTCTCGAATTGCTTCTCTGCAATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAACATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAATTTATATTGCACGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCTTGAAAGCAGTCGATAGATTCAATGATCTGGTGGTGTCTGTTTATGTAACCGCTGGCCATACGCGATTGATGTTACTTCATGACTCTCGCAATGATGATGGAATCAAGAGTTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGACTATACTTAATCCCCTCTACTTGCCTGGATCCCGCATCACATCTTCACATTTCGACACAAAAGTTCGTGCACTTGCGAGGAAGTATCTCTAG ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAACATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAATTTATATTGCACGCGTCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCTTGAAAGCAGTCGATAGATTCAATGATCTGGTGGTGTCTGTTTATGTAACCGCTGGCCATACGCGATTGATGTTACTTCATGACTCTCGCAATGATGATGGAATCAAGAGTTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGACTATACTTAATCCCCTCTACTTGCCTGGATCCCGCATCACATCTTCACATTTCGACACAAAAGTTCGTGCACTTGCGAGGAAGTATCTCTAG MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
BLAST of CmaCh02G000020 vs. Swiss-Prot
Match: TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAPPC2 PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31 Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of CmaCh02G000020 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31 Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of CmaCh02G000020 vs. Swiss-Prot
Match: TRS20_SCHPO (Transport protein particle 20 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trs20 PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31 Identity = 63/135 (46.67%), Postives = 95/135 (70.37%), Query Frame = 1
BLAST of CmaCh02G000020 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31 Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of CmaCh02G000020 vs. Swiss-Prot
Match: TPPC2_MOUSE (Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.4e-31 Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of CmaCh02G000020 vs. TrEMBL
Match: M5XZB8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013209mg PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67 Identity = 128/135 (94.81%), Postives = 135/135 (100.00%), Query Frame = 1
BLAST of CmaCh02G000020 vs. TrEMBL
Match: A0A061EJF7_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 4.2e-67 Identity = 128/135 (94.81%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of CmaCh02G000020 vs. TrEMBL
Match: A0A061EID8_THECC (SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 5.5e-67 Identity = 128/135 (94.81%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of CmaCh02G000020 vs. TrEMBL
Match: V4U1H0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022803mg PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 7.2e-67 Identity = 128/135 (94.81%), Postives = 132/135 (97.78%), Query Frame = 1
BLAST of CmaCh02G000020 vs. TrEMBL
Match: A0A0R0KH89_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G207300 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 2.1e-66 Identity = 127/135 (94.07%), Postives = 134/135 (99.26%), Query Frame = 1
BLAST of CmaCh02G000020 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein) HSP 1 Score: 256.9 bits (655), Expect = 6.9e-69 Identity = 125/135 (92.59%), Postives = 132/135 (97.78%), Query Frame = 1
BLAST of CmaCh02G000020 vs. TAIR10
Match: AT2G20930.1 (AT2G20930.1 SNARE-like superfamily protein) HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09 Identity = 37/138 (26.81%), Postives = 66/138 (47.83%), Query Frame = 1
BLAST of CmaCh02G000020 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 5.0e-69 Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 1
BLAST of CmaCh02G000020 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo]) HSP 1 Score: 267.3 bits (682), Expect = 1.4e-68 Identity = 133/135 (98.52%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of CmaCh02G000020 vs. NCBI nr
Match: gi|778670342|ref|XP_011649448.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus]) HSP 1 Score: 264.2 bits (674), Expect = 1.2e-67 Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 1
BLAST of CmaCh02G000020 vs. NCBI nr
Match: gi|596289200|ref|XP_007226059.1| (hypothetical protein PRUPE_ppa013209mg [Prunus persica]) HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67 Identity = 128/135 (94.81%), Postives = 135/135 (100.00%), Query Frame = 1
BLAST of CmaCh02G000020 vs. NCBI nr
Match: gi|694325676|ref|XP_009353773.1| (PREDICTED: trafficking protein particle complex subunit 2-like [Pyrus x bretschneideri]) HSP 1 Score: 262.3 bits (669), Expect = 4.6e-67 Identity = 128/135 (94.81%), Postives = 134/135 (99.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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